AlfalfaGEDB | MsG0180000842.01

M. sativa cultivar ZhongmuNo.1 / MsG0180000842.01

KEGG: K24917
GO: -
PFAM: PF01490

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000842.01.T01	KAE9458834.1	63.692	325	116	2	9	333	40	362	8.86E-152	441

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000842.01.T01	P92934	63.83	235	85	0	100	334	246	480	5.04E-110	332

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000842.01.T01	A0A6A4LRM1	63.692	325	116	2	9	333	40	362	4.23e-152	441

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000842.01	MsG0180001795.01	-0.808821	2.565266e-50	1.481510e-47
MsG0180000842.01	MsG0480018497.01	0.803882	2.819091e-49	1.432987e-46
MsG0180000842.01	MsG0480021249.01	-0.811406	7.112429e-51	4.399098e-48
MsG0180000842.01	MsG0480021476.01	0.844368	7.896526e-59	1.271910e-55
MsG0180000842.01	MsG0580025052.01	0.838525	2.730786e-57	3.667262e-54
MsG0180000842.01	MsG0780040454.01	0.834651	2.649817e-56	3.164536e-53
MsG0180000842.01	MsG0780040523.01	0.840001	1.130992e-57	1.589519e-54
MsG0180000842.01	MsG0880047575.01	0.813848	2.078872e-51	1.372751e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000842.01.T01	MTR_1g007380	81.413	269	47	3	70	336	205	472	3.61e-149	428
MsG0180000842.01.T01	MTR_1g007380	86.364	88	11	1	9	96	26	112	5.90e-42	152
MsG0180000842.01.T01	MTR_3g110660	69.355	248	74	2	90	336	236	482	1.51e-120	356
MsG0180000842.01.T01	MTR_3g110660	80.682	88	16	1	9	96	36	122	1.41e-38	143
MsG0180000842.01.T01	MTR_1g105980	47.588	311	153	4	27	335	168	470	1.49e-94	289
MsG0180000842.01.T01	MTR_1g105980	61.364	88	33	1	9	96	25	111	5.37e-28	114
MsG0180000842.01.T01	MTR_1g106000	53.689	244	105	1	100	335	229	472	3.76e-90	278
MsG0180000842.01.T01	MTR_1g106000	61.364	88	33	1	9	96	18	104	2.19e-28	115
MsG0180000842.01.T01	MTR_1g105990	55.844	231	100	1	100	328	235	465	4.61e-87	270
MsG0180000842.01.T01	MTR_1g105990	64.773	88	30	1	9	96	24	110	4.71e-30	119
MsG0180000842.01.T01	MTR_1g105995	52.245	245	115	2	90	333	224	467	9.64e-87	269
MsG0180000842.01.T01	MTR_1g105995	74.286	70	18	0	9	78	24	93	2.25e-26	109
MsG0180000842.01.T01	MTR_4g073520	50.806	248	120	2	87	333	263	509	3.65e-84	263
MsG0180000842.01.T01	MTR_4g073520	41.429	140	78	2	9	148	62	197	3.23e-25	106
MsG0180000842.01.T01	MTR_4g073520	50.806	248	120	2	87	333	263	509	4.83e-84	263
MsG0180000842.01.T01	MTR_4g073520	41.429	140	78	2	9	148	62	197	2.44e-25	106
MsG0180000842.01.T01	MTR_3g088455	50.420	238	117	1	96	333	240	476	1.82e-82	258
MsG0180000842.01.T01	MTR_3g088455	58.889	90	36	1	9	98	37	125	1.55e-27	112
MsG0180000842.01.T01	MTR_8g094290	51.271	236	111	2	100	335	243	474	7.87e-82	256
MsG0180000842.01.T01	MTR_8g094290	62.500	88	32	1	9	96	34	120	1.89e-26	109
MsG0180000842.01.T01	MTR_3g088475	50.420	238	118	0	96	333	240	477	8.22e-81	254
MsG0180000842.01.T01	MTR_3g088475	52.941	102	47	1	9	110	37	137	2.20e-27	112
MsG0180000842.01.T01	MTR_3g096800	48.374	246	123	2	90	335	235	476	2.04e-78	248
MsG0180000842.01.T01	MTR_3g096800	56.667	90	38	1	9	98	36	124	9.69e-24	101
MsG0180000842.01.T01	MTR_1g029750	49.576	236	117	2	100	334	247	481	2.59e-73	234
MsG0180000842.01.T01	MTR_1g029750	65.116	86	29	1	13	98	42	126	9.32e-28	113
MsG0180000842.01.T01	MTR_3g096840	47.257	237	121	2	96	332	247	479	8.10e-71	228
MsG0180000842.01.T01	MTR_3g096840	43.357	143	77	2	9	151	42	180	3.10e-24	103
MsG0180000842.01.T01	MTR_5g096840	43.498	223	125	1	100	322	240	461	2.51e-67	219
MsG0180000842.01.T01	MTR_5g096840	52.113	71	33	1	13	82	36	106	1.30e-16	80.9
MsG0180000842.01.T01	MTR_3g110420	39.024	287	169	4	52	336	189	471	6.98e-67	218
MsG0180000842.01.T01	MTR_3g110420	54.545	88	39	1	9	96	27	113	5.03e-23	99.8
MsG0180000842.01.T01	MTR_3g096830	47.934	242	120	3	91	332	229	464	1.32e-66	217
MsG0180000842.01.T01	MTR_3g096830	61.111	90	34	1	9	98	29	117	2.03e-25	106
MsG0180000842.01.T01	MTR_3g461440	43.363	226	127	1	100	325	96	320	8.66e-66	210
MsG0180000842.01.T01	MTR_3g061390	44.395	223	123	1	100	322	233	454	8.27e-65	212
MsG0180000842.01.T01	MTR_3g061390	54.217	83	38	0	9	91	26	108	1.36e-21	95.5
MsG0180000842.01.T01	MTR_3g461440	43.946	223	124	1	100	322	233	454	1.30e-64	211
MsG0180000842.01.T01	MTR_3g461440	56.250	80	35	0	9	88	26	105	9.66e-23	99.0
MsG0180000842.01.T01	MTR_3g461470	43.498	223	125	1	100	322	233	454	2.93e-64	211
MsG0180000842.01.T01	MTR_3g461470	56.250	80	35	0	9	88	26	105	1.10e-22	98.6
MsG0180000842.01.T01	MTR_3g110430	42.248	258	147	2	75	332	247	502	7.49e-64	211
MsG0180000842.01.T01	MTR_3g110430	60.465	86	33	1	13	98	68	152	1.06e-23	102
MsG0180000842.01.T01	MTR_3g461430	43.498	223	125	1	100	322	240	461	1.44e-63	210
MsG0180000842.01.T01	MTR_3g461430	56.250	80	35	0	9	88	33	112	1.48e-22	98.6
MsG0180000842.01.T01	MTR_1g007270	41.880	234	130	2	100	333	243	470	2.25e-63	208
MsG0180000842.01.T01	MTR_1g007270	55.556	90	38	2	9	98	36	123	2.79e-21	94.7
MsG0180000842.01.T01	MTR_3g461480	42.500	240	136	2	90	328	227	465	8.55e-63	207
MsG0180000842.01.T01	MTR_3g461480	38.686	137	81	3	9	144	30	164	4.11e-19	88.2
MsG0180000842.01.T01	MTR_1g007180	34.768	302	185	7	36	336	167	457	1.77e-59	198
MsG0180000842.01.T01	MTR_1g007180	55.952	84	36	1	13	96	19	101	2.61e-23	100
MsG0180000842.01.T01	MTR_1g007180	38.132	257	151	5	81	336	124	373	3.67e-59	195
MsG0180000842.01.T01	MTR_1g007240	32.895	304	188	6	36	336	167	457	1.17e-56	191
MsG0180000842.01.T01	MTR_1g007240	55.952	84	36	1	13	96	19	101	1.95e-22	97.8
MsG0180000842.01.T01	MTR_2g031750	33.775	302	188	7	36	336	100	390	1.17e-55	186
MsG0180000842.01.T01	MTR_2g031750	33.775	302	188	7	36	336	167	457	3.53e-55	187
MsG0180000842.01.T01	MTR_2g031750	42.553	141	77	3	13	153	19	155	1.30e-24	103
MsG0180000842.01.T01	MTR_5g096850	37.778	225	139	1	100	324	236	459	4.06e-55	187
MsG0180000842.01.T01	MTR_5g096850	38.168	131	78	3	9	137	28	157	6.00e-18	84.7
MsG0180000842.01.T01	MTR_3g110660	80.682	88	16	1	9	96	36	122	1.73e-39	143
MsG0180000842.01.T01	MTR_3g110660	62.963	108	38	2	90	196	236	342	1.11e-33	128
MsG0180000842.01.T01	MTR_3g088465	46.897	145	77	0	96	240	240	384	1.74e-38	141
MsG0180000842.01.T01	MTR_3g088465	54.902	102	45	1	9	110	37	137	6.84e-28	112
MsG0180000842.01.T01	MTR_6g022790	31.799	239	129	9	100	330	240	452	5.09e-24	102
MsG0180000842.01.T01	MTR_3g110420	56.962	79	34	0	9	87	27	105	1.55e-23	99.8
MsG0180000842.01.T01	MTR_3g110420	37.162	148	88	3	52	197	189	333	2.19e-21	93.6
MsG0180000842.01.T01	MTR_4g103890	27.723	303	167	10	40	330	158	420	4.16e-22	96.7
MsG0180000842.01.T01	MTR_5g017200	58.824	85	29	2	12	96	34	112	6.74e-22	94.0
MsG0180000842.01.T01	MTR_8g080120	28.279	244	135	9	100	332	221	435	4.77e-21	93.6
MsG0180000842.01.T01	MTR_2g101920	30.882	204	111	7	100	297	246	425	3.83e-20	91.3
MsG0180000842.01.T01	MTR_1g007190	53.659	82	36	2	17	98	21	100	3.12e-19	85.1
MsG0180000842.01.T01	MTR_2g096830	28.523	298	152	14	55	330	167	425	4.85e-17	82.0
MsG0180000842.01.T01	MTR_1g070470	26.891	238	151	7	100	333	220	438	1.84e-16	80.1
MsG0180000842.01.T01	MTR_6g023065	28.522	291	160	12	55	330	203	460	3.55e-16	79.3
MsG0180000842.01.T01	MTR_6g022780	31.496	254	133	11	91	330	199	425	4.77e-16	79.0
MsG0180000842.01.T01	MTR_3g005740	29.362	235	140	4	100	330	254	466	2.46e-15	77.0
MsG0180000842.01.T01	MTR_6g023075	30.315	254	136	11	91	330	199	425	4.75e-15	75.9
MsG0180000842.01.T01	MTR_5g054730	28.870	239	136	10	100	330	224	436	6.83e-14	72.4
MsG0180000842.01.T01	MTR_1g093020	28.033	239	138	9	100	330	222	434	9.20e-14	72.0
MsG0180000842.01.T01	MTR_1g093030	27.660	235	144	7	100	330	222	434	1.24e-13	71.6
MsG0180000842.01.T01	MTR_7g038910	29.707	239	134	9	100	330	228	440	1.65e-12	68.6
MsG0180000842.01.T01	MTR_1g093020	29.412	204	114	7	100	297	222	401	2.44e-12	67.8
MsG0180000842.01.T01	MTR_2g096830	30.769	169	86	9	55	208	167	319	4.28e-12	66.6
MsG0180000842.01.T01	MTR_5g081630	24.291	247	161	8	89	332	157	380	6.80e-12	66.2
MsG0180000842.01.T01	MTR_3g115090	25.424	236	139	8	100	322	287	498	6.97e-12	66.6
MsG0180000842.01.T01	MTR_3g085820	33.333	132	78	4	82	206	208	336	7.86e-12	66.2
MsG0180000842.01.T01	MTR_7g038910	34.454	119	65	5	100	212	228	339	1.61e-11	65.1
MsG0180000842.01.T01	MTR_7g038910	35.398	113	60	5	100	206	228	333	1.86e-11	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000842.01.T01	AT5G49630	63.830	235	85	0	100	334	246	480	5.14e-111	332
MsG0180000842.01.T01	AT5G49630	78.409	88	18	1	9	96	35	121	3.75e-37	139
MsG0180000842.01.T01	AT1G58360	57.692	234	98	1	100	333	249	481	5.12e-98	298
MsG0180000842.01.T01	AT1G58360	72.727	88	23	1	9	96	39	125	5.13e-35	133
MsG0180000842.01.T01	AT1G10010	53.878	245	111	2	90	333	230	473	1.07e-90	279
MsG0180000842.01.T01	AT1G10010	68.182	88	27	1	9	96	31	117	2.43e-29	117
MsG0180000842.01.T01	AT1G10010	53.878	245	111	2	90	333	229	472	1.24e-90	279
MsG0180000842.01.T01	AT1G10010	68.182	88	27	1	9	96	30	116	2.74e-29	117
MsG0180000842.01.T01	AT5G09220	51.489	235	112	2	100	333	257	490	6.74e-82	257
MsG0180000842.01.T01	AT5G09220	64.773	88	30	1	9	96	48	134	1.08e-27	113
MsG0180000842.01.T01	AT5G63850	50.638	235	114	2	100	333	230	463	1.76e-81	255
MsG0180000842.01.T01	AT5G63850	72.000	75	21	0	8	82	20	94	2.08e-29	117
MsG0180000842.01.T01	AT1G77380	47.940	267	134	3	70	335	213	475	1.01e-76	243
MsG0180000842.01.T01	AT1G77380	64.444	90	31	1	9	98	32	120	1.49e-28	115
MsG0180000842.01.T01	AT1G44100	45.763	236	127	1	100	335	245	479	1.22e-75	241
MsG0180000842.01.T01	AT1G44100	62.222	90	33	1	9	98	30	118	8.15e-28	113
MsG0180000842.01.T01	AT5G23810	43.388	242	129	3	88	322	221	461	1.43e-53	182
MsG0180000842.01.T01	AT5G23810	39.583	144	84	3	9	151	28	169	2.90e-20	91.7
MsG0180000842.01.T01	AT5G23810	47.899	119	56	2	88	201	221	338	7.33e-24	100
MsG0180000842.01.T01	AT5G23810	39.583	144	84	3	9	151	28	169	1.16e-20	92.0
MsG0180000842.01.T01	AT5G23810	39.583	144	84	3	9	151	28	169	7.77e-22	92.8
MsG0180000842.01.T01	AT5G23810	39.583	144	84	3	9	151	28	169	7.77e-22	92.8
MsG0180000842.01.T01	AT5G23810	39.583	144	84	3	9	151	28	169	2.81e-21	92.0
MsG0180000842.01.T01	AT5G40780	28.631	241	134	10	100	330	183	395	4.10e-20	90.9
MsG0180000842.01.T01	AT5G40780	28.631	241	134	10	100	330	183	395	4.10e-20	90.9
MsG0180000842.01.T01	AT5G40780	28.750	240	133	10	101	330	232	443	6.16e-20	90.5
MsG0180000842.01.T01	AT1G24400	31.557	244	127	9	100	332	226	440	1.00e-19	90.1
MsG0180000842.01.T01	AT1G61270	26.471	238	137	7	100	327	233	442	2.22e-16	80.1
MsG0180000842.01.T01	AT1G67640	30.544	239	136	7	100	332	226	440	4.77e-16	79.0
MsG0180000842.01.T01	AT3G01760	24.569	232	136	7	93	313	220	423	1.21e-14	75.1
MsG0180000842.01.T01	AT1G25530	30.435	230	125	8	100	322	225	426	4.01e-13	70.5

Find 83 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCATTGCAGTTCACTTAAT+TGG	0.155939	1:+11943801	MsG0180000842.01.T01:CDS
GCCCTCAACAAAGCCAAATA+TGG	0.195969	1:-11944062	None:intergenic
ATGAAGAGAGCAAGTTTAAT+TGG	0.201285	1:+11943643	MsG0180000842.01.T01:CDS
AATGATTTCTTGGGACTAAT+TGG	0.215440	1:+11944244	MsG0180000842.01.T01:CDS
GTCCATGTGAATGAATATTT+TGG	0.215858	1:-11944334	None:intergenic
GTCTTTGTCCAACCCATATT+TGG	0.233068	1:+11944049	MsG0180000842.01.T01:CDS
TCCATTCTTCAATGATTTCT+TGG	0.247047	1:+11944234	MsG0180000842.01.T01:CDS
TGAATTACTTTAGAGTAATA+TGG	0.287002	1:+11944167	MsG0180000842.01.T01:CDS
TTCTTAATGTACATTTCTAT+AGG	0.295334	1:-11944301	None:intergenic
TGCAGTACCTCTACCCCATT+TGG	0.300092	1:-11943367	None:intergenic
GCTATGAATATTCCACTATA+TGG	0.304768	1:+11944133	MsG0180000842.01.T01:CDS
AAGAAGAGTGGAAGTGAAAT+AGG	0.305312	1:-11941879	None:intergenic
CCATTCTTCAATGATTTCTT+GGG	0.308680	1:+11944235	MsG0180000842.01.T01:CDS
GCACAAATGGGTTGGGTTGC+TGG	0.310749	1:+11941824	MsG0180000842.01.T01:CDS
ATAACGGCTGTGATTGGTTC+TGG	0.315179	1:+11941776	MsG0180000842.01.T01:CDS
ATAGGGAAGTAAACGGTTAA+TGG	0.315363	1:-11944283	None:intergenic
GCATTGCAGTTCACTTAATT+GGG	0.317175	1:+11943802	MsG0180000842.01.T01:CDS
ACCTTAGGTTATGCTGCATT+TGG	0.323218	1:+11943702	MsG0180000842.01.T01:CDS
TTCTGGAGGGCTTGATTTCA+AGG	0.324342	1:-11943611	None:intergenic
CCATTCACAAATTTGCTATC+TGG	0.327211	1:-11944103	None:intergenic
AAGGTTATACTTATAAAGAT+TGG	0.347034	1:-11944811	None:intergenic
CGTTCACCTGATCCTGTTCA+TGG	0.347145	1:+11941914	MsG0180000842.01.T01:CDS
TTGGTTTCTATGAGCCCTTT+TGG	0.350564	1:+11943757	MsG0180000842.01.T01:CDS
TTAAACTATATGCACTATAT+AGG	0.373840	1:+11944683	MsG0180000842.01.T01:three_prime_UTR
ACATTATAGCTTCCATATAG+TGG	0.375753	1:-11944145	None:intergenic
CCCATATTTGGCTTTGTTGA+GGG	0.384429	1:+11944061	MsG0180000842.01.T01:CDS
TAGTTTCTCTTGCCATGAAC+AGG	0.388780	1:-11941926	None:intergenic
AGCATGGGCAATTGCACAAA+TGG	0.391852	1:+11941811	MsG0180000842.01.T01:CDS
CAATAAGCACTTGATCATAA+TGG	0.404848	1:-11944581	None:intergenic
TATGTGCTATGTGGAACCTT+AGG	0.410854	1:+11943687	MsG0180000842.01.T01:CDS
ATTTCTATTATCTCAGCTGC+TGG	0.412886	1:+11944391	MsG0180000842.01.T01:CDS
CAGTAAATAATTTACTTGCC+TGG	0.418679	1:-11943467	None:intergenic
GCAGTACCTCTACCCCATTT+GGG	0.426312	1:-11943366	None:intergenic
TCATAATGGTACAATATACT+TGG	0.430224	1:-11944567	None:intergenic
TCTTAATGTACATTTCTATA+GGG	0.430781	1:-11944300	None:intergenic
CATATTATAACGGCTGTGAT+TGG	0.431871	1:+11941770	MsG0180000842.01.T01:CDS
TGGAAACAACATGGCAATGA+TGG	0.436483	1:-11944215	None:intergenic
GTAAACGGTTAATGGATAGA+AGG	0.436951	1:-11944275	None:intergenic
AACAGAAACTGGGTCCCAAA+TGG	0.437213	1:+11943352	MsG0180000842.01.T01:intron
CTCTTGCCATGAACAGGATC+AGG	0.437839	1:-11941920	None:intergenic
TAAGGTGCTCATTGAGATCC+AGG	0.438684	1:+11943449	MsG0180000842.01.T01:CDS
AAGCTTTATATAAACTAAAG+AGG	0.439354	1:+11944782	MsG0180000842.01.T01:three_prime_UTR
ACAGAAACTGGGTCCCAAAT+GGG	0.439554	1:+11943353	MsG0180000842.01.T01:intron
ACCCATATTTGGCTTTGTTG+AGG	0.440307	1:+11944060	MsG0180000842.01.T01:CDS
GGCAAAGTCTATTAGCCAAA+AGG	0.440455	1:-11943772	None:intergenic
AATCCTGTGAGAAAATTTCC+TGG	0.449333	1:-11943735	None:intergenic
GGCAATTGCACAAATGGGTT+GGG	0.449599	1:+11941817	MsG0180000842.01.T01:CDS
TCAGCTGCTGGATCAATTCA+AGG	0.457275	1:+11944403	MsG0180000842.01.T01:CDS
CCCTCAACAAAGCCAAATAT+GGG	0.466684	1:-11944061	None:intergenic
TGTGGAGATGTTCCAGCTAT+TGG	0.468095	1:+11943399	MsG0180000842.01.T01:CDS
GGGCAATTGCACAAATGGGT+TGG	0.468496	1:+11941816	MsG0180000842.01.T01:CDS
TCACTTAATTGGGGCATACC+AGG	0.476849	1:+11943812	MsG0180000842.01.T01:CDS
CCCAAGAAATCATTGAAGAA+TGG	0.488214	1:-11944235	None:intergenic
GCAAAGTCTATTAGCCAAAA+GGG	0.493348	1:-11943771	None:intergenic
CATTTCTATAGGGAAGTAAA+CGG	0.499195	1:-11944290	None:intergenic
AATGCAATGTCACCAATAGC+TGG	0.499504	1:-11943411	None:intergenic
CTTGGCTCAAGATATTAAGT+TGG	0.518945	1:+11944356	MsG0180000842.01.T01:CDS
AATATTCATTCACATGGACT+TGG	0.526623	1:+11944338	MsG0180000842.01.T01:CDS
GAAAATGCAAAGAGAACTGC+AGG	0.527167	1:-11941848	None:intergenic
GCATGGGCAATTGCACAAAT+GGG	0.527749	1:+11941812	MsG0180000842.01.T01:CDS
CCAGATAGCAAATTTGTGAA+TGG	0.528974	1:+11944103	MsG0180000842.01.T01:CDS
CTGGGTCCCAAATGGGGTAG+AGG	0.529175	1:+11943360	MsG0180000842.01.T01:CDS
TCCAAATGCAGCATAACCTA+AGG	0.534958	1:-11943703	None:intergenic
TATCATTGTTCTCCTCTGAA+AGG	0.535151	1:-11944454	None:intergenic
TGCTAGTGCACATATTATAA+CGG	0.539503	1:+11941760	MsG0180000842.01.T01:CDS
AGTAATATTGTACTCCATGT+AGG	0.545325	1:-11944623	None:intergenic
CAACAAAGCCAAATATGGGT+TGG	0.564594	1:-11944057	None:intergenic
CATTGCAGTTCACTTAATTG+GGG	0.570061	1:+11943803	MsG0180000842.01.T01:CDS
GTGAACTGCAATGCAAACAT+TGG	0.597294	1:-11943793	None:intergenic
CAGCTGCTGGATCAATTCAA+GGG	0.598708	1:+11944404	MsG0180000842.01.T01:CDS
TGCCAAAATATTCATTCACA+TGG	0.602274	1:+11944332	MsG0180000842.01.T01:CDS
CAGAAACTGGGTCCCAAATG+GGG	0.604459	1:+11943354	MsG0180000842.01.T01:intron
ATGTTCCTGCAACAGAAACT+GGG	0.607681	1:+11943342	MsG0180000842.01.T01:intron
ATTACTTTAGAGTAATATGG+AGG	0.616387	1:+11944170	MsG0180000842.01.T01:CDS
TTTGTGAATTTGAAGGGACA+TGG	0.631027	1:+11941732	MsG0180000842.01.T01:CDS
GTAACAATCAGCAAGAAGAG+TGG	0.632602	1:-11941891	None:intergenic
CATGAACAGGATCAGGTGAA+CGG	0.635139	1:-11941913	None:intergenic
GCATTTGGAAATGATGCACC+AGG	0.647793	1:+11943717	MsG0180000842.01.T01:CDS
GTAGAGGTACTGCAACAGAA+AGG	0.657898	1:+11943376	MsG0180000842.01.T01:CDS
GGTACTGCAACAGAAAGGTG+TGG	0.667322	1:+11943381	MsG0180000842.01.T01:CDS
AAGACATACAAACCTTTCAG+AGG	0.672597	1:+11944442	MsG0180000842.01.T01:CDS
ATTGAAGAATGGAAACAACA+TGG	0.695752	1:-11944224	None:intergenic
GAGAAACTACACTTACACTG+AGG	0.781023	1:+11941940	MsG0180000842.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATCTAATTTACAAATTTAAA+CGG	+	Chr1:11943957-11943976	MsG0180000842.01.T01:intron	10.0%
!!	TATTAATTGTAAGATTTAAA+TGG	-	Chr1:11943515-11943534	None:intergenic	10.0%
!!!	ATTATTTACTGATTTATATA+TGG	+	Chr1:11943479-11943498	MsG0180000842.01.T01:intron	10.0%
!!!	GGTTAAATTATTAATATTTT+AGG	-	Chr1:11943856-11943875	None:intergenic	10.0%
!!!	TTATTCATATTTTTTTGAAA+GGG	+	Chr1:11943156-11943175	MsG0180000842.01.T01:intron	10.0%
!!!	TTTAATTTACAACTATTTTT+GGG	-	Chr1:11944668-11944687	None:intergenic	10.0%
!!!	TTTATTCATATTTTTTTGAA+AGG	+	Chr1:11943155-11943174	MsG0180000842.01.T01:intron	10.0%
!!	AAGATGATTTATTTAATAAG+AGG	+	Chr1:11942812-11942831	MsG0180000842.01.T01:intron	15.0%
!!	AATAATGAAACAAATTGATT+AGG	-	Chr1:11943275-11943294	None:intergenic	15.0%
!!	ATTCATCAAGTATAAATATT+AGG	-	Chr1:11942278-11942297	None:intergenic	15.0%
!!	ATTTGTTTCATTATTTATCA+GGG	+	Chr1:11943280-11943299	MsG0180000842.01.T01:intron	15.0%
!!!	AATTTGTTTCATTATTTATC+AGG	+	Chr1:11943279-11943298	MsG0180000842.01.T01:intron	15.0%
!!!	GAAATAATTATATTTTGTGT+TGG	-	Chr1:11942430-11942449	None:intergenic	15.0%
!!!	GTAATTCAATTTTTTTAGTA+TGG	-	Chr1:11943092-11943111	None:intergenic	15.0%
!!!	GTTTAATTTACAACTATTTT+TGG	-	Chr1:11944669-11944688	None:intergenic	15.0%
!!	AAATTACAAGTAAAATTGAG+AGG	-	Chr1:11943934-11943953	None:intergenic	20.0%
!!	AAGGTTATACTTATAAAGAT+TGG	-	Chr1:11944814-11944833	None:intergenic	20.0%
!!	AAGTTATTTATTTAGTACCT+AGG	-	Chr1:11941979-11941998	None:intergenic	20.0%
!!	ATTCAACTATTGTTAGTATA+AGG	-	Chr1:11942862-11942881	None:intergenic	20.0%
!!	CATGTGACAAATTAAATTAA+AGG	-	Chr1:11942515-11942534	None:intergenic	20.0%
!!	GGCAAAGAAAAATAAAAATA+GGG	-	Chr1:11944502-11944521	None:intergenic	20.0%
!!	TATACTAACAATAGTTGAAT+AGG	+	Chr1:11942862-11942881	MsG0180000842.01.T01:intron	20.0%
!!	TCAAAAATGGTTGAATTATT+GGG	-	Chr1:11943200-11943219	None:intergenic	20.0%
!!	TCACTTTAAGTAAAATTTCA+AGG	-	Chr1:11942164-11942183	None:intergenic	20.0%
!!	TCTTAAGTTATTTATTTACC+TGG	-	Chr1:11943833-11943852	None:intergenic	20.0%
!!	TCTTAATGTACATTTCTATA+GGG	-	Chr1:11944303-11944322	None:intergenic	20.0%
!!	TGGCAAAGAAAAATAAAAAT+AGG	-	Chr1:11944503-11944522	None:intergenic	20.0%
!!	TTAAACTATATGCACTATAT+AGG	+	Chr1:11944683-11944702	MsG0180000842.01.T01:three_prime_UTR	20.0%
!!	TTCAAAAATGGTTGAATTAT+TGG	-	Chr1:11943201-11943220	None:intergenic	20.0%
!!	TTCTTAATGTACATTTCTAT+AGG	-	Chr1:11944304-11944323	None:intergenic	20.0%
!!!	AAGCTTTATATAAACTAAAG+AGG	+	Chr1:11944782-11944801	MsG0180000842.01.T01:three_prime_UTR	20.0%
!!!	ATACTTTGTTAATTTTCTAG+TGG	+	Chr1:11944474-11944493	MsG0180000842.01.T01:exon	20.0%
!!!	ATTAAACGATTTTCAAGTTT+CGG	-	Chr1:11942077-11942096	None:intergenic	20.0%
!!!	ATTTGCTTATGCTTTTTATA+AGG	+	Chr1:11943431-11943450	MsG0180000842.01.T01:CDS	20.0%
!!!	CTTAAATGCAAACTTTTTTT+TGG	-	Chr1:11944765-11944784	None:intergenic	20.0%
!!!	GAAACTCTTTTTTTTTTTGA+GGG	+	Chr1:11942947-11942966	MsG0180000842.01.T01:intron	20.0%
!!!	TGAAACTCTTTTTTTTTTTG+AGG	+	Chr1:11942946-11942965	MsG0180000842.01.T01:intron	20.0%
!!!	TGAATTACTTTAGAGTAATA+TGG	+	Chr1:11944167-11944186	MsG0180000842.01.T01:CDS	20.0%
!!!	TTTAAGACAAGAAAAATCAT+TGG	-	Chr1:11944523-11944542	None:intergenic	20.0%
!!!	TTTTGATTTGTGAATTTGAA+GGG	+	Chr1:11941726-11941745	MsG0180000842.01.T01:CDS	20.0%
!	AATAACTGCATCAATTAGTA+TGG	+	Chr1:11942619-11942638	MsG0180000842.01.T01:intron	25.0%
!	ACCTACAAGATTTATATACT+GGG	-	Chr1:11942582-11942601	None:intergenic	25.0%
!	ATAAATATTAGGCAATGATC+AGG	-	Chr1:11942267-11942286	None:intergenic	25.0%
!	CAAAAATGGTTGAATTATTG+GGG	-	Chr1:11943199-11943218	None:intergenic	25.0%
!	CGTATGTGTAAATATGTTTA+AGG	+	Chr1:11942676-11942695	MsG0180000842.01.T01:intron	25.0%
!	GAAGTTTCTTATATGGTATT+CGG	+	Chr1:11942047-11942066	MsG0180000842.01.T01:intron	25.0%
!	TAAATATTAGGCAATGATCA+GGG	-	Chr1:11942266-11942285	None:intergenic	25.0%
!	TAGTTTATATGTACTATTGC+AGG	+	Chr1:11943585-11943604	MsG0180000842.01.T01:intron	25.0%
!	TCATAATGGTACAATATACT+TGG	-	Chr1:11944570-11944589	None:intergenic	25.0%
!	TTTGATCATCACTTCAAAAA+TGG	-	Chr1:11943213-11943232	None:intergenic	25.0%
!!!	ATTACTTTAGAGTAATATGG+AGG	+	Chr1:11944170-11944189	MsG0180000842.01.T01:CDS	25.0%
!!!	GTAATGTTTTAGAGCATTTT+TGG	+	Chr1:11942884-11942903	MsG0180000842.01.T01:intron	25.0%
!!!	GTTTTGATTTGTGAATTTGA+AGG	+	Chr1:11941725-11941744	MsG0180000842.01.T01:CDS	25.0%
	AAAATTTCAGCTATGTGGAT+TGG	+	Chr1:11942556-11942575	MsG0180000842.01.T01:intron	30.0%
	AATATTCATTCACATGGACT+TGG	+	Chr1:11944338-11944357	MsG0180000842.01.T01:CDS	30.0%
	AATGATTTCTTGGGACTAAT+TGG	+	Chr1:11944244-11944263	MsG0180000842.01.T01:CDS	30.0%
	ACATTATAGCTTCCATATAG+TGG	-	Chr1:11944148-11944167	None:intergenic	30.0%
	AGTAATATTGTACTCCATGT+AGG	-	Chr1:11944626-11944645	None:intergenic	30.0%
	ATGAAGAGAGCAAGTTTAAT+TGG	+	Chr1:11943643-11943662	MsG0180000842.01.T01:CDS	30.0%
	ATTGAAGAATGGAAACAACA+TGG	-	Chr1:11944227-11944246	None:intergenic	30.0%
	CAATAAGCACTTGATCATAA+TGG	-	Chr1:11944584-11944603	None:intergenic	30.0%
	CACCTACAAGATTTATATAC+TGG	-	Chr1:11942583-11942602	None:intergenic	30.0%
	CAGTAAATAATTTACTTGCC+TGG	-	Chr1:11943470-11943489	None:intergenic	30.0%
	CATTTCTATAGGGAAGTAAA+CGG	-	Chr1:11944293-11944312	None:intergenic	30.0%
	CCATTCTTCAATGATTTCTT+GGG	+	Chr1:11944235-11944254	MsG0180000842.01.T01:CDS	30.0%
	GAAAAAATTCAACACCTACA+TGG	+	Chr1:11944609-11944628	MsG0180000842.01.T01:three_prime_UTR	30.0%
	GCTATGAATATTCCACTATA+TGG	+	Chr1:11944133-11944152	MsG0180000842.01.T01:CDS	30.0%
	GTTAATGTTTAAGTAGCTTG+AGG	+	Chr1:11942025-11942044	MsG0180000842.01.T01:intron	30.0%
	TCCATTCTTCAATGATTTCT+TGG	+	Chr1:11944234-11944253	MsG0180000842.01.T01:CDS	30.0%
	TGCCAAAATATTCATTCACA+TGG	+	Chr1:11944332-11944351	MsG0180000842.01.T01:CDS	30.0%
	TGCTAGTGCACATATTATAA+CGG	+	Chr1:11941760-11941779	MsG0180000842.01.T01:CDS	30.0%
	TTGAATTATTGGGGTAGAAT+TGG	-	Chr1:11943190-11943209	None:intergenic	30.0%
!	AACACATTTTATGTGCTATG+TGG	+	Chr1:11943678-11943697	MsG0180000842.01.T01:CDS	30.0%
!	ACATGATTTTCTTTCATAGG+AGG	+	Chr1:11942530-11942549	MsG0180000842.01.T01:intron	30.0%
!	GTCACATGATTTTCTTTCAT+AGG	+	Chr1:11942527-11942546	MsG0180000842.01.T01:intron	30.0%
!	GTCCATGTGAATGAATATTT+TGG	-	Chr1:11944337-11944356	None:intergenic	30.0%
!	GTTGAATCTTTTCATGTACT+TGG	+	Chr1:11942385-11942404	MsG0180000842.01.T01:intron	30.0%
!!	TACTTAGTCAAAAGTTGATG+AGG	-	Chr1:11942656-11942675	None:intergenic	30.0%
!!!	GAATGAATATTTTGGCATGT+TGG	-	Chr1:11944329-11944348	None:intergenic	30.0%
	AAGAAGAGTGGAAGTGAAAT+AGG	-	Chr1:11941882-11941901	None:intergenic	35.0%
	AAGACATACAAACCTTTCAG+AGG	+	Chr1:11944442-11944461	MsG0180000842.01.T01:CDS	35.0%
	AATCCTGTGAGAAAATTTCC+TGG	-	Chr1:11943738-11943757	None:intergenic	35.0%
	AGCTAATGTGTGATTTCCTA+TGG	+	Chr1:11944022-11944041	MsG0180000842.01.T01:intron	35.0%
	AGGGCCAAAGTAAACAAAAA+TGG	+	Chr1:11944080-11944099	MsG0180000842.01.T01:CDS	35.0%
	ATAGGGAAGTAAACGGTTAA+TGG	-	Chr1:11944286-11944305	None:intergenic	35.0%
	ATGTGTGATTTCCTATGGTT+AGG	+	Chr1:11944027-11944046	MsG0180000842.01.T01:intron	35.0%
	ATTTCTATTATCTCAGCTGC+TGG	+	Chr1:11944391-11944410	MsG0180000842.01.T01:CDS	35.0%
	CAACAAGTCATAGTGTACTA+TGG	-	Chr1:11942928-11942947	None:intergenic	35.0%
	CATATTATAACGGCTGTGAT+TGG	+	Chr1:11941770-11941789	MsG0180000842.01.T01:CDS	35.0%
	CATTGCAGTTCACTTAATTG+GGG	+	Chr1:11943803-11943822	MsG0180000842.01.T01:CDS	35.0%
	CCAGATAGCAAATTTGTGAA+TGG	+	Chr1:11944103-11944122	MsG0180000842.01.T01:CDS	35.0%
	CCCAAGAAATCATTGAAGAA+TGG	-	Chr1:11944238-11944257	None:intergenic	35.0%
	CTTGGCTCAAGATATTAAGT+TGG	+	Chr1:11944356-11944375	MsG0180000842.01.T01:CDS	35.0%
	GCAAAGTCTATTAGCCAAAA+GGG	-	Chr1:11943774-11943793	None:intergenic	35.0%
	GCATTGCAGTTCACTTAATT+GGG	+	Chr1:11943802-11943821	MsG0180000842.01.T01:CDS	35.0%
	GCCCAGTATATAAATCTTGT+AGG	+	Chr1:11942578-11942597	MsG0180000842.01.T01:intron	35.0%
	GCTTGAGGAAGTTTCTTATA+TGG	+	Chr1:11942040-11942059	MsG0180000842.01.T01:intron	35.0%
	GTTTCTTATATGGTATTCGG+TGG	+	Chr1:11942050-11942069	MsG0180000842.01.T01:intron	35.0%
	TATCATTGTTCTCCTCTGAA+AGG	-	Chr1:11944457-11944476	None:intergenic	35.0%
	TGCATTGCAGTTCACTTAAT+TGG	+	Chr1:11943801-11943820	MsG0180000842.01.T01:CDS	35.0%
	TTTGTGAATTTGAAGGGACA+TGG	+	Chr1:11941732-11941751	MsG0180000842.01.T01:CDS	35.0%
!	GGAAATTTTCTCACAGGATT+TGG	+	Chr1:11943738-11943757	MsG0180000842.01.T01:CDS	35.0%
!	GTAAACGGTTAATGGATAGA+AGG	-	Chr1:11944278-11944297	None:intergenic	35.0%
!!	CACATTAGCTTTAGTCATAC+AGG	-	Chr1:11944012-11944031	None:intergenic	35.0%
!!	CCATTCACAAATTTGCTATC+TGG	-	Chr1:11944106-11944125	None:intergenic	35.0%
!!	TGGAGTTTTATCACTAGCAT+GGG	+	Chr1:11941796-11941815	MsG0180000842.01.T01:CDS	35.0%
!!!	CTGGCCATTTTTGTTTACTT+TGG	-	Chr1:11944087-11944106	None:intergenic	35.0%
	AATCTTGTAGGTGTGACCAT+CGG	+	Chr1:11942590-11942609	MsG0180000842.01.T01:intron	40.0%
	AATGCAATGTCACCAATAGC+TGG	-	Chr1:11943414-11943433	None:intergenic	40.0%
	ACCTTAGGTTATGCTGCATT+TGG	+	Chr1:11943702-11943721	MsG0180000842.01.T01:CDS	40.0%
	ATGTTCCTGCAACAGAAACT+GGG	+	Chr1:11943342-11943361	MsG0180000842.01.T01:intron	40.0%
	ATTAAGCGTCTCATCACATG+TGG	-	Chr1:11942239-11942258	None:intergenic	40.0%
	CAACAAAGCCAAATATGGGT+TGG	-	Chr1:11944060-11944079	None:intergenic	40.0%
	CCCTCAACAAAGCCAAATAT+GGG	-	Chr1:11944064-11944083	None:intergenic	40.0%
	GAAAATGCAAAGAGAACTGC+AGG	-	Chr1:11941851-11941870	None:intergenic	40.0%
	GAGAAACTACACTTACACTG+AGG	+	Chr1:11941940-11941959	MsG0180000842.01.T01:CDS	40.0%
	GGCAAAGTCTATTAGCCAAA+AGG	-	Chr1:11943775-11943794	None:intergenic	40.0%
	GGCAGAAAATTTCAGCTATG+TGG	+	Chr1:11942551-11942570	MsG0180000842.01.T01:intron	40.0%
	GTAACAATCAGCAAGAAGAG+TGG	-	Chr1:11941894-11941913	None:intergenic	40.0%
	GTCCAAGATCAAACCTTACT+GGG	+	Chr1:11943305-11943324	MsG0180000842.01.T01:intron	40.0%
	GTCTTTGTCCAACCCATATT+TGG	+	Chr1:11944049-11944068	MsG0180000842.01.T01:CDS	40.0%
	GTGAACTGCAATGCAAACAT+TGG	-	Chr1:11943796-11943815	None:intergenic	40.0%
	TACTCGTCCTCACAATTGAT+TGG	+	Chr1:11942120-11942139	MsG0180000842.01.T01:intron	40.0%
	TAGTTTCTCTTGCCATGAAC+AGG	-	Chr1:11941929-11941948	None:intergenic	40.0%
	TATGTGCTATGTGGAACCTT+AGG	+	Chr1:11943687-11943706	MsG0180000842.01.T01:CDS	40.0%
	TCCAAATGCAGCATAACCTA+AGG	-	Chr1:11943706-11943725	None:intergenic	40.0%
	TGGAAACAACATGGCAATGA+TGG	-	Chr1:11944218-11944237	None:intergenic	40.0%
	TGTCCAAGATCAAACCTTAC+TGG	+	Chr1:11943304-11943323	MsG0180000842.01.T01:intron	40.0%
	TTGGACAAAGACCTAACCAT+AGG	-	Chr1:11944041-11944060	None:intergenic	40.0%
!	CTCTTCATCACTCTGTTTTC+TGG	-	Chr1:11943631-11943650	None:intergenic	40.0%
!	TCATCACTCTGTTTTCTGGA+GGG	-	Chr1:11943627-11943646	None:intergenic	40.0%
!	TTCATCACTCTGTTTTCTGG+AGG	-	Chr1:11943628-11943647	None:intergenic	40.0%
!	TTGGTTTCTATGAGCCCTTT+TGG	+	Chr1:11943757-11943776	MsG0180000842.01.T01:CDS	40.0%
!!	ACCCATATTTGGCTTTGTTG+AGG	+	Chr1:11944060-11944079	MsG0180000842.01.T01:CDS	40.0%
!!	CCCATATTTGGCTTTGTTGA+GGG	+	Chr1:11944061-11944080	MsG0180000842.01.T01:CDS	40.0%
!!	CTGGAGTTTTATCACTAGCA+TGG	+	Chr1:11941795-11941814	MsG0180000842.01.T01:CDS	40.0%
	AAACCTTACTGGGTCCCAAT+GGG	+	Chr1:11943315-11943334	MsG0180000842.01.T01:intron	45.0%
	AACAGAAACTGGGTCCCAAA+TGG	+	Chr1:11943352-11943371	MsG0180000842.01.T01:intron	45.0%
	ACAGAAACTGGGTCCCAAAT+GGG	+	Chr1:11943353-11943372	MsG0180000842.01.T01:intron	45.0%
	AGCATGGGCAATTGCACAAA+TGG	+	Chr1:11941811-11941830	MsG0180000842.01.T01:CDS	45.0%
	CAGCTGCTGGATCAATTCAA+GGG	+	Chr1:11944404-11944423	MsG0180000842.01.T01:CDS	45.0%
	CATGAACAGGATCAGGTGAA+CGG	-	Chr1:11941916-11941935	None:intergenic	45.0%
	CTCACAGCCAATCAATTGTG+AGG	-	Chr1:11942130-11942149	None:intergenic	45.0%
	GACCCAGTAAGGTTTGATCT+TGG	-	Chr1:11943310-11943329	None:intergenic	45.0%
	GATGTTCCTGCAACAGAAAC+TGG	+	Chr1:11943341-11943360	MsG0180000842.01.T01:intron	45.0%
	GCATGGGCAATTGCACAAAT+GGG	+	Chr1:11941812-11941831	MsG0180000842.01.T01:CDS	45.0%
	GCATTTGGAAATGATGCACC+AGG	+	Chr1:11943717-11943736	MsG0180000842.01.T01:CDS	45.0%
	GCCCTCAACAAAGCCAAATA+TGG	-	Chr1:11944065-11944084	None:intergenic	45.0%
	TCACTTAATTGGGGCATACC+AGG	+	Chr1:11943812-11943831	MsG0180000842.01.T01:CDS	45.0%
	TCAGCTGCTGGATCAATTCA+AGG	+	Chr1:11944403-11944422	MsG0180000842.01.T01:CDS	45.0%
	TGCAGTTATTGTGTAGCCGA+TGG	-	Chr1:11942609-11942628	None:intergenic	45.0%
	TGTGGAGATGTTCCAGCTAT+TGG	+	Chr1:11943399-11943418	MsG0180000842.01.T01:CDS	45.0%
!	ATAACGGCTGTGATTGGTTC+TGG	+	Chr1:11941776-11941795	MsG0180000842.01.T01:CDS	45.0%
!	GCACCAGGAAATTTTCTCAC+AGG	+	Chr1:11943732-11943751	MsG0180000842.01.T01:CDS	45.0%
!	GGCAATTGCACAAATGGGTT+GGG	+	Chr1:11941817-11941836	MsG0180000842.01.T01:CDS	45.0%
!	TAAGGTGCTCATTGAGATCC+AGG	+	Chr1:11943449-11943468	MsG0180000842.01.T01:CDS	45.0%
!	TTCTGGAGGGCTTGATTTCA+AGG	-	Chr1:11943614-11943633	None:intergenic	45.0%
!!	GTAGAGGTACTGCAACAGAA+AGG	+	Chr1:11943376-11943395	MsG0180000842.01.T01:CDS	45.0%
!!	ATAAATATTTAAATAAAGTA+AGG	-	Chr1:11943877-11943896	None:intergenic	5.0%
	AACCTTACTGGGTCCCAATG+GGG	+	Chr1:11943316-11943335	MsG0180000842.01.T01:intron	50.0%
	CAAACCTTACTGGGTCCCAA+TGG	+	Chr1:11943314-11943333	MsG0180000842.01.T01:intron	50.0%
	CAGAAACTGGGTCCCAAATG+GGG	+	Chr1:11943354-11943373	MsG0180000842.01.T01:intron	50.0%
	CGTTCACCTGATCCTGTTCA+TGG	+	Chr1:11941914-11941933	MsG0180000842.01.T01:CDS	50.0%
	CTCTTGCCATGAACAGGATC+AGG	-	Chr1:11941923-11941942	None:intergenic	50.0%
	GAGGTTGTCAGAGCTAACCT+AGG	+	Chr1:11941959-11941978	MsG0180000842.01.T01:intron	50.0%
	GCAGGAACATCTACCCCATT+GGG	-	Chr1:11943332-11943351	None:intergenic	50.0%
	GCAGTACCTCTACCCCATTT+GGG	-	Chr1:11943369-11943388	None:intergenic	50.0%
	GGGCAATTGCACAAATGGGT+TGG	+	Chr1:11941816-11941835	MsG0180000842.01.T01:CDS	50.0%
	GGTACTGCAACAGAAAGGTG+TGG	+	Chr1:11943381-11943400	MsG0180000842.01.T01:CDS	50.0%
	TGCAGGAACATCTACCCCAT+TGG	-	Chr1:11943333-11943352	None:intergenic	50.0%
	TGCAGTACCTCTACCCCATT+TGG	-	Chr1:11943370-11943389	None:intergenic	50.0%
	TACCCCATTGGGACCCAGTA+AGG	-	Chr1:11943321-11943340	None:intergenic	55.0%
	TGGGACCCAGTTTCTGTTGC+AGG	-	Chr1:11943350-11943369	None:intergenic	55.0%
!!	GCACAAATGGGTTGGGTTGC+TGG	+	Chr1:11941824-11941843	MsG0180000842.01.T01:CDS	55.0%
	CTGGGTCCCAAATGGGGTAG+AGG	+	Chr1:11943360-11943379	MsG0180000842.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	11941722	11944834	11941722	ID=MsG0180000842.01;Name=MsG0180000842.01
Chr1	mRNA	11941722	11944834	11941722	ID=MsG0180000842.01.T01;Parent=MsG0180000842.01;Name=MsG0180000842.01.T01;_AED=0.45;_eAED=0.45;_QI=0\|0.33\|0.25\|1\|1\|1\|4\|360\|336
Chr1	exon	11944049	11944834	11944049	ID=MsG0180000842.01.T01:exon:515;Parent=MsG0180000842.01.T01
Chr1	exon	11943607	11943833	11943607	ID=MsG0180000842.01.T01:exon:514;Parent=MsG0180000842.01.T01
Chr1	exon	11943357	11943474	11943357	ID=MsG0180000842.01.T01:exon:513;Parent=MsG0180000842.01.T01
Chr1	exon	11941722	11941961	11941722	ID=MsG0180000842.01.T01:exon:512;Parent=MsG0180000842.01.T01
Chr1	CDS	11941722	11941961	11941722	ID=MsG0180000842.01.T01:cds;Parent=MsG0180000842.01.T01
Chr1	CDS	11943357	11943474	11943357	ID=MsG0180000842.01.T01:cds;Parent=MsG0180000842.01.T01
Chr1	CDS	11943607	11943833	11943607	ID=MsG0180000842.01.T01:cds;Parent=MsG0180000842.01.T01
Chr1	CDS	11944049	11944474	11944049	ID=MsG0180000842.01.T01:cds;Parent=MsG0180000842.01.T01
Chr1	three_prime_UTR	11944475	11944834	11944475	ID=MsG0180000842.01.T01:three_prime_utr;Parent=MsG0180000842.01.T01

Gene Sequence

>MsG0180000842.01.T01

ATGGTTTTGATTTGTGAATTTGAAGGGACATGGTTGACTGCTAGTGCACATATTATAACGGCTGTGATTGGTTCTGGAGTTTTATCACTAGCATGGGCAATTGCACAAATGGGTTGGGTTGCTGGTCCTGCAGTTCTCTTTGCATTTTCTTTCATTACCTATTTCACTTCCACTCTTCTTGCTGATTGTTACCGTTCACCTGATCCTGTTCATGGCAAGAGAAACTACACTTACACTGAGAAACTGGGTCCCAAATGGGGTAGAGGTACTGCAACAGAAAGGTGTGGAGATGTTCCAGCTATTGGTGACATTGCATTTGCTTATGCTTTTTATAAGGTGCTCATTGAGATCCAGGCAAGATACCTTGAAATCAAGCCCTCCAGAAAACAGAGTGATGAAGAGAGCAAGTTTAATTGGAATTTTGACTACAACACATTTTATGTGCTATGTGGAACCTTAGGTTATGCTGCATTTGGAAATGATGCACCAGGAAATTTTCTCACAGGATTTGGTTTCTATGAGCCCTTTTGGCTAATAGACTTTGCCAATGTTTGCATTGCAGTTCACTTAATTGGGGCATACCAGGTCTTTGTCCAACCCATATTTGGCTTTGTTGAGGGCCAAAGTAAACAAAAATGGCCAGATAGCAAATTTGTGAATGGAGAGCATGCTATGAATATTCCACTATATGGAAGCTATAATGTGAATTACTTTAGAGTAATATGGAGGAGTTGTTATGTGATCATCACTGCCATCATTGCCATGTTGTTTCCATTCTTCAATGATTTCTTGGGACTAATTGGTTCACTATCCTTCTATCCATTAACCGTTTACTTCCCTATAGAAATGTACATTAAGAAAACCAACATGCCAAAATATTCATTCACATGGACTTGGCTCAAGATATTAAGTTGGCTATGTTTGATCATTTCTATTATCTCAGCTGCTGGATCAATTCAAGGGCTTGCAACATCACTCAAGACATACAAACCTTTCAGAGGAGAACAATGA

Protein sequence

>MsG0180000842.01.T01

MVLICEFEGTWLTASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLFAFSFITYFTSTLLADCYRSPDPVHGKRNYTYTEKLGPKWGRGTATERCGDVPAIGDIAFAYAFYKVLIEIQARYLEIKPSRKQSDEESKFNWNFDYNTFYVLCGTLGYAAFGNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLIGAYQVFVQPIFGFVEGQSKQKWPDSKFVNGEHAMNIPLYGSYNVNYFRVIWRSCYVIITAIIAMLFPFFNDFLGLIGSLSFYPLTVYFPIEMYIKKTNMPKYSFTWTWLKILSWLCLIISIISAAGSIQGLATSLKTYKPFRGEQ*