Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041674.01.T01 | XP_024625412.1 | 81.609 | 348 | 14 | 3 | 1 | 307 | 27 | 365 | 0 | 544 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041674.01.T01 | Q8RXU4 | 61.947 | 339 | 79 | 4 | 1 | 298 | 20 | 349 | 1.13E-143 | 411 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041674.01.T01 | A0A072U4C8 | 81.609 | 348 | 14 | 3 | 1 | 307 | 20 | 358 | 0.0 | 544 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0780041674.01 | 0.819980 | 8.732642e-53 | 6.822802e-50 |
| MsG0080048874.01 | MsG0780041674.01 | 0.817929 | 2.555751e-52 | 1.886495e-49 |
| MsG0180000065.01 | MsG0780041674.01 | 0.803016 | 4.263309e-49 | 2.119200e-46 |
| MsG0180000470.01 | MsG0780041674.01 | 0.820696 | 5.982986e-53 | 4.767948e-50 |
| MsG0180002952.01 | MsG0780041674.01 | 0.801783 | 7.651656e-49 | 3.686066e-46 |
| MsG0180003669.01 | MsG0780041674.01 | 0.828014 | 1.137271e-54 | 1.116607e-51 |
| MsG0180004114.01 | MsG0780041674.01 | 0.812250 | 4.660784e-51 | 2.948522e-48 |
| MsG0180004157.01 | MsG0780041674.01 | 0.822987 | 1.765202e-53 | 1.500719e-50 |
| MsG0180004264.01 | MsG0780041674.01 | 0.815512 | 8.901526e-52 | 6.149832e-49 |
| MsG0180004426.01 | MsG0780041674.01 | 0.809171 | 2.158908e-50 | 1.258595e-47 |
| MsG0180006257.01 | MsG0780041674.01 | 0.837579 | 4.782880e-57 | 6.240084e-54 |
| MsG0280006299.01 | MsG0780041674.01 | 0.861782 | 8.054241e-64 | 2.305122e-60 |
| MsG0780040604.01 | MsG0780041674.01 | 0.821421 | 4.073384e-53 | 3.312470e-50 |
| MsG0780040704.01 | MsG0780041674.01 | 0.840250 | 9.735107e-58 | 1.378713e-54 |
| MsG0780041167.01 | MsG0780041674.01 | 0.812671 | 3.770916e-51 | 2.412345e-48 |
| MsG0780041402.01 | MsG0780041674.01 | 0.807162 | 5.783236e-50 | 3.198128e-47 |
| MsG0780041456.01 | MsG0780041674.01 | 0.808256 | 3.386163e-50 | 1.926999e-47 |
| MsG0780041485.01 | MsG0780041674.01 | 0.801382 | 9.244378e-49 | 4.408541e-46 |
| MsG0780041674.01 | MsG0880042158.01 | 0.835866 | 1.307240e-56 | 1.619223e-53 |
| MsG0780041674.01 | MsG0880042232.01 | 0.835051 | 2.101010e-56 | 2.539483e-53 |
| MsG0780041674.01 | MsG0880042294.01 | 0.815375 | 9.548112e-52 | 6.571471e-49 |
| MsG0780041674.01 | MsG0880042966.01 | 0.802332 | 5.898321e-49 | 2.881651e-46 |
| MsG0780041674.01 | MsG0880044574.01 | 0.830180 | 3.395638e-55 | 3.551125e-52 |
| MsG0780041674.01 | MsG0880045372.01 | 0.809254 | 2.072445e-50 | 1.210848e-47 |
| MsG0780041674.01 | MsG0880045691.01 | 0.836537 | 8.828023e-57 | 1.115788e-53 |
| MsG0780041674.01 | MsG0880045736.01 | 0.808540 | 2.946185e-50 | 1.689026e-47 |
| MsG0780041674.01 | MsG0880045895.01 | 0.800824 | 1.202078e-48 | 5.652203e-46 |
| MsG0780041674.01 | MsG0880045937.01 | 0.822661 | 2.102616e-53 | 1.771122e-50 |
| MsG0780041674.01 | MsG0880046531.01 | 0.840603 | 7.872688e-58 | 1.127103e-54 |
| MsG0780041674.01 | MsG0880047712.01 | 0.859499 | 3.966292e-63 | 1.049667e-59 |
| MsG0280010614.01 | MsG0780041674.01 | 0.809265 | 2.060881e-50 | 1.204451e-47 |
| MsG0280010698.01 | MsG0780041674.01 | 0.828619 | 8.128389e-55 | 8.121967e-52 |
| MsG0280011032.01 | MsG0780041674.01 | 0.802176 | 6.352544e-49 | 3.091038e-46 |
| MsG0280011282.01 | MsG0780041674.01 | 0.825511 | 4.505493e-54 | 4.114987e-51 |
| MsG0380011494.01 | MsG0780041674.01 | 0.818896 | 1.542831e-52 | 1.169660e-49 |
| MsG0380013178.01 | MsG0780041674.01 | 0.828748 | 7.567403e-55 | 7.589076e-52 |
| MsG0380013834.01 | MsG0780041674.01 | 0.801294 | 9.636731e-49 | 4.585543e-46 |
| MsG0380014173.01 | MsG0780041674.01 | 0.813722 | 2.216215e-51 | 1.458517e-48 |
| MsG0380014573.01 | MsG0780041674.01 | 0.854878 | 9.180546e-62 | 2.080382e-58 |
| MsG0680031506.01 | MsG0780041674.01 | 0.814436 | 1.541861e-51 | 1.034556e-48 |
| MsG0680035346.01 | MsG0780041674.01 | 0.809661 | 1.694232e-50 | 1.000709e-47 |
| MsG0480018586.01 | MsG0780041674.01 | 0.804359 | 2.243093e-49 | 1.154222e-46 |
| MsG0480019329.01 | MsG0780041674.01 | 0.805765 | 1.139755e-49 | 6.081084e-47 |
| MsG0480020471.01 | MsG0780041674.01 | 0.804171 | 2.455761e-49 | 1.257512e-46 |
| MsG0480020836.01 | MsG0780041674.01 | 0.834137 | 3.566590e-56 | 4.194032e-53 |
| MsG0480020886.01 | MsG0780041674.01 | 0.838928 | 2.148679e-57 | 2.921171e-54 |
| MsG0480020909.01 | MsG0780041674.01 | 0.808521 | 2.973672e-50 | 1.703971e-47 |
| MsG0480021465.01 | MsG0780041674.01 | 0.800836 | 1.195787e-48 | 5.624391e-46 |
| MsG0480021536.01 | MsG0780041674.01 | 0.807558 | 4.766125e-50 | 2.662866e-47 |
| MsG0480022164.01 | MsG0780041674.01 | 0.806979 | 6.322388e-50 | 3.479706e-47 |
| MsG0480023163.01 | MsG0780041674.01 | 0.806460 | 8.139665e-50 | 4.420581e-47 |
| MsG0480023707.01 | MsG0780041674.01 | 0.832398 | 9.673524e-56 | 1.079949e-52 |
| MsG0580024038.01 | MsG0780041674.01 | 0.800814 | 1.207884e-48 | 5.677936e-46 |
| MsG0580024918.01 | MsG0780041674.01 | 0.801009 | 1.101836e-48 | 5.205758e-46 |
| MsG0580025022.01 | MsG0780041674.01 | 0.814552 | 1.454074e-51 | 9.786999e-49 |
| MsG0580025758.01 | MsG0780041674.01 | 0.815822 | 7.592627e-52 | 5.290001e-49 |
| MsG0580026002.01 | MsG0780041674.01 | 0.833099 | 6.478905e-56 | 7.386384e-53 |
| MsG0380015566.01 | MsG0780041674.01 | 0.836099 | 1.141064e-56 | 1.423456e-53 |
| MsG0380015720.01 | MsG0780041674.01 | 0.852546 | 4.299384e-61 | 9.014294e-58 |
| MsG0380015808.01 | MsG0780041674.01 | 0.803603 | 3.222600e-49 | 1.626339e-46 |
| MsG0380016140.01 | MsG0780041674.01 | 0.806274 | 8.907891e-50 | 4.814953e-47 |
| MsG0380016475.01 | MsG0780041674.01 | 0.801093 | 1.059522e-48 | 5.016353e-46 |
| MsG0380016517.01 | MsG0780041674.01 | 0.811538 | 6.657971e-51 | 4.132302e-48 |
| MsG0380016581.01 | MsG0780041674.01 | 0.812009 | 5.258438e-51 | 3.304830e-48 |
| MsG0380016603.01 | MsG0780041674.01 | 0.804892 | 1.736521e-49 | 9.060193e-47 |
| MsG0380016910.01 | MsG0780041674.01 | 0.848031 | 7.939501e-60 | 1.437816e-56 |
| MsG0380017060.01 | MsG0780041674.01 | 0.800655 | 1.301693e-48 | 6.094575e-46 |
| MsG0380017323.01 | MsG0780041674.01 | 0.801456 | 8.926302e-49 | 4.264779e-46 |
| MsG0380017680.01 | MsG0780041674.01 | 0.804191 | 2.432159e-49 | 1.246040e-46 |
| MsG0480018128.01 | MsG0780041674.01 | 0.822161 | 2.747256e-53 | 2.281212e-50 |
| MsG0480018163.01 | MsG0780041674.01 | 0.847913 | 8.559385e-60 | 1.544537e-56 |
| MsG0580027031.01 | MsG0780041674.01 | 0.826663 | 2.397191e-54 | 2.262629e-51 |
| MsG0580027228.01 | MsG0780041674.01 | 0.803279 | 3.760023e-49 | 1.881764e-46 |
| MsG0680030656.01 | MsG0780041674.01 | 0.817452 | 3.273276e-52 | 2.384827e-49 |
| MsG0280007494.01 | MsG0780041674.01 | 0.804388 | 2.212135e-49 | 1.139109e-46 |
| MsG0280008073.01 | MsG0780041674.01 | 0.804445 | 2.152780e-49 | 1.110164e-46 |
| MsG0280008384.01 | MsG0780041674.01 | 0.810936 | 8.993692e-51 | 5.494323e-48 |
| MsG0280008615.01 | MsG0780041674.01 | 0.819509 | 1.118669e-52 | 8.625894e-50 |
| MsG0280009024.01 | MsG0780041674.01 | 0.839678 | 1.372113e-57 | 1.908773e-54 |
| MsG0280009514.01 | MsG0780041674.01 | 0.830141 | 3.471485e-55 | 3.626240e-52 |
| MsG0280010443.01 | MsG0780041674.01 | 0.800198 | 1.613034e-48 | 7.464864e-46 |
| MsG0680035692.01 | MsG0780041674.01 | 0.830050 | 3.653536e-55 | 3.806113e-52 |
| MsG0680035694.01 | MsG0780041674.01 | 0.800169 | 1.634786e-48 | 7.560065e-46 |
| MsG0780037918.01 | MsG0780041674.01 | 0.814627 | 1.399477e-51 | 9.438370e-49 |
| MsG0780037942.01 | MsG0780041674.01 | 0.815308 | 9.881101e-52 | 6.788150e-49 |
| MsG0780038386.01 | MsG0780041674.01 | 0.832649 | 8.377945e-56 | 9.423536e-53 |
| MsG0780038401.01 | MsG0780041674.01 | 0.850645 | 1.485607e-60 | 2.929788e-57 |
| MsG0780038602.01 | MsG0780041674.01 | 0.802483 | 5.491837e-49 | 2.693209e-46 |
| MsG0780039252.01 | MsG0780041674.01 | 0.870156 | 1.805063e-66 | 6.950735e-63 |
| MsG0780039866.01 | MsG0780041674.01 | 0.824198 | 9.188925e-54 | 8.083609e-51 |
| MsG0780040057.01 | MsG0780041674.01 | 0.832430 | 9.494508e-56 | 1.060950e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780040532.01 | MsG0780041674.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041674.01.T01 | MTR_7g115690 | 81.609 | 348 | 14 | 3 | 1 | 307 | 20 | 358 | 0.0 | 544 |
| MsG0780041674.01.T01 | MTR_1g080250 | 67.816 | 348 | 59 | 4 | 1 | 307 | 20 | 355 | 7.01e-153 | 432 |
| MsG0780041674.01.T01 | MTR_1g080250 | 67.816 | 348 | 59 | 4 | 1 | 307 | 61 | 396 | 8.74e-153 | 433 |
| MsG0780041674.01.T01 | MTR_1g080250 | 67.816 | 348 | 59 | 4 | 1 | 307 | 35 | 370 | 9.41e-153 | 432 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041674.01.T01 | AT1G08630 | 61.947 | 339 | 79 | 4 | 1 | 298 | 1 | 330 | 1.04e-144 | 411 |
| MsG0780041674.01.T01 | AT1G08630 | 61.947 | 339 | 79 | 4 | 1 | 298 | 20 | 349 | 1.15e-144 | 411 |
| MsG0780041674.01.T01 | AT1G08630 | 61.947 | 339 | 79 | 4 | 1 | 298 | 20 | 349 | 1.15e-144 | 411 |
| MsG0780041674.01.T01 | AT1G08630 | 61.947 | 339 | 79 | 4 | 1 | 298 | 20 | 349 | 1.15e-144 | 411 |
| MsG0780041674.01.T01 | AT1G08630 | 61.947 | 339 | 79 | 4 | 1 | 298 | 20 | 349 | 1.15e-144 | 411 |
| MsG0780041674.01.T01 | AT1G08630 | 61.947 | 339 | 79 | 4 | 1 | 298 | 20 | 349 | 1.15e-144 | 411 |
| MsG0780041674.01.T01 | AT3G04520 | 62.611 | 337 | 76 | 4 | 1 | 296 | 24 | 351 | 4.22e-143 | 407 |
| MsG0780041674.01.T01 | AT3G04520 | 62.611 | 337 | 76 | 4 | 1 | 296 | 24 | 351 | 4.22e-143 | 407 |
| MsG0780041674.01.T01 | AT3G04520 | 62.611 | 337 | 75 | 5 | 1 | 296 | 24 | 350 | 4.79e-141 | 402 |
| MsG0780041674.01.T01 | AT1G08630 | 59.882 | 339 | 72 | 5 | 1 | 298 | 20 | 335 | 3.40e-134 | 384 |
Find 76 sgRNAs with CRISPR-Local
Find 169 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAACAATGAAGTGCTTTA+TGG | 0.169459 | 7:+93769525 | MsG0780041674.01.T01:three_prime_UTR |
| ATACACTTTGTCGTGCTTTC+AGG | 0.173516 | 7:+93769219 | MsG0780041674.01.T01:CDS |
| CTACAAAATACTTACAATAT+TGG | 0.205905 | 7:-93768844 | None:intergenic |
| TCATTATTTCTAACTGTTCT+TGG | 0.215838 | 7:-93766877 | None:intergenic |
| TTCAGTTGTGTGAATAAGTA+TGG | 0.256450 | 7:+93769418 | MsG0780041674.01.T01:three_prime_UTR |
| GCACATCGCTATCTGATATT+TGG | 0.274562 | 7:-93769195 | None:intergenic |
| TTTGTAACACAAATAAAATA+TGG | 0.289486 | 7:+93769454 | MsG0780041674.01.T01:three_prime_UTR |
| ATTGAAATTGAAGAGAATTC+AGG | 0.311218 | 7:+93768960 | MsG0780041674.01.T01:CDS |
| GCCGGAGGACCAAATGAAAA+TGG | 0.327784 | 7:+93769341 | MsG0780041674.01.T01:CDS |
| CATATTCATATTTATGAGAA+TGG | 0.341156 | 7:+93766827 | MsG0780041674.01.T01:CDS |
| TCCAAGGACTTAGAAGAATA+TGG | 0.358787 | 7:+93769002 | MsG0780041674.01.T01:CDS |
| CACCGGTGGTAGATGCCTTT+CGG | 0.379901 | 7:+93767512 | MsG0780041674.01.T01:CDS |
| TCTTATCGTATCAGTTTCAT+TGG | 0.382501 | 7:+93769133 | MsG0780041674.01.T01:intron |
| GAAGAGATGGCAAAGATAAC+TGG | 0.383719 | 7:+93766698 | MsG0780041674.01.T01:CDS |
| AGTGAACAAGCACAGATATA+AGG | 0.384763 | 7:-93766763 | None:intergenic |
| GGATTGAAGCTTCACATTGA+TGG | 0.392047 | 7:+93767576 | MsG0780041674.01.T01:CDS |
| ATGTTGCAGCGTGCGGTTGC+CGG | 0.393302 | 7:+93769323 | MsG0780041674.01.T01:intron |
| GCCATATTCTTCTAAGTCCT+TGG | 0.397824 | 7:-93769003 | None:intergenic |
| AGAGGGAGTGAAGTAATTCT+TGG | 0.400194 | 7:+93766794 | MsG0780041674.01.T01:CDS |
| GTTTGCTTATCTAAAGGTAT+TGG | 0.427009 | 7:+93768204 | MsG0780041674.01.T01:CDS |
| TCCTTGGATAGCTTTGCTGC+TGG | 0.432710 | 7:-93768987 | None:intergenic |
| CCAGTTGGATCTGTAATTGT+TGG | 0.446162 | 7:+93768231 | MsG0780041674.01.T01:CDS |
| ATAAAATATGGAGCATAGTA+AGG | 0.446419 | 7:+93769466 | MsG0780041674.01.T01:three_prime_UTR |
| TTTGTCCCATCAGGCACTAT+GGG | 0.452519 | 7:+93766737 | MsG0780041674.01.T01:CDS |
| GATTAGGTTTGCTTATCTAA+AGG | 0.460763 | 7:+93768198 | MsG0780041674.01.T01:intron |
| TGTGTTACAAACAAAACAAA+AGG | 0.466316 | 7:-93769442 | None:intergenic |
| GAGGTCGATGATGATGTTCT+TGG | 0.472967 | 7:+93766647 | MsG0780041674.01.T01:CDS |
| TACCTTGGTTATAAAGCTGT+TGG | 0.496036 | 7:-93768256 | None:intergenic |
| TGAAACAATGCGAGTTGCTA+TGG | 0.498430 | 7:+93766616 | None:intergenic |
| GAATGGAGGCATTGCAACCC+TGG | 0.503071 | 7:+93766844 | MsG0780041674.01.T01:CDS |
| TCTTCTAAGCGTAAACAAGA+AGG | 0.503667 | 7:-93766677 | None:intergenic |
| CTTGTTCACTGCGACATAAG+AGG | 0.507878 | 7:+93766776 | MsG0780041674.01.T01:CDS |
| GTTGAATATACAGAAAGAGT+TGG | 0.511468 | 7:+93767534 | MsG0780041674.01.T01:CDS |
| GGCATCCTTCTCATGCCAAT+CGG | 0.513035 | 7:+93769023 | MsG0780041674.01.T01:CDS |
| CGCTATCTGATATTTGGTGG+TGG | 0.515490 | 7:-93769189 | None:intergenic |
| CCAACAATTACAGATCCAAC+TGG | 0.520070 | 7:-93768231 | None:intergenic |
| GTTCTTGGATGTACACCTCC+AGG | 0.521577 | 7:-93766862 | None:intergenic |
| CTGTCTCATTCCACCACCTA+AGG | 0.525977 | 7:-93768393 | None:intergenic |
| CACTTGGTGTTCCTGTGGAT+AGG | 0.527788 | 7:+93767729 | MsG0780041674.01.T01:CDS |
| AGAAGGCTCAGAAAGACCTT+AGG | 0.529362 | 7:+93768377 | MsG0780041674.01.T01:CDS |
| CATCGCTATCTGATATTTGG+TGG | 0.529995 | 7:-93769192 | None:intergenic |
| TTCTTGGATGTACACCTCCA+GGG | 0.539612 | 7:-93766861 | None:intergenic |
| TCAGGCACTTGGTGTTCCTG+TGG | 0.542119 | 7:+93767724 | MsG0780041674.01.T01:intron |
| CTTAGGTGGTGGAATGAGAC+AGG | 0.543067 | 7:+93768394 | MsG0780041674.01.T01:CDS |
| AATATTGGTTTCCACAGAAG+AGG | 0.552672 | 7:-93768829 | None:intergenic |
| CTCAGAAAGACCTTAGGTGG+TGG | 0.554851 | 7:+93768383 | MsG0780041674.01.T01:CDS |
| AAAGGTATTGGTGCTCCAGT+TGG | 0.559792 | 7:+93768216 | MsG0780041674.01.T01:CDS |
| TTTACGCTTAGAAGAAGAGA+TGG | 0.562019 | 7:+93766685 | MsG0780041674.01.T01:CDS |
| GGTTCCCCATAGTGCCTGAT+GGG | 0.562284 | 7:-93766742 | None:intergenic |
| TTGCAGCGTGCGGTTGCCGG+AGG | 0.565456 | 7:+93769326 | MsG0780041674.01.T01:intron |
| GATGGATTGAATGAAATCAA+AGG | 0.567749 | 7:+93768792 | MsG0780041674.01.T01:intron |
| AACCGAAAGGCATCTACCAC+CGG | 0.573022 | 7:-93767514 | None:intergenic |
| AGGTTCCCCATAGTGCCTGA+TGG | 0.574535 | 7:-93766743 | None:intergenic |
| TCATGCCAATCGGATCATCA+AGG | 0.575646 | 7:+93769033 | MsG0780041674.01.T01:CDS |
| GAGAGTGGATGCCTCTTCTG+TGG | 0.579995 | 7:+93768818 | MsG0780041674.01.T01:CDS |
| AGCGTAAACAAGAAGGGTCG+CGG | 0.584966 | 7:-93766670 | None:intergenic |
| ATATACAGAAAGAGTTGGAG+AGG | 0.590867 | 7:+93767539 | MsG0780041674.01.T01:CDS |
| TTCCAACAGCTTTATAACCA+AGG | 0.590972 | 7:+93768254 | MsG0780041674.01.T01:CDS |
| TGAAATCAAAGGACTGAGAG+TGG | 0.591874 | 7:+93768803 | MsG0780041674.01.T01:CDS |
| CTTCTAAGCGTAAACAAGAA+GGG | 0.596464 | 7:-93766676 | None:intergenic |
| GGAGAGGTTGCTAAGAAGCA+CGG | 0.596469 | 7:+93767555 | MsG0780041674.01.T01:CDS |
| CAAGACCTTGATGATCCGAT+TGG | 0.596889 | 7:-93769038 | None:intergenic |
| ATTCATATTTATGAGAATGG+AGG | 0.597452 | 7:+93766830 | MsG0780041674.01.T01:CDS |
| TTGTTCACTGCGACATAAGA+GGG | 0.608669 | 7:+93766777 | MsG0780041674.01.T01:CDS |
| TGTGGATAGGCTTGTTCGAG+CGG | 0.608773 | 7:+93767742 | MsG0780041674.01.T01:CDS |
| TCCAGCAGCAAAGCTATCCA+AGG | 0.609285 | 7:+93768986 | MsG0780041674.01.T01:CDS |
| AGGCTCAGAAAGACCTTAGG+TGG | 0.612425 | 7:+93768380 | MsG0780041674.01.T01:CDS |
| TTTCCTGAATGCAGCACCGG+TGG | 0.617194 | 7:+93767498 | MsG0780041674.01.T01:intron |
| GCTCGAACAAGCCTATCCAC+AGG | 0.622305 | 7:-93767740 | None:intergenic |
| TTTCTGTATATTCAACCGAA+AGG | 0.632912 | 7:-93767527 | None:intergenic |
| ATGATCCGATTGGCATGAGA+AGG | 0.633762 | 7:-93769028 | None:intergenic |
| GGTGGTGGAATGAGACAGGT+CGG | 0.635750 | 7:+93768398 | MsG0780041674.01.T01:CDS |
| CAACAAGTGCAGCTGCACAA+AGG | 0.642170 | 7:-93768424 | None:intergenic |
| TTGTCCCATCAGGCACTATG+GGG | 0.644998 | 7:+93766738 | MsG0780041674.01.T01:CDS |
| AGTTGCTATGGCAAACGCTG+AGG | 0.668418 | 7:+93766628 | MsG0780041674.01.T01:CDS |
| TGGAGGCATTGCAACCCTGG+AGG | 0.712312 | 7:+93766847 | MsG0780041674.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAACTTTACATTATTAAAA+AGG | - | Chr7:93767414-93767433 | None:intergenic | 10.0% |
| !! | AGGTTTAATTCATAATTTAT+CGG | + | Chr7:93769486-93769505 | MsG0780041674.01.T01:intron | 15.0% |
| !! | CTTTGAATATATATATGATT+AGG | + | Chr7:93768182-93768201 | MsG0780041674.01.T01:intron | 15.0% |
| !! | GAGTAAATTACTTTAATAAA+AGG | - | Chr7:93769106-93769125 | None:intergenic | 15.0% |
| !! | TTTGTAACACAAATAAAATA+TGG | + | Chr7:93769454-93769473 | MsG0780041674.01.T01:three_prime_UTR | 15.0% |
| !!! | ACTAATTCATTTTATAACTA+AGG | + | Chr7:93767358-93767377 | MsG0780041674.01.T01:intron | 15.0% |
| !!! | TATATTTCTTTTCTTTTTCT+TGG | + | Chr7:93769270-93769289 | MsG0780041674.01.T01:intron | 15.0% |
| !! | AGTTAGAGGAAAAAATTTAA+AGG | - | Chr7:93768763-93768782 | None:intergenic | 20.0% |
| !! | ATATTGCTGAAATAATAGAA+AGG | + | Chr7:93767085-93767104 | MsG0780041674.01.T01:intron | 20.0% |
| !! | ATGTCAATACTTATTCTTAT+TGG | + | Chr7:93768024-93768043 | MsG0780041674.01.T01:intron | 20.0% |
| !! | ATTACCAAATTCAAATCAAA+AGG | + | Chr7:93768130-93768149 | MsG0780041674.01.T01:intron | 20.0% |
| !! | CATATTCATATTTATGAGAA+TGG | + | Chr7:93766827-93766846 | MsG0780041674.01.T01:CDS | 20.0% |
| !! | CTACAAAATACTTACAATAT+TGG | - | Chr7:93768847-93768866 | None:intergenic | 20.0% |
| !! | CTTCAATTTCAATATATATC+TGG | - | Chr7:93768953-93768972 | None:intergenic | 20.0% |
| !! | GTTAGAGGAAAAAATTTAAA+GGG | - | Chr7:93768762-93768781 | None:intergenic | 20.0% |
| !! | TGTGTAGAAAATGTAAATAA+TGG | - | Chr7:93767250-93767269 | None:intergenic | 20.0% |
| !!! | ATAACCTTTTGATTTGAATT+TGG | - | Chr7:93768137-93768156 | None:intergenic | 20.0% |
| !!! | ATTATTATCAGTTTTGTGTT+TGG | - | Chr7:93768558-93768577 | None:intergenic | 20.0% |
| !!! | GTATGTATATATGCTATTTT+AGG | + | Chr7:93768352-93768371 | MsG0780041674.01.T01:intron | 20.0% |
| !!! | TTTTTGTGTCTTTATTTGAT+AGG | - | Chr7:93768531-93768550 | None:intergenic | 20.0% |
| ! | AAAGTTAAGAATTCCTTCAA+TGG | + | Chr7:93767426-93767445 | MsG0780041674.01.T01:intron | 25.0% |
| ! | ACAGTTAGAAATAATGAAGA+TGG | + | Chr7:93766883-93766902 | MsG0780041674.01.T01:intron | 25.0% |
| ! | ACTAGTATGAATGAAATGAA+TGG | - | Chr7:93768873-93768892 | None:intergenic | 25.0% |
| ! | AGTTGTTTATATATGATAGC+AGG | - | Chr7:93767682-93767701 | None:intergenic | 25.0% |
| ! | ATAAAATATGGAGCATAGTA+AGG | + | Chr7:93769466-93769485 | MsG0780041674.01.T01:three_prime_UTR | 25.0% |
| ! | ATAATATAGACAACCATTGA+AGG | - | Chr7:93767442-93767461 | None:intergenic | 25.0% |
| ! | ATGTTCCATAGTTAGAAAAA+AGG | + | Chr7:93767846-93767865 | MsG0780041674.01.T01:intron | 25.0% |
| ! | ATTCATATTTATGAGAATGG+AGG | + | Chr7:93766830-93766849 | MsG0780041674.01.T01:CDS | 25.0% |
| ! | ATTGAAATTGAAGAGAATTC+AGG | + | Chr7:93768960-93768979 | MsG0780041674.01.T01:CDS | 25.0% |
| ! | ATTTCATTCAATCCATCTAA+AGG | - | Chr7:93768789-93768808 | None:intergenic | 25.0% |
| ! | ATTTGTTTGGAAAATTCTCA+TGG | + | Chr7:93766982-93767001 | MsG0780041674.01.T01:intron | 25.0% |
| ! | GAAATATATACAGCAAAACA+AGG | - | Chr7:93769258-93769277 | None:intergenic | 25.0% |
| ! | TATTCAAAGTAATCACAAGT+TGG | - | Chr7:93768171-93768190 | None:intergenic | 25.0% |
| ! | TCATTTATAACCACATTTGT+TGG | + | Chr7:93768598-93768617 | MsG0780041674.01.T01:intron | 25.0% |
| ! | TGTGTTACAAACAAAACAAA+AGG | - | Chr7:93769445-93769464 | None:intergenic | 25.0% |
| !! | TCTTTTACCTTCTCTTTTAT+TGG | + | Chr7:93767789-93767808 | MsG0780041674.01.T01:intron | 25.0% |
| !!! | AACATCCTTTTTTCTAACTA+TGG | - | Chr7:93767854-93767873 | None:intergenic | 25.0% |
| !!! | ACAGAAAATTTTGGTTTTTC+AGG | + | Chr7:93767706-93767725 | MsG0780041674.01.T01:intron | 25.0% |
| !!! | ATAACGATTTTGAAATACCT+TGG | - | Chr7:93768274-93768293 | None:intergenic | 25.0% |
| !!! | TAGTAATGTTTTGTTGGATA+CGG | + | Chr7:93767038-93767057 | MsG0780041674.01.T01:intron | 25.0% |
| !!! | TCATTATTTCTAACTGTTCT+TGG | - | Chr7:93766880-93766899 | None:intergenic | 25.0% |
| AAATAATGAAGATGGAACCA+TGG | + | Chr7:93766891-93766910 | MsG0780041674.01.T01:intron | 30.0% | |
| AAGTACAGTAAAAACATGCT+AGG | - | Chr7:93767227-93767246 | None:intergenic | 30.0% | |
| ATCATGTCCAATAAAAGAGA+AGG | - | Chr7:93767799-93767818 | None:intergenic | 30.0% | |
| CAACATTGTAAAGAACATAC+CGG | - | Chr7:93768507-93768526 | None:intergenic | 30.0% | |
| CAACATTTAGTATAGTGTCA+TGG | + | Chr7:93768079-93768098 | MsG0780041674.01.T01:intron | 30.0% | |
| CATGACACTATACTAAATGT+TGG | - | Chr7:93768081-93768100 | None:intergenic | 30.0% | |
| CTCAATCAAATCAATATCCA+TGG | - | Chr7:93766911-93766930 | None:intergenic | 30.0% | |
| GCTCATAGTTTACTGATAAA+TGG | + | Chr7:93767060-93767079 | MsG0780041674.01.T01:intron | 30.0% | |
| GGTGTTAAGTAGATGTTAAT+TGG | + | Chr7:93768683-93768702 | MsG0780041674.01.T01:intron | 30.0% | |
| GTTGAATATACAGAAAGAGT+TGG | + | Chr7:93767534-93767553 | MsG0780041674.01.T01:CDS | 30.0% | |
| TCTTATCGTATCAGTTTCAT+TGG | + | Chr7:93769133-93769152 | MsG0780041674.01.T01:intron | 30.0% | |
| TGAAATTGTGATATACTTGC+TGG | + | Chr7:93767899-93767918 | MsG0780041674.01.T01:intron | 30.0% | |
| TTCAGTTGTGTGAATAAGTA+TGG | + | Chr7:93769418-93769437 | MsG0780041674.01.T01:three_prime_UTR | 30.0% | |
| TTTCTGTATATTCAACCGAA+AGG | - | Chr7:93767530-93767549 | None:intergenic | 30.0% | |
| ! | CAACTCATGACAGAAAATTT+TGG | + | Chr7:93767697-93767716 | MsG0780041674.01.T01:intron | 30.0% |
| ! | CTTTTATTGGACATGATTCT+TGG | + | Chr7:93767802-93767821 | MsG0780041674.01.T01:intron | 30.0% |
| ! | GATTAGGTTTGCTTATCTAA+AGG | + | Chr7:93768198-93768217 | MsG0780041674.01.T01:intron | 30.0% |
| ! | GTTTGCTTATCTAAAGGTAT+TGG | + | Chr7:93768204-93768223 | MsG0780041674.01.T01:CDS | 30.0% |
| ! | TCACAAGAATGCTAGATTTT+TGG | + | Chr7:93768481-93768500 | MsG0780041674.01.T01:CDS | 30.0% |
| ! | TCACTCTAGTAATGTTTTGT+TGG | + | Chr7:93767032-93767051 | MsG0780041674.01.T01:intron | 30.0% |
| ! | TTTTATAGCCCTTCATTCAA+AGG | - | Chr7:93767300-93767319 | None:intergenic | 30.0% |
| !! | AGCTAGTTTCCATTTTCATT+TGG | - | Chr7:93769353-93769372 | None:intergenic | 30.0% |
| !! | CATGGATATTGATTTGATTG+AGG | + | Chr7:93766909-93766928 | MsG0780041674.01.T01:intron | 30.0% |
| !! | GATGGATTGAATGAAATCAA+AGG | + | Chr7:93768792-93768811 | MsG0780041674.01.T01:intron | 30.0% |
| !!! | ATATGCTATTTTAGGCTAGA+AGG | + | Chr7:93768360-93768379 | MsG0780041674.01.T01:intron | 30.0% |
| ACAACAAACACCAACAAATG+TGG | - | Chr7:93768611-93768630 | None:intergenic | 35.0% | |
| AGTGAACAAGCACAGATATA+AGG | - | Chr7:93766766-93766785 | None:intergenic | 35.0% | |
| ATATACAGAAAGAGTTGGAG+AGG | + | Chr7:93767539-93767558 | MsG0780041674.01.T01:CDS | 35.0% | |
| CTGCAATTAGAGATCCAAAA+GGG | + | Chr7:93766932-93766951 | MsG0780041674.01.T01:intron | 35.0% | |
| CTTCTAAGCGTAAACAAGAA+GGG | - | Chr7:93766679-93766698 | None:intergenic | 35.0% | |
| TACCTTGGTTATAAAGCTGT+TGG | - | Chr7:93768259-93768278 | None:intergenic | 35.0% | |
| TCCAAGGACTTAGAAGAATA+TGG | + | Chr7:93769002-93769021 | MsG0780041674.01.T01:CDS | 35.0% | |
| TCTTCTAAGCGTAAACAAGA+AGG | - | Chr7:93766680-93766699 | None:intergenic | 35.0% | |
| TGCAATTAGAGATCCAAAAG+GGG | + | Chr7:93766933-93766952 | MsG0780041674.01.T01:intron | 35.0% | |
| TTCTAACCAAGAAACATCTC+AGG | - | Chr7:93767928-93767947 | None:intergenic | 35.0% | |
| TTTACGCTTAGAAGAAGAGA+TGG | + | Chr7:93766685-93766704 | MsG0780041674.01.T01:CDS | 35.0% | |
| ! | GTCATGGCAATGACAATTTT+AGG | + | Chr7:93768095-93768114 | MsG0780041674.01.T01:intron | 35.0% |
| ! | GTGAACAATGAAGTGCTTTA+TGG | + | Chr7:93769525-93769544 | MsG0780041674.01.T01:three_prime_UTR | 35.0% |
| ! | TTCCAACAGCTTTATAACCA+AGG | + | Chr7:93768254-93768273 | MsG0780041674.01.T01:CDS | 35.0% |
| ! | TTCTTCAACCTTGAAGTACT+CGG | + | Chr7:93767953-93767972 | MsG0780041674.01.T01:intron | 35.0% |
| !! | AATATTGGTTTCCACAGAAG+AGG | - | Chr7:93768832-93768851 | None:intergenic | 35.0% |
| !! | CAGCTTTGAGTTCTTTAATC+TGG | + | Chr7:93767654-93767673 | MsG0780041674.01.T01:intron | 35.0% |
| !! | TTGTTGGTGTTTGTTGTTCT+CGG | + | Chr7:93768614-93768633 | MsG0780041674.01.T01:intron | 35.0% |
| !!! | AAGAATGCTAGATTTTTGGC+CGG | + | Chr7:93768485-93768504 | MsG0780041674.01.T01:CDS | 35.0% |
| !!! | ATTTTGGTTTTTCAGGCACT+TGG | + | Chr7:93767713-93767732 | MsG0780041674.01.T01:intron | 35.0% |
| AACCACAAGGCTCATTTGTT+TGG | + | Chr7:93766969-93766988 | MsG0780041674.01.T01:intron | 40.0% | |
| AGAGGGAGTGAAGTAATTCT+TGG | + | Chr7:93766794-93766813 | MsG0780041674.01.T01:CDS | 40.0% | |
| ATACACTTTGTCGTGCTTTC+AGG | + | Chr7:93769219-93769238 | MsG0780041674.01.T01:CDS | 40.0% | |
| CATCGCTATCTGATATTTGG+TGG | - | Chr7:93769195-93769214 | None:intergenic | 40.0% | |
| CCAACAATTACAGATCCAAC+TGG | - | Chr7:93768234-93768253 | None:intergenic | 40.0% | |
| CCAGTTGGATCTGTAATTGT+TGG | + | Chr7:93768231-93768250 | MsG0780041674.01.T01:CDS | 40.0% | |
| CCATCTAAAGGACAAGTTAG+AGG | - | Chr7:93768777-93768796 | None:intergenic | 40.0% | |
| GAAGAGATGGCAAAGATAAC+TGG | + | Chr7:93766698-93766717 | MsG0780041674.01.T01:CDS | 40.0% | |
| GCACATCGCTATCTGATATT+TGG | - | Chr7:93769198-93769217 | None:intergenic | 40.0% | |
| GCCATATTCTTCTAAGTCCT+TGG | - | Chr7:93769006-93769025 | None:intergenic | 40.0% | |
| GCTGCAATTAGAGATCCAAA+AGG | + | Chr7:93766931-93766950 | MsG0780041674.01.T01:intron | 40.0% | |
| GGATTGAAGCTTCACATTGA+TGG | + | Chr7:93767576-93767595 | MsG0780041674.01.T01:CDS | 40.0% | |
| TGAAATCAAAGGACTGAGAG+TGG | + | Chr7:93768803-93768822 | MsG0780041674.01.T01:CDS | 40.0% | |
| TGGTTTCCTGAGATGTTTCT+TGG | + | Chr7:93767919-93767938 | MsG0780041674.01.T01:intron | 40.0% | |
| TTATTGAATGTTGCAGCGTG+CGG | + | Chr7:93769316-93769335 | MsG0780041674.01.T01:intron | 40.0% | |
| TTCCAAACAAATGAGCCTTG+TGG | - | Chr7:93766974-93766993 | None:intergenic | 40.0% | |
| TTGTTCACTGCGACATAAGA+GGG | + | Chr7:93766777-93766796 | MsG0780041674.01.T01:CDS | 40.0% | |
| ! | AAACAAATGAGCCTTGTGGT+TGG | - | Chr7:93766970-93766989 | None:intergenic | 40.0% |
| ! | AGCTTGTTTATCCAACCACA+AGG | + | Chr7:93766956-93766975 | MsG0780041674.01.T01:intron | 40.0% |
| ! | CCTCTAACTTGTCCTTTAGA+TGG | + | Chr7:93768774-93768793 | MsG0780041674.01.T01:intron | 40.0% |
| ! | CTTCAAACAGACTAGCTAGT+AGG | - | Chr7:93768721-93768740 | None:intergenic | 40.0% |
| ! | TCCATTTTCATTTGGTCCTC+CGG | - | Chr7:93769345-93769364 | None:intergenic | 40.0% |
| AACGGACACCCTTCAATATC+AGG | + | Chr7:93768656-93768675 | MsG0780041674.01.T01:intron | 45.0% | |
| ACGGACACCCTTCAATATCA+GGG | + | Chr7:93768657-93768676 | MsG0780041674.01.T01:intron | 45.0% | |
| ACTCTGCTGCCTTTGAATGA+AGG | + | Chr7:93767288-93767307 | MsG0780041674.01.T01:intron | 45.0% | |
| AGAAGGCTCAGAAAGACCTT+AGG | + | Chr7:93768377-93768396 | MsG0780041674.01.T01:CDS | 45.0% | |
| ATGATCCGATTGGCATGAGA+AGG | - | Chr7:93769031-93769050 | None:intergenic | 45.0% | |
| CACTGACACATGTTGGACAA+CGG | + | Chr7:93768638-93768657 | MsG0780041674.01.T01:intron | 45.0% | |
| CTCTGCTGCCTTTGAATGAA+GGG | + | Chr7:93767289-93767308 | MsG0780041674.01.T01:intron | 45.0% | |
| CTTGTTCACTGCGACATAAG+AGG | + | Chr7:93766776-93766795 | MsG0780041674.01.T01:CDS | 45.0% | |
| TACTGCAACTACTCTGCAGT+CGG | + | Chr7:93767108-93767127 | MsG0780041674.01.T01:intron | 45.0% | |
| TCATGCCAATCGGATCATCA+AGG | + | Chr7:93769033-93769052 | MsG0780041674.01.T01:CDS | 45.0% | |
| TTCTTGGATGTACACCTCCA+GGG | - | Chr7:93766864-93766883 | None:intergenic | 45.0% | |
| TTGTTTCCTGAATGCAGCAC+CGG | + | Chr7:93767495-93767514 | MsG0780041674.01.T01:intron | 45.0% | |
| TTTGTCCCATCAGGCACTAT+GGG | + | Chr7:93766737-93766756 | MsG0780041674.01.T01:CDS | 45.0% | |
| ! | CAAGACCTTGATGATCCGAT+TGG | - | Chr7:93769041-93769060 | None:intergenic | 45.0% |
| ! | CGAGATTTGTTCACGGAGTT+CGG | - | Chr7:93767152-93767171 | None:intergenic | 45.0% |
| ! | CGCTATCTGATATTTGGTGG+TGG | - | Chr7:93769192-93769211 | None:intergenic | 45.0% |
| ! | GAGCACACGAGATTTGTTCA+CGG | - | Chr7:93767159-93767178 | None:intergenic | 45.0% |
| ! | GAGGTCGATGATGATGTTCT+TGG | + | Chr7:93766647-93766666 | MsG0780041674.01.T01:CDS | 45.0% |
| ! | GGATAAACAAGCTCCCCTTT+TGG | - | Chr7:93766949-93766968 | None:intergenic | 45.0% |
| ! | TCGTGCTTTCAGGTGATGAT+CGG | + | Chr7:93769229-93769248 | MsG0780041674.01.T01:intron | 45.0% |
| ! | TTTTGTCCCATCAGGCACTA+TGG | + | Chr7:93766736-93766755 | MsG0780041674.01.T01:CDS | 45.0% |
| !! | AAAGGTATTGGTGCTCCAGT+TGG | + | Chr7:93768216-93768235 | MsG0780041674.01.T01:CDS | 45.0% |
| ACACCGACCCCTGATATTGA+AGG | - | Chr7:93768668-93768687 | None:intergenic | 50.0% | |
| AGCGTAAACAAGAAGGGTCG+CGG | - | Chr7:93766673-93766692 | None:intergenic | 50.0% | |
| AGGCTCAGAAAGACCTTAGG+TGG | + | Chr7:93768380-93768399 | MsG0780041674.01.T01:CDS | 50.0% | |
| AGTTGCTATGGCAAACGCTG+AGG | + | Chr7:93766628-93766647 | MsG0780041674.01.T01:CDS | 50.0% | |
| CAACAAGTGCAGCTGCACAA+AGG | - | Chr7:93768427-93768446 | None:intergenic | 50.0% | |
| CACCCTTCAATATCAGGGGT+CGG | + | Chr7:93768662-93768681 | MsG0780041674.01.T01:intron | 50.0% | |
| CACCGACCCCTGATATTGAA+GGG | - | Chr7:93768667-93768686 | None:intergenic | 50.0% | |
| CGGACACCCTTCAATATCAG+GGG | + | Chr7:93768658-93768677 | MsG0780041674.01.T01:intron | 50.0% | |
| CTCAGAAAGACCTTAGGTGG+TGG | + | Chr7:93768383-93768402 | MsG0780041674.01.T01:CDS | 50.0% | |
| CTGTCTCATTCCACCACCTA+AGG | - | Chr7:93768396-93768415 | None:intergenic | 50.0% | |
| GCCGGAGGACCAAATGAAAA+TGG | + | Chr7:93769341-93769360 | MsG0780041674.01.T01:CDS | 50.0% | |
| GCTTCGAACCGAGTACTTCA+AGG | - | Chr7:93767964-93767983 | None:intergenic | 50.0% | |
| GGAGAGGTTGCTAAGAAGCA+CGG | + | Chr7:93767555-93767574 | MsG0780041674.01.T01:CDS | 50.0% | |
| GGCATCCTTCTCATGCCAAT+CGG | + | Chr7:93769023-93769042 | MsG0780041674.01.T01:CDS | 50.0% | |
| GTCGGAGATGTAGGCAGAAT+TGG | + | Chr7:93767126-93767145 | MsG0780041674.01.T01:intron | 50.0% | |
| GTTCTTGGATGTACACCTCC+AGG | - | Chr7:93766865-93766884 | None:intergenic | 50.0% | |
| TACTCTGCAGTCGGAGATGT+AGG | + | Chr7:93767117-93767136 | MsG0780041674.01.T01:intron | 50.0% | |
| TCCAGCAGCAAAGCTATCCA+AGG | + | Chr7:93768986-93769005 | MsG0780041674.01.T01:CDS | 50.0% | |
| TCTCGGACACTGACACATGT+TGG | + | Chr7:93768631-93768650 | MsG0780041674.01.T01:intron | 50.0% | |
| TTGTCCCATCAGGCACTATG+GGG | + | Chr7:93766738-93766757 | MsG0780041674.01.T01:CDS | 50.0% | |
| ! | GCTGCTCTTTTTGTCCCATC+AGG | + | Chr7:93766728-93766747 | MsG0780041674.01.T01:CDS | 50.0% |
| ! | TCCTTGGATAGCTTTGCTGC+TGG | - | Chr7:93768990-93769009 | None:intergenic | 50.0% |
| ! | TGTGGATAGGCTTGTTCGAG+CGG | + | Chr7:93767742-93767761 | MsG0780041674.01.T01:CDS | 50.0% |
| !! | AACCGAAAGGCATCTACCAC+CGG | - | Chr7:93767517-93767536 | None:intergenic | 50.0% |
| !! | CACTTGGTGTTCCTGTGGAT+AGG | + | Chr7:93767729-93767748 | MsG0780041674.01.T01:CDS | 50.0% |
| !! | CTTAGGTGGTGGAATGAGAC+AGG | + | Chr7:93768394-93768413 | MsG0780041674.01.T01:CDS | 50.0% |
| AGGTTCCCCATAGTGCCTGA+TGG | - | Chr7:93766746-93766765 | None:intergenic | 55.0% | |
| CACCGGTGGTAGATGCCTTT+CGG | + | Chr7:93767512-93767531 | MsG0780041674.01.T01:CDS | 55.0% | |
| GAGAGTGGATGCCTCTTCTG+TGG | + | Chr7:93768818-93768837 | MsG0780041674.01.T01:CDS | 55.0% | |
| GCTCGAACAAGCCTATCCAC+AGG | - | Chr7:93767743-93767762 | None:intergenic | 55.0% | |
| GGTTCCCCATAGTGCCTGAT+GGG | - | Chr7:93766745-93766764 | None:intergenic | 55.0% | |
| ! | TTTCCTGAATGCAGCACCGG+TGG | + | Chr7:93767498-93767517 | MsG0780041674.01.T01:intron | 55.0% |
| !! | GAATGGAGGCATTGCAACCC+TGG | + | Chr7:93766844-93766863 | MsG0780041674.01.T01:CDS | 55.0% |
| !! | GGTGGTGGAATGAGACAGGT+CGG | + | Chr7:93768398-93768417 | MsG0780041674.01.T01:CDS | 55.0% |
| !! | TCAGGCACTTGGTGTTCCTG+TGG | + | Chr7:93767724-93767743 | MsG0780041674.01.T01:intron | 55.0% |
| ATGTTGCAGCGTGCGGTTGC+CGG | + | Chr7:93769323-93769342 | MsG0780041674.01.T01:intron | 60.0% | |
| !! | CTACCACCGGTGCTGCATTC+AGG | - | Chr7:93767504-93767523 | None:intergenic | 60.0% |
| !! | TGGAGGCATTGCAACCCTGG+AGG | + | Chr7:93766847-93766866 | MsG0780041674.01.T01:CDS | 60.0% |
| TTGCAGCGTGCGGTTGCCGG+AGG | + | Chr7:93769326-93769345 | MsG0780041674.01.T01:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 93766623 | 93769565 | 93766623 | ID=MsG0780041674.01;Name=MsG0780041674.01 |
| Chr7 | mRNA | 93766623 | 93769565 | 93766623 | ID=MsG0780041674.01.T01;Parent=MsG0780041674.01;Name=MsG0780041674.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0.77|0.8|1|0.88|0.8|10|175|307 |
| Chr7 | exon | 93766623 | 93766885 | 93766623 | ID=MsG0780041674.01.T01:exon:22231;Parent=MsG0780041674.01.T01 |
| Chr7 | exon | 93767512 | 93767623 | 93767512 | ID=MsG0780041674.01.T01:exon:22232;Parent=MsG0780041674.01.T01 |
| Chr7 | exon | 93767728 | 93767778 | 93767728 | ID=MsG0780041674.01.T01:exon:22233;Parent=MsG0780041674.01.T01 |
| Chr7 | exon | 93768204 | 93768275 | 93768204 | ID=MsG0780041674.01.T01:exon:22234;Parent=MsG0780041674.01.T01 |
| Chr7 | exon | 93768374 | 93768506 | 93768374 | ID=MsG0780041674.01.T01:exon:22235;Parent=MsG0780041674.01.T01 |
| Chr7 | exon | 93768793 | 93768851 | 93768793 | ID=MsG0780041674.01.T01:exon:22236;Parent=MsG0780041674.01.T01 |
| Chr7 | exon | 93768954 | 93769054 | 93768954 | ID=MsG0780041674.01.T01:exon:22237;Parent=MsG0780041674.01.T01 |
| Chr7 | exon | 93769147 | 93769240 | 93769147 | ID=MsG0780041674.01.T01:exon:22238;Parent=MsG0780041674.01.T01 |
| Chr7 | exon | 93769332 | 93769500 | 93769332 | ID=MsG0780041674.01.T01:exon:22239;Parent=MsG0780041674.01.T01 |
| Chr7 | exon | 93769521 | 93769565 | 93769521 | ID=MsG0780041674.01.T01:exon:22240;Parent=MsG0780041674.01.T01 |
| Chr7 | CDS | 93766623 | 93766885 | 93766623 | ID=MsG0780041674.01.T01:cds;Parent=MsG0780041674.01.T01 |
| Chr7 | CDS | 93767512 | 93767623 | 93767512 | ID=MsG0780041674.01.T01:cds;Parent=MsG0780041674.01.T01 |
| Chr7 | CDS | 93767728 | 93767778 | 93767728 | ID=MsG0780041674.01.T01:cds;Parent=MsG0780041674.01.T01 |
| Chr7 | CDS | 93768204 | 93768275 | 93768204 | ID=MsG0780041674.01.T01:cds;Parent=MsG0780041674.01.T01 |
| Chr7 | CDS | 93768374 | 93768506 | 93768374 | ID=MsG0780041674.01.T01:cds;Parent=MsG0780041674.01.T01 |
| Chr7 | CDS | 93768793 | 93768851 | 93768793 | ID=MsG0780041674.01.T01:cds;Parent=MsG0780041674.01.T01 |
| Chr7 | CDS | 93768954 | 93769054 | 93768954 | ID=MsG0780041674.01.T01:cds;Parent=MsG0780041674.01.T01 |
| Chr7 | CDS | 93769147 | 93769240 | 93769147 | ID=MsG0780041674.01.T01:cds;Parent=MsG0780041674.01.T01 |
| Chr7 | CDS | 93769332 | 93769370 | 93769332 | ID=MsG0780041674.01.T01:cds;Parent=MsG0780041674.01.T01 |
| Chr7 | three_prime_UTR | 93769371 | 93769500 | 93769371 | ID=MsG0780041674.01.T01:three_prime_utr;Parent=MsG0780041674.01.T01 |
| Chr7 | three_prime_UTR | 93769521 | 93769565 | 93769521 | ID=MsG0780041674.01.T01:three_prime_utr;Parent=MsG0780041674.01.T01 |
| Gene Sequence |
| Protein sequence |
