AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040638.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040638.01.T01 MTR_4g057850 98.697 307 4 0 3 309 4 310 0.0 624
MsG0780040638.01.T01 MTR_4g018750 29.167 288 179 8 23 297 17 292 1.20e-30 117
MsG0780040638.01.T01 MTR_4g018750 28.495 186 115 6 14 191 112 287 5.11e-11 62.8
MsG0780040638.01.T01 MTR_1g090330 30.851 282 183 6 18 292 11 287 1.06e-29 115
MsG0780040638.01.T01 MTR_1g090330 28.986 207 132 6 2 197 91 293 8.23e-16 76.6
MsG0780040638.01.T01 MTR_7g066690 28.028 289 181 9 23 297 19 294 1.04e-25 104
MsG0780040638.01.T01 MTR_7g066690 29.891 184 110 7 17 191 116 289 2.82e-11 63.5
MsG0780040638.01.T01 MTR_7g109135 27.500 280 194 5 19 292 20 296 2.16e-25 103
MsG0780040638.01.T01 MTR_4g012850 33.206 262 158 9 22 277 17 267 2.83e-25 103
MsG0780040638.01.T01 MTR_4g012850 29.208 202 112 7 9 193 97 284 2.70e-11 63.5
MsG0780040638.01.T01 MTR_3g100570 26.299 308 188 8 22 298 7 306 6.75e-24 99.8
MsG0780040638.01.T01 MTR_3g100570 27.650 217 133 6 1 201 102 310 1.02e-12 67.8
MsG0780040638.01.T01 MTR_4g018750 28.679 265 163 9 23 273 17 269 8.47e-24 99.0
MsG0780040638.01.T01 MTR_4g018750 32.955 176 102 6 117 283 18 186 5.96e-17 79.7
MsG0780040638.01.T01 MTR_3g462140 28.261 276 176 6 34 297 28 293 2.63e-23 97.8
MsG0780040638.01.T01 MTR_1g097890 30.314 287 158 10 18 297 48 299 5.03e-23 97.1
MsG0780040638.01.T01 MTR_6g034515 29.845 258 160 7 33 283 79 322 1.20e-22 97.1
MsG0780040638.01.T01 MTR_8g076760 27.660 282 184 8 35 301 28 304 1.79e-22 95.5
MsG0780040638.01.T01 MTR_8g076760 25.112 223 149 7 1 206 91 312 1.18e-15 76.6
MsG0780040638.01.T01 MTR_1g088995 29.963 267 172 6 36 298 48 303 5.20e-22 94.4
MsG0780040638.01.T01 MTR_5g055410 26.236 263 183 5 37 292 37 295 9.58e-22 94.4
MsG0780040638.01.T01 MTR_5g055410 37.662 154 92 4 128 281 33 182 1.04e-11 65.1
MsG0780040638.01.T01 MTR_2g436930 26.214 309 186 10 19 292 13 314 2.13e-21 92.8
MsG0780040638.01.T01 MTR_2g436930 28.889 180 114 4 128 296 27 203 1.53e-15 76.3
MsG0780040638.01.T01 MTR_1g087840 27.037 270 172 8 37 292 35 293 4.29e-21 91.7
MsG0780040638.01.T01 MTR_1g087840 30.899 178 111 3 129 297 32 206 4.23e-13 68.9
MsG0780040638.01.T01 MTR_8g098240 30.189 265 165 9 21 282 320 567 5.67e-21 93.6
MsG0780040638.01.T01 MTR_5g030530 29.371 286 177 9 23 292 10 286 8.35e-21 90.9
MsG0780040638.01.T01 MTR_5g030530 31.818 176 109 5 127 294 19 191 7.77e-17 79.7
MsG0780040638.01.T01 MTR_8g092080 30.508 295 156 11 22 305 53 309 1.52e-20 90.5
MsG0780040638.01.T01 MTR_8g086070 27.273 297 198 10 14 306 17 299 2.99e-20 89.4
MsG0780040638.01.T01 MTR_3g107510 24.382 283 192 7 16 292 117 383 4.72e-20 90.1
MsG0780040638.01.T01 MTR_3g107510 29.452 146 97 2 163 308 162 301 6.36e-12 66.2
MsG0780040638.01.T01 MTR_7g109135 25.000 280 194 5 19 292 20 289 5.53e-20 88.6
MsG0780040638.01.T01 MTR_5g073040 28.975 283 171 10 22 292 40 304 1.18e-19 88.2
MsG0780040638.01.T01 MTR_1g012030 25.267 281 192 7 16 292 134 400 3.30e-19 87.8
MsG0780040638.01.T01 MTR_1g012030 29.255 188 114 6 3 182 215 391 5.54e-14 72.4
MsG0780040638.01.T01 MTR_4g119770 24.127 315 199 8 19 298 12 321 3.39e-19 86.7
MsG0780040638.01.T01 MTR_3g025800 26.129 310 197 7 8 290 15 319 4.69e-19 86.7
MsG0780040638.01.T01 MTR_7g064980 25.083 303 197 11 9 292 13 304 6.59e-19 85.9
MsG0780040638.01.T01 MTR_7g064980 25.123 203 148 4 1 201 114 314 2.58e-12 67.0
MsG0780040638.01.T01 MTR_8g066975 27.875 287 180 10 23 292 10 286 2.93e-18 83.6
MsG0780040638.01.T01 MTR_8g066975 30.114 176 112 4 127 294 19 191 9.42e-14 70.9
MsG0780040638.01.T01 MTR_5g081150 25.566 309 198 10 3 292 16 311 9.23e-18 82.8
MsG0780040638.01.T01 MTR_5g009500 26.936 297 184 9 22 292 39 328 1.44e-17 82.4
MsG0780040638.01.T01 MTR_2g102010 31.599 269 166 9 22 283 18 275 4.67e-17 80.1
MsG0780040638.01.T01 MTR_7g109135 29.091 165 114 3 128 292 36 197 1.06e-16 77.8
MsG0780040638.01.T01 MTR_4g119770 28.022 182 115 3 128 296 26 204 1.36e-16 78.6
MsG0780040638.01.T01 MTR_4g119770 22.835 254 164 6 19 245 12 260 7.42e-11 62.0
MsG0780040638.01.T01 MTR_8g068890 26.129 310 188 10 22 298 7 308 1.39e-16 79.3
MsG0780040638.01.T01 MTR_7g109135 29.091 165 114 3 128 292 57 218 2.96e-16 77.0
MsG0780040638.01.T01 MTR_3g098460 24.399 291 186 10 22 298 206 476 3.41e-16 79.3
MsG0780040638.01.T01 MTR_3g104500 23.944 284 188 7 27 291 37 311 3.46e-16 78.2
MsG0780040638.01.T01 MTR_3g104500 26.554 177 121 5 129 298 47 221 1.24e-11 64.7
MsG0780040638.01.T01 MTR_5g032420 25.868 317 187 9 22 298 7 315 7.00e-16 77.4
MsG0780040638.01.T01 MTR_7g084400 24.662 296 194 8 13 298 205 481 1.69e-15 77.0
MsG0780040638.01.T01 MTR_8g027975 25.914 301 184 10 22 292 52 343 5.46e-15 75.1
MsG0780040638.01.T01 MTR_8g027975 31.214 173 111 5 130 298 65 233 1.92e-13 70.5
MsG0780040638.01.T01 MTR_4g094578 27.931 290 176 12 22 298 30 299 6.50e-15 74.3
MsG0780040638.01.T01 MTR_7g068340 22.857 280 187 9 37 306 103 363 2.15e-14 73.6
MsG0780040638.01.T01 MTR_4g088545 22.483 298 213 7 18 301 9 302 2.26e-14 72.8
MsG0780040638.01.T01 MTR_4g088545 28.283 198 127 7 107 296 2 192 1.70e-12 67.4
MsG0780040638.01.T01 MTR_8g096050 24.382 283 196 8 22 298 228 498 5.74e-14 72.4
MsG0780040638.01.T01 MTR_6g015860 25.979 281 176 11 23 284 21 288 1.16e-13 70.9
MsG0780040638.01.T01 MTR_4g088545 26.374 182 126 4 18 192 9 189 3.78e-13 68.6
MsG0780040638.01.T01 MTR_4g088545 28.283 198 127 7 107 296 2 192 1.00e-12 67.4
MsG0780040638.01.T01 MTR_4g088545 28.283 198 127 7 107 296 2 192 4.07e-13 68.2
MsG0780040638.01.T01 MTR_4g088545 26.374 182 126 4 18 192 9 189 4.99e-13 67.8
MsG0780040638.01.T01 MTR_5g024770 24.648 284 167 10 25 298 21 267 4.78e-13 68.9
MsG0780040638.01.T01 MTR_2g436930 27.273 209 127 7 104 292 21 224 7.33e-13 67.4
MsG0780040638.01.T01 MTR_4g114320 29.787 188 112 8 3 182 200 375 9.13e-13 68.6
MsG0780040638.01.T01 MTR_4g114320 22.680 291 187 8 16 292 118 384 2.92e-12 67.0
MsG0780040638.01.T01 MTR_4g114320 27.551 196 123 5 114 306 122 301 9.06e-12 65.5
MsG0780040638.01.T01 MTR_8g086070 28.655 171 112 5 14 182 17 179 1.24e-12 66.2
MsG0780040638.01.T01 MTR_3g074490 29.630 189 109 6 121 302 118 289 1.90e-12 67.8
MsG0780040638.01.T01 MTR_8g107270 25.397 189 127 3 120 298 22 206 3.05e-12 66.6
MsG0780040638.01.T01 MTR_8g107270 23.448 290 187 12 29 298 26 300 6.22e-12 65.9
MsG0780040638.01.T01 MTR_2g032610 25.267 281 183 11 22 284 30 301 4.07e-12 66.2
MsG0780040638.01.T01 MTR_2g098070 26.943 193 122 4 132 309 82 270 4.16e-12 66.6
MsG0780040638.01.T01 MTR_1g088995 32.192 146 89 4 36 178 48 186 4.26e-12 65.1
MsG0780040638.01.T01 MTR_1g088995 31.548 168 89 6 120 279 37 186 2.07e-11 63.2
MsG0780040638.01.T01 MTR_1g095780 27.500 280 153 10 21 286 525 768 5.24e-12 67.0
MsG0780040638.01.T01 MTR_7g015870 23.875 289 189 9 34 305 38 312 6.37e-12 65.5
MsG0780040638.01.T01 MTR_7g015870 24.345 267 176 8 35 284 35 292 9.86e-12 65.1
MsG0780040638.01.T01 MTR_3g104600 25.705 319 197 14 5 296 18 323 1.00e-11 65.1
MsG0780040638.01.T01 MTR_8g019480 24.490 294 162 10 32 280 44 322 2.13e-11 64.3
MsG0780040638.01.T01 MTR_4g016730 19.930 286 185 9 37 306 105 362 7.37e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040638.01.T01 AT5G01340 78.502 307 65 1 5 310 1 307 0.0 520
MsG0780040638.01.T01 AT1G14140 32.082 293 176 11 13 292 8 290 7.84e-29 112
MsG0780040638.01.T01 AT1G14140 28.641 206 129 5 5 200 102 299 2.86e-16 78.2
MsG0780040638.01.T01 AT3G54110 29.603 277 170 9 34 297 28 292 1.41e-28 112
MsG0780040638.01.T01 AT3G54110 35.417 192 105 7 117 298 18 200 4.83e-19 86.3
MsG0780040638.01.T01 AT3G54110 30.198 202 121 7 1 191 95 287 9.06e-15 73.9
MsG0780040638.01.T01 AT5G58970 28.713 303 183 10 22 307 17 303 3.02e-28 111
MsG0780040638.01.T01 AT5G58970 29.891 184 115 3 14 191 113 288 1.51e-14 73.2
MsG0780040638.01.T01 AT2G37890 25.868 317 195 9 5 298 29 328 2.02e-24 101
MsG0780040638.01.T01 AT1G34065 31.525 295 160 10 18 305 79 338 2.96e-24 101
MsG0780040638.01.T01 AT1G34065 31.525 295 160 10 18 305 72 331 3.03e-24 100
MsG0780040638.01.T01 AT5G66380 28.378 296 193 8 20 301 9 299 4.63e-24 100
MsG0780040638.01.T01 AT5G66380 28.125 192 126 4 11 191 100 290 1.53e-17 82.0
MsG0780040638.01.T01 AT5G66380 32.258 186 113 4 127 305 21 200 3.42e-16 78.2
MsG0780040638.01.T01 AT3G53940 27.931 290 181 9 20 292 72 350 1.89e-23 99.4
MsG0780040638.01.T01 AT3G53940 32.836 201 122 6 103 296 61 255 1.15e-16 80.1
MsG0780040638.01.T01 AT1G25380 27.536 276 188 7 37 304 37 308 2.54e-23 99.0
MsG0780040638.01.T01 AT1G25380 39.355 155 86 4 130 281 35 184 1.27e-15 77.0
MsG0780040638.01.T01 AT1G25380 27.536 276 188 7 37 304 37 308 2.54e-23 99.0
MsG0780040638.01.T01 AT1G25380 39.355 155 86 4 130 281 35 184 1.27e-15 77.0
MsG0780040638.01.T01 AT4G03115 27.797 295 191 7 15 301 28 308 1.52e-22 95.9
MsG0780040638.01.T01 AT4G03115 27.797 295 191 7 15 301 60 340 1.90e-22 96.3
MsG0780040638.01.T01 AT5G19760 27.083 288 194 9 22 304 19 295 6.28e-22 94.0
MsG0780040638.01.T01 AT4G39460 30.851 282 153 9 22 296 59 305 1.41e-21 93.6
MsG0780040638.01.T01 AT4G39460 30.851 282 153 9 22 296 59 305 1.41e-21 93.6
MsG0780040638.01.T01 AT4G39460 30.851 282 153 9 22 296 59 305 1.41e-21 93.6
MsG0780040638.01.T01 AT2G33820 24.422 303 201 8 18 301 15 308 5.69e-21 91.7
MsG0780040638.01.T01 AT5G46800 29.412 289 176 10 23 292 10 289 1.55e-20 90.1
MsG0780040638.01.T01 AT5G46800 27.536 207 124 5 97 292 1 192 4.09e-14 72.0
MsG0780040638.01.T01 AT5G46800 29.412 289 176 10 23 292 10 289 1.55e-20 90.1
MsG0780040638.01.T01 AT5G46800 27.536 207 124 5 97 292 1 192 4.09e-14 72.0
MsG0780040638.01.T01 AT5G46800 29.412 289 176 10 23 292 10 289 1.55e-20 90.1
MsG0780040638.01.T01 AT5G46800 27.536 207 124 5 97 292 1 192 4.09e-14 72.0
MsG0780040638.01.T01 AT2G47490 27.174 276 175 8 37 298 33 296 5.25e-20 89.0
MsG0780040638.01.T01 AT2G47490 35.484 155 94 2 129 281 30 180 2.93e-14 72.4
MsG0780040638.01.T01 AT4G32400 28.571 294 166 11 16 292 109 375 7.49e-20 89.4
MsG0780040638.01.T01 AT4G32400 27.041 196 138 4 12 206 199 390 3.40e-11 63.9
MsG0780040638.01.T01 AT4G32400 28.934 197 124 5 108 302 105 287 7.69e-11 62.8
MsG0780040638.01.T01 AT5G48970 24.839 310 192 8 19 292 20 324 1.21e-19 88.2
MsG0780040638.01.T01 AT5G48970 30.189 212 128 5 99 296 5 210 1.35e-17 82.4
MsG0780040638.01.T01 AT4G11440 28.369 282 176 9 21 293 330 594 1.26e-19 89.7
MsG0780040638.01.T01 AT4G11440 28.369 282 176 9 21 293 330 594 1.26e-19 89.7
MsG0780040638.01.T01 AT4G01100 25.767 326 207 10 4 298 19 340 3.08e-19 87.4
MsG0780040638.01.T01 AT4G01100 25.256 293 192 7 30 298 1 290 3.51e-19 86.3
MsG0780040638.01.T01 AT2G33820 23.492 315 197 8 18 301 15 316 4.30e-19 86.3
MsG0780040638.01.T01 AT1G07030 27.181 298 180 10 22 303 41 317 5.45e-19 86.3
MsG0780040638.01.T01 AT4G24570 26.923 312 181 9 22 298 7 306 1.27e-18 85.1
MsG0780040638.01.T01 AT4G01100 25.882 340 203 11 4 298 19 354 1.64e-18 85.5
MsG0780040638.01.T01 AT2G30160 27.213 305 174 11 22 303 43 322 1.94e-18 84.7
MsG0780040638.01.T01 AT1G79900 28.226 248 150 8 37 277 32 258 5.75e-18 82.8
MsG0780040638.01.T01 AT2G22500 26.710 307 192 9 24 303 9 309 7.70e-18 82.8
MsG0780040638.01.T01 AT2G22500 30.102 196 116 4 9 191 111 298 7.09e-13 68.6
MsG0780040638.01.T01 AT5G09470 29.150 247 165 5 59 303 95 333 1.46e-17 82.4
MsG0780040638.01.T01 AT5G09470 26.667 195 120 6 9 191 139 322 3.35e-11 63.5
MsG0780040638.01.T01 AT3G55640 31.000 200 127 5 105 298 28 222 1.78e-17 80.9
MsG0780040638.01.T01 AT3G55640 31.000 200 127 5 105 298 28 222 1.78e-17 80.9
MsG0780040638.01.T01 AT4G03115 28.333 240 157 5 63 301 12 237 2.43e-17 80.1
MsG0780040638.01.T01 AT4G03115 28.889 180 109 5 19 191 61 228 2.29e-11 63.2
MsG0780040638.01.T01 AT4G03115 28.333 240 157 5 63 301 20 245 3.05e-17 80.1
MsG0780040638.01.T01 AT4G03115 28.889 180 109 5 19 191 69 236 2.62e-11 63.2
MsG0780040638.01.T01 AT3G55640 31.000 200 127 5 105 298 28 222 4.11e-17 80.9
MsG0780040638.01.T01 AT3G55640 24.510 306 194 10 8 292 26 315 1.96e-16 79.0
MsG0780040638.01.T01 AT3G55640 31.000 200 127 5 105 298 28 222 4.11e-17 80.9
MsG0780040638.01.T01 AT3G55640 24.510 306 194 10 8 292 26 315 1.96e-16 79.0
MsG0780040638.01.T01 AT3G53940 32.836 201 122 6 103 296 61 255 4.76e-17 80.1
MsG0780040638.01.T01 AT3G53940 28.889 225 133 9 20 226 72 287 1.21e-11 64.7
MsG0780040638.01.T01 AT5G58970 27.731 238 145 9 22 242 17 244 2.35e-16 77.8
MsG0780040638.01.T01 AT5G58970 31.771 192 117 6 115 298 17 202 6.50e-16 76.6
MsG0780040638.01.T01 AT3G21390 30.366 191 118 5 128 306 31 218 2.91e-16 78.6
MsG0780040638.01.T01 AT3G21390 22.977 309 198 8 19 292 17 320 6.21e-16 77.8
MsG0780040638.01.T01 AT3G21390 30.366 191 118 5 128 306 53 240 3.07e-16 78.6
MsG0780040638.01.T01 AT3G21390 22.977 309 198 8 19 292 39 342 7.53e-16 77.4
MsG0780040638.01.T01 AT2G26360 26.642 274 165 9 21 286 115 360 4.09e-15 75.5
MsG0780040638.01.T01 AT2G17270 25.694 288 177 10 25 298 22 286 4.85e-15 74.7
MsG0780040638.01.T01 AT2G33820 28.342 187 116 7 18 192 15 195 9.10e-15 73.6
MsG0780040638.01.T01 AT5G48970 25.703 249 159 7 63 290 8 251 1.01e-14 73.2
MsG0780040638.01.T01 AT5G48970 31.206 141 93 2 157 296 2 139 3.91e-13 68.6
MsG0780040638.01.T01 AT5G42130 26.154 260 164 8 35 283 132 374 3.46e-14 73.2
MsG0780040638.01.T01 AT5G51050 25.532 282 183 9 22 294 224 487 2.02e-13 70.9
MsG0780040638.01.T01 AT1G74240 24.771 327 192 8 9 290 7 324 2.14e-13 70.5
MsG0780040638.01.T01 AT5G17400 28.324 173 118 2 132 298 30 202 3.34e-13 69.3
MsG0780040638.01.T01 AT5G17400 25.000 296 179 14 37 308 30 306 6.22e-12 65.5
MsG0780040638.01.T01 AT3G51870 23.792 269 179 8 37 298 107 356 6.35e-13 68.9
MsG0780040638.01.T01 AT4G03115 29.714 175 106 5 15 182 28 192 7.80e-13 67.4
MsG0780040638.01.T01 AT4G03115 29.714 175 106 5 15 182 28 192 1.08e-12 67.0
MsG0780040638.01.T01 AT5G15640 27.076 277 160 12 34 284 41 301 1.52e-12 67.8
MsG0780040638.01.T01 AT5G56450 23.077 312 202 11 7 291 15 315 2.45e-12 67.0
MsG0780040638.01.T01 AT5G15640 27.076 277 160 12 34 284 34 294 2.51e-12 67.0
MsG0780040638.01.T01 AT5G01500 22.794 272 184 7 37 301 135 387 4.03e-12 67.0
MsG0780040638.01.T01 AT1G74240 25.352 284 175 6 35 290 2 276 5.02e-12 65.9
MsG0780040638.01.T01 AT2G33820 25.000 192 130 5 119 301 41 227 5.13e-12 65.1
MsG0780040638.01.T01 AT4G26180 25.000 304 194 10 14 296 13 303 5.30e-12 66.2
MsG0780040638.01.T01 AT4G28390 26.733 202 124 6 113 298 78 271 5.84e-11 63.2
MsG0780040638.01.T01 AT4G28390 26.733 202 124 6 113 298 78 271 5.84e-11 63.2

Find 104 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTACTTCAGTCAGCATTTA+AGG 0.130074 7:-80450432 MsG0780040638.01.T01:CDS
AATCATGGCCGCCTTCTTTC+TGG 0.145610 7:-80450386 MsG0780040638.01.T01:CDS
CAGAAGGTGTGCGTGCTTTA+TGG 0.206798 7:-80450520 MsG0780040638.01.T01:CDS
CCATGGCAGTCGATGATTTC+AGG 0.246974 7:-80447076 MsG0780040638.01.T01:CDS
AAGAAGGAATTCTTGCATTA+TGG 0.250175 7:-80446916 MsG0780040638.01.T01:CDS
AAGAAGGCCTTCGTGGGCTT+TGG 0.284683 7:-80447219 MsG0780040638.01.T01:CDS
TGGATCCCTCGGAGGGGTTA+TGG 0.306711 7:-80450648 MsG0780040638.01.T01:CDS
GGCCGCCTTCTTTCTGGATT+CGG 0.312891 7:-80450380 MsG0780040638.01.T01:CDS
AGAAGGCCTTCGTGGGCTTT+GGG 0.321993 7:-80447218 MsG0780040638.01.T01:CDS
TAATGGGCTTACAATGGAAT+TGG 0.350294 7:+80446725 None:intergenic
GGCCTTCGTGGGCTTTGGGC+TGG 0.357457 7:-80447214 MsG0780040638.01.T01:CDS
ATGATTTCAGGATTCCTTGC+AGG 0.370955 7:-80447064 MsG0780040638.01.T01:CDS
CTTCTTTCTGGATTCGGTGC+TGG 0.375633 7:-80450374 MsG0780040638.01.T01:CDS
TCAAAGGGACCGGTGCAAAT+AGG 0.385727 7:+80447031 None:intergenic
CCTTACATGAAGGCAATCTC+TGG 0.423164 7:-80450668 MsG0780040638.01.T01:CDS
TTTGCCTTCAATATTATTCG+TGG 0.424494 7:-80446691 MsG0780040638.01.T01:three_prime_UTR
GTTCCATTACGCATTATAGT+AGG 0.429392 7:+80447184 None:intergenic
AGACCAGATTGCAGCTTGAT+AGG 0.431519 7:-80450592 MsG0780040638.01.T01:CDS
ATCAGCCACACCCCACATAA+TGG 0.435260 7:+80446850 None:intergenic
ATGTATTGAAGCTAGCTTGA+AGG 0.438854 7:-80450766 MsG0780040638.01.T01:intron
TTGACTTCGTCAGGTAGAAC+AGG 0.439226 7:-80450931 MsG0780040638.01.T01:intron
GATGTGAAAGCTACCTCAAA+TGG 0.441356 7:+80450323 None:intergenic
TTCTGCAAATATTGTTCTGA+TGG 0.442145 7:+80446937 None:intergenic
AGATTGCAGCTTGATAGGTC+TGG 0.443472 7:-80450587 MsG0780040638.01.T01:CDS
GAAAACAAGGTTGATGGCTC+AGG 0.449285 7:-80447002 MsG0780040638.01.T01:CDS
ACCTGGACAGGCCATTATGT+GGG 0.449847 7:-80446861 MsG0780040638.01.T01:CDS
TTTGAAGTATACGCTTCGTA+TGG 0.450367 7:-80450465 MsG0780040638.01.T01:CDS
TGTCATTGTCACGCCATTTG+AGG 0.457198 7:-80450336 MsG0780040638.01.T01:intron
AGAACAATATTTGCAGAAGA+AGG 0.460195 7:-80446932 MsG0780040638.01.T01:CDS
CCAGAGATTGCCTTCATGTA+AGG 0.460757 7:+80450668 None:intergenic
CTGGTCTTGATGACATCAAT+TGG 0.462673 7:+80450608 None:intergenic
GCATTTAAGGATTCTCAGAC+TGG 0.465071 7:-80450419 MsG0780040638.01.T01:CDS
GGGAGGTGAAGTGAAGTACA+AGG 0.465904 7:-80446972 MsG0780040638.01.T01:CDS
GGATTCCTTGCAGGGACAGC+AGG 0.468291 7:-80447055 MsG0780040638.01.T01:CDS
GGTGTGGCTGATCAAGTAAT+TGG 0.470028 7:-80446839 MsG0780040638.01.T01:CDS
AGACCTATCAAGCTGCAATC+TGG 0.470378 7:+80450589 None:intergenic
TAAGATTGCAGCAGCAGAAA+GGG 0.479992 7:-80447303 MsG0780040638.01.T01:CDS
AGATCCACGAATAATATTGA+AGG 0.485862 7:+80446687 None:intergenic
AGAGGTCCTGTGCATTGTGC+AGG 0.488214 7:-80447256 MsG0780040638.01.T01:CDS
CATGAGAATCCCACCTGGAC+AGG 0.489841 7:-80446873 MsG0780040638.01.T01:CDS
CTCTATATTTCAAAAGCTCA+TGG 0.493869 7:+80447275 None:intergenic
GAAAACAACACGTCGGCGCT+AGG 0.501001 7:+80450955 None:intergenic
AAAGTCAAATGTGTGGCAAA+AGG 0.503996 7:+80450485 None:intergenic
TTGTGCAGGAATGATCATAA+AGG 0.509840 7:-80447242 MsG0780040638.01.T01:CDS
GATTGCAGCTTGATAGGTCT+GGG 0.514290 7:-80450586 MsG0780040638.01.T01:CDS
CACCTGGACAGGCCATTATG+TGG 0.518059 7:-80446862 MsG0780040638.01.T01:CDS
ACTTCATGATTGTATTTGCA+TGG 0.518702 7:-80446791 MsG0780040638.01.T01:exon
ATGGTAGAGTTCTTCTACCA+TGG 0.521546 7:-80447093 MsG0780040638.01.T01:CDS
AAGTAATTGGTTTGTATGAG+AGG 0.527356 7:-80446826 MsG0780040638.01.T01:CDS
ACAATGGAATTGGTCTATTG+TGG 0.532245 7:+80446735 None:intergenic
ACAGGCCATTATGTGGGGTG+TGG 0.532932 7:-80446855 MsG0780040638.01.T01:CDS
ATCATTCCTGCACAATGCAC+AGG 0.534918 7:+80447250 None:intergenic
CACATAATGGCCTGTCCAGG+TGG 0.535007 7:+80446863 None:intergenic
CAAATATTGTTCTGATGGCA+TGG 0.535548 7:+80446942 None:intergenic
TGTAGTGAAAACAAGGTTGA+TGG 0.536248 7:-80447008 MsG0780040638.01.T01:CDS
ACTGGGAAGATTAGTAATCA+TGG 0.537012 7:-80450401 MsG0780040638.01.T01:CDS
ACTCCTACTATAATGCGTAA+TGG 0.537843 7:-80447187 MsG0780040638.01.T01:CDS
TGATTTCAGGATTCCTTGCA+GGG 0.542810 7:-80447063 MsG0780040638.01.T01:CDS
TGATAGGTCTGGGAATTACA+AGG 0.544752 7:-80450576 MsG0780040638.01.T01:CDS
GGAATTCTTGCATTATGGAA+AGG 0.546024 7:-80446911 MsG0780040638.01.T01:CDS
AGGTGTGCGTGCTTTATGGA+AGG 0.546687 7:-80450516 MsG0780040638.01.T01:CDS
TTGAAGTATACGCTTCGTAT+GGG 0.547287 7:-80450464 MsG0780040638.01.T01:CDS
ATCAATTCCACCTTACATGA+AGG 0.548601 7:-80450678 MsG0780040638.01.T01:CDS
AAGGCAATCTCTGGATCCCT+CGG 0.549310 7:-80450659 MsG0780040638.01.T01:CDS
CCCCACATAATGGCCTGTCC+AGG 0.549375 7:+80446860 None:intergenic
TTGATGGCTCAGGGTAGAGA+GGG 0.553309 7:-80446992 MsG0780040638.01.T01:CDS
CAATCTCTGGATCCCTCGGA+GGG 0.554088 7:-80450655 MsG0780040638.01.T01:CDS
ATAAGATTGCAGCAGCAGAA+AGG 0.556315 7:-80447304 MsG0780040638.01.T01:CDS
TTTCACTACATCAAAGGGAC+CGG 0.560781 7:+80447021 None:intergenic
ATAAAGGAAGAAGGCCTTCG+TGG 0.560802 7:-80447226 MsG0780040638.01.T01:CDS
GTTGATGGCTCAGGGTAGAG+AGG 0.567738 7:-80446993 MsG0780040638.01.T01:CDS
CCTTTGATGTAGTGAAAACA+AGG 0.568147 7:-80447015 MsG0780040638.01.T01:CDS
GGAATGATCATAAAGGAAGA+AGG 0.568531 7:-80447235 MsG0780040638.01.T01:CDS
GGAGGTGAAGTGAAGTACAA+GGG 0.568679 7:-80446971 MsG0780040638.01.T01:CDS
GGTGTGCGTGCTTTATGGAA+GGG 0.571912 7:-80450515 MsG0780040638.01.T01:CDS
CATTTAAGGATTCTCAGACT+GGG 0.576885 7:-80450418 MsG0780040638.01.T01:CDS
CCTGGACAGGCCATTATGTG+GGG 0.578332 7:-80446860 MsG0780040638.01.T01:CDS
CAGCACCGAATCCAGAAAGA+AGG 0.585264 7:+80450375 None:intergenic
GCCACAATTGTACGTTCAGA+AGG 0.588538 7:-80450536 MsG0780040638.01.T01:CDS
CCTGAAATCATCGACTGCCA+TGG 0.597724 7:+80447076 None:intergenic
GAGATTGCCTTCATGTAAGG+TGG 0.599416 7:+80450671 None:intergenic
TAGGACCTGCTGTCCCTGCA+AGG 0.601465 7:+80447050 None:intergenic
CGTCTCATGAGAATCCCACC+TGG 0.608607 7:-80446878 MsG0780040638.01.T01:CDS
ATTCGGTGCTGGAGTTCTTG+AGG 0.610551 7:-80450363 MsG0780040638.01.T01:CDS
AAAACAAGGTTGATGGCTCA+GGG 0.612241 7:-80447001 MsG0780040638.01.T01:CDS
CACCGAATCCAGAAAGAAGG+CGG 0.612855 7:+80450378 None:intergenic
AGCCTCCATAACCCCTCCGA+GGG 0.615195 7:+80450643 None:intergenic
ACAGCAGGTCCTATTTGCAC+CGG 0.616881 7:-80447040 MsG0780040638.01.T01:CDS
ATCCCTCGGAGGGGTTATGG+AGG 0.618572 7:-80450645 MsG0780040638.01.T01:CDS
TACAAGGGAATTGCTCATTG+TGG 0.619868 7:-80450560 MsG0780040638.01.T01:CDS
AACAACACGTCGGCGCTAGG+TGG 0.625732 7:+80450958 None:intergenic
TAAAGGAAGAAGGCCTTCGT+GGG 0.628573 7:-80447225 MsG0780040638.01.T01:CDS
ATTGAAGCTAGCTTGAAGGA+AGG 0.636741 7:-80450762 MsG0780040638.01.T01:intron
ACCTTCTGAACGTACAATTG+TGG 0.640920 7:+80450535 None:intergenic
GCAATCTCTGGATCCCTCGG+AGG 0.641330 7:-80450656 MsG0780040638.01.T01:CDS
ACATAATGGCCTGTCCAGGT+GGG 0.645441 7:+80446864 None:intergenic
ATGGCTCAGGGTAGAGAGGG+AGG 0.648106 7:-80446989 MsG0780040638.01.T01:CDS
CACCAGCCCAAAGCCCACGA+AGG 0.653420 7:+80447212 None:intergenic
GATAGGTCTGGGAATTACAA+GGG 0.663914 7:-80450575 MsG0780040638.01.T01:CDS
ATACTTCAAAGTCAAATGTG+TGG 0.666591 7:+80450478 None:intergenic
AATCTCTGGATCCCTCGGAG+GGG 0.677010 7:-80450654 MsG0780040638.01.T01:CDS
CAGCCTCCATAACCCCTCCG+AGG 0.698608 7:+80450642 None:intergenic
GGTGGGATTCTCATGAGACG+AGG 0.727268 7:+80446881 None:intergenic
AGTCAAAGAAAACAACACGT+CGG 0.730515 7:+80450948 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTAAATATATTTTAT+CGG + Chr7:80449644-80449663 None:intergenic 0.0%
!! AAAGAAAAATTTAACAAAAA+TGG + Chr7:80446787-80446806 None:intergenic 10.0%
!! AAGAAAAATTTAACAAAAAT+GGG + Chr7:80446786-80446805 None:intergenic 10.0%
!! AAGAGTTATTATATGAATTA+TGG - Chr7:80448303-80448322 MsG0780040638.01.T01:intron 15.0%
!! AGAAAAATTTAACAAAAATG+GGG + Chr7:80446785-80446804 None:intergenic 15.0%
!! AGAGTTATTATATGAATTAT+GGG - Chr7:80448304-80448323 MsG0780040638.01.T01:intron 15.0%
!! TAAAAAAAAAAAACTTTGAC+AGG - Chr7:80450069-80450088 MsG0780040638.01.T01:intron 15.0%
!! TAAAATAGAAAGTTTCAATT+GGG - Chr7:80448636-80448655 MsG0780040638.01.T01:intron 15.0%
!! TATTGAATTTAAAGGAATAT+GGG - Chr7:80447982-80448001 MsG0780040638.01.T01:intron 15.0%
!! TTAAAATAGAAAGTTTCAAT+TGG - Chr7:80448635-80448654 MsG0780040638.01.T01:intron 15.0%
!! TTCAAAAATTATATGTTGAT+GGG - Chr7:80447794-80447813 MsG0780040638.01.T01:intron 15.0%
!! TTTCAAAAATTATATGTTGA+TGG - Chr7:80447793-80447812 MsG0780040638.01.T01:intron 15.0%
!!! AATTAAAATTATGTTTTTGG+TGG + Chr7:80449484-80449503 None:intergenic 15.0%
!!! ACCAAAAACATAATTTTAAT+TGG - Chr7:80449483-80449502 MsG0780040638.01.T01:intron 15.0%
!!! ACCAATTAAAATTATGTTTT+TGG + Chr7:80449487-80449506 None:intergenic 15.0%
!!! CAACATATAATTTTTGAAAT+TGG + Chr7:80447792-80447811 None:intergenic 15.0%
!! AAAATAGAAAGTTTCAATTG+GGG - Chr7:80448637-80448656 MsG0780040638.01.T01:intron 20.0%
!! AGAAGAACTATTGAATTTAA+AGG - Chr7:80447974-80447993 MsG0780040638.01.T01:intron 20.0%
!! AGTATGGTTATATAATTAAG+AGG - Chr7:80447650-80447669 MsG0780040638.01.T01:intron 20.0%
!! AGTTATTATATGAATTATGG+GGG - Chr7:80448306-80448325 MsG0780040638.01.T01:intron 20.0%
!! ATTGAATTTAAAGGAATATG+GGG - Chr7:80447983-80448002 MsG0780040638.01.T01:intron 20.0%
!! CTATTGAATTTAAAGGAATA+TGG - Chr7:80447981-80448000 MsG0780040638.01.T01:intron 20.0%
!! GAAAAATTTAACAAAAATGG+GGG + Chr7:80446784-80446803 None:intergenic 20.0%
!! GAATAAGAATTCAAACATTA+TGG + Chr7:80450041-80450060 None:intergenic 20.0%
!! GAGTTATTATATGAATTATG+GGG - Chr7:80448305-80448324 MsG0780040638.01.T01:intron 20.0%
!! TATAATAACTCTTCTAATAC+AGG + Chr7:80448296-80448315 None:intergenic 20.0%
!!! ATTGATTTTGTCATTCAAAA+AGG + Chr7:80447477-80447496 None:intergenic 20.0%
!!! ATTTTCAGATATTTTACCTA+CGG - Chr7:80446834-80446853 MsG0780040638.01.T01:CDS 20.0%
!!! CTATTTTAACAATTGAGTTA+GGG + Chr7:80448624-80448643 None:intergenic 20.0%
!!! GCAAAAATGATGATTTTAAT+GGG + Chr7:80450938-80450957 None:intergenic 20.0%
!!! TACGCGAAATTTTTAAAATT+AGG - Chr7:80449232-80449251 MsG0780040638.01.T01:intron 20.0%
!!! TATTTTAACAATTGAGTTAG+GGG + Chr7:80448623-80448642 None:intergenic 20.0%
!!! TCTATTTTAACAATTGAGTT+AGG + Chr7:80448625-80448644 None:intergenic 20.0%
!!! TCTATTTTCATTCATATGTT+AGG - Chr7:80449431-80449450 MsG0780040638.01.T01:intron 20.0%
!!! TTTAAAATTAGGATACGATA+CGG - Chr7:80449243-80449262 MsG0780040638.01.T01:intron 20.0%
! AAAAAGTTTGATGTAGTGTT+GGG - Chr7:80447729-80447748 MsG0780040638.01.T01:intron 25.0%
! AATATGGGGATTTATTCATA+GGG - Chr7:80447997-80448016 MsG0780040638.01.T01:intron 25.0%
! ATCAATTACACATGAACAAA+AGG - Chr7:80447423-80447442 MsG0780040638.01.T01:intron 25.0%
! ATGAAATTGACAATTTGTGA+AGG - Chr7:80448129-80448148 MsG0780040638.01.T01:intron 25.0%
! ATGGTTATATAATTAAGAGG+AGG - Chr7:80447653-80447672 MsG0780040638.01.T01:intron 25.0%
! GGTTGTTTATAGCTTATTAT+TGG - Chr7:80447383-80447402 MsG0780040638.01.T01:intron 25.0%
! GTTATTATATGAATTATGGG+GGG - Chr7:80448307-80448326 MsG0780040638.01.T01:intron 25.0%
! TCCAATTAAAATGTCATTCA+GGG - Chr7:80447702-80447721 MsG0780040638.01.T01:intron 25.0%
! TGGTTATATAATTAAGAGGA+GGG - Chr7:80447654-80447673 MsG0780040638.01.T01:intron 25.0%
! TTCGAAATTGAATATGAAAG+CGG - Chr7:80449020-80449039 MsG0780040638.01.T01:intron 25.0%
!! GGCAAAAATGATGATTTTAA+TGG + Chr7:80450939-80450958 None:intergenic 25.0%
!!! AAGCACATCAAAAGTATTTT+TGG + Chr7:80450509-80450528 None:intergenic 25.0%
!!! TTTTACACTTCATTTTTTCC+AGG - Chr7:80449558-80449577 MsG0780040638.01.T01:intron 25.0%
AAGAAGGAATTCTTGCATTA+TGG - Chr7:80450728-80450747 MsG0780040638.01.T01:exon 30.0%
AAGAATAAATTCAGCTAGCT+AGG + Chr7:80449820-80449839 None:intergenic 30.0%
AAGGTATATAATACGTGCTT+GGG + Chr7:80450299-80450318 None:intergenic 30.0%
AATTAATTCCGATACTCCAT+GGG - Chr7:80449667-80449686 MsG0780040638.01.T01:intron 30.0%
AATTATGGCAGATCCTAATA+TGG - Chr7:80448496-80448515 MsG0780040638.01.T01:intron 30.0%
AATTGTCAATTTCATCCTTC+CGG + Chr7:80448124-80448143 None:intergenic 30.0%
ACTTCATGATTGTATTTGCA+TGG - Chr7:80450853-80450872 MsG0780040638.01.T01:intron 30.0%
AGAACAATATTTGCAGAAGA+AGG - Chr7:80450712-80450731 MsG0780040638.01.T01:CDS 30.0%
AGATCCACGAATAATATTGA+AGG + Chr7:80450960-80450979 None:intergenic 30.0%
ATAACCATACTCAAACTCTA+CGG + Chr7:80447641-80447660 None:intergenic 30.0%
ATACTTCAAAGTCAAATGTG+TGG + Chr7:80447169-80447188 None:intergenic 30.0%
ATATGGGGATTTATTCATAG+GGG - Chr7:80447998-80448017 MsG0780040638.01.T01:intron 30.0%
ATATTCGTAAATCTGCTTGT+AGG - Chr7:80448370-80448389 MsG0780040638.01.T01:intron 30.0%
ATCAGTTATGTAAGCATTTC+TGG - Chr7:80448669-80448688 MsG0780040638.01.T01:intron 30.0%
CAAAAAGTTTGATGTAGTGT+TGG - Chr7:80447728-80447747 MsG0780040638.01.T01:intron 30.0%
CTCCAATTAAAATGTCATTC+AGG - Chr7:80447701-80447720 MsG0780040638.01.T01:intron 30.0%
CTCTATATTTCAAAAGCTCA+TGG + Chr7:80450372-80450391 None:intergenic 30.0%
GAAATCATATCCCAATATCT+TGG + Chr7:80449003-80449022 None:intergenic 30.0%
GAATATGGGGATTTATTCAT+AGG - Chr7:80447996-80448015 MsG0780040638.01.T01:intron 30.0%
GAATTATTATTTCCCAGATG+AGG + Chr7:80449949-80449968 None:intergenic 30.0%
GGAGGGGAATTAAAAATATT+TGG - Chr7:80448403-80448422 MsG0780040638.01.T01:intron 30.0%
GTGTACACTTGTACATAAAT+GGG - Chr7:80448925-80448944 MsG0780040638.01.T01:intron 30.0%
TAAATAGCCACACAATCTAA+TGG + Chr7:80450226-80450245 None:intergenic 30.0%
TAATTAATTCCGATACTCCA+TGG - Chr7:80449666-80449685 MsG0780040638.01.T01:intron 30.0%
TCGTAAAAACAACATTCCTA+TGG - Chr7:80447499-80447518 MsG0780040638.01.T01:intron 30.0%
TGAATTTATTCTTCCCCATT+GGG - Chr7:80449827-80449846 MsG0780040638.01.T01:intron 30.0%
TGTACACTTGTACATAAATG+GGG - Chr7:80448926-80448945 MsG0780040638.01.T01:intron 30.0%
TGTGTACACTTGTACATAAA+TGG - Chr7:80448924-80448943 MsG0780040638.01.T01:intron 30.0%
TTCATAGGTTTGTGGTATAA+GGG - Chr7:80449761-80449780 MsG0780040638.01.T01:intron 30.0%
TTCTGCAAATATTGTTCTGA+TGG + Chr7:80450710-80450729 None:intergenic 30.0%
TTGATTTATCAGAGAAAGTG+TGG + Chr7:80448832-80448851 None:intergenic 30.0%
TTTGCCTTCAATATTATTCG+TGG - Chr7:80450953-80450972 MsG0780040638.01.T01:five_prime_UTR 30.0%
! AAGTTGGATTAGGATGAAAA+AGG - Chr7:80448345-80448364 MsG0780040638.01.T01:intron 30.0%
! ATACTTTTGATGTGCTTTTG+TGG - Chr7:80450512-80450531 MsG0780040638.01.T01:CDS 30.0%
! CTTTTGTGGAAGAAAAATGA+AGG - Chr7:80450526-80450545 MsG0780040638.01.T01:CDS 30.0%
! GATGATTGTATTTTGCGAAA+TGG - Chr7:80447939-80447958 MsG0780040638.01.T01:intron 30.0%
! TAATTGGTGTCCAAGATATT+GGG - Chr7:80448990-80449009 MsG0780040638.01.T01:intron 30.0%
! TATTTTACCTACGGAATTCA+AGG - Chr7:80446843-80446862 MsG0780040638.01.T01:CDS 30.0%
! TATTTTGCGAAATGGAATAG+AGG - Chr7:80447947-80447966 MsG0780040638.01.T01:intron 30.0%
! TTTTTCATCCTAATCCAACT+TGG + Chr7:80448346-80448365 None:intergenic 30.0%
!! AAGTAATTGGTTTGTATGAG+AGG - Chr7:80450818-80450837 MsG0780040638.01.T01:intron 30.0%
!! ACCCTGAATGACATTTTAAT+TGG + Chr7:80447706-80447725 None:intergenic 30.0%
!! CTTGTTTTCACTACATCAAA+GGG + Chr7:80450631-80450650 None:intergenic 30.0%
!! TTTTTCAGCAGAAGGAATTA+TGG - Chr7:80448481-80448500 MsG0780040638.01.T01:intron 30.0%
!!! ATAGGAATGTTGTTTTTACG+AGG + Chr7:80447500-80447519 None:intergenic 30.0%
!!! CATGAGCTTTTGAAATATAG+AGG - Chr7:80450370-80450389 MsG0780040638.01.T01:CDS 30.0%
!!! CTGAATGACATTTTAATTGG+AGG + Chr7:80447703-80447722 None:intergenic 30.0%
!!! CTTGGTATTTTGAGATTGAT+AGG - Chr7:80448566-80448585 MsG0780040638.01.T01:intron 30.0%
!!! TATATACCTTGTTTTTCTGC+AGG - Chr7:80450309-80450328 MsG0780040638.01.T01:intron 30.0%
!!! TGATTTTAATGGGCTTACAA+TGG + Chr7:80450928-80450947 None:intergenic 30.0%
AAAGTCAAATGTGTGGCAAA+AGG + Chr7:80447162-80447181 None:intergenic 35.0%
AAATTTCGCATACCCAACAA+TGG + Chr7:80448721-80448740 None:intergenic 35.0%
AACTCTTCTAATACAGGAAC+AGG + Chr7:80448290-80448309 None:intergenic 35.0%
ACCTTCTACATAGAGTTCAA+AGG + Chr7:80447530-80447549 None:intergenic 35.0%
ACTCCTACTATAATGCGTAA+TGG - Chr7:80450457-80450476 MsG0780040638.01.T01:CDS 35.0%
ACTCTTCTAATACAGGAACA+GGG + Chr7:80448289-80448308 None:intergenic 35.0%
ACTGGGAAGATTAGTAATCA+TGG - Chr7:80447243-80447262 MsG0780040638.01.T01:CDS 35.0%
AGTACTTCAGTCAGCATTTA+AGG - Chr7:80447212-80447231 MsG0780040638.01.T01:CDS 35.0%
AGTCAAAGAAAACAACACGT+CGG + Chr7:80446699-80446718 None:intergenic 35.0%
ATAAATTCAGCTAGCTAGGA+AGG + Chr7:80449816-80449835 None:intergenic 35.0%
ATCAATTCCACCTTACATGA+AGG - Chr7:80446966-80446985 MsG0780040638.01.T01:CDS 35.0%
ATGGGTACAAGTAAATGATC+AGG - Chr7:80447812-80447831 MsG0780040638.01.T01:intron 35.0%
ATGTAAGGAATCAACAGTTC+AGG + Chr7:80447868-80447887 None:intergenic 35.0%
ATTCCTTACATGCATGATGA+AGG - Chr7:80447877-80447896 MsG0780040638.01.T01:intron 35.0%
ATTCCTTCTGCTGAAAAACA+TGG + Chr7:80448479-80448498 None:intergenic 35.0%
CAAATATTGTTCTGATGGCA+TGG + Chr7:80450705-80450724 None:intergenic 35.0%
CAAGGTATATAATACGTGCT+TGG + Chr7:80450300-80450319 None:intergenic 35.0%
CATTTAAGGATTCTCAGACT+GGG - Chr7:80447226-80447245 MsG0780040638.01.T01:CDS 35.0%
CCTTCTACATAGAGTTCAAA+GGG + Chr7:80447529-80447548 None:intergenic 35.0%
CCTTTGATGTAGTGAAAACA+AGG - Chr7:80450629-80450648 MsG0780040638.01.T01:CDS 35.0%
CTAATCCAACTTGGAGAATT+AGG + Chr7:80448337-80448356 None:intergenic 35.0%
CTGAATTTATTCTTCCCCAT+TGG - Chr7:80449826-80449845 MsG0780040638.01.T01:intron 35.0%
CTTCATAGGTTTGTGGTATA+AGG - Chr7:80449760-80449779 MsG0780040638.01.T01:intron 35.0%
GATACTGGTACGATATGATA+CGG - Chr7:80449208-80449227 MsG0780040638.01.T01:intron 35.0%
GATGACAGATTTCCATTGTT+GGG - Chr7:80448706-80448725 MsG0780040638.01.T01:intron 35.0%
GCAAAATCCATTAGATTGTG+TGG - Chr7:80450216-80450235 MsG0780040638.01.T01:intron 35.0%
GGAATGATCATAAAGGAAGA+AGG - Chr7:80450409-80450428 MsG0780040638.01.T01:CDS 35.0%
GGAATTCTTGCATTATGGAA+AGG - Chr7:80450733-80450752 MsG0780040638.01.T01:exon 35.0%
GTACACTTGTACATAAATGG+GGG - Chr7:80448927-80448946 MsG0780040638.01.T01:intron 35.0%
GTGGGAAACACAATTGTTAA+GGG - Chr7:80449102-80449121 MsG0780040638.01.T01:intron 35.0%
GTGTGGCTAATAAAAGCTAT+TGG + Chr7:80448815-80448834 None:intergenic 35.0%
GTTCCATTACGCATTATAGT+AGG + Chr7:80450463-80450482 None:intergenic 35.0%
GTTTACCTAATTCTCCAAGT+TGG - Chr7:80448329-80448348 MsG0780040638.01.T01:intron 35.0%
TAATATGGTGAAGGCAATCA+AGG - Chr7:80448511-80448530 MsG0780040638.01.T01:intron 35.0%
TATCATATCGTACCAGTATC+CGG + Chr7:80449208-80449227 None:intergenic 35.0%
TCAACAGTTCAGGATAAAAG+TGG + Chr7:80447858-80447877 None:intergenic 35.0%
TGATGACAGATTTCCATTGT+TGG - Chr7:80448705-80448724 MsG0780040638.01.T01:intron 35.0%
TGGAAGAAAAATGAAGGAGA+TGG - Chr7:80450532-80450551 MsG0780040638.01.T01:CDS 35.0%
TGTAGTGAAAACAAGGTTGA+TGG - Chr7:80450636-80450655 MsG0780040638.01.T01:CDS 35.0%
TGTCATTCAAAAAGGTCTAG+CGG + Chr7:80447469-80447488 None:intergenic 35.0%
TTCCTTCTGCTGAAAAACAT+GGG + Chr7:80448478-80448497 None:intergenic 35.0%
TTGAAGTATACGCTTCGTAT+GGG - Chr7:80447180-80447199 MsG0780040638.01.T01:CDS 35.0%
TTGATTGCCTTCACCATATT+AGG + Chr7:80448512-80448531 None:intergenic 35.0%
TTGGAGTGAACAACAGTAAT+TGG - Chr7:80448974-80448993 MsG0780040638.01.T01:intron 35.0%
TTGTGCAGGAATGATCATAA+AGG - Chr7:80450402-80450421 MsG0780040638.01.T01:CDS 35.0%
TTTGTGGTATAAGGGAATAG+TGG - Chr7:80449769-80449788 MsG0780040638.01.T01:intron 35.0%
! ACAATGGAATTGGTCTATTG+TGG + Chr7:80450912-80450931 None:intergenic 35.0%
! ATGTATTGAAGCTAGCTTGA+AGG - Chr7:80446878-80446897 MsG0780040638.01.T01:CDS 35.0%
! CTAATTCTCCAAGTTGGATT+AGG - Chr7:80448335-80448354 MsG0780040638.01.T01:intron 35.0%
! GTAATTGGTGTCCAAGATAT+TGG - Chr7:80448989-80449008 MsG0780040638.01.T01:intron 35.0%
! TTTGAAGTATACGCTTCGTA+TGG - Chr7:80447179-80447198 MsG0780040638.01.T01:CDS 35.0%
!! CTAGCGAGCTACTTATTTTT+CGG - Chr7:80450192-80450211 MsG0780040638.01.T01:intron 35.0%
!! CTTTCTAGGGAAAAGAGTTT+TGG - Chr7:80448955-80448974 MsG0780040638.01.T01:intron 35.0%
!! TAATGGGCTTACAATGGAAT+TGG + Chr7:80450922-80450941 None:intergenic 35.0%
!! TGCTAGTGTTGTTTAATGCA+CGG + Chr7:80448245-80448264 None:intergenic 35.0%
!! TTGTTTTCTTTGACTTCGTC+AGG - Chr7:80446704-80446723 MsG0780040638.01.T01:three_prime_UTR 35.0%
!!! ATGTTTTGACCTTGCAACTA+TGG - Chr7:80448043-80448062 MsG0780040638.01.T01:intron 35.0%
!!! CCTTGTTTTCACTACATCAA+AGG + Chr7:80450632-80450651 None:intergenic 35.0%
ACAAGTAAATGATCAGGTGG+TGG - Chr7:80447818-80447837 MsG0780040638.01.T01:intron 40.0%
ACCTTAGAAAAGGAGAAACC+TGG + Chr7:80449166-80449185 None:intergenic 40.0%
ACCTTCTGAACGTACAATTG+TGG + Chr7:80447112-80447131 None:intergenic 40.0%
ACTCCTTCATCATGCATGTA+AGG + Chr7:80447883-80447902 None:intergenic 40.0%
AGCTGATGCTTTGTCTAGAA+TGG - Chr7:80449058-80449077 MsG0780040638.01.T01:intron 40.0%
ATAACAGTATGGCTTGAGAC+GGG + Chr7:80448089-80448108 None:intergenic 40.0%
ATAAGATTGCAGCAGCAGAA+AGG - Chr7:80450340-80450359 MsG0780040638.01.T01:CDS 40.0%
ATAGATCCAAATGCTCATCC+AGG - Chr7:80449145-80449164 MsG0780040638.01.T01:intron 40.0%
ATCATATCGTACCAGTATCC+GGG + Chr7:80449207-80449226 None:intergenic 40.0%
ATGAAATTGTCCACCCAATG+GGG + Chr7:80449843-80449862 None:intergenic 40.0%
ATGATTTCAGGATTCCTTGC+AGG - Chr7:80450580-80450599 MsG0780040638.01.T01:CDS 40.0%
ATGCAATGCAATGCAATCAC+TGG - Chr7:80447362-80447381 MsG0780040638.01.T01:intron 40.0%
ATGGTAGAGTTCTTCTACCA+TGG - Chr7:80450551-80450570 MsG0780040638.01.T01:CDS 40.0%
ATTTATTCTTCCCCATTGGG+TGG - Chr7:80449830-80449849 MsG0780040638.01.T01:intron 40.0%
CACAACACTAAAGGCTTTCT+TGG - Chr7:80448548-80448567 MsG0780040638.01.T01:intron 40.0%
CACATGAACAAAAGGTAAGC+AGG - Chr7:80447431-80447450 MsG0780040638.01.T01:intron 40.0%
CCACAAACACACCTTAGAAA+AGG + Chr7:80449176-80449195 None:intergenic 40.0%
CCCTTTGAACTCTATGTAGA+AGG - Chr7:80447526-80447545 MsG0780040638.01.T01:intron 40.0%
CCTATTGCTCACAACACTAA+AGG - Chr7:80448539-80448558 MsG0780040638.01.T01:intron 40.0%
CCTTTAGTGTTGTGAGCAAT+AGG + Chr7:80448542-80448561 None:intergenic 40.0%
CTGCTTGTAGGTTAGATGAT+GGG - Chr7:80448382-80448401 MsG0780040638.01.T01:intron 40.0%
CTGGGAAACAATGTTAAGGT+GGG - Chr7:80449084-80449103 MsG0780040638.01.T01:intron 40.0%
CTTGCAACTATGGTCATAGA+GGG - Chr7:80448053-80448072 MsG0780040638.01.T01:intron 40.0%
GATAACAGTATGGCTTGAGA+CGG + Chr7:80448090-80448109 None:intergenic 40.0%
GATAGGTCTGGGAATTACAA+GGG - Chr7:80447069-80447088 MsG0780040638.01.T01:CDS 40.0%
GATCTATTGTCAGAGCATGT+AGG + Chr7:80449132-80449151 None:intergenic 40.0%
GATGAAATTGTCCACCCAAT+GGG + Chr7:80449844-80449863 None:intergenic 40.0%
GATGTGAAAGCTACCTCAAA+TGG + Chr7:80447324-80447343 None:intergenic 40.0%
GCAAGGTCAAAACATCTTTG+TGG + Chr7:80448038-80448057 None:intergenic 40.0%
GCAGTGTCAGTATTAGATTG+AGG - Chr7:80449874-80449893 MsG0780040638.01.T01:intron 40.0%
GCATTTAAGGATTCTCAGAC+TGG - Chr7:80447225-80447244 MsG0780040638.01.T01:CDS 40.0%
GGATGAAAATAACGAGAGAG+AGG + Chr7:80449463-80449482 None:intergenic 40.0%
GGTACAAGTAAATGATCAGG+TGG - Chr7:80447815-80447834 MsG0780040638.01.T01:intron 40.0%
GGTGGACAATTTCATCGTAA+GGG - Chr7:80449848-80449867 MsG0780040638.01.T01:intron 40.0%
GGTGGGAAACACAATTGTTA+AGG - Chr7:80449101-80449120 MsG0780040638.01.T01:intron 40.0%
GTAGCTGGGAAACAATGTTA+AGG - Chr7:80449080-80449099 MsG0780040638.01.T01:intron 40.0%
GTGAAGGATATGTTAGCAGT+TGG - Chr7:80448145-80448164 MsG0780040638.01.T01:intron 40.0%
GTGGACAATTTCATCGTAAG+GGG - Chr7:80449849-80449868 MsG0780040638.01.T01:intron 40.0%
TAAGATTGCAGCAGCAGAAA+GGG - Chr7:80450341-80450360 MsG0780040638.01.T01:CDS 40.0%
TACAAGGGAATTGCTCATTG+TGG - Chr7:80447084-80447103 MsG0780040638.01.T01:CDS 40.0%
TACTTCACAAAGACGTATCC+TGG + Chr7:80449579-80449598 None:intergenic 40.0%
TATGCCGTAGAGTTTGAGTA+TGG - Chr7:80447634-80447653 MsG0780040638.01.T01:intron 40.0%
TCGATATCCTTGAATTCCGT+AGG + Chr7:80446853-80446872 None:intergenic 40.0%
TCTGCTTGTAGGTTAGATGA+TGG - Chr7:80448381-80448400 MsG0780040638.01.T01:intron 40.0%
TGATAGGTCTGGGAATTACA+AGG - Chr7:80447068-80447087 MsG0780040638.01.T01:CDS 40.0%
TGATTTCAGGATTCCTTGCA+GGG - Chr7:80450581-80450600 MsG0780040638.01.T01:CDS 40.0%
TGGTGTAAAGACTTACGCTA+GGG + Chr7:80448177-80448196 None:intergenic 40.0%
TTATTTCCCAGATGAGGCTT+AGG + Chr7:80449943-80449962 None:intergenic 40.0%
TTGAAACTGATGCACAGTAC+AGG - Chr7:80448758-80448777 MsG0780040638.01.T01:intron 40.0%
TTGGTGTAAAGACTTACGCT+AGG + Chr7:80448178-80448197 None:intergenic 40.0%
TTTCACTACATCAAAGGGAC+CGG + Chr7:80450626-80450645 None:intergenic 40.0%
! ATATTTGGAACACTACGCAC+TGG - Chr7:80448418-80448437 MsG0780040638.01.T01:intron 40.0%
! ATCCATGCATAGTTTGTCCT+TGG - Chr7:80450264-80450283 MsG0780040638.01.T01:intron 40.0%
! ATTGAAGCTAGCTTGAAGGA+AGG - Chr7:80446882-80446901 MsG0780040638.01.T01:CDS 40.0%
! CTTTGTCTAGAATGGTAGCT+GGG - Chr7:80449066-80449085 MsG0780040638.01.T01:intron 40.0%
! TAGCTAGGAAGGAACTTTTG+AGG + Chr7:80449805-80449824 None:intergenic 40.0%
! TCCAGGTTTCTCCTTTTCTA+AGG - Chr7:80449162-80449181 MsG0780040638.01.T01:intron 40.0%
! TGATGCACAGTACAGGTTTT+GGG - Chr7:80448765-80448784 MsG0780040638.01.T01:intron 40.0%
!! AAAACAAGGTTGATGGCTCA+GGG - Chr7:80450643-80450662 MsG0780040638.01.T01:CDS 40.0%
!! AGTGTTGTTTAATGCACGGT+AGG + Chr7:80448241-80448260 None:intergenic 40.0%
!! ATGATCAGGTGGTGGAAATT+AGG - Chr7:80447826-80447845 MsG0780040638.01.T01:intron 40.0%
!! CTGGTCTTGATGACATCAAT+TGG + Chr7:80447039-80447058 None:intergenic 40.0%
!! TTGTAGGTTAGATGATGGGA+GGG - Chr7:80448386-80448405 MsG0780040638.01.T01:intron 40.0%
!!! ATACCTTGTTTTTCTGCAGG+TGG - Chr7:80450312-80450331 MsG0780040638.01.T01:intron 40.0%
!!! CCTTTTCTAAGGTGTGTTTG+TGG - Chr7:80449173-80449192 MsG0780040638.01.T01:intron 40.0%
!!! CTACGCACTGGTTATAGTTT+TGG - Chr7:80448430-80448449 MsG0780040638.01.T01:intron 40.0%
AAATGGAGACGTACCCGTAT+CGG + Chr7:80449727-80449746 None:intergenic 45.0%
AAATGGGGGCAGTACTTTCT+AGG - Chr7:80448941-80448960 MsG0780040638.01.T01:intron 45.0%
AATGGGGGCAGTACTTTCTA+GGG - Chr7:80448942-80448961 MsG0780040638.01.T01:intron 45.0%
AGACCAGATTGCAGCTTGAT+AGG - Chr7:80447052-80447071 MsG0780040638.01.T01:CDS 45.0%
AGACCTATCAAGCTGCAATC+TGG + Chr7:80447058-80447077 None:intergenic 45.0%
AGATTGCAGCTTGATAGGTC+TGG - Chr7:80447057-80447076 MsG0780040638.01.T01:CDS 45.0%
AGCACATTTCAACCCGTAAC+AGG - Chr7:80448261-80448280 MsG0780040638.01.T01:intron 45.0%
ATAAAGGAAGAAGGCCTTCG+TGG - Chr7:80450418-80450437 MsG0780040638.01.T01:CDS 45.0%
ATCATTCCTGCACAATGCAC+AGG + Chr7:80450397-80450416 None:intergenic 45.0%
ATCCAGGCTTCATAGGTTTG+TGG - Chr7:80449753-80449772 MsG0780040638.01.T01:intron 45.0%
CCAGAGATTGCCTTCATGTA+AGG + Chr7:80446979-80446998 None:intergenic 45.0%
CCTCTATGACCATAGTTGCA+AGG + Chr7:80448055-80448074 None:intergenic 45.0%
CCTTACATGAAGGCAATCTC+TGG - Chr7:80446976-80446995 MsG0780040638.01.T01:CDS 45.0%
CCTTGCAACTATGGTCATAG+AGG - Chr7:80448052-80448071 MsG0780040638.01.T01:intron 45.0%
CGATGAAATTGTCCACCCAA+TGG + Chr7:80449845-80449864 None:intergenic 45.0%
CTCGCTAGTGCAATCACTTT+AGG + Chr7:80450180-80450199 None:intergenic 45.0%
GAAGCCTGGATACTCCAAAA+TGG + Chr7:80449744-80449763 None:intergenic 45.0%
GAGAAACCTGGATGAGCATT+TGG + Chr7:80449154-80449173 None:intergenic 45.0%
GAGATTGCCTTCATGTAAGG+TGG + Chr7:80446976-80446995 None:intergenic 45.0%
GAGTATCCTAAGCCTCATCT+GGG - Chr7:80449934-80449953 MsG0780040638.01.T01:intron 45.0%
GAGTTCAAAGGGTCATCCAT+AGG + Chr7:80447518-80447537 None:intergenic 45.0%
GATACGTACCCATGGAGTAT+CGG + Chr7:80449678-80449697 None:intergenic 45.0%
GATGAAGGAGTTGTGAAGAG+AGG - Chr7:80447892-80447911 MsG0780040638.01.T01:intron 45.0%
GATTGCAGCTTGATAGGTCT+GGG - Chr7:80447058-80447077 MsG0780040638.01.T01:CDS 45.0%
GCCACAATTGTACGTTCAGA+AGG - Chr7:80447108-80447127 MsG0780040638.01.T01:CDS 45.0%
GCTGGGAAACAATGTTAAGG+TGG - Chr7:80449083-80449102 MsG0780040638.01.T01:intron 45.0%
GGAGGTGAAGTGAAGTACAA+GGG - Chr7:80450673-80450692 MsG0780040638.01.T01:CDS 45.0%
GGCAGATCCTAATATGGTGA+AGG - Chr7:80448502-80448521 MsG0780040638.01.T01:intron 45.0%
GGGTGGACAATTTCATCGTA+AGG - Chr7:80449847-80449866 MsG0780040638.01.T01:intron 45.0%
GGTGTGGCTGATCAAGTAAT+TGG - Chr7:80450805-80450824 MsG0780040638.01.T01:intron 45.0%
TAAAGGAAGAAGGCCTTCGT+GGG - Chr7:80450419-80450438 MsG0780040638.01.T01:CDS 45.0%
TACCACAAACCTATGAAGCC+TGG + Chr7:80449758-80449777 None:intergenic 45.0%
TCACCACCTGCAGAAAAACA+AGG + Chr7:80450318-80450337 None:intergenic 45.0%
TGCCAAGGACAAACTATGCA+TGG + Chr7:80450269-80450288 None:intergenic 45.0%
TGTCAATTTCATCCTTCCGG+TGG + Chr7:80448121-80448140 None:intergenic 45.0%
TGTCATTGTCACGCCATTTG+AGG - Chr7:80447308-80447327 MsG0780040638.01.T01:CDS 45.0%
TTGACTTCGTCAGGTAGAAC+AGG - Chr7:80446713-80446732 MsG0780040638.01.T01:three_prime_UTR 45.0%
! AAAGCCTTATCCCACGAAGT+GGG - Chr7:80449992-80450011 MsG0780040638.01.T01:intron 45.0%
! AGAGTATCCTAAGCCTCATC+TGG - Chr7:80449933-80449952 MsG0780040638.01.T01:intron 45.0%
! ATACGGGTACGTCTCCATTT+TGG - Chr7:80449727-80449746 MsG0780040638.01.T01:intron 45.0%
! CATAGTTTGTCCTTGGCATG+TGG - Chr7:80450271-80450290 MsG0780040638.01.T01:intron 45.0%
! CTGATGCACAGTACAGGTTT+TGG - Chr7:80448764-80448783 MsG0780040638.01.T01:intron 45.0%
! GATGCACAGTACAGGTTTTG+GGG - Chr7:80448766-80448785 MsG0780040638.01.T01:intron 45.0%
! GCTTTGTCTAGAATGGTAGC+TGG - Chr7:80449065-80449084 MsG0780040638.01.T01:intron 45.0%
! TGTAGTGTTGGGCTATGAGT+AGG - Chr7:80447740-80447759 MsG0780040638.01.T01:intron 45.0%
! TTGGAGTATCCAGGCTTCAT+AGG - Chr7:80449746-80449765 MsG0780040638.01.T01:intron 45.0%
!! CTTGTAGGTTAGATGATGGG+AGG - Chr7:80448385-80448404 MsG0780040638.01.T01:intron 45.0%
!! GAAAACAAGGTTGATGGCTC+AGG - Chr7:80450642-80450661 MsG0780040638.01.T01:CDS 45.0%
!! GCATACTCTAAAGTCCCTTC+GGG + Chr7:80447619-80447638 None:intergenic 45.0%
!! GGCATACTCTAAAGTCCCTT+CGG + Chr7:80447620-80447639 None:intergenic 45.0%
!! TGCCCATGTTTTTCAGCAGA+AGG - Chr7:80448473-80448492 MsG0780040638.01.T01:intron 45.0%
!! TGTAGGTTAGATGATGGGAG+GGG - Chr7:80448387-80448406 MsG0780040638.01.T01:intron 45.0%
!!! GTCTCCATTTTGGAGTATCC+AGG - Chr7:80449737-80449756 MsG0780040638.01.T01:intron 45.0%
!! TCTAATTTAAATTAATTAAT+TGG + Chr7:80448197-80448216 None:intergenic 5.0%
AAGGCAATCTCTGGATCCCT+CGG - Chr7:80446985-80447004 MsG0780040638.01.T01:CDS 50.0%
AATCATGGCCGCCTTCTTTC+TGG - Chr7:80447258-80447277 MsG0780040638.01.T01:CDS 50.0%
ACAGCAGGTCCTATTTGCAC+CGG - Chr7:80450604-80450623 MsG0780040638.01.T01:CDS 50.0%
ACATAATGGCCTGTCCAGGT+GGG + Chr7:80450783-80450802 None:intergenic 50.0%
ACCTGGACAGGCCATTATGT+GGG - Chr7:80450783-80450802 MsG0780040638.01.T01:intron 50.0%
AGGAACAGGGAACCTGTTAC+GGG + Chr7:80448276-80448295 None:intergenic 50.0%
AGGTGTGCGTGCTTTATGGA+AGG - Chr7:80447128-80447147 MsG0780040638.01.T01:CDS 50.0%
ATCAGCCACACCCCACATAA+TGG + Chr7:80450797-80450816 None:intergenic 50.0%
ATTTCATCCTTCCGGTGGTG+TGG + Chr7:80448116-80448135 None:intergenic 50.0%
CACCGAATCCAGAAAGAAGG+CGG + Chr7:80447269-80447288 None:intergenic 50.0%
CAGGAACAGGGAACCTGTTA+CGG + Chr7:80448277-80448296 None:intergenic 50.0%
CCATGGCAGTCGATGATTTC+AGG - Chr7:80450568-80450587 MsG0780040638.01.T01:CDS 50.0%
GAGTTGTGAAGAGAGGCTAC+AGG - Chr7:80447899-80447918 MsG0780040638.01.T01:intron 50.0%
GGGAGGTGAAGTGAAGTACA+AGG - Chr7:80450672-80450691 MsG0780040638.01.T01:CDS 50.0%
GGGGTTGTTCTGATGCAACA+GGG - Chr7:80448785-80448804 MsG0780040638.01.T01:intron 50.0%
GGGTTGTTCTGATGCAACAG+GGG - Chr7:80448786-80448805 MsG0780040638.01.T01:intron 50.0%
GGTGTGCGTGCTTTATGGAA+GGG - Chr7:80447129-80447148 MsG0780040638.01.T01:CDS 50.0%
GGTGTGGGTGGATAACAGTA+TGG + Chr7:80448100-80448119 None:intergenic 50.0%
GTGTTTGTGGCTATGAAGCC+CGG - Chr7:80449186-80449205 MsG0780040638.01.T01:intron 50.0%
TACTCTCGGATACGTACCCA+TGG + Chr7:80449686-80449705 None:intergenic 50.0%
TATCGGATACCGATACTCCG+CGG + Chr7:80449710-80449729 None:intergenic 50.0%
TCAAAGGGACCGGTGCAAAT+AGG + Chr7:80450616-80450635 None:intergenic 50.0%
TGGGGTTGTTCTGATGCAAC+AGG - Chr7:80448784-80448803 MsG0780040638.01.T01:intron 50.0%
TTGGGCTATGAGTAGGTGGA+GGG - Chr7:80447747-80447766 MsG0780040638.01.T01:intron 50.0%
TTTCATCCTTCCGGTGGTGT+GGG + Chr7:80448115-80448134 None:intergenic 50.0%
! AGTGTTGGGCTATGAGTAGG+TGG - Chr7:80447743-80447762 MsG0780040638.01.T01:intron 50.0%
! CAAAGCCTTATCCCACGAAG+TGG - Chr7:80449991-80450010 MsG0780040638.01.T01:intron 50.0%
! CAGAAGGTGTGCGTGCTTTA+TGG - Chr7:80447124-80447143 MsG0780040638.01.T01:CDS 50.0%
! CAGCACCGAATCCAGAAAGA+AGG + Chr7:80447272-80447291 None:intergenic 50.0%
! CCTGAAATCATCGACTGCCA+TGG + Chr7:80450571-80450590 None:intergenic 50.0%
! TTGATGGCTCAGGGTAGAGA+GGG - Chr7:80450652-80450671 MsG0780040638.01.T01:CDS 50.0%
!! ATTCGGTGCTGGAGTTCTTG+AGG - Chr7:80447281-80447300 MsG0780040638.01.T01:CDS 50.0%
!! CGGAGTATCGGTATCCGATA+CGG - Chr7:80449710-80449729 MsG0780040638.01.T01:intron 50.0%
!! CTTCTTTCTGGATTCGGTGC+TGG - Chr7:80447270-80447289 MsG0780040638.01.T01:CDS 50.0%
!! GGAGTATCGGTATCCGATAC+GGG - Chr7:80449711-80449730 MsG0780040638.01.T01:intron 50.0%
!! TACGTATCCGAGAGTATCCG+CGG - Chr7:80449690-80449709 MsG0780040638.01.T01:intron 50.0%
!! TACTCTAAAGTCCCTTCGGG+AGG + Chr7:80447616-80447635 None:intergenic 50.0%
AAGAAGGCCTTCGTGGGCTT+TGG - Chr7:80450425-80450444 MsG0780040638.01.T01:CDS 55.0%
AATCTCTGGATCCCTCGGAG+GGG - Chr7:80446990-80447009 MsG0780040638.01.T01:CDS 55.0%
ACAGGCCATTATGTGGGGTG+TGG - Chr7:80450789-80450808 MsG0780040638.01.T01:intron 55.0%
ACGTAGCCAACCCACTTCGT+GGG + Chr7:80450005-80450024 None:intergenic 55.0%
AGAAGGCCTTCGTGGGCTTT+GGG - Chr7:80450426-80450445 MsG0780040638.01.T01:CDS 55.0%
AGAGGTCCTGTGCATTGTGC+AGG - Chr7:80450388-80450407 MsG0780040638.01.T01:CDS 55.0%
CAATCTCTGGATCCCTCGGA+GGG - Chr7:80446989-80447008 MsG0780040638.01.T01:CDS 55.0%
CACATAATGGCCTGTCCAGG+TGG + Chr7:80450784-80450803 None:intergenic 55.0%
CACCTGGACAGGCCATTATG+TGG - Chr7:80450782-80450801 MsG0780040638.01.T01:intron 55.0%
CATGAGAATCCCACCTGGAC+AGG - Chr7:80450771-80450790 MsG0780040638.01.T01:intron 55.0%
CCAACCCACTTCGTGGGATA+AGG + Chr7:80449999-80450018 None:intergenic 55.0%
CCTGGACAGGCCATTATGTG+GGG - Chr7:80450784-80450803 MsG0780040638.01.T01:intron 55.0%
CCTTATCCCACGAAGTGGGT+TGG - Chr7:80449996-80450015 MsG0780040638.01.T01:intron 55.0%
CGATACTCCGCGGATACTCT+CGG + Chr7:80449700-80449719 None:intergenic 55.0%
CGTCTCATGAGAATCCCACC+TGG - Chr7:80450766-80450785 MsG0780040638.01.T01:intron 55.0%
CTGTTATCCACCCACACCAC+CGG - Chr7:80448102-80448121 MsG0780040638.01.T01:intron 55.0%
GAAAACAACACGTCGGCGCT+AGG + Chr7:80446692-80446711 None:intergenic 55.0%
GGCCGCCTTCTTTCTGGATT+CGG - Chr7:80447264-80447283 MsG0780040638.01.T01:CDS 55.0%
GGTGGGATTCTCATGAGACG+AGG + Chr7:80450766-80450785 None:intergenic 55.0%
GTTGGGCTATGAGTAGGTGG+AGG - Chr7:80447746-80447765 MsG0780040638.01.T01:intron 55.0%
TATGAGTAGGTGGAGGGGGT+AGG - Chr7:80447753-80447772 MsG0780040638.01.T01:intron 55.0%
TGCTTGGGTTCCACATGCCA+AGG + Chr7:80450284-80450303 None:intergenic 55.0%
TGGCTATGAAGCCCGGATAC+TGG - Chr7:80449193-80449212 MsG0780040638.01.T01:intron 55.0%
TGGGCTATGAGTAGGTGGAG+GGG - Chr7:80447748-80447767 MsG0780040638.01.T01:intron 55.0%
TTTGCTCTCGTCCTCCCGAA+GGG - Chr7:80447602-80447621 MsG0780040638.01.T01:intron 55.0%
!! CGAGAGTATCCGCGGAGTAT+CGG - Chr7:80449698-80449717 MsG0780040638.01.T01:intron 55.0%
!! GTTGATGGCTCAGGGTAGAG+AGG - Chr7:80450651-80450670 MsG0780040638.01.T01:CDS 55.0%
AGCCTCCATAACCCCTCCGA+GGG + Chr7:80447004-80447023 None:intergenic 60.0%
ATCCCTCGGAGGGGTTATGG+AGG - Chr7:80446999-80447018 MsG0780040638.01.T01:CDS 60.0%
ATGGCTCAGGGTAGAGAGGG+AGG - Chr7:80450655-80450674 MsG0780040638.01.T01:CDS 60.0%
CACGTAGCCAACCCACTTCG+TGG + Chr7:80450006-80450025 None:intergenic 60.0%
CCCCACATAATGGCCTGTCC+AGG + Chr7:80450787-80450806 None:intergenic 60.0%
GCAATCTCTGGATCCCTCGG+AGG - Chr7:80446988-80447007 MsG0780040638.01.T01:CDS 60.0%
GGATTCCTTGCAGGGACAGC+AGG - Chr7:80450589-80450608 MsG0780040638.01.T01:CDS 60.0%
GGGCTATGAGTAGGTGGAGG+GGG - Chr7:80447749-80447768 MsG0780040638.01.T01:intron 60.0%
GTTTGCTCTCGTCCTCCCGA+AGG - Chr7:80447601-80447620 MsG0780040638.01.T01:intron 60.0%
TAGGACCTGCTGTCCCTGCA+AGG + Chr7:80450597-80450616 None:intergenic 60.0%
TATCCACCCACACCACCGGA+AGG - Chr7:80448106-80448125 MsG0780040638.01.T01:intron 60.0%
TGGATCCCTCGGAGGGGTTA+TGG - Chr7:80446996-80447015 MsG0780040638.01.T01:CDS 60.0%
CACCAGCCCAAAGCCCACGA+AGG + Chr7:80450435-80450454 None:intergenic 65.0%
CAGCCTCCATAACCCCTCCG+AGG + Chr7:80447005-80447024 None:intergenic 65.0%
CATCCTTCCGGTGGTGTGGG+TGG + Chr7:80448112-80448131 None:intergenic 65.0%
!! GGCCTTCGTGGGCTTTGGGC+TGG - Chr7:80450430-80450449 MsG0780040638.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 80446687 80450979 80446687 ID=MsG0780040638.01;Name=MsG0780040638.01
Chr7 mRNA 80446687 80450979 80446687 ID=MsG0780040638.01.T01;Parent=MsG0780040638.01;Name=MsG0780040638.01.T01;_AED=0.38;_eAED=0.38;_QI=87|1|1|1|0.5|0.33|3|118|310
Chr7 exon 80446687 80447335 80446687 ID=MsG0780040638.01.T01:exon:18532;Parent=MsG0780040638.01.T01
Chr7 exon 80450337 80450777 80450337 ID=MsG0780040638.01.T01:exon:18531;Parent=MsG0780040638.01.T01
Chr7 exon 80450932 80450979 80450932 ID=MsG0780040638.01.T01:exon:18530;Parent=MsG0780040638.01.T01
Chr7 five_prime_UTR 80450932 80450979 80450932 ID=MsG0780040638.01.T01:five_prime_utr;Parent=MsG0780040638.01.T01
Chr7 five_prime_UTR 80450739 80450777 80450739 ID=MsG0780040638.01.T01:five_prime_utr;Parent=MsG0780040638.01.T01
Chr7 CDS 80450337 80450738 80450337 ID=MsG0780040638.01.T01:cds;Parent=MsG0780040638.01.T01
Chr7 CDS 80446805 80447335 80446805 ID=MsG0780040638.01.T01:cds;Parent=MsG0780040638.01.T01
Chr7 three_prime_UTR 80446687 80446804 80446687 ID=MsG0780040638.01.T01:three_prime_utr;Parent=MsG0780040638.01.T01
Gene Sequence

>MsG0780040638.01.T01

ATGTATCAACAAGTTGCGCAGCAAGATAGCAGTAAGAAATCAATTCCACCTTACATGAAGGCAATCTCTGGATCCCTCGGAGGGGTTATGGAGGCTGCTTGTCTACAACCAATTGATGTCATCAAGACCAGATTGCAGCTTGATAGGTCTGGGAATTACAAGGGAATTGCTCATTGTGGTGCCACAATTGTACGTTCAGAAGGTGTGCGTGCTTTATGGAAGGGTTTAACACCTTTTGCCACACATTTGACTTTGAAGTATACGCTTCGTATGGGTTCAAATGCAGTACTTCAGTCAGCATTTAAGGATTCTCAGACTGGGAAGATTAGTAATCATGGCCGCCTTCTTTCTGGATTCGGTGCTGGAGTTCTTGAGGCTGTTGTCATTGTCACGCCATTTGAGGTGGTGAAAATAAGATTGCAGCAGCAGAAAGGGCTAAGCCATGAGCTTTTGAAATATAGAGGTCCTGTGCATTGTGCAGGAATGATCATAAAGGAAGAAGGCCTTCGTGGGCTTTGGGCTGGTGTTACTCCTACTATAATGCGTAATGGAACAAATCAATCTGTGATGTTTACTGCCAAAAATACTTTTGATGTGCTTTTGTGGAAGAAAAATGAAGGAGATGGTAGAGTTCTTCTACCATGGCAGTCGATGATTTCAGGATTCCTTGCAGGGACAGCAGGTCCTATTTGCACCGGTCCCTTTGATGTAGTGAAAACAAGGTTGATGGCTCAGGGTAGAGAGGGAGGTGAAGTGAAGTACAAGGGTATGATCCATGCCATCAGAACAATATTTGCAGAAGAAGGAATTCTTGCATTATGGAAAGGTCTGTTACCTCGTCTCATGAGAATCCCACCTGGACAGGCCATTATGTGGGGTGTGGCTGATCAAGTAATTGGTTTGTATGAGAGGAGATATCTTCAAACTTCATGA
Protein sequence

>MsG0780040638.01.T01

MYQQVAQQDSSKKSIPPYMKAISGSLGGVMEAACLQPIDVIKTRLQLDRSGNYKGIAHCGATIVRSEGVRALWKGLTPFATHLTLKYTLRMGSNAVLQSAFKDSQTGKISNHGRLLSGFGAGVLEAVVIVTPFEVVKIRLQQQKGLSHELLKYRGPVHCAGMIIKEEGLRGLWAGVTPTIMRNGTNQSVMFTAKNTFDVLLWKKNEGDGRVLLPWQSMISGFLAGTAGPICTGPFDVVKTRLMAQGREGGEVKYKGMIHAIRTIFAEEGILALWKGLLPRLMRIPPGQAIMWGVADQVIGLYERRYLQTS*