Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025231.01.T01 | XP_024639264.1 | 99.656 | 291 | 1 | 0 | 6 | 296 | 1 | 291 | 0 | 599 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025231.01.T01 | Q7DNC3 | 65.753 | 292 | 99 | 1 | 6 | 296 | 1 | 292 | 6.38E-150 | 425 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025231.01.T01 | A0A396HM95 | 99.656 | 291 | 1 | 0 | 6 | 296 | 1 | 291 | 0.0 | 599 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048773.01 | MsG0580025231.01 | 0.830092 | 3.567423e-55 | 3.720909e-52 |
| MsG0080048845.01 | MsG0580025231.01 | 0.813880 | 2.045809e-51 | 1.352134e-48 |
| MsG0080048849.01 | MsG0580025231.01 | 0.802362 | 5.816322e-49 | 2.843769e-46 |
| MsG0080048938.01 | MsG0580025231.01 | 0.821918 | 3.126446e-53 | 2.578331e-50 |
| MsG0080049002.01 | MsG0580025231.01 | 0.816473 | 5.431160e-52 | 3.851978e-49 |
| MsG0080049068.01 | MsG0580025231.01 | 0.803617 | 3.200739e-49 | 1.615855e-46 |
| MsG0180000114.01 | MsG0580025231.01 | 0.800665 | 1.295292e-48 | 6.066196e-46 |
| MsG0180000599.01 | MsG0580025231.01 | 0.807327 | 5.335819e-50 | 2.963495e-47 |
| MsG0180000784.01 | MsG0580025231.01 | 0.822863 | 1.886633e-53 | 1.598350e-50 |
| MsG0180000785.01 | MsG0580025231.01 | 0.812413 | 4.293484e-51 | 2.728188e-48 |
| MsG0180000843.01 | MsG0580025231.01 | 0.843296 | 1.528790e-58 | 2.381414e-55 |
| MsG0180001064.01 | MsG0580025231.01 | 0.811656 | 6.276323e-51 | 3.907285e-48 |
| MsG0180001100.01 | MsG0580025231.01 | 0.840091 | 1.071231e-57 | 1.509785e-54 |
| MsG0180001105.01 | MsG0580025231.01 | 0.846315 | 2.346273e-59 | 4.022106e-56 |
| MsG0180002399.01 | MsG0580025231.01 | 0.821081 | 4.881541e-53 | 3.932454e-50 |
| MsG0180002700.01 | MsG0580025231.01 | 0.825707 | 4.047894e-54 | 3.718095e-51 |
| MsG0180003353.01 | MsG0580025231.01 | 0.811612 | 6.417884e-51 | 3.990808e-48 |
| MsG0180003821.01 | MsG0580025231.01 | 0.822162 | 2.745725e-53 | 2.279999e-50 |
| MsG0180004103.01 | MsG0580025231.01 | 0.834867 | 2.337977e-56 | 2.810329e-53 |
| MsG0180004192.01 | MsG0580025231.01 | 0.819200 | 1.315827e-52 | 1.005860e-49 |
| MsG0180004246.01 | MsG0580025231.01 | 0.868073 | 8.562288e-66 | 3.057120e-62 |
| MsG0180004814.01 | MsG0580025231.01 | 0.840727 | 7.306165e-58 | 1.050127e-54 |
| MsG0180004934.01 | MsG0580025231.01 | 0.812918 | 3.328154e-51 | 2.142967e-48 |
| MsG0180005039.01 | MsG0580025231.01 | 0.809822 | 1.564985e-50 | 9.282504e-48 |
| MsG0180005349.01 | MsG0580025231.01 | 0.813607 | 2.350106e-51 | 1.541777e-48 |
| MsG0180005803.01 | MsG0580025231.01 | 0.843830 | 1.101048e-58 | 1.744024e-55 |
| MsG0180005807.01 | MsG0580025231.01 | 0.867388 | 1.420276e-65 | 4.950687e-62 |
| MsG0180005829.01 | MsG0580025231.01 | 0.826046 | 3.362863e-54 | 3.118744e-51 |
| MsG0180006031.01 | MsG0580025231.01 | 0.808576 | 2.894490e-50 | 1.660936e-47 |
| MsG0280010564.01 | MsG0580025231.01 | 0.838678 | 2.493482e-57 | 3.364377e-54 |
| MsG0280010569.01 | MsG0580025231.01 | 0.834112 | 3.618604e-56 | 4.252364e-53 |
| MsG0280010916.01 | MsG0580025231.01 | 0.811524 | 6.704639e-51 | 4.159790e-48 |
| MsG0280010975.01 | MsG0580025231.01 | 0.800733 | 1.255074e-48 | 5.887780e-46 |
| MsG0280011073.01 | MsG0580025231.01 | 0.802504 | 5.435822e-49 | 2.667236e-46 |
| MsG0280011255.01 | MsG0580025231.01 | 0.808331 | 3.264678e-50 | 1.861515e-47 |
| MsG0280011411.01 | MsG0580025231.01 | 0.818681 | 1.726592e-52 | 1.301071e-49 |
| MsG0380013177.01 | MsG0580025231.01 | 0.809930 | 1.483360e-50 | 8.823324e-48 |
| MsG0380014909.01 | MsG0580025231.01 | 0.831049 | 2.080474e-55 | 2.231791e-52 |
| MsG0480018584.01 | MsG0580025231.01 | 0.806695 | 7.259526e-50 | 3.966231e-47 |
| MsG0480019007.01 | MsG0580025231.01 | 0.830157 | 3.439892e-55 | 3.594933e-52 |
| MsG0480019711.01 | MsG0580025231.01 | 0.830441 | 2.931742e-55 | 3.088987e-52 |
| MsG0480019971.01 | MsG0580025231.01 | 0.806670 | 7.350502e-50 | 4.013117e-47 |
| MsG0480020690.01 | MsG0580025231.01 | 0.816651 | 4.953651e-52 | 3.530726e-49 |
| MsG0480021060.01 | MsG0580025231.01 | 0.807595 | 4.681747e-50 | 2.618139e-47 |
| MsG0480021207.01 | MsG0580025231.01 | 0.810768 | 9.778668e-51 | 5.946804e-48 |
| MsG0480021248.01 | MsG0580025231.01 | 0.803163 | 3.975032e-49 | 1.983488e-46 |
| MsG0480021377.01 | MsG0580025231.01 | 0.809532 | 1.806098e-50 | 1.063087e-47 |
| MsG0480021406.01 | MsG0580025231.01 | 0.815221 | 1.033319e-51 | 7.081404e-49 |
| MsG0480022130.01 | MsG0580025231.01 | 0.807591 | 4.691415e-50 | 2.623276e-47 |
| MsG0480022166.01 | MsG0580025231.01 | 0.811146 | 8.102617e-51 | 4.976984e-48 |
| MsG0480022537.01 | MsG0580025231.01 | 0.844253 | 8.474417e-59 | 1.360139e-55 |
| MsG0480022617.01 | MsG0580025231.01 | 0.834573 | 2.771359e-56 | 3.302471e-53 |
| MsG0480022624.01 | MsG0580025231.01 | 0.828908 | 6.920339e-55 | 6.972601e-52 |
| MsG0480022918.01 | MsG0580025231.01 | 0.822134 | 2.786581e-53 | 2.312208e-50 |
| MsG0480023381.01 | MsG0580025231.01 | 0.843633 | 1.242686e-58 | 1.956484e-55 |
| MsG0480023553.01 | MsG0580025231.01 | 0.826686 | 2.367424e-54 | 2.235924e-51 |
| MsG0480023565.01 | MsG0580025231.01 | 0.830727 | 2.495738e-55 | 2.651953e-52 |
| MsG0480023578.01 | MsG0580025231.01 | 0.801861 | 7.371696e-49 | 3.558523e-46 |
| MsG0480023845.01 | MsG0580025231.01 | 0.824136 | 9.505732e-54 | 8.347596e-51 |
| MsG0480023877.01 | MsG0580025231.01 | 0.804005 | 2.658334e-49 | 1.355523e-46 |
| MsG0580024717.01 | MsG0580025231.01 | 0.847674 | 9.956042e-60 | 1.783178e-56 |
| MsG0580024873.01 | MsG0580025231.01 | 0.829037 | 6.439466e-55 | 6.512816e-52 |
| MsG0580025055.01 | MsG0580025231.01 | 0.815377 | 9.539658e-52 | 6.566005e-49 |
| MsG0580025231.01 | MsG0580025827.01 | 0.807674 | 4.502924e-50 | 2.523501e-47 |
| MsG0580025231.01 | MsG0580025845.01 | 0.821322 | 4.294077e-53 | 3.482174e-50 |
| MsG0580025231.01 | MsG0580025906.01 | 0.811952 | 5.412829e-51 | 3.396536e-48 |
| MsG0580025231.01 | MsG0580026271.01 | 0.820349 | 7.190866e-53 | 5.675687e-50 |
| MsG0580025231.01 | MsG0580026498.01 | 0.802485 | 5.486524e-49 | 2.690759e-46 |
| MsG0580025231.01 | MsG0580027394.01 | 0.816963 | 4.217317e-52 | 3.031850e-49 |
| MsG0580025231.01 | MsG0580027655.01 | 0.800007 | 1.763539e-48 | 8.122128e-46 |
| MsG0580025231.01 | MsG0580028024.01 | 0.836300 | 1.014419e-56 | 1.273314e-53 |
| MsG0580025231.01 | MsG0580028033.01 | 0.800344 | 1.505816e-48 | 6.995007e-46 |
| MsG0580025231.01 | MsG0580028925.01 | 0.833716 | 4.545655e-56 | 5.278285e-53 |
| MsG0580025231.01 | MsG0580029414.01 | 0.829390 | 5.288538e-55 | 5.405368e-52 |
| MsG0580025231.01 | MsG0580029529.01 | 0.817748 | 2.806729e-52 | 2.061578e-49 |
| MsG0580025231.01 | MsG0580029734.01 | 0.804954 | 1.685429e-49 | 8.807203e-47 |
| MsG0580025231.01 | MsG0580029912.01 | 0.824713 | 6.951845e-54 | 6.207533e-51 |
| MsG0580025231.01 | MsG0580029967.01 | 0.802344 | 5.867033e-49 | 2.867152e-46 |
| MsG0580025231.01 | MsG0680030680.01 | 0.856925 | 2.313325e-62 | 5.611059e-59 |
| MsG0580025231.01 | MsG0680030858.01 | 0.805335 | 1.402598e-49 | 7.400867e-47 |
| MsG0580025231.01 | MsG0680032006.01 | 0.803802 | 2.929760e-49 | 1.486104e-46 |
| MsG0580025231.01 | MsG0680032254.01 | 0.820307 | 7.351130e-53 | 5.795399e-50 |
| MsG0580025231.01 | MsG0680032413.01 | 0.822022 | 2.957779e-53 | 2.446299e-50 |
| MsG0580025231.01 | MsG0680032830.01 | 0.824665 | 7.136767e-54 | 6.363829e-51 |
| MsG0580025231.01 | MsG0680033377.01 | 0.820576 | 6.376928e-53 | 5.064836e-50 |
| MsG0580025231.01 | MsG0680034064.01 | 0.802550 | 5.319224e-49 | 2.613038e-46 |
| MsG0580025231.01 | MsG0680034767.01 | 0.810639 | 1.042925e-50 | 6.320391e-48 |
| MsG0580025231.01 | MsG0680034981.01 | -0.840766 | 7.134313e-58 | 1.026640e-54 |
| MsG0580025231.01 | MsG0680035307.01 | 0.813817 | 2.111983e-51 | 1.393485e-48 |
| MsG0580025231.01 | MsG0680035664.01 | 0.809434 | 1.896059e-50 | 1.113114e-47 |
| MsG0580025231.01 | MsG0680035707.01 | 0.816206 | 6.231692e-52 | 4.387921e-49 |
| MsG0580025231.01 | MsG0780036443.01 | 0.806013 | 1.010735e-49 | 5.427030e-47 |
| MsG0580025231.01 | MsG0780036517.01 | 0.823876 | 1.094046e-53 | 9.537764e-51 |
| MsG0580025231.01 | MsG0780036585.01 | 0.805232 | 1.474134e-49 | 7.757762e-47 |
| MsG0580025231.01 | MsG0780036664.01 | 0.815313 | 9.857243e-52 | 6.772649e-49 |
| MsG0580025231.01 | MsG0780036792.01 | 0.818351 | 2.050879e-52 | 1.531603e-49 |
| MsG0580025231.01 | MsG0780036803.01 | 0.849449 | 3.209919e-60 | 6.087124e-57 |
| MsG0580025231.01 | MsG0780037330.01 | 0.802607 | 5.177022e-49 | 2.546885e-46 |
| MsG0580025231.01 | MsG0780037363.01 | 0.805706 | 1.172932e-49 | 6.248740e-47 |
| MsG0580025231.01 | MsG0780037399.01 | 0.813028 | 3.148574e-51 | 2.033358e-48 |
| MsG0580025231.01 | MsG0780038334.01 | 0.816657 | 4.938397e-52 | 3.520452e-49 |
| MsG0580025231.01 | MsG0780039186.01 | 0.819606 | 1.063291e-52 | 8.220515e-50 |
| MsG0580025231.01 | MsG0780039233.01 | 0.805961 | 1.036815e-49 | 5.559636e-47 |
| MsG0580025231.01 | MsG0780039975.01 | 0.838427 | 2.894566e-57 | 3.875716e-54 |
| MsG0580025231.01 | MsG0780040278.01 | 0.843503 | 1.346203e-58 | 2.110611e-55 |
| MsG0580025231.01 | MsG0780040343.01 | 0.801946 | 7.084138e-49 | 3.426798e-46 |
| MsG0580025231.01 | MsG0780040388.01 | 0.800396 | 1.469991e-48 | 6.837381e-46 |
| MsG0580025231.01 | MsG0780040700.01 | 0.819113 | 1.377567e-52 | 1.050559e-49 |
| MsG0580025231.01 | MsG0780040763.01 | 0.800136 | 1.660392e-48 | 7.672214e-46 |
| MsG0580025231.01 | MsG0780040825.01 | -0.812798 | 3.536746e-51 | 2.269909e-48 |
| MsG0580025231.01 | MsG0780041004.01 | 0.810217 | 1.286425e-50 | 7.709040e-48 |
| MsG0580025231.01 | MsG0780041091.01 | 0.853399 | 2.452004e-61 | 5.291301e-58 |
| MsG0580025231.01 | MsG0780041187.01 | 0.807203 | 5.668491e-50 | 3.138062e-47 |
| MsG0580025231.01 | MsG0780041262.01 | 0.802405 | 5.699158e-49 | 2.789481e-46 |
| MsG0580025231.01 | MsG0780041634.01 | 0.826065 | 3.328689e-54 | 3.088622e-51 |
| MsG0580025231.01 | MsG0880041947.01 | 0.805752 | 1.146741e-49 | 6.116534e-47 |
| MsG0580025231.01 | MsG0880042044.01 | 0.807721 | 4.401104e-50 | 2.469477e-47 |
| MsG0580025231.01 | MsG0880042695.01 | 0.802979 | 4.338261e-49 | 2.154480e-46 |
| MsG0580025231.01 | MsG0880042876.01 | 0.812278 | 4.593750e-51 | 2.908437e-48 |
| MsG0580025231.01 | MsG0880042988.01 | 0.836778 | 7.667563e-57 | 9.762229e-54 |
| MsG0580025231.01 | MsG0880043965.01 | 0.801353 | 9.370279e-49 | 4.465431e-46 |
| MsG0580025231.01 | MsG0880044043.01 | 0.815072 | 1.114590e-51 | 7.607694e-49 |
| MsG0580025231.01 | MsG0880044304.01 | 0.802223 | 6.212745e-49 | 3.026645e-46 |
| MsG0580025231.01 | MsG0880044487.01 | 0.818211 | 2.206855e-52 | 1.641546e-49 |
| MsG0580025231.01 | MsG0880044538.01 | 0.827343 | 1.648271e-54 | 1.587066e-51 |
| MsG0580025231.01 | MsG0880044691.01 | 0.804998 | 1.650570e-49 | 8.634138e-47 |
| MsG0580025231.01 | MsG0880044884.01 | 0.825937 | 3.569223e-54 | 3.300097e-51 |
| MsG0580025231.01 | MsG0880045044.01 | 0.822541 | 2.241813e-53 | 1.882035e-50 |
| MsG0580025231.01 | MsG0880045668.01 | 0.826671 | 2.386917e-54 | 2.253445e-51 |
| MsG0580025231.01 | MsG0880045722.01 | 0.816350 | 5.787437e-52 | 4.091150e-49 |
| MsG0580025231.01 | MsG0880046334.01 | -0.818899 | 1.540811e-52 | 1.168195e-49 |
| MsG0580025231.01 | MsG0880046723.01 | 0.828417 | 9.093653e-55 | 9.033783e-52 |
| MsG0580025231.01 | MsG0880046764.01 | 0.803843 | 2.872661e-49 | 1.458748e-46 |
| MsG0580025231.01 | MsG0880046765.01 | 0.810377 | 1.187998e-50 | 7.149374e-48 |
| MsG0580025231.01 | MsG0880047046.01 | 0.820766 | 5.767955e-53 | 4.605678e-50 |
| MsG0580025231.01 | MsG0880047152.01 | 0.808207 | 3.468798e-50 | 1.971460e-47 |
| MsG0580025231.01 | MsG0880047156.01 | 0.806195 | 9.256273e-50 | 4.993104e-47 |
| MsG0580025231.01 | MsG0880047394.01 | 0.840598 | 7.897555e-58 | 1.130482e-54 |
| MsG0580025231.01 | MsG0880047538.01 | 0.820646 | 6.146215e-53 | 4.890839e-50 |
| MsG0580025231.01 | MsG0880047614.01 | 0.803496 | 3.391055e-49 | 1.706659e-46 |
| MsG0380015438.01 | MsG0580025231.01 | 0.801113 | 1.049328e-48 | 4.970467e-46 |
| MsG0380015847.01 | MsG0580025231.01 | -0.839755 | 1.310253e-57 | 1.827018e-54 |
| MsG0380015896.01 | MsG0580025231.01 | 0.831200 | 1.909713e-55 | 2.057717e-52 |
| MsG0380016194.01 | MsG0580025231.01 | 0.817899 | 2.595873e-52 | 1.914448e-49 |
| MsG0380016284.01 | MsG0580025231.01 | 0.862776 | 3.987601e-64 | 1.181788e-60 |
| MsG0380016864.01 | MsG0580025231.01 | 0.826739 | 2.299157e-54 | 2.174763e-51 |
| MsG0380017202.01 | MsG0580025231.01 | 0.805094 | 1.575573e-49 | 8.262282e-47 |
| MsG0380017293.01 | MsG0580025231.01 | 0.811918 | 5.506138e-51 | 3.451742e-48 |
| MsG0380017423.01 | MsG0580025231.01 | 0.818956 | 1.495342e-52 | 1.135550e-49 |
| MsG0380017931.01 | MsG0580025231.01 | 0.831689 | 1.448117e-55 | 1.583255e-52 |
| MsG0380018037.01 | MsG0580025231.01 | 0.840152 | 1.032520e-57 | 1.457907e-54 |
| MsG0380018061.01 | MsG0580025231.01 | 0.808584 | 2.882839e-50 | 1.654582e-47 |
| MsG0380018069.01 | MsG0580025231.01 | 0.819346 | 1.219145e-52 | 9.356405e-50 |
| MsG0480018426.01 | MsG0580025231.01 | 0.800704 | 1.272329e-48 | 5.964069e-46 |
| MsG0280006896.01 | MsG0580025231.01 | 0.805805 | 1.118040e-49 | 5.971142e-47 |
| MsG0280006996.01 | MsG0580025231.01 | 0.817403 | 3.357766e-52 | 2.443009e-49 |
| MsG0280007976.01 | MsG0580025231.01 | 0.842255 | 2.891054e-58 | 4.358317e-55 |
| MsG0280008709.01 | MsG0580025231.01 | 0.831744 | 1.403465e-55 | 1.537052e-52 |
| MsG0280008928.01 | MsG0580025231.01 | 0.809024 | 2.320814e-50 | 1.347591e-47 |
| MsG0280008929.01 | MsG0580025231.01 | 0.830927 | 2.229247e-55 | 2.382853e-52 |
| MsG0280008942.01 | MsG0580025231.01 | 0.804624 | 1.975463e-49 | 1.023420e-46 |
| MsG0280009256.01 | MsG0580025231.01 | 0.814691 | 1.353982e-51 | 9.147398e-49 |
| MsG0280009685.01 | MsG0580025231.01 | 0.803244 | 3.823091e-49 | 1.911636e-46 |
| MsG0280009756.01 | MsG0580025231.01 | 0.805741 | 1.153344e-49 | 6.149796e-47 |
| MsG0280009869.01 | MsG0580025231.01 | 0.834948 | 2.231133e-56 | 2.688627e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780040054.01 | MsG0580025231.01 | PPI |
| MsG0780040054.01 | MsG0580025231.01 | PPI |
| MsG0780040638.01 | MsG0580025231.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025231.01.T01 | MTR_5g024770 | 92.096 | 291 | 5 | 1 | 6 | 296 | 1 | 273 | 0.0 | 540 |
| MsG0580025231.01.T01 | MTR_4g094578 | 62.411 | 282 | 100 | 2 | 21 | 296 | 24 | 305 | 1.11e-129 | 371 |
| MsG0580025231.01.T01 | MTR_8g099910 | 49.296 | 284 | 140 | 1 | 17 | 296 | 64 | 347 | 1.65e-99 | 296 |
| MsG0580025231.01.T01 | MTR_7g083790 | 49.470 | 283 | 139 | 1 | 18 | 296 | 74 | 356 | 1.14e-98 | 295 |
| MsG0580025231.01.T01 | MTR_6g033280 | 47.857 | 280 | 142 | 1 | 21 | 296 | 58 | 337 | 4.28e-95 | 285 |
| MsG0580025231.01.T01 | MTR_5g073040 | 27.143 | 280 | 181 | 5 | 27 | 291 | 40 | 311 | 9.34e-20 | 88.2 |
| MsG0580025231.01.T01 | MTR_4g057850 | 25.163 | 306 | 193 | 11 | 8 | 290 | 7 | 299 | 8.05e-16 | 76.6 |
| MsG0580025231.01.T01 | MTR_7g064980 | 26.437 | 174 | 120 | 2 | 27 | 192 | 135 | 308 | 2.79e-13 | 69.3 |
| MsG0580025231.01.T01 | MTR_5g009500 | 26.129 | 310 | 178 | 11 | 27 | 294 | 39 | 339 | 4.11e-13 | 69.3 |
| MsG0580025231.01.T01 | MTR_8g027975 | 24.927 | 341 | 202 | 10 | 1 | 296 | 24 | 355 | 6.25e-13 | 68.6 |
| MsG0580025231.01.T01 | MTR_8g096050 | 25.143 | 175 | 121 | 4 | 28 | 193 | 324 | 497 | 1.19e-12 | 68.2 |
| MsG0580025231.01.T01 | MTR_7g109135 | 29.714 | 175 | 110 | 4 | 36 | 198 | 34 | 207 | 1.43e-12 | 66.2 |
| MsG0580025231.01.T01 | MTR_7g109135 | 29.714 | 175 | 110 | 4 | 36 | 198 | 55 | 228 | 2.21e-12 | 65.9 |
| MsG0580025231.01.T01 | MTR_7g109135 | 29.714 | 175 | 110 | 4 | 36 | 198 | 133 | 306 | 2.35e-12 | 66.6 |
| MsG0580025231.01.T01 | MTR_5g055410 | 27.807 | 187 | 117 | 5 | 39 | 209 | 132 | 316 | 4.00e-12 | 66.2 |
| MsG0580025231.01.T01 | MTR_7g066690 | 25.131 | 191 | 130 | 3 | 17 | 200 | 117 | 301 | 7.65e-12 | 65.1 |
| MsG0580025231.01.T01 | MTR_4g018750 | 29.348 | 184 | 104 | 5 | 32 | 193 | 21 | 200 | 7.85e-12 | 65.1 |
| MsG0580025231.01.T01 | MTR_3g098460 | 23.729 | 177 | 122 | 4 | 27 | 192 | 300 | 474 | 1.05e-11 | 65.5 |
| MsG0580025231.01.T01 | MTR_4g018750 | 29.348 | 184 | 104 | 5 | 32 | 193 | 21 | 200 | 1.11e-11 | 64.7 |
| MsG0580025231.01.T01 | MTR_8g076760 | 28.877 | 187 | 101 | 9 | 38 | 198 | 125 | 305 | 1.50e-11 | 64.3 |
| MsG0580025231.01.T01 | MTR_3g462140 | 26.708 | 161 | 110 | 2 | 41 | 194 | 135 | 294 | 2.33e-11 | 63.5 |
| MsG0580025231.01.T01 | MTR_1g087840 | 27.746 | 173 | 112 | 4 | 38 | 198 | 132 | 303 | 2.38e-11 | 63.5 |
| MsG0580025231.01.T01 | MTR_7g084400 | 24.561 | 171 | 123 | 3 | 27 | 192 | 310 | 479 | 4.63e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580025231.01.T01 | AT2G17270 | 65.753 | 292 | 99 | 1 | 6 | 296 | 1 | 292 | 6.51e-151 | 425 |
| MsG0580025231.01.T01 | AT3G48850 | 48.410 | 283 | 142 | 1 | 18 | 296 | 63 | 345 | 9.81e-102 | 302 |
| MsG0580025231.01.T01 | AT5G14040 | 49.158 | 297 | 146 | 2 | 5 | 296 | 60 | 356 | 3.62e-101 | 301 |
| MsG0580025231.01.T01 | AT1G07030 | 26.786 | 280 | 183 | 6 | 27 | 291 | 41 | 313 | 6.07e-19 | 85.9 |
| MsG0580025231.01.T01 | AT5G01340 | 26.936 | 297 | 189 | 9 | 14 | 290 | 7 | 295 | 1.71e-18 | 84.3 |
| MsG0580025231.01.T01 | AT2G30160 | 26.246 | 301 | 186 | 8 | 14 | 291 | 31 | 318 | 1.88e-17 | 81.6 |
| MsG0580025231.01.T01 | AT3G53940 | 28.161 | 174 | 117 | 2 | 27 | 192 | 181 | 354 | 1.27e-15 | 76.6 |
| MsG0580025231.01.T01 | AT2G37890 | 27.586 | 174 | 118 | 2 | 27 | 192 | 153 | 326 | 1.60e-14 | 73.2 |
| MsG0580025231.01.T01 | AT3G20240 | 24.742 | 291 | 186 | 9 | 27 | 291 | 53 | 336 | 1.73e-12 | 67.4 |
| MsG0580025231.01.T01 | AT4G01100 | 26.728 | 217 | 125 | 6 | 11 | 198 | 83 | 294 | 2.67e-12 | 66.6 |
| MsG0580025231.01.T01 | AT4G01100 | 26.728 | 217 | 125 | 6 | 11 | 198 | 133 | 344 | 3.68e-12 | 66.6 |
| MsG0580025231.01.T01 | AT3G54110 | 22.905 | 179 | 131 | 1 | 27 | 198 | 119 | 297 | 4.33e-12 | 65.9 |
| MsG0580025231.01.T01 | AT5G66380 | 27.660 | 188 | 106 | 7 | 38 | 201 | 122 | 303 | 4.35e-12 | 65.9 |
| MsG0580025231.01.T01 | AT4G01100 | 26.728 | 217 | 125 | 6 | 11 | 198 | 147 | 358 | 5.81e-12 | 65.9 |
| MsG0580025231.01.T01 | AT4G03115 | 25.877 | 228 | 150 | 6 | 21 | 244 | 37 | 249 | 3.01e-11 | 63.5 |
| MsG0580025231.01.T01 | AT5G58970 | 26.054 | 261 | 154 | 9 | 37 | 270 | 27 | 275 | 3.05e-11 | 63.5 |
| MsG0580025231.01.T01 | AT4G03115 | 25.877 | 228 | 150 | 6 | 21 | 244 | 69 | 281 | 3.73e-11 | 63.5 |
| MsG0580025231.01.T01 | AT3G21390 | 25.481 | 208 | 125 | 5 | 24 | 202 | 150 | 356 | 4.16e-11 | 63.2 |
| MsG0580025231.01.T01 | AT3G21390 | 25.359 | 209 | 126 | 5 | 24 | 203 | 128 | 335 | 4.41e-11 | 63.2 |
| MsG0580025231.01.T01 | AT5G48970 | 25.243 | 206 | 119 | 5 | 24 | 198 | 62 | 263 | 6.03e-11 | 62.0 |
| MsG0580025231.01.T01 | AT5G48970 | 25.243 | 206 | 119 | 5 | 24 | 198 | 133 | 334 | 6.56e-11 | 62.8 |
| MsG0580025231.01.T01 | AT2G47490 | 28.652 | 178 | 112 | 5 | 38 | 202 | 129 | 304 | 8.49e-11 | 62.0 |
Find 73 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATACTGTAATACTTAAT+AGG | 0.188446 | 5:-15593524 | None:intergenic |
| CCGTGGACTTGTTCCACTTT+TGG | 0.215295 | 5:+15593974 | MsG0580025231.01.T01:CDS |
| AAGACTCCTGGTAAATAAAT+TGG | 0.271424 | 5:-15595106 | None:intergenic |
| AAATGGACACAGAGCTAAAT+TGG | 0.274987 | 5:-15593750 | None:intergenic |
| GGATGGACAGGCAAGTTCTT+TGG | 0.324400 | 5:+15593599 | MsG0580025231.01.T01:CDS |
| TCTTCCTATTAGAATGTTGC+TGG | 0.355082 | 5:+15595125 | MsG0580025231.01.T01:CDS |
| AACCATTGCAAGGTTATAGA+AGG | 0.364536 | 5:-15595153 | None:intergenic |
| CCAACCAGCAACATTCTAAT+AGG | 0.366589 | 5:-15595129 | None:intergenic |
| CCTTCTGCTGCATATACCTT+TGG | 0.377619 | 5:-15593836 | None:intergenic |
| TATTATGCCCTTTGCACCAT+TGG | 0.395910 | 5:+15592478 | MsG0580025231.01.T01:CDS |
| AAATACTGTAATACTTAATA+GGG | 0.401083 | 5:-15593523 | None:intergenic |
| GCTCAAGGAGGATGTAGATT+TGG | 0.412818 | 5:+15593629 | MsG0580025231.01.T01:CDS |
| CATTTGAAGCTGTTAAAGTC+AGG | 0.432003 | 5:+15593768 | MsG0580025231.01.T01:CDS |
| AAAAGCCGAGAGTCTTGTTC+TGG | 0.432484 | 5:+15594978 | MsG0580025231.01.T01:CDS |
| CATGCTTTACTACGTTATTG+AGG | 0.443788 | 5:+15593549 | MsG0580025231.01.T01:CDS |
| TATGCTAAGGGCATGTTTGA+CGG | 0.461515 | 5:+15593809 | MsG0580025231.01.T01:CDS |
| CTGACTTTAACAGCTTCAAA+TGG | 0.463411 | 5:-15593767 | None:intergenic |
| GGGAGTTTACTCCAATGTAT+TGG | 0.465784 | 5:+15593670 | MsG0580025231.01.T01:CDS |
| TACACTGAAGAAAGAGATCA+TGG | 0.466096 | 5:+15592414 | None:intergenic |
| GGCTAGCCAATTTATTTACC+AGG | 0.471960 | 5:+15595100 | MsG0580025231.01.T01:CDS |
| CATTCCTCCAATGGTGCAAA+GGG | 0.480811 | 5:-15592485 | None:intergenic |
| CTGTGAGATTCCTCCTTCCA+TGG | 0.485797 | 5:-15592440 | None:intergenic |
| CCTATTAGAATGTTGCTGGT+TGG | 0.486509 | 5:+15595129 | MsG0580025231.01.T01:CDS |
| TTCTTTGGCTATGGTGCTCA+AGG | 0.488078 | 5:+15593614 | MsG0580025231.01.T01:CDS |
| ATGCTTTACTACGTTATTGA+GGG | 0.494702 | 5:+15593550 | MsG0580025231.01.T01:CDS |
| TGTTTAGCTGGTTATACCGC+TGG | 0.496234 | 5:+15594895 | MsG0580025231.01.T01:CDS |
| GAAAGAGATCATGGCGGCCA+TGG | 0.501490 | 5:+15592423 | MsG0580025231.01.T01:CDS |
| GCCCTTCTATAACCTTGCAA+TGG | 0.509416 | 5:+15595151 | MsG0580025231.01.T01:CDS |
| TATGCCCTTTGCACCATTGG+AGG | 0.515475 | 5:+15592481 | MsG0580025231.01.T01:CDS |
| ACAGGCAAGTTCTTTGGCTA+TGG | 0.516450 | 5:+15593605 | MsG0580025231.01.T01:CDS |
| AGCACAACCTAGTTATGCTA+AGG | 0.519278 | 5:+15593796 | MsG0580025231.01.T01:CDS |
| CTAGGTGTGACATGTTTAGC+TGG | 0.525462 | 5:+15594883 | MsG0580025231.01.T01:CDS |
| GTCCTGTGGAAAGGATGGAC+AGG | 0.530212 | 5:+15593587 | MsG0580025231.01.T01:CDS |
| TTAACTTTCAAAACATCAAG+AGG | 0.535490 | 5:-15592541 | None:intergenic |
| GGAATGTTTCGACCCAAAAG+TGG | 0.540620 | 5:-15593987 | None:intergenic |
| TGCCTGTCCATCCTTTCCAC+AGG | 0.541611 | 5:-15593589 | None:intergenic |
| ACTACGTTATTGAGGGAACA+AGG | 0.543366 | 5:+15593557 | MsG0580025231.01.T01:CDS |
| GGGCCTTCTGTCCTGTGGAA+AGG | 0.544497 | 5:+15593578 | MsG0580025231.01.T01:CDS |
| CTTCTGTCCTGTGGAAAGGA+TGG | 0.546940 | 5:+15593582 | MsG0580025231.01.T01:CDS |
| AATATACAAGACTTCTGTGC+TGG | 0.548042 | 5:-15593697 | None:intergenic |
| GAAGCTACTATATTGTCAGC+AGG | 0.549701 | 5:-15594943 | None:intergenic |
| GAGATCATGGCGGCCATGGA+AGG | 0.551462 | 5:+15592427 | MsG0580025231.01.T01:CDS |
| GCATTCCTCCAATGGTGCAA+AGG | 0.561781 | 5:-15592486 | None:intergenic |
| GGTTATACCGCTGGATCCGT+TGG | 0.563265 | 5:+15594904 | MsG0580025231.01.T01:CDS |
| ATTTGAAGCTGTTAAAGTCA+GGG | 0.563948 | 5:+15593769 | MsG0580025231.01.T01:CDS |
| CATCCTTTCCACAGGACAGA+AGG | 0.566116 | 5:-15593581 | None:intergenic |
| AGCACTGAGCATTCCTCCAA+TGG | 0.567164 | 5:-15592494 | None:intergenic |
| CATGTTTGACGGCTTTCCAA+AGG | 0.568484 | 5:+15593820 | MsG0580025231.01.T01:CDS |
| ATTGGAGGAATGCTCAGTGC+TGG | 0.571365 | 5:+15592496 | MsG0580025231.01.T01:CDS |
| TGTTCAAAAGCTCAACAGCT+AGG | 0.578381 | 5:+15594865 | MsG0580025231.01.T01:CDS |
| AACAAGGGCCTTCTGTCCTG+TGG | 0.579264 | 5:+15593573 | MsG0580025231.01.T01:CDS |
| CATTCTAATAGGAAGACTCC+TGG | 0.594584 | 5:-15595118 | None:intergenic |
| ATCATGGCGGCCATGGAAGG+AGG | 0.596330 | 5:+15592430 | MsG0580025231.01.T01:CDS |
| GTGCAAAGGGCATAATACCT+TGG | 0.599144 | 5:-15592472 | None:intergenic |
| GTGCTGGTCTACCAATACAT+TGG | 0.601303 | 5:-15593681 | None:intergenic |
| TTTGGCTATGGTGCTCAAGG+AGG | 0.604197 | 5:+15593617 | MsG0580025231.01.T01:CDS |
| ACCATTGCAAGGTTATAGAA+GGG | 0.611334 | 5:-15595152 | None:intergenic |
| CCAAAGGTATATGCAGCAGA+AGG | 0.616204 | 5:+15593836 | MsG0580025231.01.T01:CDS |
| AAATACCAGAACAAGACTCT+CGG | 0.618357 | 5:-15594983 | None:intergenic |
| CTACGTTATTGAGGGAACAA+GGG | 0.623719 | 5:+15593558 | MsG0580025231.01.T01:CDS |
| GCACAACCTAGTTATGCTAA+GGG | 0.624854 | 5:+15593797 | MsG0580025231.01.T01:CDS |
| CATGGAAGGAGGAATCTCAC+AGG | 0.638936 | 5:+15592441 | MsG0580025231.01.T01:CDS |
| AGGAGTTGTAGCAAGATGAG+TGG | 0.639871 | 5:-15592521 | None:intergenic |
| GAATGTTGAGAACATAACCA+TGG | 0.644534 | 5:-15594788 | None:intergenic |
| AACATGCCCTTAGCATAACT+AGG | 0.649459 | 5:-15593803 | None:intergenic |
| ATTAGAAACAAAGCTACCAA+CGG | 0.659190 | 5:-15594920 | None:intergenic |
| AAAGCTACCAACGGATCCAG+CGG | 0.665155 | 5:-15594911 | None:intergenic |
| TATGCAGCAGAAGGCGCACG+AGG | 0.673682 | 5:+15593845 | MsG0580025231.01.T01:CDS |
| CCAAAAGTGGAACAAGTCCA+CGG | 0.677014 | 5:-15593974 | None:intergenic |
| TCTCACAGGAATTAACGCCA+AGG | 0.701621 | 5:+15592455 | MsG0580025231.01.T01:CDS |
| ACTGCTTGCAGGTTCTACCG+TGG | 0.707632 | 5:+15593957 | MsG0580025231.01.T01:intron |
| ATGCAGCAGAAGGCGCACGA+GGG | 0.753181 | 5:+15593846 | MsG0580025231.01.T01:CDS |
| ACTGAAGAAAGAGATCATGG+CGG | 0.814899 | 5:+15592417 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAAAAGATTAATTTTTTT+GGG | + | Chr5:15593185-15593204 | MsG0580025231.01.T01:intron | 10.0% |
| !!! | GTTTTATCATATTTAATTAA+TGG | + | Chr5:15593471-15593490 | MsG0580025231.01.T01:intron | 10.0% |
| !!! | TTTTTAAATATAAAGTTGTA+TGG | - | Chr5:15594064-15594083 | None:intergenic | 10.0% |
| !! | AAATACTGTAATACTTAATA+GGG | - | Chr5:15593526-15593545 | None:intergenic | 15.0% |
| !! | ATAAAAAATGTGGAAAAAAT+TGG | + | Chr5:15593246-15593265 | MsG0580025231.01.T01:intron | 15.0% |
| !! | ATATATTGTTACTAAACATT+AGG | - | Chr5:15592724-15592743 | None:intergenic | 15.0% |
| !! | ATGTTTAGTAACAATATATT+TGG | + | Chr5:15593085-15593104 | MsG0580025231.01.T01:intron | 15.0% |
| !! | ATTGTTACTAAACATATAAA+GGG | - | Chr5:15592774-15592793 | None:intergenic | 15.0% |
| !! | TAAAAAATGTGGAAAAAATT+GGG | + | Chr5:15593247-15593266 | MsG0580025231.01.T01:intron | 15.0% |
| !! | TATATTGTTACTAAACATTA+GGG | - | Chr5:15592723-15592742 | None:intergenic | 15.0% |
| !! | TATTGTTACTAAACATATAA+AGG | - | Chr5:15592775-15592794 | None:intergenic | 15.0% |
| !! | TTATCATATTTAATTAATGG+AGG | + | Chr5:15593474-15593493 | MsG0580025231.01.T01:intron | 15.0% |
| !! | TTGTTTGATTATTTAGAAAT+GGG | + | Chr5:15592641-15592660 | MsG0580025231.01.T01:intron | 15.0% |
| !! | TTTGTTTGATTATTTAGAAA+TGG | + | Chr5:15592640-15592659 | MsG0580025231.01.T01:intron | 15.0% |
| !!! | AGAAAAGATTAATTTTTTTG+GGG | + | Chr5:15593186-15593205 | MsG0580025231.01.T01:intron | 15.0% |
| !!! | GAAAAACATTAGTTTTTTTT+TGG | + | Chr5:15592955-15592974 | MsG0580025231.01.T01:intron | 15.0% |
| !!! | GAAGAAAAGATTAATTTTTT+TGG | + | Chr5:15593184-15593203 | MsG0580025231.01.T01:intron | 15.0% |
| !! | AAAAATCACTCAAACATAAA+GGG | - | Chr5:15593215-15593234 | None:intergenic | 20.0% |
| !! | AACAATATATGTGGAAAAAT+AGG | + | Chr5:15592734-15592753 | MsG0580025231.01.T01:intron | 20.0% |
| !! | AATCAAATGAAGAAAATTTC+CGG | - | Chr5:15594300-15594319 | None:intergenic | 20.0% |
| !! | ATAAATTGCTACTAAACAAT+AGG | - | Chr5:15592927-15592946 | None:intergenic | 20.0% |
| !! | ATACTAATGCATAAAAAATG+TGG | + | Chr5:15593236-15593255 | MsG0580025231.01.T01:intron | 20.0% |
| !! | ATGTTTAGTAACAATATATG+TGG | + | Chr5:15592725-15592744 | MsG0580025231.01.T01:intron | 20.0% |
| !! | GAAATACTGTAATACTTAAT+AGG | - | Chr5:15593527-15593546 | None:intergenic | 20.0% |
| !! | TAAATTGCTACTAAACAATA+GGG | - | Chr5:15592926-15592945 | None:intergenic | 20.0% |
| !! | TGTTTGATTATTTAGAAATG+GGG | + | Chr5:15592642-15592661 | MsG0580025231.01.T01:intron | 20.0% |
| !! | TTTGGTATCTTTATCATATT+CGG | + | Chr5:15594262-15594281 | MsG0580025231.01.T01:intron | 20.0% |
| !!! | ATGAAAAATCATTTTCACAA+AGG | - | Chr5:15593422-15593441 | None:intergenic | 20.0% |
| !!! | GTATTTTCTTATGAACATTA+GGG | - | Chr5:15593161-15593180 | None:intergenic | 20.0% |
| !!! | TGAAAAATCATTTTCACAAA+GGG | - | Chr5:15593421-15593440 | None:intergenic | 20.0% |
| !!! | TTGGATAAACAGTTTTTTTT+GGG | + | Chr5:15593104-15593123 | MsG0580025231.01.T01:intron | 20.0% |
| !!! | TTTGGATAAACAGTTTTTTT+TGG | + | Chr5:15593103-15593122 | MsG0580025231.01.T01:intron | 20.0% |
| ! | AAAATCACTCTCAAACATAA+AGG | - | Chr5:15592829-15592848 | None:intergenic | 25.0% |
| ! | AAATCACTCTCAAACATAAA+GGG | - | Chr5:15592828-15592847 | None:intergenic | 25.0% |
| ! | AAATCATACTCAAACACAAA+AGG | - | Chr5:15592696-15592715 | None:intergenic | 25.0% |
| ! | AATCATACTCAAACACAAAA+GGG | - | Chr5:15592695-15592714 | None:intergenic | 25.0% |
| ! | AATGTTCATAAGAAAATACG+TGG | + | Chr5:15593162-15593181 | MsG0580025231.01.T01:intron | 25.0% |
| ! | AATTCATTCTCATCCATAAA+AGG | - | Chr5:15593056-15593075 | None:intergenic | 25.0% |
| ! | ATTCATTCTCATCCATAAAA+GGG | - | Chr5:15593055-15593074 | None:intergenic | 25.0% |
| ! | CAAGAGATAATGAAATTACA+TGG | - | Chr5:15594011-15594030 | None:intergenic | 25.0% |
| ! | CAAGATCAATTCTAAACATT+AGG | - | Chr5:15593445-15593464 | None:intergenic | 25.0% |
| ! | CAATGTTGTCAAAAGAAAAA+AGG | + | Chr5:15594837-15594856 | MsG0580025231.01.T01:CDS | 25.0% |
| ! | CATACAGTTATATTATATGC+TGG | - | Chr5:15594144-15594163 | None:intergenic | 25.0% |
| ! | GAAAAATCACTCAAACATAA+AGG | - | Chr5:15593216-15593235 | None:intergenic | 25.0% |
| ! | GGTAAAGAAAGATTTCAATA+CGG | + | Chr5:15593867-15593886 | MsG0580025231.01.T01:intron | 25.0% |
| ! | GTGGGAAAATTGAATATTTA+TGG | + | Chr5:15593026-15593045 | MsG0580025231.01.T01:intron | 25.0% |
| ! | GTTTGATTATTTAGAAATGG+GGG | + | Chr5:15592643-15592662 | MsG0580025231.01.T01:intron | 25.0% |
| ! | TATGCTTAAAGATGTTTAGT+GGG | + | Chr5:15594160-15594179 | MsG0580025231.01.T01:intron | 25.0% |
| ! | TATTTAATCTTGCACTAGTT+TGG | + | Chr5:15594037-15594056 | MsG0580025231.01.T01:intron | 25.0% |
| ! | TGTTTAGTAGCAATTTATGT+GGG | + | Chr5:15592929-15592948 | MsG0580025231.01.T01:intron | 25.0% |
| ! | TTAACTTTCAAAACATCAAG+AGG | - | Chr5:15592544-15592563 | None:intergenic | 25.0% |
| ! | TTGTTTAGTAGCAATTTATG+TGG | + | Chr5:15592928-15592947 | MsG0580025231.01.T01:intron | 25.0% |
| !! | AAGTATTCAGCTTATTCTTT+TGG | + | Chr5:15594470-15594489 | MsG0580025231.01.T01:intron | 25.0% |
| !! | ATTTAATCTTGCACTAGTTT+GGG | + | Chr5:15594038-15594057 | MsG0580025231.01.T01:intron | 25.0% |
| !! | CGTATTTTCTTATGAACATT+AGG | - | Chr5:15593162-15593181 | None:intergenic | 25.0% |
| !! | TATTTATGGTTACCCTTTTA+TGG | + | Chr5:15593040-15593059 | MsG0580025231.01.T01:intron | 25.0% |
| !! | TGGTCTGTATGAATATTTTA+AGG | + | Chr5:15593649-15593668 | MsG0580025231.01.T01:CDS | 25.0% |
| !! | TTTCTCTTTGGTATATGTTT+TGG | + | Chr5:15594244-15594263 | MsG0580025231.01.T01:intron | 25.0% |
| !! | TTTTCAGCTAAAACATCTTT+AGG | - | Chr5:15594197-15594216 | None:intergenic | 25.0% |
| !!! | AACTTCTTTAAAACTAAGCA+TGG | + | Chr5:15594577-15594596 | MsG0580025231.01.T01:intron | 25.0% |
| !!! | GGTCTGTATGAATATTTTAA+GGG | + | Chr5:15593650-15593669 | MsG0580025231.01.T01:CDS | 25.0% |
| !!! | GTGGAAAAGTTGAAATTTTT+TGG | + | Chr5:15592869-15592888 | MsG0580025231.01.T01:intron | 25.0% |
| AAAATTTCCGGACATTAAGT+AGG | - | Chr5:15594288-15594307 | None:intergenic | 30.0% | |
| AAAGATGTTTAGTGGGAAAT+TGG | + | Chr5:15594167-15594186 | MsG0580025231.01.T01:intron | 30.0% | |
| AAATCATTCTCATCCATGAA+AGG | - | Chr5:15592899-15592918 | None:intergenic | 30.0% | |
| AACATAACTCTCAAGCATAA+AGG | - | Chr5:15592985-15593004 | None:intergenic | 30.0% | |
| AACTGTCCAACAAAAAAAAC+AGG | - | Chr5:15594767-15594786 | None:intergenic | 30.0% | |
| AAGACTCCTGGTAAATAAAT+TGG | - | Chr5:15595109-15595128 | None:intergenic | 30.0% | |
| ACATAACTCTCAAGCATAAA+GGG | - | Chr5:15592984-15593003 | None:intergenic | 30.0% | |
| ACTTGATTGATCAGGTTATA+GGG | + | Chr5:15594366-15594385 | MsG0580025231.01.T01:intron | 30.0% | |
| AGAGTTATGTTTCACACTAA+TGG | + | Chr5:15592994-15593013 | MsG0580025231.01.T01:intron | 30.0% | |
| AGCTATAAGTCTATAACTCA+TGG | + | Chr5:15594710-15594729 | MsG0580025231.01.T01:intron | 30.0% | |
| ATATACCAAAGAGAAAAGCA+AGG | - | Chr5:15594240-15594259 | None:intergenic | 30.0% | |
| ATGCTTTACTACGTTATTGA+GGG | + | Chr5:15593550-15593569 | MsG0580025231.01.T01:CDS | 30.0% | |
| ATTAGAAACAAAGCTACCAA+CGG | - | Chr5:15594923-15594942 | None:intergenic | 30.0% | |
| ATTGCGTTACACTTATTCTA+TGG | + | Chr5:15595058-15595077 | MsG0580025231.01.T01:intron | 30.0% | |
| CATGAAAACTATCTTTATGC+TGG | + | Chr5:15594093-15594112 | MsG0580025231.01.T01:intron | 30.0% | |
| GAAGATTTCACAAGATAGAA+TGG | - | Chr5:15594122-15594141 | None:intergenic | 30.0% | |
| GGTTAATACAGAACAAAATG+TGG | + | Chr5:15593373-15593392 | MsG0580025231.01.T01:intron | 30.0% | |
| GTATGCTTAAAGATGTTTAG+TGG | + | Chr5:15594159-15594178 | MsG0580025231.01.T01:intron | 30.0% | |
| TACTTGATTGATCAGGTTAT+AGG | + | Chr5:15594365-15594384 | MsG0580025231.01.T01:intron | 30.0% | |
| TGTTGTCAAAAGAAAAAAGG+AGG | + | Chr5:15594840-15594859 | MsG0580025231.01.T01:CDS | 30.0% | |
| ! | ACACTAATGGACAAAAAATG+TGG | + | Chr5:15593007-15593026 | MsG0580025231.01.T01:intron | 30.0% |
| ! | ACACTAATGGACAAAATATG+TGG | + | Chr5:15592850-15592869 | MsG0580025231.01.T01:intron | 30.0% |
| ! | ATTTGAAGCTGTTAAAGTCA+GGG | + | Chr5:15593769-15593788 | MsG0580025231.01.T01:CDS | 30.0% |
| ! | CACTAATGGACAAAAAATGT+GGG | + | Chr5:15593008-15593027 | MsG0580025231.01.T01:intron | 30.0% |
| ! | TACGACACTATCAAAGTTTT+AGG | + | Chr5:15595180-15595199 | MsG0580025231.01.T01:CDS | 30.0% |
| ! | TTCATGGATGAGAATGATTT+TGG | + | Chr5:15592899-15592918 | MsG0580025231.01.T01:intron | 30.0% |
| ! | TTGTTAGTTTATCAACCAAC+AGG | - | Chr5:15594401-15594420 | None:intergenic | 30.0% |
| !! | TTAGCTTTTATAAGCTAAGC+AGG | + | Chr5:15594445-15594464 | MsG0580025231.01.T01:intron | 30.0% |
| !!! | ATTTTTTGGCTAACCTTTCA+TGG | + | Chr5:15592883-15592902 | MsG0580025231.01.T01:intron | 30.0% |
| !!! | GAGTATCCTGTTTTTTTTGT+TGG | + | Chr5:15594758-15594777 | MsG0580025231.01.T01:intron | 30.0% |
| !!! | TGTTTTGAAAGTTAACATGC+AGG | + | Chr5:15592549-15592568 | MsG0580025231.01.T01:CDS | 30.0% |
| AAATACCAGAACAAGACTCT+CGG | - | Chr5:15594986-15595005 | None:intergenic | 35.0% | |
| AAATGGACACAGAGCTAAAT+TGG | - | Chr5:15593753-15593772 | None:intergenic | 35.0% | |
| AACCATTGCAAGGTTATAGA+AGG | - | Chr5:15595156-15595175 | None:intergenic | 35.0% | |
| AATATACAAGACTTCTGTGC+TGG | - | Chr5:15593700-15593719 | None:intergenic | 35.0% | |
| ACAAATTTCATCACCATCAC+AGG | - | Chr5:15594674-15594693 | None:intergenic | 35.0% | |
| ACCAATGATTGTTCCAGTTA+GGG | - | Chr5:15593289-15593308 | None:intergenic | 35.0% | |
| ACCATTGCAAGGTTATAGAA+GGG | - | Chr5:15595155-15595174 | None:intergenic | 35.0% | |
| AGCTGAACTCTTAGATTATC+AGG | + | Chr5:15593328-15593347 | MsG0580025231.01.T01:intron | 35.0% | |
| ATTATTTAGAAATGGGGGAG+TGG | + | Chr5:15592648-15592667 | MsG0580025231.01.T01:intron | 35.0% | |
| CACTATTACAACATAGTCAC+AGG | - | Chr5:15594520-15594539 | None:intergenic | 35.0% | |
| CATGCTTTACTACGTTATTG+AGG | + | Chr5:15593549-15593568 | MsG0580025231.01.T01:CDS | 35.0% | |
| CTGACTTTAACAGCTTCAAA+TGG | - | Chr5:15593770-15593789 | None:intergenic | 35.0% | |
| GAATGTTGAGAACATAACCA+TGG | - | Chr5:15594791-15594810 | None:intergenic | 35.0% | |
| GAGAAACTACTTGATTGATC+AGG | + | Chr5:15594358-15594377 | MsG0580025231.01.T01:intron | 35.0% | |
| GAGTGTTCAGTATATTCTTC+TGG | + | Chr5:15594601-15594620 | MsG0580025231.01.T01:intron | 35.0% | |
| GCTGAACTCTTAGATTATCA+GGG | + | Chr5:15593329-15593348 | MsG0580025231.01.T01:intron | 35.0% | |
| GTGGAAAACTTGACTATCTT+TGG | + | Chr5:15593392-15593411 | MsG0580025231.01.T01:intron | 35.0% | |
| TAGTAGCAATTTATGTGGGA+TGG | + | Chr5:15592933-15592952 | MsG0580025231.01.T01:intron | 35.0% | |
| TCTTCCTATTAGAATGTTGC+TGG | + | Chr5:15595125-15595144 | MsG0580025231.01.T01:CDS | 35.0% | |
| TTATTGTTAGTCACATGCTG+AGG | + | Chr5:15594332-15594351 | MsG0580025231.01.T01:intron | 35.0% | |
| ! | CATTTGAAGCTGTTAAAGTC+AGG | + | Chr5:15593768-15593787 | MsG0580025231.01.T01:CDS | 35.0% |
| ! | CTATTTTATGTACTGCTTGC+AGG | + | Chr5:15593946-15593965 | MsG0580025231.01.T01:intron | 35.0% |
| ! | GAGAGTGATTTTCACACTAA+TGG | + | Chr5:15592837-15592856 | MsG0580025231.01.T01:intron | 35.0% |
| ! | TTTTTGTTGGACAGTTTCCA+TGG | + | Chr5:15594771-15594790 | MsG0580025231.01.T01:intron | 35.0% |
| !!! | GACACTATCAAAGTTTTAGG+TGG | + | Chr5:15595183-15595202 | MsG0580025231.01.T01:CDS | 35.0% |
| !!! | TTTTTTTGGGCTACCCTTTT+AGG | + | Chr5:15593117-15593136 | MsG0580025231.01.T01:intron | 35.0% |
| AAATCACTCCCAGACCTAAA+AGG | - | Chr5:15593134-15593153 | None:intergenic | 40.0% | |
| AACATGCCCTTAGCATAACT+AGG | - | Chr5:15593806-15593825 | None:intergenic | 40.0% | |
| AATCACTCCCAGACCTAAAA+GGG | - | Chr5:15593133-15593152 | None:intergenic | 40.0% | |
| AATCTAAGAGTTCAGCTCAG+AGG | - | Chr5:15593325-15593344 | None:intergenic | 40.0% | |
| ACCCTAACTGGAACAATCAT+TGG | + | Chr5:15593285-15593304 | MsG0580025231.01.T01:intron | 40.0% | |
| ACTACGTTATTGAGGGAACA+AGG | + | Chr5:15593557-15593576 | MsG0580025231.01.T01:CDS | 40.0% | |
| AGCACAACCTAGTTATGCTA+AGG | + | Chr5:15593796-15593815 | MsG0580025231.01.T01:CDS | 40.0% | |
| CATTCTAATAGGAAGACTCC+TGG | - | Chr5:15595121-15595140 | None:intergenic | 40.0% | |
| CCAACCAGCAACATTCTAAT+AGG | - | Chr5:15595132-15595151 | None:intergenic | 40.0% | |
| CCTATTAGAATGTTGCTGGT+TGG | + | Chr5:15595129-15595148 | MsG0580025231.01.T01:CDS | 40.0% | |
| CGTTACACTTATTCTATGGC+AGG | + | Chr5:15595062-15595081 | MsG0580025231.01.T01:intron | 40.0% | |
| CTACGTTATTGAGGGAACAA+GGG | + | Chr5:15593558-15593577 | MsG0580025231.01.T01:CDS | 40.0% | |
| CTTGATGTGCATCTGTCTTT+AGG | + | Chr5:15593900-15593919 | MsG0580025231.01.T01:intron | 40.0% | |
| GAAGCTACTATATTGTCAGC+AGG | - | Chr5:15594946-15594965 | None:intergenic | 40.0% | |
| GACCAATGATTGTTCCAGTT+AGG | - | Chr5:15593290-15593309 | None:intergenic | 40.0% | |
| GCACAACCTAGTTATGCTAA+GGG | + | Chr5:15593797-15593816 | MsG0580025231.01.T01:CDS | 40.0% | |
| GGCAGGCTATCAGAAAAATT+GGG | + | Chr5:15595079-15595098 | MsG0580025231.01.T01:intron | 40.0% | |
| GGGAGTTTACTCCAATGTAT+TGG | + | Chr5:15593670-15593689 | MsG0580025231.01.T01:CDS | 40.0% | |
| GTCGTAGAAAAACCATTGCA+AGG | - | Chr5:15595166-15595185 | None:intergenic | 40.0% | |
| TATTATGCCCTTTGCACCAT+TGG | + | Chr5:15592478-15592497 | MsG0580025231.01.T01:CDS | 40.0% | |
| TATTCGGCCTACTTAATGTC+CGG | + | Chr5:15594278-15594297 | MsG0580025231.01.T01:intron | 40.0% | |
| TGCTTCTTTGCAACTGCATT+TGG | + | Chr5:15595005-15595024 | MsG0580025231.01.T01:intron | 40.0% | |
| TGGCAGGCTATCAGAAAAAT+TGG | + | Chr5:15595078-15595097 | MsG0580025231.01.T01:intron | 40.0% | |
| TGTTCAAAAGCTCAACAGCT+AGG | + | Chr5:15594865-15594884 | MsG0580025231.01.T01:CDS | 40.0% | |
| TTCTGACTAAGTTCCTGTGA+TGG | + | Chr5:15594658-15594677 | MsG0580025231.01.T01:intron | 40.0% | |
| TTCTGAGTTTGAACCCTAAC+TGG | + | Chr5:15593273-15593292 | MsG0580025231.01.T01:intron | 40.0% | |
| ! | GGCTAGCCAATTTATTTACC+AGG | + | Chr5:15595100-15595119 | MsG0580025231.01.T01:CDS | 40.0% |
| ! | TATGCTAAGGGCATGTTTGA+CGG | + | Chr5:15593809-15593828 | MsG0580025231.01.T01:CDS | 40.0% |
| !! | TTACGCCTTGCTTTTCTCTT+TGG | + | Chr5:15594232-15594251 | MsG0580025231.01.T01:intron | 40.0% |
| ACAGGCAAGTTCTTTGGCTA+TGG | + | Chr5:15593605-15593624 | MsG0580025231.01.T01:CDS | 45.0% | |
| AGGAGTTGTAGCAAGATGAG+TGG | - | Chr5:15592524-15592543 | None:intergenic | 45.0% | |
| ATAGGGCAGTAGTTACCTGT+TGG | + | Chr5:15594383-15594402 | MsG0580025231.01.T01:intron | 45.0% | |
| ATTATCAGGGCCGTTTCTCT+AGG | + | Chr5:15593342-15593361 | MsG0580025231.01.T01:intron | 45.0% | |
| CATGTTTGACGGCTTTCCAA+AGG | + | Chr5:15593820-15593839 | MsG0580025231.01.T01:CDS | 45.0% | |
| CATTCCTCCAATGGTGCAAA+GGG | - | Chr5:15592488-15592507 | None:intergenic | 45.0% | |
| CCAAAAGTGGAACAAGTCCA+CGG | - | Chr5:15593977-15593996 | None:intergenic | 45.0% | |
| CCTTCTGCTGCATATACCTT+TGG | - | Chr5:15593839-15593858 | None:intergenic | 45.0% | |
| CTAGGTGTGACATGTTTAGC+TGG | + | Chr5:15594883-15594902 | MsG0580025231.01.T01:CDS | 45.0% | |
| GAAGTGATGCTGTCACATGT+AGG | + | Chr5:15593496-15593515 | MsG0580025231.01.T01:intron | 45.0% | |
| GCCCTTCTATAACCTTGCAA+TGG | + | Chr5:15595151-15595170 | MsG0580025231.01.T01:CDS | 45.0% | |
| GCTCAAGGAGGATGTAGATT+TGG | + | Chr5:15593629-15593648 | MsG0580025231.01.T01:CDS | 45.0% | |
| GGAATGTTTCGACCCAAAAG+TGG | - | Chr5:15593990-15594009 | None:intergenic | 45.0% | |
| TCTCACAGGAATTAACGCCA+AGG | + | Chr5:15592455-15592474 | MsG0580025231.01.T01:CDS | 45.0% | |
| TGTTTAGCTGGTTATACCGC+TGG | + | Chr5:15594895-15594914 | MsG0580025231.01.T01:CDS | 45.0% | |
| TTCTTTGGCTATGGTGCTCA+AGG | + | Chr5:15593614-15593633 | MsG0580025231.01.T01:CDS | 45.0% | |
| ! | CCAAAGGTATATGCAGCAGA+AGG | + | Chr5:15593836-15593855 | MsG0580025231.01.T01:CDS | 45.0% |
| ! | GTGCAAAGGGCATAATACCT+TGG | - | Chr5:15592475-15592494 | None:intergenic | 45.0% |
| ! | GTGCTGGTCTACCAATACAT+TGG | - | Chr5:15593684-15593703 | None:intergenic | 45.0% |
| !! | AAAAGCCGAGAGTCTTGTTC+TGG | + | Chr5:15594978-15594997 | MsG0580025231.01.T01:CDS | 45.0% |
| !! | CGTGGACTTGTTCCACTTTT+GGG | + | Chr5:15593975-15593994 | MsG0580025231.01.T01:CDS | 45.0% |
| !! | AAAGAAATTAAATAAAAAAA+TGG | - | Chr5:15592593-15592612 | None:intergenic | 5.0% |
| AAAGCTACCAACGGATCCAG+CGG | - | Chr5:15594914-15594933 | None:intergenic | 50.0% | |
| ATTGGAGGAATGCTCAGTGC+TGG | + | Chr5:15592496-15592515 | MsG0580025231.01.T01:CDS | 50.0% | |
| CATCCTTTCCACAGGACAGA+AGG | - | Chr5:15593584-15593603 | None:intergenic | 50.0% | |
| CATGGAAGGAGGAATCTCAC+AGG | + | Chr5:15592441-15592460 | MsG0580025231.01.T01:CDS | 50.0% | |
| CCCTCCAGTTCCTAGAGAAA+CGG | - | Chr5:15593355-15593374 | None:intergenic | 50.0% | |
| CTGTGAGATTCCTCCTTCCA+TGG | - | Chr5:15592443-15592462 | None:intergenic | 50.0% | |
| CTTCTGTCCTGTGGAAAGGA+TGG | + | Chr5:15593582-15593601 | MsG0580025231.01.T01:CDS | 50.0% | |
| GCATTCCTCCAATGGTGCAA+AGG | - | Chr5:15592489-15592508 | None:intergenic | 50.0% | |
| GGATGGACAGGCAAGTTCTT+TGG | + | Chr5:15593599-15593618 | MsG0580025231.01.T01:CDS | 50.0% | |
| TATGCCCTTTGCACCATTGG+AGG | + | Chr5:15592481-15592500 | MsG0580025231.01.T01:CDS | 50.0% | |
| TTTGGCTATGGTGCTCAAGG+AGG | + | Chr5:15593617-15593636 | MsG0580025231.01.T01:CDS | 50.0% | |
| ! | AGCACTGAGCATTCCTCCAA+TGG | - | Chr5:15592497-15592516 | None:intergenic | 50.0% |
| ! | CCGTTTCTCTAGGAACTGGA+GGG | + | Chr5:15593352-15593371 | MsG0580025231.01.T01:intron | 50.0% |
| !! | CCGTGGACTTGTTCCACTTT+TGG | + | Chr5:15593974-15593993 | MsG0580025231.01.T01:CDS | 50.0% |
| !! | TGGGCTACCCTTTTAGGTCT+GGG | + | Chr5:15593123-15593142 | MsG0580025231.01.T01:intron | 50.0% |
| !! | TTGGGCTACCCTTTTAGGTC+TGG | + | Chr5:15593122-15593141 | MsG0580025231.01.T01:intron | 50.0% |
| AACAAGGGCCTTCTGTCCTG+TGG | + | Chr5:15593573-15593592 | MsG0580025231.01.T01:CDS | 55.0% | |
| ACTGCTTGCAGGTTCTACCG+TGG | + | Chr5:15593957-15593976 | MsG0580025231.01.T01:intron | 55.0% | |
| GAAAGAGATCATGGCGGCCA+TGG | + | Chr5:15592423-15592442 | MsG0580025231.01.T01:CDS | 55.0% | |
| GGTTATACCGCTGGATCCGT+TGG | + | Chr5:15594904-15594923 | MsG0580025231.01.T01:CDS | 55.0% | |
| GTCCTGTGGAAAGGATGGAC+AGG | + | Chr5:15593587-15593606 | MsG0580025231.01.T01:CDS | 55.0% | |
| TGCCTGTCCATCCTTTCCAC+AGG | - | Chr5:15593592-15593611 | None:intergenic | 55.0% | |
| ! | AGGGCCGTTTCTCTAGGAAC+TGG | + | Chr5:15593348-15593367 | MsG0580025231.01.T01:intron | 55.0% |
| ! | GCCGTTTCTCTAGGAACTGG+AGG | + | Chr5:15593351-15593370 | MsG0580025231.01.T01:intron | 55.0% |
| ATCATGGCGGCCATGGAAGG+AGG | + | Chr5:15592430-15592449 | MsG0580025231.01.T01:CDS | 60.0% | |
| GAGATCATGGCGGCCATGGA+AGG | + | Chr5:15592427-15592446 | MsG0580025231.01.T01:CDS | 60.0% | |
| GGGCCTTCTGTCCTGTGGAA+AGG | + | Chr5:15593578-15593597 | MsG0580025231.01.T01:CDS | 60.0% | |
| ! | ATGCAGCAGAAGGCGCACGA+GGG | + | Chr5:15593846-15593865 | MsG0580025231.01.T01:CDS | 60.0% |
| ! | TATGCAGCAGAAGGCGCACG+AGG | + | Chr5:15593845-15593864 | MsG0580025231.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 15592418 | 15595212 | 15592418 | ID=MsG0580025231.01;Name=MsG0580025231.01 |
| Chr5 | mRNA | 15592418 | 15595212 | 15592418 | ID=MsG0580025231.01.T01;Parent=MsG0580025231.01;Name=MsG0580025231.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0|1|1|1|5|0|296 |
| Chr5 | exon | 15592418 | 15592570 | 15592418 | ID=MsG0580025231.01.T01:exon:6257;Parent=MsG0580025231.01.T01 |
| Chr5 | exon | 15593518 | 15593867 | 15593518 | ID=MsG0580025231.01.T01:exon:6258;Parent=MsG0580025231.01.T01 |
| Chr5 | exon | 15593968 | 15594011 | 15593968 | ID=MsG0580025231.01.T01:exon:6259;Parent=MsG0580025231.01.T01 |
| Chr5 | exon | 15594785 | 15594999 | 15594785 | ID=MsG0580025231.01.T01:exon:6260;Parent=MsG0580025231.01.T01 |
| Chr5 | exon | 15595084 | 15595212 | 15595084 | ID=MsG0580025231.01.T01:exon:6261;Parent=MsG0580025231.01.T01 |
| Chr5 | CDS | 15592418 | 15592570 | 15592418 | ID=MsG0580025231.01.T01:cds;Parent=MsG0580025231.01.T01 |
| Chr5 | CDS | 15593518 | 15593867 | 15593518 | ID=MsG0580025231.01.T01:cds;Parent=MsG0580025231.01.T01 |
| Chr5 | CDS | 15593968 | 15594011 | 15593968 | ID=MsG0580025231.01.T01:cds;Parent=MsG0580025231.01.T01 |
| Chr5 | CDS | 15594785 | 15594999 | 15594785 | ID=MsG0580025231.01.T01:cds;Parent=MsG0580025231.01.T01 |
| Chr5 | CDS | 15595084 | 15595212 | 15595084 | ID=MsG0580025231.01.T01:cds;Parent=MsG0580025231.01.T01 |
| Gene Sequence |
| Protein sequence |
