AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040454.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040454.01.T01 MTR_7g089540 83.424 368 19 4 1 334 1 360 0.0 592
MsG0780040454.01.T01 MTR_7g055923 61.682 107 41 0 224 330 19 125 1.72e-47 157
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040454.01.T01 AT4G18593 60.748 107 37 2 224 330 27 128 2.41e-45 152
MsG0780040454.01.T01 AT4G18593 60.748 107 37 2 224 330 27 128 2.41e-45 152

Find 130 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATATTTAGCTTATAGTTAA+TGG 0.127766 7:-77814631 MsG0780040454.01.T01:three_prime_UTR
GATTCATTAGACTTGTTAAA+AGG 0.260913 7:+77815592 None:intergenic
GATTATTATACAACTCTATT+AGG 0.268265 7:+77814484 None:intergenic
CCCGTTTGGGATACTTCAAT+TGG 0.323463 7:-77815170 MsG0780040454.01.T01:CDS
CCGTAGAGGCTCAATAAATA+TGG 0.345431 7:+77815558 None:intergenic
TGCTCATTGTGATGCCCGTT+TGG 0.347710 7:-77815184 MsG0780040454.01.T01:CDS
TGGTGGTGGTGCTGGTGGTT+TGG 0.370043 7:+77819082 None:intergenic
ATATTATCCTATCTATTATA+TGG 0.370188 7:-77814441 MsG0780040454.01.T01:three_prime_UTR
GGGGACGGTGGTGGTGGTGC+TGG 0.370565 7:+77819074 None:intergenic
GTTTCGCTGGTGTTTCTAGA+AGG 0.372534 7:-77818738 MsG0780040454.01.T01:CDS
GGGGAGGGTGAGACATCCTT+TGG 0.382903 7:-77815640 MsG0780040454.01.T01:CDS
AGAACCTGAATGTTCTTGTT+AGG 0.383393 7:-77814718 MsG0780040454.01.T01:three_prime_UTR
AACGAGTACAGAAGCTTATC+CGG 0.385106 7:+77818904 None:intergenic
GAGGATGTGGGTGATGTTGT+GGG 0.385369 7:+77819053 None:intergenic
CTCAACTGCAAATGAAGTTA+TGG 0.385930 7:-77814961 MsG0780040454.01.T01:three_prime_UTR
AGAGGATGTGGGTGATGTTG+TGG 0.387277 7:+77819052 None:intergenic
TCAGGTGAGAATCATTTCTC+AGG 0.388064 7:-77815832 MsG0780040454.01.T01:CDS
AGTTGTGTGTAAGGTTTGTT+TGG 0.389715 7:-77814524 MsG0780040454.01.T01:three_prime_UTR
TTGCAGTGCAGCGGTTATTA+CGG 0.394423 7:-77818068 MsG0780040454.01.T01:intron
TAGTATTCTAGTTGTGTGTA+AGG 0.400614 7:-77814533 MsG0780040454.01.T01:three_prime_UTR
GACGGTGGTGGTGGTGCTGG+TGG 0.411071 7:+77819077 None:intergenic
TAGGAAAGAAGGTTCTGTTT+TGG 0.414854 7:-77818767 MsG0780040454.01.T01:CDS
TACTGAGAGTGAAAATTTGT+TGG 0.415977 7:-77818827 MsG0780040454.01.T01:CDS
CATATACTCATGTCTCGATA+AGG 0.420537 7:-77815042 MsG0780040454.01.T01:three_prime_UTR
ATCCGGGGAGAGAGCGGACT+TGG 0.421265 7:+77818921 None:intergenic
TCTAAGCTTGGTGCAGATCC+TGG 0.425042 7:-77815793 MsG0780040454.01.T01:CDS
ATGACCTAACAAGAACATTC+AGG 0.429426 7:+77814714 None:intergenic
AGCTGAGAACGGAGAGGATG+TGG 0.435012 7:+77819040 None:intergenic
AGCGAAAATTTGTCACTAGA+AGG 0.437993 7:-77818031 MsG0780040454.01.T01:intron
CATGTCGTAGATCATATTCC+TGG 0.438405 7:-77815661 MsG0780040454.01.T01:CDS
AGGCTAAACAAATGCAGTTA+TGG 0.439147 7:-77814901 MsG0780040454.01.T01:three_prime_UTR
ATTGAGAGGAGTAGGAAAGA+AGG 0.439467 7:-77818778 MsG0780040454.01.T01:CDS
GCTGGTGGTTTGGAGAATTT+CGG 0.439769 7:+77819092 None:intergenic
TACAATGCAGCTGTGGAAGC+TGG 0.443294 7:-77815140 MsG0780040454.01.T01:CDS
GTAAGGTTTGTTTGGTGGCT+AGG 0.447993 7:-77814516 MsG0780040454.01.T01:three_prime_UTR
GCTCATTGTGATGCCCGTTT+GGG 0.448209 7:-77815183 MsG0780040454.01.T01:CDS
CAGTCTGCCATATAATAGAT+AGG 0.455534 7:+77814434 None:intergenic
ACCTCTGAAGAAGTTTCAAC+AGG 0.461123 7:+77815766 None:intergenic
TCAAAATCAACGTATATTCA+AGG 0.464588 7:+77814759 None:intergenic
CCCAATTGAAGTATCCCAAA+CGG 0.465316 7:+77815169 None:intergenic
GAAGTTTCAACAGGCATGCC+AGG 0.467127 7:+77815775 None:intergenic
CATACCTGCTCAAGATTTCG+AGG 0.473613 7:-77814921 MsG0780040454.01.T01:three_prime_UTR
TTCCTTCTCCGTCCCTGTCA+AGG 0.474413 7:-77818983 MsG0780040454.01.T01:CDS
ATATACTCATGTCTCGATAA+GGG 0.476211 7:-77815041 MsG0780040454.01.T01:three_prime_UTR
CCATATTTATTGAGCCTCTA+CGG 0.478853 7:-77815558 MsG0780040454.01.T01:CDS
GTCCAAGAACAATGGAGAAA+AGG 0.479438 7:+77815012 None:intergenic
AGGATGTGGGTGATGTTGTG+GGG 0.481858 7:+77819054 None:intergenic
CGCCAAGTCCGCTCTCTCCC+CGG 0.481905 7:-77818923 MsG0780040454.01.T01:CDS
TTGGGATACTTCAATTGGGC+AGG 0.489311 7:-77815165 MsG0780040454.01.T01:CDS
CCATCTCCTTCTTCTCCGAA+TGG 0.497479 7:-77819011 MsG0780040454.01.T01:CDS
AGAACGCCATTCGGAGAAGA+AGG 0.497667 7:+77819005 None:intergenic
GGAGAAGGAAGAACGCCATT+CGG 0.499383 7:+77818996 None:intergenic
AGGGTGAGACATCCTTTGGC+TGG 0.503541 7:-77815636 MsG0780040454.01.T01:CDS
ACGAGTACAGAAGCTTATCC+GGG 0.504528 7:+77818905 None:intergenic
GGAGATCTCCTTGACAGGGA+CGG 0.507079 7:+77818975 None:intergenic
TGTACTCGTTGGAATACGCC+GGG 0.513421 7:-77818891 MsG0780040454.01.T01:CDS
GGCTGGCACAAGCGGAAAAG+TGG 0.513620 7:-77815619 MsG0780040454.01.T01:CDS
GAGCGGACTTGGCGGCCGTA+GGG 0.515523 7:+77818932 None:intergenic
TGTGTGTAAGGTTTGTTTGG+TGG 0.516034 7:-77814521 MsG0780040454.01.T01:three_prime_UTR
GAGGTCGGAGACATGAACTT+TGG 0.517899 7:+77818954 None:intergenic
CCAATTGAAGTATCCCAAAC+GGG 0.519074 7:+77815170 None:intergenic
TGTTGAAACTTCTTCAGAGG+TGG 0.520731 7:-77815764 MsG0780040454.01.T01:CDS
CTCCTTGACAGGGACGGAGA+AGG 0.523200 7:+77818981 None:intergenic
CCGTTTGGGATACTTCAATT+GGG 0.524019 7:-77815169 MsG0780040454.01.T01:CDS
TAAAATCAACACAAACTTCG+AGG 0.525001 7:+77818800 None:intergenic
GTTGTATAATAATCAGATAG+AGG 0.525159 7:-77814475 MsG0780040454.01.T01:three_prime_UTR
ACTTTGGAGATCTCCTTGAC+AGG 0.526020 7:+77818970 None:intergenic
TTTCCGCTTGTGCCAGCCAA+AGG 0.528514 7:+77815624 None:intergenic
AGTTGAGGAAGGCGCGTTGG+AGG 0.531978 7:-77815220 MsG0780040454.01.T01:CDS
CATCCTTTGGCTGGCACAAG+CGG 0.533168 7:-77815627 MsG0780040454.01.T01:CDS
CTCAGTTGAGGAAGGCGCGT+TGG 0.536953 7:-77815223 MsG0780040454.01.T01:intron
CGGGGAGAGAGCGGACTTGG+CGG 0.539141 7:+77818924 None:intergenic
CTATCTATTATATGGCAGAC+TGG 0.542968 7:-77814433 MsG0780040454.01.T01:three_prime_UTR
CAGGTGAGAATCATTTCTCA+GGG 0.543545 7:-77815831 MsG0780040454.01.T01:CDS
AAGGATGTCTCACCCTCCCC+AGG 0.546506 7:+77815643 None:intergenic
AGGATAGACAGTTCTAAGCT+TGG 0.546865 7:-77815805 MsG0780040454.01.T01:CDS
ATGTCGTAGATCATATTCCT+GGG 0.548003 7:-77815660 MsG0780040454.01.T01:CDS
TAGTCAAGTGTGCTTTGTCA+TGG 0.548729 7:-77814407 MsG0780040454.01.T01:three_prime_UTR
TCATTTGCAGTTGAGCAGCT+AGG 0.551230 7:+77814969 None:intergenic
GTGGTGCAACAAGACTTACA+TGG 0.552624 7:+77815071 None:intergenic
CAAATGCAGTTATGGTTGAG+AGG 0.555563 7:-77814893 MsG0780040454.01.T01:three_prime_UTR
CTTGGCGGCCGTAGGGAGGT+CGG 0.555773 7:+77818939 None:intergenic
TTAGCCTCGAAATCTTGAGC+AGG 0.555819 7:+77814917 None:intergenic
CACTTCTTGCAGCGATATGT+AGG 0.556043 7:+77815709 None:intergenic
CCTCTACGGTGGATGAAAGA+TGG 0.560281 7:-77815544 MsG0780040454.01.T01:intron
GGATGTGGGTGATGTTGTGG+GGG 0.561150 7:+77819055 None:intergenic
GCCTGTTGAAACTTCTTCAG+AGG 0.563895 7:-77815767 MsG0780040454.01.T01:CDS
GTTGAAACTTCTTCAGAGGT+GGG 0.564173 7:-77815763 MsG0780040454.01.T01:CDS
GGATATCAAGTTGTCTCTGT+AGG 0.565292 7:-77814673 MsG0780040454.01.T01:three_prime_UTR
CTTTGGAGATCTCCTTGACA+GGG 0.570568 7:+77818971 None:intergenic
AACAAGCTTAAAATCTTCCC+CGG 0.571507 7:+77818873 None:intergenic
GGATAAGCTTCTGTACTCGT+TGG 0.571948 7:-77818902 MsG0780040454.01.T01:CDS
TTAACTATAAGCTAAATATG+TGG 0.572608 7:+77814634 None:intergenic
GTTGAGGAAGGCGCGTTGGA+GGG 0.574211 7:-77815219 MsG0780040454.01.T01:CDS
TTAGGATGGCTGTGCCGCTG+AGG 0.575177 7:-77818852 MsG0780040454.01.T01:CDS
TCTTGTCACTCAGTTGAGGA+AGG 0.575185 7:-77815231 MsG0780040454.01.T01:intron
GATGGAAGCGGAGCTGAGAA+CGG 0.575842 7:+77819029 None:intergenic
CGATGATGTTGCTGATGAAG+AGG 0.576599 7:+77819121 None:intergenic
CTGTACTCGTTGGAATACGC+CGG 0.577131 7:-77818892 MsG0780040454.01.T01:CDS
GGAGAAGAAGGAGATGGAAG+CGG 0.581126 7:+77819017 None:intergenic
GATAAGTGTCGATTTCAACT+TGG 0.581969 7:+77814818 None:intergenic
ACATGAGTATATGTATAAAG+TGG 0.584720 7:+77815052 None:intergenic
AAGCTTATCCGGGGAGAGAG+CGG 0.588410 7:+77818915 None:intergenic
AGAATCATTTCTCAGGGTCG+AGG 0.589151 7:-77815825 MsG0780040454.01.T01:CDS
CCATTCGGAGAAGAAGGAGA+TGG 0.592616 7:+77819011 None:intergenic
TGGTGCAACAAGACTTACAT+GGG 0.594553 7:+77815072 None:intergenic
CGGACTTGGCGGCCGTAGGG+AGG 0.598044 7:+77818935 None:intergenic
CTAGTAATTTATGTCATCTG+AGG 0.599090 7:-77815876 MsG0780040454.01.T01:CDS
CATTATTAGTCGTTAAATCG+TGG 0.600511 7:-77814694 MsG0780040454.01.T01:three_prime_UTR
CGTAGATCATATTCCTGGGG+AGG 0.603657 7:-77815656 MsG0780040454.01.T01:CDS
CAAGAACAATGGAGAAAAGG+TGG 0.604929 7:+77815015 None:intergenic
AGAGCGGACTTGGCGGCCGT+AGG 0.605058 7:+77818931 None:intergenic
GCTGAGAACGGAGAGGATGT+GGG 0.607618 7:+77819041 None:intergenic
TCATGTCTCCGACCTCCCTA+CGG 0.610980 7:-77818947 MsG0780040454.01.T01:CDS
ACGGGCATCACAATGAGCAC+AGG 0.619374 7:+77815188 None:intergenic
CCATCTTTCATCCACCGTAG+AGG 0.619573 7:+77815544 None:intergenic
GAATGCAAGTCCAAGAACAA+TGG 0.620741 7:+77815004 None:intergenic
GTAGATCATATTCCTGGGGA+GGG 0.623117 7:-77815655 MsG0780040454.01.T01:CDS
TAGGATGGCTGTGCCGCTGA+GGG 0.623217 7:-77818851 MsG0780040454.01.T01:CDS
TCACGGATGAGGTAAGGCAT+CGG 0.630162 7:+77819147 None:intergenic
GCAGGCATACAATGCAGCTG+TGG 0.649537 7:-77815147 MsG0780040454.01.T01:CDS
TCAAGTGTGCTTTGTCATGG+CGG 0.676320 7:-77814404 MsG0780040454.01.T01:three_prime_UTR
TATTTATTGAGCCTCTACGG+TGG 0.683041 7:-77815555 MsG0780040454.01.T01:CDS
CTTGCAATGCAACAATACGA+CGG 0.704891 7:+77815686 None:intergenic
CGAGTACAGAAGCTTATCCG+GGG 0.705162 7:+77818906 None:intergenic
TCACTCTCAGTATCCCTCAG+CGG 0.711395 7:+77818838 None:intergenic
TGTCGTAGATCATATTCCTG+GGG 0.712970 7:-77815659 MsG0780040454.01.T01:CDS
AAGCGGAGCTGAGAACGGAG+AGG 0.730719 7:+77819034 None:intergenic
GTACTCGTTGGAATACGCCG+GGG 0.747350 7:-77818890 MsG0780040454.01.T01:CDS
GGTGCAACAAGACTTACATG+GGG 0.765081 7:+77815073 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAAAATATTATAAAAGA+CGG + Chr7:77818124-77818143 None:intergenic 10.0%
!! AAAGAAAAAAAACTTATGAA+AGG + Chr7:77816786-77816805 None:intergenic 15.0%
!! AAGTTAACATAAAAAAACAT+AGG + Chr7:77816218-77816237 None:intergenic 15.0%
!! ATATTATCCTATCTATTATA+TGG - Chr7:77819082-77819101 MsG0780040454.01.T01:CDS 15.0%
!! TTATAAACAAAAAAGTTCTT+CGG + Chr7:77815694-77815713 None:intergenic 15.0%
!!! ACTTTCAAAAAACTTTTAAA+AGG + Chr7:77816308-77816327 None:intergenic 15.0%
!!! ACTTTTATTCATAAATACAA+AGG + Chr7:77817502-77817521 None:intergenic 15.0%
!!! GTACAATTAATCATTTTTTA+AGG + Chr7:77817070-77817089 None:intergenic 15.0%
!!! TTGTTTTTTTCTTCTTTTTT+CGG - Chr7:77815761-77815780 MsG0780040454.01.T01:CDS 15.0%
!!! TTTAAAAGTTTTTTGAAAGT+AGG - Chr7:77816308-77816327 MsG0780040454.01.T01:intron 15.0%
!! AAATAAGTTGTTTATCTGAA+AGG - Chr7:77815396-77815415 MsG0780040454.01.T01:intron 20.0%
!! ACAAATGACATAAAAGTAAA+AGG + Chr7:77816159-77816178 None:intergenic 20.0%
!! AGTGAAAAAAATAAGAAGAA+AGG + Chr7:77815587-77815606 None:intergenic 20.0%
!! GATTATTATACAACTCTATT+AGG + Chr7:77819042-77819061 None:intergenic 20.0%
!! TGATAATTATTTGAATCCTT+TGG - Chr7:77817442-77817461 MsG0780040454.01.T01:intron 20.0%
!! TTAACTATAAGCTAAATATG+TGG + Chr7:77818892-77818911 None:intergenic 20.0%
!!! ATTTTGATTCAAAAGCAATT+GGG - Chr7:77818780-77818799 MsG0780040454.01.T01:CDS 20.0%
!!! CAAAAAACTTTTAAAAGGAA+TGG + Chr7:77816303-77816322 None:intergenic 20.0%
!!! CATATTTAGCTTATAGTTAA+TGG - Chr7:77818892-77818911 MsG0780040454.01.T01:CDS 20.0%
!!! CATTTTTTAAGGTTTTCTTT+GGG + Chr7:77817059-77817078 None:intergenic 20.0%
!!! CGTTTTAAAATTAACTACAT+TGG + Chr7:77817143-77817162 None:intergenic 20.0%
!!! CTATTAATACATTTTAGTCA+AGG + Chr7:77817117-77817136 None:intergenic 20.0%
!!! GTTTTTTTTCTTTCTTTCAT+TGG - Chr7:77816793-77816812 MsG0780040454.01.T01:intron 20.0%
!!! TCATTTTTTAAGGTTTTCTT+TGG + Chr7:77817060-77817079 None:intergenic 20.0%
!!! TTTTAGTGTTAGTGAAAAAT+AGG - Chr7:77816581-77816600 MsG0780040454.01.T01:intron 20.0%
! AAAAAACACATTGTCTGAAA+AGG + Chr7:77816257-77816276 None:intergenic 25.0%
! AAAAAACATAGGAAGAGAAA+AGG + Chr7:77816207-77816226 None:intergenic 25.0%
! AAAACGAATTAACGTAGATT+TGG - Chr7:77817157-77817176 MsG0780040454.01.T01:intron 25.0%
! AAGTCAAATTCAATTCTTGT+TGG + Chr7:77818047-77818066 None:intergenic 25.0%
! AATGTTTATGTTTGACAATG+AGG - Chr7:77815902-77815921 MsG0780040454.01.T01:intron 25.0%
! ACATGAGTATATGTATAAAG+TGG + Chr7:77818474-77818493 None:intergenic 25.0%
! AGAAATAGCTAATTCATAAG+TGG - Chr7:77815342-77815361 MsG0780040454.01.T01:intron 25.0%
! ATAGGTTTAGTAAAACTGTT+TGG + Chr7:77815175-77815194 None:intergenic 25.0%
! CAAAAGATAAATTTGTGCTT+TGG - Chr7:77816625-77816644 MsG0780040454.01.T01:intron 25.0%
! CGCATAAATATGCATAAAAA+TGG - Chr7:77818246-77818265 MsG0780040454.01.T01:intron 25.0%
! GAAAAAAAACTTATGAAAGG+TGG + Chr7:77816783-77816802 None:intergenic 25.0%
! GAAACTAAGAAAATGCATTA+GGG - Chr7:77816837-77816856 MsG0780040454.01.T01:intron 25.0%
! GAAATAGCTAATTCATAAGT+GGG - Chr7:77815343-77815362 MsG0780040454.01.T01:intron 25.0%
! GTTGAGATACAAATAAATAG+TGG - Chr7:77817179-77817198 MsG0780040454.01.T01:intron 25.0%
! GTTGTATAATAATCAGATAG+AGG - Chr7:77819048-77819067 MsG0780040454.01.T01:CDS 25.0%
! TAGGTTTAGTAAAACTGTTT+GGG + Chr7:77815174-77815193 None:intergenic 25.0%
! TATATGATAATATGAGCATG+AGG + Chr7:77816083-77816102 None:intergenic 25.0%
! TCAAAATCAACGTATATTCA+AGG + Chr7:77818767-77818786 None:intergenic 25.0%
! TCATGCTCATATTATCATAT+AGG - Chr7:77816082-77816101 MsG0780040454.01.T01:intron 25.0%
!! ATACGAGTATCTTTTCAAAA+TGG - Chr7:77815667-77815686 MsG0780040454.01.T01:CDS 25.0%
!! ATACTTTGTTTAAAGTCTTC+AGG - Chr7:77815535-77815554 MsG0780040454.01.T01:intron 25.0%
!! ATTTTGCAGCTTATATCATA+AGG + Chr7:77815380-77815399 None:intergenic 25.0%
!! CTTCTTCCAAAATGATTTTT+AGG - Chr7:77818678-77818697 MsG0780040454.01.T01:intron 25.0%
!! GCATATTACCAAAATTTTCT+TGG - Chr7:77818151-77818170 MsG0780040454.01.T01:intron 25.0%
!! TAATTTGTAGCAATAGATTC+CGG - Chr7:77817472-77817491 MsG0780040454.01.T01:intron 25.0%
!! TACGAGTATCTTTTCAAAAT+GGG - Chr7:77815668-77815687 MsG0780040454.01.T01:CDS 25.0%
!! TACTTTGTTTAAAGTCTTCA+GGG - Chr7:77815536-77815555 MsG0780040454.01.T01:intron 25.0%
!! TTAATGCTCCAAGAAAATTT+TGG + Chr7:77818162-77818181 None:intergenic 25.0%
!! TTTAAGTTATGATAGTGCTT+AGG - Chr7:77815634-77815653 MsG0780040454.01.T01:CDS 25.0%
!! TTTTCTTAGTTTCCCAATAT+CGG + Chr7:77816830-77816849 None:intergenic 25.0%
!!! AATGTCCACTTTAGAATATT+CGG + Chr7:77817265-77817284 None:intergenic 25.0%
!!! ATTACTAGTTTTCTTCATGT+TGG + Chr7:77818937-77818956 None:intergenic 25.0%
!!! ATTTTCGCTTTTCATCAAAT+AGG + Chr7:77815481-77815500 None:intergenic 25.0%
!!! GATTCATTAGACTTGTTAAA+AGG + Chr7:77817934-77817953 None:intergenic 25.0%
!!! GATTTTGATTCAAAAGCAAT+TGG - Chr7:77818779-77818798 MsG0780040454.01.T01:CDS 25.0%
!!! TAATCAATAAGCTGTTTTCA+AGG + Chr7:77815285-77815304 None:intergenic 25.0%
!!! TCAAGGAAGATTATTTTATC+TGG + Chr7:77817100-77817119 None:intergenic 25.0%
!!! TTACTAGTTTTCTTCATGTT+GGG + Chr7:77818936-77818955 None:intergenic 25.0%
!!! TTTGTGTTGATTTTATTGAG+AGG - Chr7:77814731-77814750 MsG0780040454.01.T01:three_prime_UTR 25.0%
!!! TTTTTGGGGAGTATTTTTTA+AGG + Chr7:77816964-77816983 None:intergenic 25.0%
AAAAGCCCTTATCACTATAA+GGG - Chr7:77814984-77815003 MsG0780040454.01.T01:three_prime_UTR 30.0%
AATGATTCTCACCTGAAAAA+AGG + Chr7:77817687-77817706 None:intergenic 30.0%
AATGTGATGATTGTGTACTA+TGG - Chr7:77817605-77817624 MsG0780040454.01.T01:intron 30.0%
AGTGTTAGTGAAAAATAGGT+GGG - Chr7:77816585-77816604 MsG0780040454.01.T01:intron 30.0%
AGTTTGATATACAACAACCA+TGG + Chr7:77817530-77817549 None:intergenic 30.0%
ATAAGCATGCTTATGACATA+TGG - Chr7:77814926-77814945 MsG0780040454.01.T01:three_prime_UTR 30.0%
ATAAGCCCTTATAGTGATAA+GGG + Chr7:77814992-77815011 None:intergenic 30.0%
ATAAGCTGTATATCCAAACA+AGG + Chr7:77814952-77814971 None:intergenic 30.0%
ATAGTACACAATCATCACAT+TGG + Chr7:77817606-77817625 None:intergenic 30.0%
ATATACTCATGTCTCGATAA+GGG - Chr7:77818482-77818501 MsG0780040454.01.T01:intron 30.0%
ATGAATAAAAGTCCTTACCA+TGG - Chr7:77817510-77817529 MsG0780040454.01.T01:intron 30.0%
ATGTGATGATTGTGTACTAT+GGG - Chr7:77817606-77817625 MsG0780040454.01.T01:intron 30.0%
CATTATTAGTCGTTAAATCG+TGG - Chr7:77818829-77818848 MsG0780040454.01.T01:CDS 30.0%
CCTATAGTTGAAAATGTTTG+AGG - Chr7:77815955-77815974 MsG0780040454.01.T01:intron 30.0%
CTAGTAATTTATGTCATCTG+AGG - Chr7:77817647-77817666 MsG0780040454.01.T01:intron 30.0%
CTGAAAACAGCTTATGAATA+TGG + Chr7:77815236-77815255 None:intergenic 30.0%
GACAACATTAGTACAGATTT+GGG + Chr7:77816365-77816384 None:intergenic 30.0%
GGAAACTAAGAAAATGCATT+AGG - Chr7:77816836-77816855 MsG0780040454.01.T01:intron 30.0%
GTACTAATGTTGTCAAATAG+TGG - Chr7:77816371-77816390 MsG0780040454.01.T01:intron 30.0%
TAAAATCAACACAAACTTCG+AGG + Chr7:77814726-77814745 None:intergenic 30.0%
TACAAATTAGACACTACCAA+AGG + Chr7:77817461-77817480 None:intergenic 30.0%
TACTGAGAGTGAAAATTTGT+TGG - Chr7:77814696-77814715 MsG0780040454.01.T01:three_prime_UTR 30.0%
TAGTGTTAGTGAAAAATAGG+TGG - Chr7:77816584-77816603 MsG0780040454.01.T01:intron 30.0%
TCGTCTAAAAATACTAGGTA+TGG - Chr7:77816024-77816043 MsG0780040454.01.T01:intron 30.0%
TGACAACATTAGTACAGATT+TGG + Chr7:77816366-77816385 None:intergenic 30.0%
TGCTCATATTATCATATAGG+TGG - Chr7:77816085-77816104 MsG0780040454.01.T01:intron 30.0%
TTGAAAATGTTTGAGGAGAT+GGG - Chr7:77815962-77815981 MsG0780040454.01.T01:intron 30.0%
TTTATGCATATTTATGCGCA+CGG + Chr7:77818244-77818263 None:intergenic 30.0%
! AGTGACAACTTGTATTGTTT+TGG - Chr7:77816113-77816132 MsG0780040454.01.T01:intron 30.0%
! CCTCAAACATTTTCAACTAT+AGG + Chr7:77815958-77815977 None:intergenic 30.0%
! CTTATGAATATGGACTTGTT+TGG + Chr7:77815226-77815245 None:intergenic 30.0%
! CTTTTCAACTACACAAAAGT+CGG - Chr7:77818416-77818435 MsG0780040454.01.T01:intron 30.0%
! GAATGTTTTCTATGTTTGAG+TGG - Chr7:77818183-77818202 MsG0780040454.01.T01:intron 30.0%
! GGAGATCCTAAAAATCATTT+TGG + Chr7:77818687-77818706 None:intergenic 30.0%
! TAGTATTCTAGTTGTGTGTA+AGG - Chr7:77818990-77819009 MsG0780040454.01.T01:CDS 30.0%
! TTGATTTTATTGAGAGGAGT+AGG - Chr7:77814737-77814756 MsG0780040454.01.T01:three_prime_UTR 30.0%
! TTTTCAACTACACAAAAGTC+GGG - Chr7:77818417-77818436 MsG0780040454.01.T01:intron 30.0%
!! ACTAAATAATGAGAGCATCT+TGG + Chr7:77818086-77818105 None:intergenic 30.0%
!! TGGGAGTATCAAATTAAATC+AGG - Chr7:77817298-77817317 MsG0780040454.01.T01:intron 30.0%
!! TGTTTAAGAGCTAGCTTTAA+CGG - Chr7:77816456-77816475 MsG0780040454.01.T01:intron 30.0%
!!! AGATTTTAAGCTTGTTAGGA+TGG - Chr7:77814657-77814676 MsG0780040454.01.T01:three_prime_UTR 30.0%
!!! AGTTTTGAGGATTGAAGAAT+GGG - Chr7:77816727-77816746 MsG0780040454.01.T01:intron 30.0%
!!! GAAATATCTCTCCTTTTTTC+AGG - Chr7:77817673-77817692 MsG0780040454.01.T01:intron 30.0%
AACAAGCTTAAAATCTTCCC+CGG + Chr7:77814653-77814672 None:intergenic 35.0%
AATGATCGTCAAATTGCCTT+TGG - Chr7:77819146-77819165 MsG0780040454.01.T01:CDS 35.0%
AATGCATTAGGGAATAGCTT+TGG - Chr7:77816848-77816867 MsG0780040454.01.T01:intron 35.0%
AGAACCTGAATGTTCTTGTT+AGG - Chr7:77818805-77818824 MsG0780040454.01.T01:CDS 35.0%
AGCGAAAATTTGTCACTAGA+AGG - Chr7:77815492-77815511 MsG0780040454.01.T01:intron 35.0%
AGGATTGAAGAATGGGAAAA+GGG - Chr7:77816734-77816753 MsG0780040454.01.T01:intron 35.0%
AGGCTAAACAAATGCAGTTA+TGG - Chr7:77818622-77818641 MsG0780040454.01.T01:intron 35.0%
ATGACCTAACAAGAACATTC+AGG + Chr7:77818812-77818831 None:intergenic 35.0%
ATGTCGTAGATCATATTCCT+GGG - Chr7:77817863-77817882 MsG0780040454.01.T01:intron 35.0%
CAGTCTGCCATATAATAGAT+AGG + Chr7:77819092-77819111 None:intergenic 35.0%
CATAAGCCCTTATAGTGATA+AGG + Chr7:77814993-77815012 None:intergenic 35.0%
CATATACTCATGTCTCGATA+AGG - Chr7:77818481-77818500 MsG0780040454.01.T01:intron 35.0%
CCAAAGAACCTTGTATATAG+AGG + Chr7:77818212-77818231 None:intergenic 35.0%
CCATATTTATTGAGCCTCTA+CGG - Chr7:77817965-77817984 MsG0780040454.01.T01:intron 35.0%
CCTCTATATACAAGGTTCTT+TGG - Chr7:77818209-77818228 MsG0780040454.01.T01:intron 35.0%
CGCTTTCGTCTAAAAATACT+AGG - Chr7:77816019-77816038 MsG0780040454.01.T01:intron 35.0%
CTATCTATTATATGGCAGAC+TGG - Chr7:77819090-77819109 MsG0780040454.01.T01:CDS 35.0%
CTCAACTGCAAATGAAGTTA+TGG - Chr7:77818562-77818581 MsG0780040454.01.T01:intron 35.0%
CTGAGCTTATCTACTAACAT+AGG + Chr7:77815193-77815212 None:intergenic 35.0%
GAAAAGCCCTTATCACTATA+AGG - Chr7:77814983-77815002 MsG0780040454.01.T01:three_prime_UTR 35.0%
GACATTTAGTATGAGATGCT+GGG - Chr7:77817279-77817298 MsG0780040454.01.T01:intron 35.0%
GATATACAACAACCATGGTA+AGG + Chr7:77817525-77817544 None:intergenic 35.0%
GTAGGAATCATGTTAGATGT+TGG - Chr7:77816326-77816345 MsG0780040454.01.T01:intron 35.0%
GTGTTAGTGAAAAATAGGTG+GGG - Chr7:77816586-77816605 MsG0780040454.01.T01:intron 35.0%
GTTGAAAATGTTTGAGGAGA+TGG - Chr7:77815961-77815980 MsG0780040454.01.T01:intron 35.0%
TATTTCTTGTCACTCAGTTG+AGG - Chr7:77818288-77818307 MsG0780040454.01.T01:intron 35.0%
TGTGCTAAATTAGCGTATTG+AGG + Chr7:77816432-77816451 None:intergenic 35.0%
TTATTTCCATAAGCTCTCCA+GGG - Chr7:77815257-77815276 MsG0780040454.01.T01:intron 35.0%
! AGTGGATTCCTCTATATACA+AGG - Chr7:77818201-77818220 MsG0780040454.01.T01:intron 35.0%
! AGTTGTGTGTAAGGTTTGTT+TGG - Chr7:77818999-77819018 MsG0780040454.01.T01:CDS 35.0%
! CTTTTGTGTAGTTGAAAAGC+TGG + Chr7:77818415-77818434 None:intergenic 35.0%
! TAGGAAAGAAGGTTCTGTTT+TGG - Chr7:77814756-77814775 MsG0780040454.01.T01:three_prime_UTR 35.0%
! TCATAAATACAAAGGCATGC+CGG + Chr7:77817494-77817513 None:intergenic 35.0%
!! GATAAGTGTCGATTTCAACT+TGG + Chr7:77818708-77818727 None:intergenic 35.0%
!! GCTGTTTTCGTAAGCTATAT+TGG - Chr7:77815085-77815104 MsG0780040454.01.T01:exon 35.0%
!! GGGAAGATTTTAAGCTTGTT+AGG - Chr7:77814653-77814672 MsG0780040454.01.T01:three_prime_UTR 35.0%
!! TAAGGTTTTCTTTGGGAGTT+AGG + Chr7:77817052-77817071 None:intergenic 35.0%
!! TTATGACATATGGCCTTGTT+TGG - Chr7:77814936-77814955 MsG0780040454.01.T01:three_prime_UTR 35.0%
!!! GACAACTTGTATTGTTTTGG+TGG - Chr7:77816116-77816135 MsG0780040454.01.T01:intron 35.0%
!!! GAGTTTTGAGGATTGAAGAA+TGG - Chr7:77816726-77816745 MsG0780040454.01.T01:intron 35.0%
AACGAGTACAGAAGCTTATC+CGG + Chr7:77814622-77814641 None:intergenic 40.0%
AGAGCAGGTGTGTATTATGA+AGG - Chr7:77815862-77815881 MsG0780040454.01.T01:CDS 40.0%
ATACCAGAACAGCTACTAGT+AGG + Chr7:77817568-77817587 None:intergenic 40.0%
ATTGAGAGGAGTAGGAAAGA+AGG - Chr7:77814745-77814764 MsG0780040454.01.T01:three_prime_UTR 40.0%
CAAATGCAGTTATGGTTGAG+AGG - Chr7:77818630-77818649 MsG0780040454.01.T01:intron 40.0%
CAAGAACAATGGAGAAAAGG+TGG + Chr7:77818511-77818530 None:intergenic 40.0%
CAGGTGAGAATCATTTCTCA+GGG - Chr7:77817692-77817711 MsG0780040454.01.T01:intron 40.0%
CATGTCGTAGATCATATTCC+TGG - Chr7:77817862-77817881 MsG0780040454.01.T01:intron 40.0%
CCGTAGAGGCTCAATAAATA+TGG + Chr7:77817968-77817987 None:intergenic 40.0%
CTTAGTTTCCCAATATCGGA+GGG + Chr7:77816826-77816845 None:intergenic 40.0%
CTTATTTCCATAAGCTCTCC+AGG - Chr7:77815256-77815275 MsG0780040454.01.T01:intron 40.0%
CTTGCAATGCAACAATACGA+CGG + Chr7:77817840-77817859 None:intergenic 40.0%
GAATGCAAGTCCAAGAACAA+TGG + Chr7:77818522-77818541 None:intergenic 40.0%
GACTAAAACCCTCCGATATT+GGG - Chr7:77816815-77816834 MsG0780040454.01.T01:intron 40.0%
GAGGATTGAAGAATGGGAAA+AGG - Chr7:77816733-77816752 MsG0780040454.01.T01:intron 40.0%
GGACATTTAGTATGAGATGC+TGG - Chr7:77817278-77817297 MsG0780040454.01.T01:intron 40.0%
GTCCAAGAACAATGGAGAAA+AGG + Chr7:77818514-77818533 None:intergenic 40.0%
GTTGAAACTTCTTCAGAGGT+GGG - Chr7:77817760-77817779 MsG0780040454.01.T01:intron 40.0%
TAGTCAAGTGTGCTTTGTCA+TGG - Chr7:77819116-77819135 MsG0780040454.01.T01:CDS 40.0%
TATTTATTGAGCCTCTACGG+TGG - Chr7:77817968-77817987 MsG0780040454.01.T01:intron 40.0%
TCAAATAGTGGCTAGCATAG+CGG - Chr7:77816383-77816402 MsG0780040454.01.T01:intron 40.0%
TCAGGTGAGAATCATTTCTC+AGG - Chr7:77817691-77817710 MsG0780040454.01.T01:intron 40.0%
TCTTAGTTTCCCAATATCGG+AGG + Chr7:77816827-77816846 None:intergenic 40.0%
TGGGAGGAATGAAAAGTTAG+CGG + Chr7:77816998-77817017 None:intergenic 40.0%
TGGTGCAACAAGACTTACAT+GGG + Chr7:77818454-77818473 None:intergenic 40.0%
TGTCGTAGATCATATTCCTG+GGG - Chr7:77817864-77817883 MsG0780040454.01.T01:intron 40.0%
TGTTGAAACTTCTTCAGAGG+TGG - Chr7:77817759-77817778 MsG0780040454.01.T01:intron 40.0%
TTGAAGAATGGGAAAAGGGA+AGG - Chr7:77816738-77816757 MsG0780040454.01.T01:intron 40.0%
TTTGTTTAATGCCCTCCTTG+TGG - Chr7:77817378-77817397 MsG0780040454.01.T01:intron 40.0%
! ACCTCTGAAGAAGTTTCAAC+AGG + Chr7:77817760-77817779 None:intergenic 40.0%
! CACCTTTTCTCCATTGTTCT+TGG - Chr7:77818509-77818528 MsG0780040454.01.T01:intron 40.0%
! CCAATTGAAGTATCCCAAAC+GGG + Chr7:77818356-77818375 None:intergenic 40.0%
! CCCAATTGAAGTATCCCAAA+CGG + Chr7:77818357-77818376 None:intergenic 40.0%
! CCGTTTGGGATACTTCAATT+GGG - Chr7:77818354-77818373 MsG0780040454.01.T01:intron 40.0%
! GAATTTGTTTGCCCCAATGA+TGG - Chr7:77815833-77815852 MsG0780040454.01.T01:CDS 40.0%
! GACAGCCGAATATTCTAAAG+TGG - Chr7:77817257-77817276 MsG0780040454.01.T01:intron 40.0%
! GGATATCAAGTTGTCTCTGT+AGG - Chr7:77818850-77818869 MsG0780040454.01.T01:CDS 40.0%
! TGCTGATGAAGAGGTTTTCA+CGG + Chr7:77814396-77814415 None:intergenic 40.0%
! TGTGTGTAAGGTTTGTTTGG+TGG - Chr7:77819002-77819021 MsG0780040454.01.T01:CDS 40.0%
!! AGGAGGGCATTAAACAAAAC+TGG + Chr7:77817376-77817395 None:intergenic 40.0%
!! AGGATAGACAGTTCTAAGCT+TGG - Chr7:77817718-77817737 MsG0780040454.01.T01:intron 40.0%
!! GAAAACACTGATTTGTACGC+AGG - Chr7:77816556-77816575 MsG0780040454.01.T01:intron 40.0%
!! GAAAGGAGTGTTAGTCTTAC+AGG - Chr7:77815413-77815432 MsG0780040454.01.T01:intron 40.0%
!! GGAGGGCATTAAACAAAACT+GGG + Chr7:77817375-77817394 None:intergenic 40.0%
!! GTTTTCTTTGGGAGTTAGGA+GGG + Chr7:77817048-77817067 None:intergenic 40.0%
!! TGCTCTAGAAAGCCATCATT+GGG + Chr7:77815848-77815867 None:intergenic 40.0%
!! TGTTTTTGTTTGCAGTGCAG+CGG - Chr7:77815446-77815465 MsG0780040454.01.T01:intron 40.0%
!!! AGCGGAATCTCTCACTTTTT+TGG + Chr7:77816980-77816999 None:intergenic 40.0%
!!! CGGAATCTCTCACTTTTTTG+GGG + Chr7:77816978-77816997 None:intergenic 40.0%
!!! GCGGAATCTCTCACTTTTTT+GGG + Chr7:77816979-77816998 None:intergenic 40.0%
!!! GTTTTGGTTCATTGTTTCGC+TGG - Chr7:77814772-77814791 MsG0780040454.01.T01:three_prime_UTR 40.0%
AATGGGAAAAGGGAAGGAGA+AGG - Chr7:77816744-77816763 MsG0780040454.01.T01:intron 45.0%
ACGAGTACAGAAGCTTATCC+GGG + Chr7:77814621-77814640 None:intergenic 45.0%
AGAATCATTTCTCAGGGTCG+AGG - Chr7:77817698-77817717 MsG0780040454.01.T01:intron 45.0%
AGCTCTGCTTTAACGATGCA+AGG + Chr7:77815811-77815830 None:intergenic 45.0%
ATGGGAAAAGGGAAGGAGAA+GGG - Chr7:77816745-77816764 MsG0780040454.01.T01:intron 45.0%
CACGACTTCCTTCATGTTGT+GGG - Chr7:77816056-77816075 MsG0780040454.01.T01:intron 45.0%
CACTTCTTGCAGCGATATGT+AGG + Chr7:77817817-77817836 None:intergenic 45.0%
CATACCTGCTCAAGATTTCG+AGG - Chr7:77818602-77818621 MsG0780040454.01.T01:intron 45.0%
CGATGATGTTGCTGATGAAG+AGG + Chr7:77814405-77814424 None:intergenic 45.0%
GCATAGCTAGGGCTATGTTT+GGG - Chr7:77816680-77816699 MsG0780040454.01.T01:intron 45.0%
GCCTGTTGAAACTTCTTCAG+AGG - Chr7:77817756-77817775 MsG0780040454.01.T01:intron 45.0%
GCTATGTTTGGGAGTTTGGT+GGG - Chr7:77816691-77816710 MsG0780040454.01.T01:intron 45.0%
GCTCTGCTTTAACGATGCAA+GGG + Chr7:77815810-77815829 None:intergenic 45.0%
GGACTAAAACCCTCCGATAT+TGG - Chr7:77816814-77816833 MsG0780040454.01.T01:intron 45.0%
GGATAAGCTTCTGTACTCGT+TGG - Chr7:77814621-77814640 MsG0780040454.01.T01:three_prime_UTR 45.0%
GGTGCAACAAGACTTACATG+GGG + Chr7:77818453-77818472 None:intergenic 45.0%
GTAGATCATATTCCTGGGGA+GGG - Chr7:77817868-77817887 MsG0780040454.01.T01:intron 45.0%
GTGGTGCAACAAGACTTACA+TGG + Chr7:77818455-77818474 None:intergenic 45.0%
GTTCCTACTAGTAGCTGTTC+TGG - Chr7:77817562-77817581 MsG0780040454.01.T01:intron 45.0%
TAGGGCTATGTTTGGGAGTT+TGG - Chr7:77816687-77816706 MsG0780040454.01.T01:intron 45.0%
TCAAGTGTGCTTTGTCATGG+CGG - Chr7:77819119-77819138 MsG0780040454.01.T01:CDS 45.0%
TCACGAATCGCGAAGAATAG+TGG + Chr7:77816534-77816553 None:intergenic 45.0%
TCACGACTTCCTTCATGTTG+TGG - Chr7:77816055-77816074 MsG0780040454.01.T01:intron 45.0%
TCATTTGCAGTTGAGCAGCT+AGG + Chr7:77818557-77818576 None:intergenic 45.0%
TCCTCTGTCTTGCATAGCTA+GGG - Chr7:77816669-77816688 MsG0780040454.01.T01:intron 45.0%
TCTTGTCACTCAGTTGAGGA+AGG - Chr7:77818292-77818311 MsG0780040454.01.T01:intron 45.0%
TGCATAGCTAGGGCTATGTT+TGG - Chr7:77816679-77816698 MsG0780040454.01.T01:intron 45.0%
TTAGCCTCGAAATCTTGAGC+AGG + Chr7:77818609-77818628 None:intergenic 45.0%
TTCCTCTGTCTTGCATAGCT+AGG - Chr7:77816668-77816687 MsG0780040454.01.T01:intron 45.0%
TTGCAGTGCAGCGGTTATTA+CGG - Chr7:77815455-77815474 MsG0780040454.01.T01:intron 45.0%
! ACTTTGGAGATCTCCTTGAC+AGG + Chr7:77814556-77814575 None:intergenic 45.0%
! AGGTTTTCACGGATGAGGTA+AGG + Chr7:77814385-77814404 None:intergenic 45.0%
! CCCGTTTGGGATACTTCAAT+TGG - Chr7:77818353-77818372 MsG0780040454.01.T01:intron 45.0%
! CTTTGGAGATCTCCTTGACA+GGG + Chr7:77814555-77814574 None:intergenic 45.0%
! GCTGGTGGTTTGGAGAATTT+CGG + Chr7:77814434-77814453 None:intergenic 45.0%
! GTAAGGTTTGTTTGGTGGCT+AGG - Chr7:77819007-77819026 MsG0780040454.01.T01:CDS 45.0%
! GTTTGAGGAGATGGGTTTCA+AGG - Chr7:77815970-77815989 MsG0780040454.01.T01:intron 45.0%
! TGAAGAGGTTTTCACGGATG+AGG + Chr7:77814390-77814409 None:intergenic 45.0%
! TTTGGGAGTTTGGTGGGAAA+TGG - Chr7:77816697-77816716 MsG0780040454.01.T01:intron 45.0%
!! AAGCTGTTTTCAAGGTACCC+TGG + Chr7:77815277-77815296 None:intergenic 45.0%
!! AGACGAAAGCGCTTGTATAC+AGG + Chr7:77816010-77816029 None:intergenic 45.0%
!! AGCTAGCTTTAACGGCACTA+CGG - Chr7:77816464-77816483 MsG0780040454.01.T01:intron 45.0%
!! CAATGATGGCTTTCTAGAGC+AGG - Chr7:77815847-77815866 MsG0780040454.01.T01:CDS 45.0%
!! CTGCTCTAGAAAGCCATCAT+TGG + Chr7:77815849-77815868 None:intergenic 45.0%
!! GACGAAAGCGCTTGTATACA+GGG + Chr7:77816009-77816028 None:intergenic 45.0%
!! GCATTAGGGAATAGCTTTGG+AGG - Chr7:77816851-77816870 MsG0780040454.01.T01:intron 45.0%
!! GCTCTAGAAAGCCATCATTG+GGG + Chr7:77815847-77815866 None:intergenic 45.0%
!! GGTTTTCTTTGGGAGTTAGG+AGG + Chr7:77817049-77817068 None:intergenic 45.0%
!! GTTTCGCTGGTGTTTCTAGA+AGG - Chr7:77814785-77814804 MsG0780040454.01.T01:three_prime_UTR 45.0%
AGAACGCCATTCGGAGAAGA+AGG + Chr7:77814521-77814540 None:intergenic 50.0%
AGAGGATGTGGGTGATGTTG+TGG + Chr7:77814474-77814493 None:intergenic 50.0%
AGGATGTGGGTGATGTTGTG+GGG + Chr7:77814472-77814491 None:intergenic 50.0%
CATGAGGTCCCACAACATGA+AGG + Chr7:77816067-77816086 None:intergenic 50.0%
CCATCTCCTTCTTCTCCGAA+TGG - Chr7:77814512-77814531 MsG0780040454.01.T01:three_prime_UTR 50.0%
CCATCTTTCATCCACCGTAG+AGG + Chr7:77817982-77818001 None:intergenic 50.0%
CCATTCGGAGAAGAAGGAGA+TGG + Chr7:77814515-77814534 None:intergenic 50.0%
CCTCTACGGTGGATGAAAGA+TGG - Chr7:77817979-77817998 MsG0780040454.01.T01:intron 50.0%
CGAGTACAGAAGCTTATCCG+GGG + Chr7:77814620-77814639 None:intergenic 50.0%
CGTAGATCATATTCCTGGGG+AGG - Chr7:77817867-77817886 MsG0780040454.01.T01:intron 50.0%
CTGTACTCGTTGGAATACGC+CGG - Chr7:77814631-77814650 MsG0780040454.01.T01:three_prime_UTR 50.0%
GAAGTTTCAACAGGCATGCC+AGG + Chr7:77817751-77817770 None:intergenic 50.0%
GAGGATGTGGGTGATGTTGT+GGG + Chr7:77814473-77814492 None:intergenic 50.0%
GAGGTCGGAGACATGAACTT+TGG + Chr7:77814572-77814591 None:intergenic 50.0%
GAGTTAGGAGGGAAACGAAG+GGG + Chr7:77817037-77817056 None:intergenic 50.0%
GCATGCTTATGTCACTGCGT+AGG + Chr7:77814916-77814935 None:intergenic 50.0%
GCTCATTGTGATGCCCGTTT+GGG - Chr7:77818340-77818359 MsG0780040454.01.T01:intron 50.0%
GGAGAAGAAGGAGATGGAAG+CGG + Chr7:77814509-77814528 None:intergenic 50.0%
GGAGAAGGAAGAACGCCATT+CGG + Chr7:77814530-77814549 None:intergenic 50.0%
GGAGTTAGGAGGGAAACGAA+GGG + Chr7:77817038-77817057 None:intergenic 50.0%
GGCTATGTTTGGGAGTTTGG+TGG - Chr7:77816690-77816709 MsG0780040454.01.T01:intron 50.0%
GTTTAATGCCCTCCTTGTGG+TGG - Chr7:77817381-77817400 MsG0780040454.01.T01:intron 50.0%
TACAATGCAGCTGTGGAAGC+TGG - Chr7:77818383-77818402 MsG0780040454.01.T01:intron 50.0%
TCACTCTCAGTATCCCTCAG+CGG + Chr7:77814688-77814707 None:intergenic 50.0%
TGCTCATTGTGATGCCCGTT+TGG - Chr7:77818339-77818358 MsG0780040454.01.T01:intron 50.0%
TGGGAGAAGGCTGAGGTTAT+TGG - Chr7:77817412-77817431 MsG0780040454.01.T01:intron 50.0%
TGTACTCGTTGGAATACGCC+GGG - Chr7:77814632-77814651 MsG0780040454.01.T01:three_prime_UTR 50.0%
! AAATGGAGGGGGGAGTTTTG+AGG - Chr7:77816714-77816733 MsG0780040454.01.T01:intron 50.0%
! AAGGTACCCTGGAGAGCTTA+TGG + Chr7:77815266-77815285 None:intergenic 50.0%
! AGTTTGGTGGGAAATGGAGG+GGG - Chr7:77816703-77816722 MsG0780040454.01.T01:intron 50.0%
! GAGTTTGGTGGGAAATGGAG+GGG - Chr7:77816702-77816721 MsG0780040454.01.T01:intron 50.0%
! GGAGTTTGGTGGGAAATGGA+GGG - Chr7:77816701-77816720 MsG0780040454.01.T01:intron 50.0%
!! TAACGATGCAAGGGCATCTG+CGG + Chr7:77815801-77815820 None:intergenic 50.0%
!! TCTAAGCTTGGTGCAGATCC+TGG - Chr7:77817730-77817749 MsG0780040454.01.T01:intron 50.0%
AAGCTTATCCGGGGAGAGAG+CGG + Chr7:77814611-77814630 None:intergenic 55.0%
ACGGGCATCACAATGAGCAC+AGG + Chr7:77818338-77818357 None:intergenic 55.0%
AGCTGAGAACGGAGAGGATG+TGG + Chr7:77814486-77814505 None:intergenic 55.0%
AGGGTGAGACATCCTTTGGC+TGG - Chr7:77817887-77817906 MsG0780040454.01.T01:intron 55.0%
ATCCCTCAACCACCACAAGG+AGG + Chr7:77817393-77817412 None:intergenic 55.0%
CATCCTTTGGCTGGCACAAG+CGG - Chr7:77817896-77817915 MsG0780040454.01.T01:intron 55.0%
CCTTGTGGTGGTTGAGGGAT+GGG - Chr7:77817393-77817412 MsG0780040454.01.T01:intron 55.0%
GATGGAAGCGGAGCTGAGAA+CGG + Chr7:77814497-77814516 None:intergenic 55.0%
GCCCTAGCTATGCAAGACAG+AGG + Chr7:77816673-77816692 None:intergenic 55.0%
GCTGAGAACGGAGAGGATGT+GGG + Chr7:77814485-77814504 None:intergenic 55.0%
GGAAACGAAGGGGAAGGCTT+TGG + Chr7:77817027-77817046 None:intergenic 55.0%
GGAGATCTCCTTGACAGGGA+CGG + Chr7:77814551-77814570 None:intergenic 55.0%
GGATGTGGGTGATGTTGTGG+GGG + Chr7:77814471-77814490 None:intergenic 55.0%
GGGAGTTAGGAGGGAAACGA+AGG + Chr7:77817039-77817058 None:intergenic 55.0%
GTACTCGTTGGAATACGCCG+GGG - Chr7:77814633-77814652 MsG0780040454.01.T01:three_prime_UTR 55.0%
GTCTTCAGGGACTTCGCGTT+TGG - Chr7:77815549-77815568 MsG0780040454.01.T01:CDS 55.0%
TAGGAGGGAAACGAAGGGGA+AGG + Chr7:77817033-77817052 None:intergenic 55.0%
TCATGTCTCCGACCTCCCTA+CGG - Chr7:77814576-77814595 MsG0780040454.01.T01:three_prime_UTR 55.0%
TCCCTCAACCACCACAAGGA+GGG + Chr7:77817392-77817411 None:intergenic 55.0%
TCCTTGTGGTGGTTGAGGGA+TGG - Chr7:77817392-77817411 MsG0780040454.01.T01:intron 55.0%
TTCCTTCTCCGTCCCTGTCA+AGG - Chr7:77814540-77814559 MsG0780040454.01.T01:three_prime_UTR 55.0%
TTTCCGCTTGTGCCAGCCAA+AGG + Chr7:77817902-77817921 None:intergenic 55.0%
! AACGAAGGGGAAGGCTTTGG+AGG + Chr7:77817024-77817043 None:intergenic 55.0%
! GGGAGTTTGGTGGGAAATGG+AGG - Chr7:77816700-77816719 MsG0780040454.01.T01:intron 55.0%
! GTTTGGTGGGAAATGGAGGG+GGG - Chr7:77816704-77816723 MsG0780040454.01.T01:intron 55.0%
!! AAGGCTTTGGAGGGAATGGG+AGG + Chr7:77817014-77817033 None:intergenic 55.0%
!! ACGAAGGGGAAGGCTTTGGA+GGG + Chr7:77817023-77817042 None:intergenic 55.0%
!! GGGAAGGCTTTGGAGGGAAT+GGG + Chr7:77817017-77817036 None:intergenic 55.0%
AAGCGGAGCTGAGAACGGAG+AGG + Chr7:77814492-77814511 None:intergenic 60.0%
AAGGATGTCTCACCCTCCCC+AGG + Chr7:77817883-77817902 None:intergenic 60.0%
CCCATCCCTCAACCACCACA+AGG + Chr7:77817396-77817415 None:intergenic 60.0%
CTCCTTGACAGGGACGGAGA+AGG + Chr7:77814545-77814564 None:intergenic 60.0%
GCCCTCCTTGTGGTGGTTGA+GGG - Chr7:77817388-77817407 MsG0780040454.01.T01:intron 60.0%
GGCTGGCACAAGCGGAAAAG+TGG - Chr7:77817904-77817923 MsG0780040454.01.T01:intron 60.0%
GGGGAGGGTGAGACATCCTT+TGG - Chr7:77817883-77817902 MsG0780040454.01.T01:intron 60.0%
GGTGGTTGAGGGATGGGAGA+AGG - Chr7:77817399-77817418 MsG0780040454.01.T01:intron 60.0%
GTGGGTGATGTTGTGGGGGA+CGG + Chr7:77814467-77814486 None:intergenic 60.0%
TGAGGGATGGGAGAAGGCTG+AGG - Chr7:77817405-77817424 MsG0780040454.01.T01:intron 60.0%
TGCCCTCCTTGTGGTGGTTG+AGG - Chr7:77817387-77817406 MsG0780040454.01.T01:intron 60.0%
! AGTTGAGGAAGGCGCGTTGG+AGG - Chr7:77818303-77818322 MsG0780040454.01.T01:intron 60.0%
! CTCAGTTGAGGAAGGCGCGT+TGG - Chr7:77818300-77818319 MsG0780040454.01.T01:intron 60.0%
! GTTGAGGAAGGCGCGTTGGA+GGG - Chr7:77818304-77818323 MsG0780040454.01.T01:intron 60.0%
! TAGGATGGCTGTGCCGCTGA+GGG - Chr7:77814672-77814691 MsG0780040454.01.T01:three_prime_UTR 60.0%
! TTAGGATGGCTGTGCCGCTG+AGG - Chr7:77814671-77814690 MsG0780040454.01.T01:three_prime_UTR 60.0%
!! GGGGAAGGCTTTGGAGGGAA+TGG + Chr7:77817018-77817037 None:intergenic 60.0%
!! TGGTGGTGGTGCTGGTGGTT+TGG + Chr7:77814444-77814463 None:intergenic 60.0%
GATGTTGTGGGGGACGGTGG+TGG + Chr7:77814461-77814480 None:intergenic 65.0%
GGTGATGTTGTGGGGGACGG+TGG + Chr7:77814464-77814483 None:intergenic 65.0%
! ATCCGGGGAGAGAGCGGACT+TGG + Chr7:77814605-77814624 None:intergenic 65.0%
CGCCAAGTCCGCTCTCTCCC+CGG - Chr7:77814600-77814619 MsG0780040454.01.T01:three_prime_UTR 70.0%
CTTGGCGGCCGTAGGGAGGT+CGG + Chr7:77814587-77814606 None:intergenic 70.0%
! AGAGCGGACTTGGCGGCCGT+AGG + Chr7:77814595-77814614 None:intergenic 70.0%
! CGGGGAGAGAGCGGACTTGG+CGG + Chr7:77814602-77814621 None:intergenic 70.0%
! GAGCGGACTTGGCGGCCGTA+GGG + Chr7:77814594-77814613 None:intergenic 70.0%
! GTTGTGGGGGACGGTGGTGG+TGG + Chr7:77814458-77814477 None:intergenic 70.0%
!! GACGGTGGTGGTGGTGCTGG+TGG + Chr7:77814449-77814468 None:intergenic 70.0%
CGGACTTGGCGGCCGTAGGG+AGG + Chr7:77814591-77814610 None:intergenic 75.0%
!! GGGGACGGTGGTGGTGGTGC+TGG + Chr7:77814452-77814471 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 77814379 77819166 77814379 ID=MsG0780040454.01;Name=MsG0780040454.01
Chr7 mRNA 77814379 77819166 77814379 ID=MsG0780040454.01.T01;Parent=MsG0780040454.01;Name=MsG0780040454.01.T01;_AED=0.33;_eAED=0.34;_QI=0|0.33|0.25|1|0.33|0.25|4|707|334
Chr7 exon 77814379 77815240 77814379 ID=MsG0780040454.01.T01:exon:14999;Parent=MsG0780040454.01.T01
Chr7 exon 77815545 77815898 77815545 ID=MsG0780040454.01.T01:exon:14998;Parent=MsG0780040454.01.T01
Chr7 exon 77818032 77818084 77818032 ID=MsG0780040454.01.T01:exon:14997;Parent=MsG0780040454.01.T01
Chr7 exon 77818724 77819166 77818724 ID=MsG0780040454.01.T01:exon:14996;Parent=MsG0780040454.01.T01
Chr7 CDS 77818724 77819166 77818724 ID=MsG0780040454.01.T01:cds;Parent=MsG0780040454.01.T01
Chr7 CDS 77818032 77818084 77818032 ID=MsG0780040454.01.T01:cds;Parent=MsG0780040454.01.T01
Chr7 CDS 77815545 77815898 77815545 ID=MsG0780040454.01.T01:cds;Parent=MsG0780040454.01.T01
Chr7 CDS 77815086 77815240 77815086 ID=MsG0780040454.01.T01:cds;Parent=MsG0780040454.01.T01
Chr7 three_prime_UTR 77814379 77815085 77814379 ID=MsG0780040454.01.T01:three_prime_utr;Parent=MsG0780040454.01.T01
Gene Sequence

>MsG0780040454.01.T01

ATGCCTTACCTCATCCGTGAAAACCTCTTCATCAGCAACATCATCGACGCTGCCGAAATTCTCCAAACCACCAGCACCACCACCACCGTCCCCCACAACATCACCCACATCCTCTCCGTTCTCAGCTCCGCTTCCATCTCCTTCTTCTCCGAATGGCGTTCTTCCTTCTCCGTCCCTGTCAAGGAGATCTCCAAAGTTCATGTCTCCGACCTCCCTACGGCCGCCAAGTCCGCTCTCTCCCCGGATAAGCTTCTGTACTCGTTGGAATACGCCGGGGAAGATTTTAAGCTTGTTAGGATGGCTGTGCCGCTGAGGGATACTGAGAGTGAAAATTTGTTGGATTACCTCGAAGTTTGTGTTGATTTTATTGAGAGGAGTAGGAAAGAAGGTTCTGTTTTGGTTCATTGTTTCGCTGGTGTTTCTAGAAGGTTCTATTCTTCACTTGCAGCGGTTATTACGGCCTATTTGATGAAAAGCGAAAATTTGTCACTAGAAGCTAGTAATTTATGTCATCTGAGGAACGAAATATCTCTCCTTTTTTCAGGTGAGAATCATTTCTCAGGGTCGAGGATAGACAGTTCTAAGCTTGGTGCAGATCCTGGCATGCCTGTTGAAACTTCTTCAGAGGTGGGAGAAGCTACTAAAGTAGAAAATAATCGTAGTCCTACATATCGCTGCAAGAAGTGCCGTCGTATTGTTGCATTGCAAGAACATGTCGTAGATCATATTCCTGGGGAGGGTGAGACATCCTTTGGCTGGCACAAGCGGAAAAGTGGCAATCCTTTTAACAAGTCTAATGAATCTGAGTGTTCGTCCATATTTATTGAGCCTCTACGGTGGATGAAAGATGTTGAGGAAGGCGCGTTGGAGGGAAAACTGTCCTGTGCTCATTGTGATGCCCGTTTGGGATACTTCAATTGGGCAGGCATACAATGCAGCTGTGGAAGCTGGATAACACCAGCTTTTCAACTACACAAAAGTCGGGTAGATATAAGCCCCATGTAA
Protein sequence

>MsG0780040454.01.T01

MPYLIRENLFISNIIDAAEILQTTSTTTTVPHNITHILSVLSSASISFFSEWRSSFSVPVKEISKVHVSDLPTAAKSALSPDKLLYSLEYAGEDFKLVRMAVPLRDTESENLLDYLEVCVDFIERSRKEGSVLVHCFAGVSRRFYSSLAAVITAYLMKSENLSLEASNLCHLRNEISLLFSGENHFSGSRIDSSKLGADPGMPVETSSEVGEATKVENNRSPTYRCKKCRRIVALQEHVVDHIPGEGETSFGWHKRKSGNPFNKSNESECSSIFIEPLRWMKDVEEGALEGKLSCAHCDARLGYFNWAGIQCSCGSWITPAFQLHKSRVDISPM*