AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040532.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040532.01.T01 MTR_7g092260 91.134 485 11 1 36 488 1 485 0.0 897
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040532.01.T01 AT3G57610 75.354 495 75 5 36 488 1 490 0.0 734

Find 168 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTGTTGTTCATCATAAT+TGG 0.205412 7:-78843652 MsG0780040532.01.T01:three_prime_UTR
GCCCTTCATCTTGTTCCTTC+TGG 0.207149 7:-78845382 MsG0780040532.01.T01:CDS
ACAAGTGATAAGTGAGAATT+AGG 0.223950 7:+78843426 None:intergenic
ATTCCCACCAACCTTTGATT+TGG 0.277042 7:-78843727 MsG0780040532.01.T01:three_prime_UTR
TTTCCCCTCAGCATTATAAA+TGG 0.286547 7:+78845411 None:intergenic
AGCCAAGTCTCCGGGGTTCT+AGG 0.303357 7:-78846419 MsG0780040532.01.T01:CDS
GAGGGTACACTGTGTGTTAT+TGG 0.321082 7:-78845349 MsG0780040532.01.T01:CDS
AGATTTGCTGGGCAGGAGTT+TGG 0.325288 7:-78844413 MsG0780040532.01.T01:CDS
CTCTCAGACCATCCACTGTT+TGG 0.325666 7:+78845203 None:intergenic
AGAATCGGCGGCGGCGAGTT+TGG 0.326910 7:+78846466 None:intergenic
ACTTCTTCCCTGAGCATGTC+TGG 0.334463 7:+78844999 None:intergenic
CACACAGTGTACCCTCATTA+AGG 0.344550 7:+78845356 None:intergenic
GTGGAATATGAATCACTTCC+TGG 0.346422 7:-78843960 MsG0780040532.01.T01:CDS
TTCCCACCAACCTTTGATTT+GGG 0.348380 7:-78843726 MsG0780040532.01.T01:three_prime_UTR
GGTGATCTCCTCAGATTTGC+TGG 0.355406 7:-78844425 MsG0780040532.01.T01:CDS
CCGGGGTTCTAGGTTGTCAA+TGG 0.355465 7:-78846409 MsG0780040532.01.T01:CDS
CGAAATCGTTGCTCGTTGTC+AGG 0.355855 7:-78846339 MsG0780040532.01.T01:intron
GTGCATATCCCGCCTGCTGA+TGG 0.367072 7:+78844810 None:intergenic
ATCATTGAATCTCACTAAGT+TGG 0.370084 7:-78844309 MsG0780040532.01.T01:CDS
TTGGTCGGAGGTGGCGCAGC+TGG 0.370290 7:+78846485 None:intergenic
GTCACTATAGGCAAGTTTAG+AGG 0.379226 7:-78843769 MsG0780040532.01.T01:three_prime_UTR
CTATCCTTTCCACATACAAC+TGG 0.385187 7:+78843883 None:intergenic
ATTGATAACTTGGAGTCAAA+TGG 0.386204 7:-78845286 MsG0780040532.01.T01:CDS
CACTACATTGGTGTTGGGCC+TGG 0.389141 7:-78843837 MsG0780040532.01.T01:CDS
GGTGCCATCAGCATGTTTAT+AGG 0.396396 7:+78844247 None:intergenic
CCAACACCAATGTAGTGAAT+AGG 0.399958 7:+78843843 None:intergenic
AGAGTAGTTGGTGATTTAGT+TGG 0.401424 7:-78844768 MsG0780040532.01.T01:CDS
GAGCTTTCTAAATCTTTCAT+TGG 0.401932 7:-78845175 MsG0780040532.01.T01:CDS
ACAAACTTCCATGTCACTAT+AGG 0.407033 7:-78843781 MsG0780040532.01.T01:three_prime_UTR
TTGATAACTTGGAGTCAAAT+GGG 0.407945 7:-78845285 MsG0780040532.01.T01:CDS
GTTTCAAGAAATTGATAACT+TGG 0.408899 7:-78845296 MsG0780040532.01.T01:CDS
CGGGGTTCTAGGTTGTCAAT+GGG 0.417074 7:-78846408 MsG0780040532.01.T01:CDS
CAGGAGTTTGGCACGACTAC+TGG 0.422698 7:-78844401 MsG0780040532.01.T01:CDS
CTATTCACTACATTGGTGTT+GGG 0.424268 7:-78843842 MsG0780040532.01.T01:CDS
TCAATGGGGTGATGAGGGTA+AGG 0.425045 7:-78846393 MsG0780040532.01.T01:CDS
TTTGGTGGAAATCAAACAAT+AGG 0.425260 7:+78845221 None:intergenic
TGATCTTGATGAAATACAAT+TGG 0.427996 7:-78844276 MsG0780040532.01.T01:CDS
CCGTCTTCTCGAGCAATTGA+AGG 0.428684 7:-78844198 MsG0780040532.01.T01:intron
CGTTTCGAGGGTAGCGATTG+TGG 0.433103 7:+78846528 None:intergenic
TTTCAGGGTGGAGCTAATGC+TGG 0.434088 7:-78845439 MsG0780040532.01.T01:intron
ACATACAACTGGGCAGCTCT+TGG 0.435019 7:+78843894 None:intergenic
CCCAAAATTTCAGTTGGAAA+AGG 0.438815 7:+78844455 None:intergenic
CCTATTCACTACATTGGTGT+TGG 0.439872 7:-78843843 MsG0780040532.01.T01:CDS
TCCTTCTGGTATCCTTAATG+AGG 0.443845 7:-78845368 MsG0780040532.01.T01:CDS
ACTAAATCACCAACTACTCT+TGG 0.445333 7:+78844771 None:intergenic
GGCGGGATATGCACTGGTCT+TGG 0.445759 7:-78844801 MsG0780040532.01.T01:CDS
GGAGATCTGATGGGAATGAT+TGG 0.447314 7:+78844219 None:intergenic
AGTATGGTCCAGACATGCTC+AGG 0.447790 7:-78845007 MsG0780040532.01.T01:CDS
CAACACCAATGTAGTGAATA+GGG 0.458058 7:+78843844 None:intergenic
ACCATGTTGGACATTGACTT+TGG 0.460715 7:-78844861 MsG0780040532.01.T01:CDS
AGTCGCTTAGCCAAGTCTCC+GGG 0.462990 7:-78846427 MsG0780040532.01.T01:CDS
TTCAGGGTGGAGCTAATGCT+GGG 0.465190 7:-78845438 MsG0780040532.01.T01:intron
ATGCACAGTATCGGCAATGT+AGG 0.467790 7:+78844941 None:intergenic
TACACTACAAGAGTTGGTTC+TGG 0.469853 7:-78844479 MsG0780040532.01.T01:CDS
TGCATATCCCGCCTGCTGAT+GGG 0.475354 7:+78844811 None:intergenic
AACCTAGAACCCCGGAGACT+TGG 0.477081 7:+78846417 None:intergenic
CTGATGGGAATGATTGGACT+GGG 0.477727 7:+78844225 None:intergenic
GATCTGACATGAGTAACTTA+AGG 0.481019 7:+78844343 None:intergenic
AGGGTACACTGTGTGTTATT+GGG 0.481130 7:-78845348 MsG0780040532.01.T01:CDS
TCTCCTCAGATTTGCTGGGC+AGG 0.484718 7:-78844420 MsG0780040532.01.T01:CDS
GGTATTGCTCCAAGAGTAGT+TGG 0.485649 7:-78844780 MsG0780040532.01.T01:CDS
GCGGCGAGTTTGGTCGGAGG+TGG 0.485998 7:+78846476 None:intergenic
CAAGAGATATGCTGAAAGGT+TGG 0.489232 7:-78844967 MsG0780040532.01.T01:CDS
AGCACGGTCCAATGCCCTCT+TGG 0.490867 7:+78845147 None:intergenic
AAGAAGAAGGTCTTGGTTGA+AGG 0.493853 7:-78844894 MsG0780040532.01.T01:CDS
CACACAAAAGAAGAAGGTCT+TGG 0.496341 7:-78844901 MsG0780040532.01.T01:CDS
GAATGTGGGCAAAGCCTAGT+TGG 0.496936 7:-78846706 MsG0780040532.01.T01:CDS
ATAGTAAAATTGATTGAATG+TGG 0.498567 7:-78846721 None:intergenic
TCGAGAAGACGGAGATCTGA+TGG 0.501733 7:+78844209 None:intergenic
TCAGACCATCCACTGTTTGG+TGG 0.501896 7:+78845206 None:intergenic
AGTTGGTGATTTAGTTGGAG+TGG 0.507836 7:-78844763 MsG0780040532.01.T01:intron
TCGGCGGCGGCGAGTTTGGT+CGG 0.509841 7:+78846470 None:intergenic
GAGTCGCTTAGCCAAGTCTC+CGG 0.514857 7:-78846428 MsG0780040532.01.T01:CDS
CCTTCAATTGCTCGAGAAGA+CGG 0.514957 7:+78844198 None:intergenic
GCACAAACGACGACGTTTCG+AGG 0.517397 7:+78846515 None:intergenic
TGGTGTTGTAGTACACCTGC+CGG 0.517814 7:-78845323 MsG0780040532.01.T01:CDS
GAAATGTCGGTCTTCCATCC+AGG 0.520020 7:+78843942 None:intergenic
GATTCGACGGAGGGAAGAAT+CGG 0.521212 7:+78846451 None:intergenic
GTCAAATGGGGTCTCTTGCA+AGG 0.521688 7:-78845272 MsG0780040532.01.T01:CDS
GGTGTTGTAGTACACCTGCC+GGG 0.523431 7:-78845322 MsG0780040532.01.T01:CDS
CCTGGACCCAAAATTTCAGT+TGG 0.524206 7:+78844449 None:intergenic
ACGGTCCAATGCCCTCTTGG+TGG 0.527156 7:+78845150 None:intergenic
GTGATCTCCTCAGATTTGCT+GGG 0.527693 7:-78844424 MsG0780040532.01.T01:CDS
TCCTCGACGATGTGGTTGGT+TGG 0.527979 7:-78844375 MsG0780040532.01.T01:CDS
TACCAGAAGGAACAAGATGA+AGG 0.530175 7:+78845380 None:intergenic
AAGATCAGAATAGTTTCTGA+TGG 0.531605 7:+78843917 None:intergenic
AGGTGGCGCAGCTGGCTTAG+CGG 0.532092 7:+78846493 None:intergenic
TTTCTTGAAACAGCCCCGGC+AGG 0.537912 7:+78845308 None:intergenic
GATTTCCACCAAACAGTGGA+TGG 0.538700 7:-78845211 MsG0780040532.01.T01:CDS
TCTGATGGGAATGATTGGAC+TGG 0.539682 7:+78844224 None:intergenic
TACTAGAAACTCAAAACCTC+AGG 0.544569 7:+78843491 None:intergenic
ATCCCAAATCAAAGGTTGGT+GGG 0.544673 7:+78843724 None:intergenic
GTGCTTTCATCCCAAATCAA+AGG 0.545518 7:+78843716 None:intergenic
TAGTAAAATTGATTGAATGT+GGG 0.546781 7:-78846720 None:intergenic
ACACTGTGTGTTATTGGGAA+TGG 0.547526 7:-78845343 MsG0780040532.01.T01:CDS
CCTTCTGGTATCCTTAATGA+GGG 0.547813 7:-78845367 MsG0780040532.01.T01:CDS
AAAGCTTACACTACAAGAGT+TGG 0.549657 7:-78844485 MsG0780040532.01.T01:CDS
GGTGGAAATCAAACAATAGG+TGG 0.551067 7:+78845224 None:intergenic
ACTTCTTCTAGCCCATCAGC+AGG 0.551578 7:-78844822 MsG0780040532.01.T01:CDS
TGGCACCACCAAGAGGGCAT+TGG 0.553714 7:-78845155 MsG0780040532.01.T01:CDS
CTTCTAGCCCATCAGCAGGC+GGG 0.555299 7:-78844818 MsG0780040532.01.T01:CDS
GATCTTGATGAAATACAATT+GGG 0.555626 7:-78844275 MsG0780040532.01.T01:CDS
GGGCTAGAAGAAGTAACAAA+GGG 0.561208 7:+78844831 None:intergenic
AAGAGCTGCCCAGTTGTATG+TGG 0.561924 7:-78843892 MsG0780040532.01.T01:CDS
ATTCATGACATGCACAGTAT+CGG 0.562602 7:+78844932 None:intergenic
AGGTTGTCAATGGGGTGATG+AGG 0.563598 7:-78846399 MsG0780040532.01.T01:CDS
AATATGAGAGCATCACGTCC+AGG 0.566807 7:+78843819 None:intergenic
AGCTATCACACAAAAGAAGA+AGG 0.568095 7:-78844907 MsG0780040532.01.T01:CDS
GTTTCTGATGGAAGAAATGT+CGG 0.570249 7:+78843929 None:intergenic
AATCTGAGGAGATCACCTCC+TGG 0.570594 7:+78844431 None:intergenic
GGTTGTCAATGGGGTGATGA+GGG 0.575592 7:-78846398 MsG0780040532.01.T01:CDS
TGTTATCAGATGCAGCATTG+AGG 0.579564 7:-78845043 MsG0780040532.01.T01:intron
TCAGCAGGCGGGATATGCAC+TGG 0.579997 7:-78844807 MsG0780040532.01.T01:CDS
ACCAACCACATCGTCGAGGA+CGG 0.583254 7:+78844378 None:intergenic
TGCACAGTATCGGCAATGTA+GGG 0.584495 7:+78844942 None:intergenic
GTAGCGATTGTGGAAAGAGA+AGG 0.587672 7:+78846538 None:intergenic
AGTTACTCATGTCAGATCAA+CGG 0.588325 7:-78844338 MsG0780040532.01.T01:CDS
CAATGGGGTGATGAGGGTAA+GGG 0.589367 7:-78846392 MsG0780040532.01.T01:CDS
CACAAACGACGACGTTTCGA+GGG 0.589416 7:+78846516 None:intergenic
CATCCCAAATCAAAGGTTGG+TGG 0.590841 7:+78843723 None:intergenic
CATACCATTTATAATGCTGA+GGG 0.592622 7:-78845415 MsG0780040532.01.T01:CDS
TTTCATCCCAAATCAAAGGT+TGG 0.592775 7:+78843720 None:intergenic
CGAGAAGACGGAGATCTGAT+GGG 0.595396 7:+78844210 None:intergenic
AAGCGACTCGATTCGACGGA+GGG 0.596961 7:+78846442 None:intergenic
TGGAAAGAGAAGGGTCGTTG+AGG 0.597534 7:+78846548 None:intergenic
CTGCCCAGTTGTATGTGGAA+AGG 0.598126 7:-78843887 MsG0780040532.01.T01:CDS
CCATTGACAACCTAGAACCC+CGG 0.601532 7:+78846409 None:intergenic
GCATACCATTTATAATGCTG+AGG 0.603108 7:-78845416 MsG0780040532.01.T01:CDS
AATATGAATCACTTCCTGGA+TGG 0.605089 7:-78843956 MsG0780040532.01.T01:CDS
AATACAAGAGATATGCTGAA+AGG 0.605813 7:-78844971 MsG0780040532.01.T01:CDS
GGTGTCCCTATTCACTACAT+TGG 0.608292 7:-78843849 MsG0780040532.01.T01:CDS
TCTTCTAGCCCATCAGCAGG+CGG 0.609438 7:-78844819 MsG0780040532.01.T01:CDS
GGCTAAGCGACTCGATTCGA+CGG 0.612042 7:+78846438 None:intergenic
ATGGGGTCTCTTGCAAGGGA+AGG 0.612791 7:-78845267 MsG0780040532.01.T01:CDS
TTGTACTTGTAACGATCCTG+AGG 0.613533 7:-78843507 MsG0780040532.01.T01:three_prime_UTR
ACTCCTGCCCAGCAAATCTG+AGG 0.614249 7:+78844417 None:intergenic
TCAATTTCTTGAAACAGCCC+CGG 0.614330 7:+78845304 None:intergenic
GTCTCCTATAAACATGCTGA+TGG 0.614825 7:-78844251 MsG0780040532.01.T01:CDS
TGGGCTAGAAGAAGTAACAA+AGG 0.617357 7:+78844830 None:intergenic
GTGGAAATCAAACAATAGGT+GGG 0.619076 7:+78845225 None:intergenic
ACGGAGGGAAGAATCGGCGG+CGG 0.619759 7:+78846457 None:intergenic
GCCAAAGTCAATGTCCAACA+TGG 0.620337 7:+78844860 None:intergenic
TCAAATGGGGTCTCTTGCAA+GGG 0.621459 7:-78845271 MsG0780040532.01.T01:CDS
AAGAAGGTCTTGGTTGAAGG+AGG 0.621961 7:-78844891 MsG0780040532.01.T01:CDS
TAGCGATTGTGGAAAGAGAA+GGG 0.622185 7:+78846539 None:intergenic
ACCAGAAGGAACAAGATGAA+GGG 0.627898 7:+78845381 None:intergenic
GCCGTCCTCGACGATGTGGT+TGG 0.629116 7:-78844379 MsG0780040532.01.T01:CDS
GCGGCGGCGAGTTTGGTCGG+AGG 0.635253 7:+78846473 None:intergenic
TTTCATTGGCACCACCAAGA+GGG 0.638803 7:-78845161 MsG0780040532.01.T01:CDS
TCGACGGAGGGAAGAATCGG+CGG 0.639520 7:+78846454 None:intergenic
TGATAACTTGGAGTCAAATG+GGG 0.640868 7:-78845284 MsG0780040532.01.T01:CDS
AGGAGGACAAGCAACCATGT+TGG 0.641818 7:-78844874 MsG0780040532.01.T01:CDS
GTTTGATTTCCACCAAACAG+TGG 0.646528 7:-78845215 MsG0780040532.01.T01:CDS
TAAACTTGCCTATAGTGACA+TGG 0.650944 7:+78843773 None:intergenic
ACTGGCCGTCCTCGACGATG+TGG 0.654350 7:-78844383 MsG0780040532.01.T01:CDS
CATTTCTAGTGACTATAGCG+AGG 0.657710 7:-78843694 MsG0780040532.01.T01:three_prime_UTR
GGGGTTCTAGGTTGTCAATG+GGG 0.657783 7:-78846407 MsG0780040532.01.T01:CDS
TATCCTTTCCACATACAACT+GGG 0.657807 7:+78843884 None:intergenic
CCCTCATTAAGGATACCAGA+AGG 0.669245 7:+78845367 None:intergenic
TAAGCGACTCGATTCGACGG+AGG 0.670720 7:+78846441 None:intergenic
CTTTCATTGGCACCACCAAG+AGG 0.676048 7:-78845162 MsG0780040532.01.T01:CDS
GTCGCTTAGCCAAGTCTCCG+GGG 0.679961 7:-78846426 MsG0780040532.01.T01:CDS
GTATGGTCCAGACATGCTCA+GGG 0.681201 7:-78845006 MsG0780040532.01.T01:CDS
TCCAACCAACCACATCGTCG+AGG 0.700960 7:+78844374 None:intergenic
TGATGGGAATGATTGGACTG+GGG 0.710759 7:+78844226 None:intergenic
GAAAGGATAGAAGAACTCGT+CGG 0.711892 7:-78843870 MsG0780040532.01.T01:CDS
GTGTTGTAGTACACCTGCCG+GGG 0.742752 7:-78845321 MsG0780040532.01.T01:CDS
ATACCATTTATAATGCTGAG+GGG 0.757113 7:-78845414 MsG0780040532.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAAGTTTATCTAAAT+TGG - Chr7:78844470-78844489 MsG0780040532.01.T01:CDS 10.0%
!!! AGTAATTTTTTTGGAATAAT+TGG - Chr7:78844044-78844063 MsG0780040532.01.T01:intron 15.0%
!!! ATAATTGTAGTTTTCTTTTA+GGG - Chr7:78843921-78843940 MsG0780040532.01.T01:CDS 15.0%
!!! GTAATTTTTTTGGAATAATT+GGG - Chr7:78844045-78844064 MsG0780040532.01.T01:intron 15.0%
!! ATTGTTTACATTATCTATGT+TGG + Chr7:78845554-78845573 None:intergenic 20.0%
!! TACTGATATATAAACAGAAA+AGG - Chr7:78846018-78846037 MsG0780040532.01.T01:intron 20.0%
!! TTGTTTACATTATCTATGTT+GGG + Chr7:78845553-78845572 None:intergenic 20.0%
!!! AAATGCATGAGTAATTTTTT+TGG - Chr7:78844035-78844054 MsG0780040532.01.T01:intron 20.0%
!!! AATGGTTCATGAATTTATTT+TGG - Chr7:78845601-78845620 MsG0780040532.01.T01:intron 20.0%
!!! ATTTGTGATGAAATTTTTTC+AGG - Chr7:78844665-78844684 MsG0780040532.01.T01:intron 20.0%
!!! GATAATTGTAGTTTTCTTTT+AGG - Chr7:78843920-78843939 MsG0780040532.01.T01:CDS 20.0%
!!! TTACTATATTTTGCAAGATT+TGG - Chr7:78844553-78844572 MsG0780040532.01.T01:intron 20.0%
!!! TTTGTGATGAAATTTTTTCA+GGG - Chr7:78844666-78844685 MsG0780040532.01.T01:intron 20.0%
! ATACTATCTATACTGTTTGT+TGG - Chr7:78845387-78845406 MsG0780040532.01.T01:CDS 25.0%
! ATTCTGTTGTTCATCATAAT+TGG - Chr7:78846468-78846487 MsG0780040532.01.T01:CDS 25.0%
! GATCTTGATGAAATACAATT+GGG - Chr7:78845845-78845864 MsG0780040532.01.T01:intron 25.0%
! GTGCAAAATAACATGAATAA+AGG + Chr7:78844640-78844659 None:intergenic 25.0%
! TAAGCAGATTTAATTAACAC+TGG - Chr7:78845575-78845594 MsG0780040532.01.T01:intron 25.0%
! TATTTGCATGTACTTTCTAA+TGG - Chr7:78846116-78846135 MsG0780040532.01.T01:intron 25.0%
! TCATCAAAAATTACACATCA+TGG - Chr7:78846652-78846671 MsG0780040532.01.T01:CDS 25.0%
! TGATCTTGATGAAATACAAT+TGG - Chr7:78845844-78845863 MsG0780040532.01.T01:intron 25.0%
! TGTTTACATTATCTATGTTG+GGG + Chr7:78845552-78845571 None:intergenic 25.0%
! TTTGATATGATTCAAATCGT+GGG - Chr7:78843863-78843882 MsG0780040532.01.T01:CDS 25.0%
!! GTTTCAAGAAATTGATAACT+TGG - Chr7:78844824-78844843 MsG0780040532.01.T01:CDS 25.0%
!! TTAATTTTGCAGTACTTGTT+GGG - Chr7:78846503-78846522 MsG0780040532.01.T01:CDS 25.0%
!! TTTTGATATGATTCAAATCG+TGG - Chr7:78843862-78843881 MsG0780040532.01.T01:CDS 25.0%
!!! AGGTTCAAAGATTTTAAGTA+TGG - Chr7:78845097-78845116 MsG0780040532.01.T01:intron 25.0%
!!! TTGAAATTTACTTTTAGCTC+AGG - Chr7:78845507-78845526 MsG0780040532.01.T01:intron 25.0%
AAGATCAGAATAGTTTCTGA+TGG + Chr7:78846206-78846225 None:intergenic 30.0%
AATACAAGAGATATGCTGAA+AGG - Chr7:78845149-78845168 MsG0780040532.01.T01:intron 30.0%
ACAAGTGATAAGTGAGAATT+AGG + Chr7:78846697-78846716 None:intergenic 30.0%
ACAATAACTTATGAGATGCA+AGG + Chr7:78845479-78845498 None:intergenic 30.0%
ATACCATTTATAATGCTGAG+GGG - Chr7:78844706-78844725 MsG0780040532.01.T01:intron 30.0%
ATCAATGACTTGAATGAAAG+TGG + Chr7:78845971-78845990 None:intergenic 30.0%
ATCATTGAATCTCACTAAGT+TGG - Chr7:78845811-78845830 MsG0780040532.01.T01:intron 30.0%
CATACCATTTATAATGCTGA+GGG - Chr7:78844705-78844724 MsG0780040532.01.T01:intron 30.0%
CTAACTAAACCTTACAAAAC+CGG + Chr7:78844345-78844364 None:intergenic 30.0%
GAGCTTTCTAAATCTTTCAT+TGG - Chr7:78844945-78844964 MsG0780040532.01.T01:CDS 30.0%
GTTTACATTATCTATGTTGG+GGG + Chr7:78845551-78845570 None:intergenic 30.0%
GTTTCATAAGATTCTACAAG+TGG + Chr7:78844105-78844124 None:intergenic 30.0%
TGATGTACTTGATTACTGTA+AGG - Chr7:78844518-78844537 MsG0780040532.01.T01:intron 30.0%
TGCTTGATACATTATTTGCT+CGG - Chr7:78843997-78844016 MsG0780040532.01.T01:intron 30.0%
TGTACTTTCTAATGGTTGTA+TGG - Chr7:78846124-78846143 MsG0780040532.01.T01:intron 30.0%
TTCAATGAAACTGTGAAATG+AGG - Chr7:78843898-78843917 MsG0780040532.01.T01:CDS 30.0%
TTTAATTAACACTGGCAGAA+TGG - Chr7:78845583-78845602 MsG0780040532.01.T01:intron 30.0%
TTTACATTATCTATGTTGGG+GGG + Chr7:78845550-78845569 None:intergenic 30.0%
TTTGGTGGAAATCAAACAAT+AGG + Chr7:78844902-78844921 None:intergenic 30.0%
! ATTGATAACTTGGAGTCAAA+TGG - Chr7:78844834-78844853 MsG0780040532.01.T01:CDS 30.0%
! CCTTTTCCAACTGAAATTTT+GGG - Chr7:78845665-78845684 MsG0780040532.01.T01:intron 30.0%
! CTTAATTTTGCAGTACTTGT+TGG - Chr7:78846502-78846521 MsG0780040532.01.T01:CDS 30.0%
! CTTTTTGCTTTGTGATTGAA+TGG - Chr7:78843958-78843977 MsG0780040532.01.T01:CDS 30.0%
! TCCTTTTCCAACTGAAATTT+TGG - Chr7:78845664-78845683 MsG0780040532.01.T01:intron 30.0%
! TTGATAACTTGGAGTCAAAT+GGG - Chr7:78844835-78844854 MsG0780040532.01.T01:CDS 30.0%
!! AATTCTAAACCGGTTTTGTA+AGG - Chr7:78844333-78844352 MsG0780040532.01.T01:CDS 30.0%
!! TAAATTGGCTCTAAGTAGTT+GGG - Chr7:78844485-78844504 MsG0780040532.01.T01:CDS 30.0%
!!! GTTGTATGGTTTTGTGTTTT+AGG - Chr7:78846138-78846157 MsG0780040532.01.T01:intron 30.0%
!!! TGAATTTATTTTGGATGTGC+AGG - Chr7:78845610-78845629 MsG0780040532.01.T01:intron 30.0%
AAACGAACTTGAGAGAAAAG+GGG + Chr7:78843822-78843841 None:intergenic 35.0%
AAAGCTTACACTACAAGAGT+TGG - Chr7:78845635-78845654 MsG0780040532.01.T01:intron 35.0%
AACAAAAGATCAAGCTTCTG+AGG + Chr7:78845061-78845080 None:intergenic 35.0%
AATATGAATCACTTCCTGGA+TGG - Chr7:78846164-78846183 MsG0780040532.01.T01:intron 35.0%
AATGACTTGAATGAAAGTGG+TGG + Chr7:78845968-78845987 None:intergenic 35.0%
ACAAACTTCCATGTCACTAT+AGG - Chr7:78846339-78846358 MsG0780040532.01.T01:intron 35.0%
ACTAAATCACCAACTACTCT+TGG + Chr7:78845352-78845371 None:intergenic 35.0%
AGAAACGAACTTGAGAGAAA+AGG + Chr7:78843824-78843843 None:intergenic 35.0%
AGCTATCACACAAAAGAAGA+AGG - Chr7:78845213-78845232 MsG0780040532.01.T01:CDS 35.0%
AGTCTACATTGGAAGAGATA+AGG - Chr7:78844130-78844149 MsG0780040532.01.T01:intron 35.0%
AGTTACTCATGTCAGATCAA+CGG - Chr7:78845782-78845801 MsG0780040532.01.T01:intron 35.0%
ATTCATGACATGCACAGTAT+CGG + Chr7:78845191-78845210 None:intergenic 35.0%
CAACACCAATGTAGTGAATA+GGG + Chr7:78846279-78846298 None:intergenic 35.0%
CAATTGGAGTTACAATCAGA+TGG - Chr7:78844237-78844256 MsG0780040532.01.T01:CDS 35.0%
CATCTGATTGTAACTCCAAT+TGG + Chr7:78844239-78844258 None:intergenic 35.0%
CCCAAAATTTCAGTTGGAAA+AGG + Chr7:78845668-78845687 None:intergenic 35.0%
CTCGTAGATCAATTCTAAAC+CGG - Chr7:78844323-78844342 MsG0780040532.01.T01:CDS 35.0%
GAAACGAACTTGAGAGAAAA+GGG + Chr7:78843823-78843842 None:intergenic 35.0%
GATCTGACATGAGTAACTTA+AGG + Chr7:78845780-78845799 None:intergenic 35.0%
GCATACCATTTATAATGCTG+AGG - Chr7:78844704-78844723 MsG0780040532.01.T01:intron 35.0%
GTGGAAATCAAACAATAGGT+GGG + Chr7:78844898-78844917 None:intergenic 35.0%
GTTTCTGATGGAAGAAATGT+CGG + Chr7:78846194-78846213 None:intergenic 35.0%
TAAACTTGCCTATAGTGACA+TGG + Chr7:78846350-78846369 None:intergenic 35.0%
TAAAGGAGCTAATAATGCCA+AGG + Chr7:78844623-78844642 None:intergenic 35.0%
TACTAGAAACTCAAAACCTC+AGG + Chr7:78846632-78846651 None:intergenic 35.0%
TATCCTTTCCACATACAACT+GGG + Chr7:78846239-78846258 None:intergenic 35.0%
TGAAACTGTTGAGTCTACAT+TGG - Chr7:78844119-78844138 MsG0780040532.01.T01:intron 35.0%
TGATAACTTGGAGTCAAATG+GGG - Chr7:78844836-78844855 MsG0780040532.01.T01:CDS 35.0%
TGTACTTGATTACTGTAAGG+TGG - Chr7:78844521-78844540 MsG0780040532.01.T01:intron 35.0%
TTTCATCCCAAATCAAAGGT+TGG + Chr7:78846403-78846422 None:intergenic 35.0%
TTTCCCCTCAGCATTATAAA+TGG + Chr7:78844712-78844731 None:intergenic 35.0%
! CTATTCACTACATTGGTGTT+GGG - Chr7:78846278-78846297 MsG0780040532.01.T01:intron 35.0%
! GGCTTTTGAGCAAAATTAAG+GGG - Chr7:78844300-78844319 MsG0780040532.01.T01:CDS 35.0%
! GGGCTTTTGAGCAAAATTAA+GGG - Chr7:78844299-78844318 MsG0780040532.01.T01:CDS 35.0%
! TTGAATGAAAGTGGTGGAAA+GGG + Chr7:78845962-78845981 None:intergenic 35.0%
! TTGCAAGATTTGGCTTCATT+TGG - Chr7:78844563-78844582 MsG0780040532.01.T01:intron 35.0%
!! AACTGTCAAACTGGTTTGTA+AGG + Chr7:78844177-78844196 None:intergenic 35.0%
!! AGAGTAGTTGGTGATTTAGT+TGG - Chr7:78845352-78845371 MsG0780040532.01.T01:CDS 35.0%
!! CTAAATTGGCTCTAAGTAGT+TGG - Chr7:78844484-78844503 MsG0780040532.01.T01:CDS 35.0%
!!! AACTCCAATTGGCTTTTTCA+GGG + Chr7:78844228-78844247 None:intergenic 35.0%
!!! GTATGGTTTTGTGTTTTAGG+TGG - Chr7:78846141-78846160 MsG0780040532.01.T01:intron 35.0%
!!! GTGATGAAATTTTTTCAGGG+TGG - Chr7:78844669-78844688 MsG0780040532.01.T01:intron 35.0%
!!! TAACTCCAATTGGCTTTTTC+AGG + Chr7:78844229-78844248 None:intergenic 35.0%
AACGAACTTGAGAGAAAAGG+GGG + Chr7:78843821-78843840 None:intergenic 40.0%
AAGAAGAAGGTCTTGGTTGA+AGG - Chr7:78845226-78845245 MsG0780040532.01.T01:CDS 40.0%
AAGAGATAAGGCATGAGTAG+AGG - Chr7:78844142-78844161 MsG0780040532.01.T01:intron 40.0%
ACCAGAAGGAACAAGATGAA+GGG + Chr7:78844742-78844761 None:intergenic 40.0%
AGACGCACGCTCAAAAAAAA+GGG + Chr7:78843461-78843480 None:intergenic 40.0%
AGCTAATAATGCCAAGGAAG+AGG + Chr7:78844617-78844636 None:intergenic 40.0%
ATCGGATCATGACTCACAAT+CGG + Chr7:78844271-78844290 None:intergenic 40.0%
ATGATTCAAATCGTGGGTCA+TGG - Chr7:78843869-78843888 MsG0780040532.01.T01:CDS 40.0%
ATTCCCACCAACCTTTGATT+TGG - Chr7:78846393-78846412 MsG0780040532.01.T01:CDS 40.0%
CAAGAGATATGCTGAAAGGT+TGG - Chr7:78845153-78845172 MsG0780040532.01.T01:CDS 40.0%
CACACAAAAGAAGAAGGTCT+TGG - Chr7:78845219-78845238 MsG0780040532.01.T01:CDS 40.0%
CACCAACTCTAATCCCATTA+CGG + Chr7:78845015-78845034 None:intergenic 40.0%
CACGCTCAAAAAAAAGGGTT+GGG + Chr7:78843456-78843475 None:intergenic 40.0%
CCAACACCAATGTAGTGAAT+AGG + Chr7:78846280-78846299 None:intergenic 40.0%
CCTATTCACTACATTGGTGT+TGG - Chr7:78846277-78846296 MsG0780040532.01.T01:intron 40.0%
CCTTCTGGTATCCTTAATGA+GGG - Chr7:78844753-78844772 MsG0780040532.01.T01:intron 40.0%
CTATCCTTTCCACATACAAC+TGG + Chr7:78846240-78846259 None:intergenic 40.0%
GAAAGGATAGAAGAACTCGT+CGG - Chr7:78846250-78846269 MsG0780040532.01.T01:intron 40.0%
GCTAATAATGCCAAGGAAGA+GGG + Chr7:78844616-78844635 None:intergenic 40.0%
GGGCTAGAAGAAGTAACAAA+GGG + Chr7:78845292-78845311 None:intergenic 40.0%
GGTGGAAATCAAACAATAGG+TGG + Chr7:78844899-78844918 None:intergenic 40.0%
GTCACTATAGGCAAGTTTAG+AGG - Chr7:78846351-78846370 MsG0780040532.01.T01:CDS 40.0%
GTCTCCTATAAACATGCTGA+TGG - Chr7:78845869-78845888 MsG0780040532.01.T01:intron 40.0%
GTGCTTTCATCCCAAATCAA+AGG + Chr7:78846407-78846426 None:intergenic 40.0%
GTGGAATATGAATCACTTCC+TGG - Chr7:78846160-78846179 MsG0780040532.01.T01:intron 40.0%
TACCAGAAGGAACAAGATGA+AGG + Chr7:78844743-78844762 None:intergenic 40.0%
TAGACGCACGCTCAAAAAAA+AGG + Chr7:78843462-78843481 None:intergenic 40.0%
TAGCGATTGTGGAAAGAGAA+GGG + Chr7:78843584-78843603 None:intergenic 40.0%
TCAATTTCTTGAAACAGCCC+CGG + Chr7:78844819-78844838 None:intergenic 40.0%
TCCTTCTGGTATCCTTAATG+AGG - Chr7:78844752-78844771 MsG0780040532.01.T01:intron 40.0%
TGTTATCAGATGCAGCATTG+AGG - Chr7:78845077-78845096 MsG0780040532.01.T01:intron 40.0%
TTATCTATGTTGGGGGGAAA+AGG + Chr7:78845544-78845563 None:intergenic 40.0%
TTCCACTGTGATGAGTGTTT+AGG - Chr7:78844073-78844092 MsG0780040532.01.T01:intron 40.0%
TTGTACTTGTAACGATCCTG+AGG - Chr7:78846613-78846632 MsG0780040532.01.T01:CDS 40.0%
! AACCGTAATGGGATTAGAGT+TGG - Chr7:78845010-78845029 MsG0780040532.01.T01:CDS 40.0%
! ACACTGTGTGTTATTGGGAA+TGG - Chr7:78844777-78844796 MsG0780040532.01.T01:CDS 40.0%
! AGGGTACACTGTGTGTTATT+GGG - Chr7:78844772-78844791 MsG0780040532.01.T01:CDS 40.0%
! ATACTGTTTGTTGGAGTCGT+TGG - Chr7:78845396-78845415 MsG0780040532.01.T01:CDS 40.0%
! ATCCCAAATCAAAGGTTGGT+GGG + Chr7:78846399-78846418 None:intergenic 40.0%
! CTTGAATGAAAGTGGTGGAA+AGG + Chr7:78845963-78845982 None:intergenic 40.0%
! GGGGCTTTTGAGCAAAATTA+AGG - Chr7:78844298-78844317 MsG0780040532.01.T01:CDS 40.0%
! GTTTGATTTCCACCAAACAG+TGG - Chr7:78844905-78844924 MsG0780040532.01.T01:CDS 40.0%
! TACACTACAAGAGTTGGTTC+TGG - Chr7:78845641-78845660 MsG0780040532.01.T01:intron 40.0%
! TGGGCTAGAAGAAGTAACAA+AGG + Chr7:78845293-78845312 None:intergenic 40.0%
! TTCCCACCAACCTTTGATTT+GGG - Chr7:78846394-78846413 MsG0780040532.01.T01:CDS 40.0%
!! ACCATGTTGGACATTGACTT+TGG - Chr7:78845259-78845278 MsG0780040532.01.T01:CDS 40.0%
!! AGTTGGTGATTTAGTTGGAG+TGG - Chr7:78845357-78845376 MsG0780040532.01.T01:CDS 40.0%
!! AGTTGGTGATTTGCGTTACA+TGG - Chr7:78845027-78845046 MsG0780040532.01.T01:CDS 40.0%
!! ATTTTGCAGTACTTGTTGGG+AGG - Chr7:78846506-78846525 MsG0780040532.01.T01:CDS 40.0%
!! CATTTCTAGTGACTATAGCG+AGG - Chr7:78846426-78846445 MsG0780040532.01.T01:CDS 40.0%
!! CTTGTGCTTGTTTTCCAACT+AGG + Chr7:78843431-78843450 None:intergenic 40.0%
!! GAGATGCAAGGCTTTTTCTT+AGG + Chr7:78845467-78845486 None:intergenic 40.0%
!! GATTTGGCTTCATTTGGTGT+TGG - Chr7:78844569-78844588 MsG0780040532.01.T01:intron 40.0%
!! TCAAACTGGTTTGTAAGGTG+AGG + Chr7:78844172-78844191 None:intergenic 40.0%
!!! ACTCCAATTGGCTTTTTCAG+GGG + Chr7:78844227-78844246 None:intergenic 40.0%
AAGAAGGTCTTGGTTGAAGG+AGG - Chr7:78845229-78845248 MsG0780040532.01.T01:CDS 45.0%
AATAATGCCAAGGAAGAGGG+TGG + Chr7:78844613-78844632 None:intergenic 45.0%
AGTCATGATCCGATGAATCG+AGG - Chr7:78844277-78844296 MsG0780040532.01.T01:CDS 45.0%
ATAATGCCAAGGAAGAGGGT+GGG + Chr7:78844612-78844631 None:intergenic 45.0%
CAACCCCTGAAAAAGCCAAT+TGG - Chr7:78844221-78844240 MsG0780040532.01.T01:CDS 45.0%
CACACAGTGTACCCTCATTA+AGG + Chr7:78844767-78844786 None:intergenic 45.0%
CATCCCAAATCAAAGGTTGG+TGG + Chr7:78846400-78846419 None:intergenic 45.0%
CCAGCAAAGCTAACCGTAAT+GGG - Chr7:78844999-78845018 MsG0780040532.01.T01:CDS 45.0%
CCCTCATTAAGGATACCAGA+AGG + Chr7:78844756-78844775 None:intergenic 45.0%
CCTGGACCCAAAATTTCAGT+TGG + Chr7:78845674-78845693 None:intergenic 45.0%
CCTTCAATTGCTCGAGAAGA+CGG + Chr7:78845925-78845944 None:intergenic 45.0%
CCTTCATTAGAGCTTGGGTA+GGG + Chr7:78844369-78844388 None:intergenic 45.0%
CTGATGGGAATGATTGGACT+GGG + Chr7:78845898-78845917 None:intergenic 45.0%
GACCTAAACACTCATCACAG+TGG + Chr7:78844078-78844097 None:intergenic 45.0%
GAGCTCCTTCATTAGAGCTT+GGG + Chr7:78844374-78844393 None:intergenic 45.0%
GATTTCCACCAAACAGTGGA+TGG - Chr7:78844909-78844928 MsG0780040532.01.T01:CDS 45.0%
GCACGCTCAAAAAAAAGGGT+TGG + Chr7:78843457-78843476 None:intergenic 45.0%
GCATAGAGCAACTGTCAAAC+TGG + Chr7:78844186-78844205 None:intergenic 45.0%
GCCAAAGTCAATGTCCAACA+TGG + Chr7:78845263-78845282 None:intergenic 45.0%
GGAGATCTGATGGGAATGAT+TGG + Chr7:78845904-78845923 None:intergenic 45.0%
GGTATTGCTCCAAGAGTAGT+TGG - Chr7:78845340-78845359 MsG0780040532.01.T01:CDS 45.0%
GGTGTCCCTATTCACTACAT+TGG - Chr7:78846271-78846290 MsG0780040532.01.T01:intron 45.0%
GTAGCGATTGTGGAAAGAGA+AGG + Chr7:78843585-78843604 None:intergenic 45.0%
GTCATGATCCGATGAATCGA+GGG - Chr7:78844278-78844297 MsG0780040532.01.T01:CDS 45.0%
TCAAAAGCCCCTCGATTCAT+CGG + Chr7:78844289-78844308 None:intergenic 45.0%
TCAAATGGGGTCTCTTGCAA+GGG - Chr7:78844849-78844868 MsG0780040532.01.T01:CDS 45.0%
TCATGATCCGATGAATCGAG+GGG - Chr7:78844279-78844298 MsG0780040532.01.T01:CDS 45.0%
TCCAGCAAAGCTAACCGTAA+TGG - Chr7:78844998-78845017 MsG0780040532.01.T01:CDS 45.0%
TCCTTCATTAGAGCTTGGGT+AGG + Chr7:78844370-78844389 None:intergenic 45.0%
TCTGATGGGAATGATTGGAC+TGG + Chr7:78845899-78845918 None:intergenic 45.0%
TGAGCTCCTTCATTAGAGCT+TGG + Chr7:78844375-78844394 None:intergenic 45.0%
TGATGGGAATGATTGGACTG+GGG + Chr7:78845897-78845916 None:intergenic 45.0%
TTTCATTGGCACCACCAAGA+GGG - Chr7:78844959-78844978 MsG0780040532.01.T01:CDS 45.0%
! AGCTCTAATGAAGGAGCTCA+AGG - Chr7:78844375-78844394 MsG0780040532.01.T01:CDS 45.0%
! GAAGGAGCTCAAGGTACTAA+AGG - Chr7:78844384-78844403 MsG0780040532.01.T01:CDS 45.0%
! GAGGGTACACTGTGTGTTAT+TGG - Chr7:78844771-78844790 MsG0780040532.01.T01:CDS 45.0%
! GGTGCCATCAGCATGTTTAT+AGG + Chr7:78845876-78845895 None:intergenic 45.0%
! GTGATCTCCTCAGATTTGCT+GGG - Chr7:78845696-78845715 MsG0780040532.01.T01:intron 45.0%
!! AATATGAGAGCATCACGTCC+AGG + Chr7:78846304-78846323 None:intergenic 45.0%
!! ACTGAAATTTTGGGTCCAGG+AGG - Chr7:78845674-78845693 MsG0780040532.01.T01:intron 45.0%
!! ATGCACAGTATCGGCAATGT+AGG + Chr7:78845182-78845201 None:intergenic 45.0%
!! ATTGGCTCTAAGTAGTTGGG+AGG - Chr7:78844488-78844507 MsG0780040532.01.T01:CDS 45.0%
!! CCAACTGAAATTTTGGGTCC+AGG - Chr7:78845671-78845690 MsG0780040532.01.T01:intron 45.0%
!! TGCACAGTATCGGCAATGTA+GGG + Chr7:78845181-78845200 None:intergenic 45.0%
!! TTAGCTTTGCTGGAGTAGCA+CGG + Chr7:78844992-78845011 None:intergenic 45.0%
!! TTGGCTCTAAGTAGTTGGGA+GGG - Chr7:78844489-78844508 MsG0780040532.01.T01:CDS 45.0%
AAGAGCTGCCCAGTTGTATG+TGG - Chr7:78846228-78846247 MsG0780040532.01.T01:intron 50.0%
AATCTGAGGAGATCACCTCC+TGG + Chr7:78845692-78845711 None:intergenic 50.0%
ACATACAACTGGGCAGCTCT+TGG + Chr7:78846229-78846248 None:intergenic 50.0%
ACTTCTTCCCTGAGCATGTC+TGG + Chr7:78845124-78845143 None:intergenic 50.0%
ACTTCTTCTAGCCCATCAGC+AGG - Chr7:78845298-78845317 MsG0780040532.01.T01:CDS 50.0%
AGGAGGACAAGCAACCATGT+TGG - Chr7:78845246-78845265 MsG0780040532.01.T01:CDS 50.0%
AGGTTGTCAATGGGGTGATG+AGG - Chr7:78843721-78843740 MsG0780040532.01.T01:three_prime_UTR 50.0%
AGTATGGTCCAGACATGCTC+AGG - Chr7:78845113-78845132 MsG0780040532.01.T01:intron 50.0%
CAATGGGGTGATGAGGGTAA+GGG - Chr7:78843728-78843747 MsG0780040532.01.T01:three_prime_UTR 50.0%
CACAAACGACGACGTTTCGA+GGG + Chr7:78843607-78843626 None:intergenic 50.0%
CCATTGACAACCTAGAACCC+CGG + Chr7:78843714-78843733 None:intergenic 50.0%
CCGTCTTCTCGAGCAATTGA+AGG - Chr7:78845922-78845941 MsG0780040532.01.T01:intron 50.0%
CGAAATCGTTGCTCGTTGTC+AGG - Chr7:78843781-78843800 MsG0780040532.01.T01:three_prime_UTR 50.0%
CGAGAAGACGGAGATCTGAT+GGG + Chr7:78845913-78845932 None:intergenic 50.0%
CTCTCAGACCATCCACTGTT+TGG + Chr7:78844920-78844939 None:intergenic 50.0%
CTGCCCAGTTGTATGTGGAA+AGG - Chr7:78846233-78846252 MsG0780040532.01.T01:intron 50.0%
CTTTCATTGGCACCACCAAG+AGG - Chr7:78844958-78844977 MsG0780040532.01.T01:CDS 50.0%
GAAATGTCGGTCTTCCATCC+AGG + Chr7:78846181-78846200 None:intergenic 50.0%
GAATGTGGGCAAAGCCTAGT+TGG - Chr7:78843414-78843433 MsG0780040532.01.T01:three_prime_UTR 50.0%
GATTCGACGGAGGGAAGAAT+CGG + Chr7:78843672-78843691 None:intergenic 50.0%
GCCCTTCATCTTGTTCCTTC+TGG - Chr7:78844738-78844757 MsG0780040532.01.T01:intron 50.0%
GGTGATCTCCTCAGATTTGC+TGG - Chr7:78845695-78845714 MsG0780040532.01.T01:intron 50.0%
GGTTGTCAATGGGGTGATGA+GGG - Chr7:78843722-78843741 MsG0780040532.01.T01:three_prime_UTR 50.0%
GTATGGTCCAGACATGCTCA+GGG - Chr7:78845114-78845133 MsG0780040532.01.T01:intron 50.0%
GTCAAATGGGGTCTCTTGCA+AGG - Chr7:78844848-78844867 MsG0780040532.01.T01:CDS 50.0%
TCAATGGGGTGATGAGGGTA+AGG - Chr7:78843727-78843746 MsG0780040532.01.T01:three_prime_UTR 50.0%
TCAGACCATCCACTGTTTGG+TGG + Chr7:78844917-78844936 None:intergenic 50.0%
TCAGGGGTTGAGCAATCCAA+GGG + Chr7:78844211-78844230 None:intergenic 50.0%
TCGAGAAGACGGAGATCTGA+TGG + Chr7:78845914-78845933 None:intergenic 50.0%
TGGAAAGAGAAGGGTCGTTG+AGG + Chr7:78843575-78843594 None:intergenic 50.0%
TTCAGGGGTTGAGCAATCCA+AGG + Chr7:78844212-78844231 None:intergenic 50.0%
TTCAGGGTGGAGCTAATGCT+GGG - Chr7:78844682-78844701 MsG0780040532.01.T01:intron 50.0%
TTTAGTCCCACCCTCTTCCT+TGG - Chr7:78844603-78844622 MsG0780040532.01.T01:intron 50.0%
TTTCAGGGTGGAGCTAATGC+TGG - Chr7:78844681-78844700 MsG0780040532.01.T01:intron 50.0%
! CCCTACCCAAGCTCTAATGA+AGG - Chr7:78844366-78844385 MsG0780040532.01.T01:CDS 50.0%
!! AGATTTGCTGGGCAGGAGTT+TGG - Chr7:78845707-78845726 MsG0780040532.01.T01:intron 50.0%
!! CCCATTACGGTTAGCTTTGC+TGG + Chr7:78845002-78845021 None:intergenic 50.0%
!! CGGGGTTCTAGGTTGTCAAT+GGG - Chr7:78843712-78843731 MsG0780040532.01.T01:three_prime_UTR 50.0%
!! GGGGTTCTAGGTTGTCAATG+GGG - Chr7:78843713-78843732 MsG0780040532.01.T01:three_prime_UTR 50.0%
!! TGGTGTTGTAGTACACCTGC+CGG - Chr7:78844797-78844816 MsG0780040532.01.T01:CDS 50.0%
AACCTAGAACCCCGGAGACT+TGG + Chr7:78843706-78843725 None:intergenic 55.0%
ACCAACCACATCGTCGAGGA+CGG + Chr7:78845745-78845764 None:intergenic 55.0%
ACTCCTGCCCAGCAAATCTG+AGG + Chr7:78845706-78845725 None:intergenic 55.0%
AGTCGCTTAGCCAAGTCTCC+GGG - Chr7:78843693-78843712 MsG0780040532.01.T01:three_prime_UTR 55.0%
ATGGGGTCTCTTGCAAGGGA+AGG - Chr7:78844853-78844872 MsG0780040532.01.T01:CDS 55.0%
CAGGAGTTTGGCACGACTAC+TGG - Chr7:78845719-78845738 MsG0780040532.01.T01:intron 55.0%
CAGGGGTTGAGCAATCCAAG+GGG + Chr7:78844210-78844229 None:intergenic 55.0%
CGTTTCGAGGGTAGCGATTG+TGG + Chr7:78843595-78843614 None:intergenic 55.0%
GAGTCGCTTAGCCAAGTCTC+CGG - Chr7:78843692-78843711 MsG0780040532.01.T01:three_prime_UTR 55.0%
GCACAAACGACGACGTTTCG+AGG + Chr7:78843608-78843627 None:intergenic 55.0%
GTGTTGTAGTACACCTGCCG+GGG - Chr7:78844799-78844818 MsG0780040532.01.T01:CDS 55.0%
TCCAACCAACCACATCGTCG+AGG + Chr7:78845749-78845768 None:intergenic 55.0%
TCCTCGACGATGTGGTTGGT+TGG - Chr7:78845745-78845764 MsG0780040532.01.T01:intron 55.0%
TCTTCTAGCCCATCAGCAGG+CGG - Chr7:78845301-78845320 MsG0780040532.01.T01:CDS 55.0%
TGCATATCCCGCCTGCTGAT+GGG + Chr7:78845312-78845331 None:intergenic 55.0%
TTTCTTGAAACAGCCCCGGC+AGG + Chr7:78844815-78844834 None:intergenic 55.0%
! AAGCGACTCGATTCGACGGA+GGG + Chr7:78843681-78843700 None:intergenic 55.0%
! GGCTAAGCGACTCGATTCGA+CGG + Chr7:78843685-78843704 None:intergenic 55.0%
! GGTGTTGTAGTACACCTGCC+GGG - Chr7:78844798-78844817 MsG0780040532.01.T01:CDS 55.0%
! TAAGCGACTCGATTCGACGG+AGG + Chr7:78843682-78843701 None:intergenic 55.0%
!! CACTACATTGGTGTTGGGCC+TGG - Chr7:78846283-78846302 MsG0780040532.01.T01:intron 55.0%
!! CCGGGGTTCTAGGTTGTCAA+TGG - Chr7:78843711-78843730 MsG0780040532.01.T01:three_prime_UTR 55.0%
!! TCTCCTCAGATTTGCTGGGC+AGG - Chr7:78845700-78845719 MsG0780040532.01.T01:intron 55.0%
ACGGTCCAATGCCCTCTTGG+TGG + Chr7:78844973-78844992 None:intergenic 60.0%
AGCACGGTCCAATGCCCTCT+TGG + Chr7:78844976-78844995 None:intergenic 60.0%
AGCCAAGTCTCCGGGGTTCT+AGG - Chr7:78843701-78843720 MsG0780040532.01.T01:three_prime_UTR 60.0%
CAGTTGCTCTATGCGCCCCT+TGG - Chr7:78844192-78844211 MsG0780040532.01.T01:intron 60.0%
CTTCTAGCCCATCAGCAGGC+GGG - Chr7:78845302-78845321 MsG0780040532.01.T01:CDS 60.0%
GTCGCTTAGCCAAGTCTCCG+GGG - Chr7:78843694-78843713 MsG0780040532.01.T01:three_prime_UTR 60.0%
GTGCATATCCCGCCTGCTGA+TGG + Chr7:78845313-78845332 None:intergenic 60.0%
TCAGCAGGCGGGATATGCAC+TGG - Chr7:78845313-78845332 MsG0780040532.01.T01:CDS 60.0%
TCGACGGAGGGAAGAATCGG+CGG + Chr7:78843669-78843688 None:intergenic 60.0%
! GGCGGGATATGCACTGGTCT+TGG - Chr7:78845319-78845338 MsG0780040532.01.T01:CDS 60.0%
! TGGCACCACCAAGAGGGCAT+TGG - Chr7:78844965-78844984 MsG0780040532.01.T01:CDS 60.0%
ACGGAGGGAAGAATCGGCGG+CGG + Chr7:78843666-78843685 None:intergenic 65.0%
ACTGGCCGTCCTCGACGATG+TGG - Chr7:78845737-78845756 MsG0780040532.01.T01:intron 65.0%
AGAATCGGCGGCGGCGAGTT+TGG + Chr7:78843657-78843676 None:intergenic 65.0%
GCCGTCCTCGACGATGTGGT+TGG - Chr7:78845741-78845760 MsG0780040532.01.T01:intron 65.0%
! AGGTGGCGCAGCTGGCTTAG+CGG + Chr7:78843630-78843649 None:intergenic 65.0%
GCGGCGAGTTTGGTCGGAGG+TGG + Chr7:78843647-78843666 None:intergenic 70.0%
TCGGCGGCGGCGAGTTTGGT+CGG + Chr7:78843653-78843672 None:intergenic 70.0%
TTGGTCGGAGGTGGCGCAGC+TGG + Chr7:78843638-78843657 None:intergenic 70.0%
GCGGCGGCGAGTTTGGTCGG+AGG + Chr7:78843650-78843669 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 78843414 78846728 78843414 ID=MsG0780040532.01;Name=MsG0780040532.01
Chr7 mRNA 78843414 78846728 78843414 ID=MsG0780040532.01.T01;Parent=MsG0780040532.01;Name=MsG0780040532.01.T01;_AED=0.47;_eAED=0.47;_QI=2|0.75|0.6|1|1|1|5|398|488
Chr7 exon 78843414 78843982 78843414 ID=MsG0780040532.01.T01:exon:16166;Parent=MsG0780040532.01.T01
Chr7 exon 78844199 78844510 78844199 ID=MsG0780040532.01.T01:exon:16165;Parent=MsG0780040532.01.T01
Chr7 exon 78844764 78845056 78844764 ID=MsG0780040532.01.T01:exon:16164;Parent=MsG0780040532.01.T01
Chr7 exon 78845152 78845455 78845152 ID=MsG0780040532.01.T01:exon:16163;Parent=MsG0780040532.01.T01
Chr7 exon 78846340 78846728 78846340 ID=MsG0780040532.01.T01:exon:16162;Parent=MsG0780040532.01.T01
Chr7 five_prime_UTR 78846727 78846728 78846727 ID=MsG0780040532.01.T01:five_prime_utr;Parent=MsG0780040532.01.T01
Chr7 CDS 78846340 78846726 78846340 ID=MsG0780040532.01.T01:cds;Parent=MsG0780040532.01.T01
Chr7 CDS 78845152 78845455 78845152 ID=MsG0780040532.01.T01:cds;Parent=MsG0780040532.01.T01
Chr7 CDS 78844764 78845056 78844764 ID=MsG0780040532.01.T01:cds;Parent=MsG0780040532.01.T01
Chr7 CDS 78844199 78844510 78844199 ID=MsG0780040532.01.T01:cds;Parent=MsG0780040532.01.T01
Chr7 CDS 78843812 78843982 78843812 ID=MsG0780040532.01.T01:cds;Parent=MsG0780040532.01.T01
Chr7 three_prime_UTR 78843414 78843811 78843414 ID=MsG0780040532.01.T01:three_prime_utr;Parent=MsG0780040532.01.T01
Gene Sequence

>MsG0780040532.01.T01

ATGTGGGCAAAGCCTAGTTGGAAAACAAGCACAAGCACCCAACCCTTTTTTTTGAGCGTGCGTCTATTCAACGCTGCTTCACTTCACTGTCTTGCACTTGCTGCGATGAGTATCTCATCGCTGCGTCTCGATTCTCACGCAATATGCACTCATCAACCTCAACGACCCTTCTCTTTCCACAATCGCTACCCTCGAAACGTCGTCGTTTGTGCCGCTAAGCCAGCTGCGCCACCTCCGACCAAACTCGCCGCCGCCGATTCTTCCCTCCGTCGAATCGAGTCGCTTAGCCAAGTCTCCGGGGTTCTAGGTTGTCAATGGGGTGATGAGGGTAAGGGAAAACTTGTTGATATCTTAGCTCAACACTTCGAAATCGTTGCTCGTTGTCAGGGTGGAGCTAATGCTGGGCATACCATTTATAATGCTGAGGGGAAAAAGTTTGCCCTTCATCTTGTTCCTTCTGGTATCCTTAATGAGGGTACACTGTGTGTTATTGGGAATGGTGTTGTAGTACACCTGCCGGGGCTGTTTCAAGAAATTGATAACTTGGAGTCAAATGGGGTCTCTTGCAAGGGAAGGATATTGATATCTGATAGAGCCCACCTATTGTTTGATTTCCACCAAACAGTGGATGGTCTGAGAGAAGCTGAGCTTTCTAAATCTTTCATTGGCACCACCAAGAGGGCATTGGACCATGCAGCATTGAGGTTCAAAGATTTTAAGTATGGTCCAGACATGCTCAGGGAAGAAGTTGAGAAATACAAGAGATATGCTGAAAGGTTGGAACCCTACATTGCCGATACTGTGCATGTCATGAATGAAGCTATCACACAAAAGAAGAAGGTCTTGGTTGAAGGAGGACAAGCAACCATGTTGGACATTGACTTTGGCACTTATCCCTTTGTTACTTCTTCTAGCCCATCAGCAGGCGGGATATGCACTGGTCTTGGTATTGCTCCAAGAGTAGTTGGTGATTTAGTTGGAGTGGTGAAAGCTTACACTACAAGAGTTGGTTCTGGTCCTTTTCCAACTGAAATTTTGGGTCCAGGAGGTGATCTCCTCAGATTTGCTGGGCAGGAGTTTGGCACGACTACTGGCCGTCCTCGACGATGTGGTTGGTTGGATATAGTTGCCTTAAGTTACTCATGTCAGATCAACGGTTTTTCATCATTGAATCTCACTAAGTTGGATGTTTTGTCTGATCTTGATGAAATACAATTGGGTGTCTCCTATAAACATGCTGATGGCACCCCAGTCCAATCATTCCCATCAGATCTCCGTCTTCTCGAGCAATTGAAGGTGGAATATGAATCACTTCCTGGATGGAAGACCGACATTTCTTCCATCAGAAACTATTCTGATCTTCCAAGAGCTGCCCAGTTGTATGTGGAAAGGATAGAAGAACTCGTCGGTGTCCCTATTCACTACATTGGTGTTGGGCCTGGACGTGATGCTCTCATATTCAAATAA
Protein sequence

>MsG0780040532.01.T01

MWAKPSWKTSTSTQPFFLSVRLFNAASLHCLALAAMSISSLRLDSHAICTHQPQRPFSFHNRYPRNVVVCAAKPAAPPPTKLAAADSSLRRIESLSQVSGVLGCQWGDEGKGKLVDILAQHFEIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEGTLCVIGNGVVVHLPGLFQEIDNLESNGVSCKGRILISDRAHLLFDFHQTVDGLREAELSKSFIGTTKRALDHAALRFKDFKYGPDMLREEVEKYKRYAERLEPYIADTVHVMNEAITQKKKVLVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLVGVVKAYTTRVGSGPFPTEILGPGGDLLRFAGQEFGTTTGRPRRCGWLDIVALSYSCQINGFSSLNLTKLDVLSDLDEIQLGVSYKHADGTPVQSFPSDLRLLEQLKVEYESLPGWKTDISSIRNYSDLPRAAQLYVERIEELVGVPIHYIGVGPGRDALIFK*