Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040703.01.T01 | XP_013449838.1 | 95.109 | 184 | 9 | 0 | 18 | 201 | 18 | 201 | 3.41E-121 | 351 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040703.01.T01 | Q9C889 | 42.775 | 173 | 94 | 2 | 10 | 177 | 3 | 175 | 2.32E-41 | 141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040703.01.T01 | A0A072U3G2 | 95.109 | 184 | 9 | 0 | 18 | 201 | 18 | 201 | 1.63e-121 | 351 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0480021042.01 | MsG0780040703.01 | 0.816277 | 6.009083e-52 | 4.239350e-49 |
| MsG0480021859.01 | MsG0780040703.01 | 0.811331 | 7.386243e-51 | 4.558902e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0580029262.01 | MsG0780040703.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040703.01.T01 | MTR_7g096220 | 95.109 | 184 | 9 | 0 | 18 | 201 | 18 | 201 | 4.13e-125 | 351 |
| MsG0780040703.01.T01 | MTR_1g070480 | 56.784 | 199 | 79 | 3 | 3 | 201 | 2 | 193 | 1.80e-62 | 192 |
| MsG0780040703.01.T01 | MTR_5g083490 | 40.513 | 195 | 105 | 4 | 5 | 189 | 10 | 203 | 5.22e-39 | 133 |
| MsG0780040703.01.T01 | MTR_2g100260 | 45.333 | 150 | 76 | 2 | 32 | 176 | 30 | 178 | 5.28e-38 | 130 |
| MsG0780040703.01.T01 | MTR_1g080760 | 54.430 | 158 | 64 | 2 | 39 | 193 | 35 | 187 | 2.00e-36 | 126 |
| MsG0780040703.01.T01 | MTR_2g100270 | 49.133 | 173 | 84 | 2 | 10 | 178 | 3 | 175 | 1.28e-34 | 121 |
| MsG0780040703.01.T01 | MTR_4g014060 | 39.264 | 163 | 97 | 1 | 36 | 196 | 57 | 219 | 1.46e-34 | 122 |
| MsG0780040703.01.T01 | MTR_0562s0010 | 39.264 | 163 | 97 | 1 | 36 | 196 | 57 | 219 | 1.46e-34 | 122 |
| MsG0780040703.01.T01 | MTR_8g016150 | 48.765 | 162 | 81 | 2 | 11 | 170 | 5 | 166 | 4.25e-33 | 117 |
| MsG0780040703.01.T01 | MTR_6g092690 | 39.752 | 161 | 93 | 3 | 39 | 197 | 37 | 195 | 9.15e-33 | 117 |
| MsG0780040703.01.T01 | MTR_1g093090 | 38.854 | 157 | 93 | 2 | 36 | 189 | 20 | 176 | 1.00e-19 | 82.8 |
| MsG0780040703.01.T01 | MTR_3g012070 | 56.842 | 95 | 38 | 3 | 101 | 194 | 31 | 123 | 1.55e-19 | 82.4 |
| MsG0780040703.01.T01 | MTR_3g031070 | 36.879 | 141 | 87 | 1 | 38 | 176 | 28 | 168 | 1.92e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040703.01.T01 | AT1G55190 | 42.775 | 173 | 94 | 2 | 10 | 177 | 3 | 175 | 2.36e-42 | 141 |
| MsG0780040703.01.T01 | AT1G04260 | 40.361 | 166 | 99 | 0 | 30 | 195 | 12 | 177 | 2.97e-42 | 140 |
| MsG0780040703.01.T01 | AT1G08770 | 41.566 | 166 | 95 | 1 | 28 | 191 | 37 | 202 | 1.18e-39 | 135 |
| MsG0780040703.01.T01 | AT3G13720 | 41.040 | 173 | 97 | 2 | 10 | 177 | 3 | 175 | 2.89e-37 | 128 |
| MsG0780040703.01.T01 | AT5G07110 | 42.667 | 150 | 84 | 1 | 35 | 182 | 41 | 190 | 1.09e-36 | 127 |
| MsG0780040703.01.T01 | AT2G38360 | 38.095 | 189 | 105 | 5 | 12 | 189 | 19 | 206 | 1.25e-36 | 127 |
| MsG0780040703.01.T01 | AT3G13710 | 42.254 | 142 | 82 | 0 | 36 | 177 | 34 | 175 | 6.85e-36 | 124 |
| MsG0780040703.01.T01 | AT2G40380 | 44.805 | 154 | 82 | 2 | 38 | 189 | 46 | 198 | 8.75e-36 | 125 |
| MsG0780040703.01.T01 | AT5G01640 | 38.816 | 152 | 90 | 2 | 39 | 188 | 55 | 205 | 2.31e-35 | 124 |
| MsG0780040703.01.T01 | AT3G56110 | 41.060 | 151 | 87 | 1 | 36 | 184 | 42 | 192 | 3.26e-34 | 121 |
| MsG0780040703.01.T01 | AT3G56110 | 41.060 | 151 | 87 | 1 | 36 | 184 | 42 | 192 | 3.26e-34 | 121 |
| MsG0780040703.01.T01 | AT3G56110 | 41.060 | 151 | 87 | 1 | 36 | 184 | 42 | 192 | 3.26e-34 | 121 |
| MsG0780040703.01.T01 | AT3G56110 | 41.060 | 151 | 87 | 1 | 36 | 184 | 42 | 192 | 3.26e-34 | 121 |
| MsG0780040703.01.T01 | AT5G05380 | 43.709 | 151 | 83 | 1 | 36 | 184 | 45 | 195 | 5.41e-32 | 115 |
| MsG0780040703.01.T01 | AT1G17700 | 39.053 | 169 | 99 | 2 | 12 | 176 | 6 | 174 | 1.34e-31 | 113 |
| MsG0780040703.01.T01 | AT5G05380 | 43.709 | 151 | 83 | 1 | 36 | 184 | 88 | 238 | 1.42e-31 | 115 |
| MsG0780040703.01.T01 | AT5G05380 | 43.709 | 151 | 83 | 1 | 36 | 184 | 96 | 246 | 1.50e-31 | 115 |
| MsG0780040703.01.T01 | AT5G05380 | 43.709 | 151 | 83 | 1 | 36 | 184 | 112 | 262 | 3.15e-31 | 115 |
| MsG0780040703.01.T01 | AT4G29658 | 38.028 | 142 | 87 | 1 | 36 | 176 | 32 | 173 | 2.81e-24 | 94.7 |
| MsG0780040703.01.T01 | AT5G56230 | 32.450 | 151 | 101 | 1 | 36 | 185 | 33 | 183 | 1.12e-23 | 93.2 |
| MsG0780040703.01.T01 | AT1G55640 | 35.211 | 142 | 92 | 0 | 35 | 176 | 35 | 176 | 6.16e-23 | 91.3 |
| MsG0780040703.01.T01 | AT4G29658 | 37.963 | 108 | 66 | 1 | 70 | 176 | 3 | 110 | 2.84e-13 | 64.3 |
| MsG0780040703.01.T01 | AT4G00005 | 32.000 | 100 | 66 | 1 | 61 | 158 | 2 | 101 | 2.62e-11 | 58.9 |
Find 62 sgRNAs with CRISPR-Local
Find 71 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGGGCGTGAGATGAAATT+TGG | 0.290458 | 7:+81397603 | None:intergenic |
| GATTGCTTAATTCGTTTGTT+GGG | 0.318088 | 7:-81397125 | MsG0780040703.01.T01:CDS |
| AAAATAAAGAACCTATATTA+AGG | 0.327117 | 7:+81397071 | None:intergenic |
| CGCGTGGCGGAGAGGGGTTT+TGG | 0.349042 | 7:+81397576 | None:intergenic |
| GGATTGCTTAATTCGTTTGT+TGG | 0.355051 | 7:-81397126 | MsG0780040703.01.T01:CDS |
| GTGGCTTCGGTGAGAGAGTA+TGG | 0.355861 | 7:+81397510 | None:intergenic |
| TCTCCGCCACGCGCCGTCCA+TGG | 0.370614 | 7:-81397566 | MsG0780040703.01.T01:CDS |
| TTGGGTGAATGTGTTGGTTT+CGG | 0.377231 | 7:-81397238 | MsG0780040703.01.T01:CDS |
| TGGACGGCGCGTGGCGGAGA+GGG | 0.393049 | 7:+81397569 | None:intergenic |
| GAATGTGTTGGTTTCGGTTG+TGG | 0.404968 | 7:-81397232 | MsG0780040703.01.T01:CDS |
| TTGTGTTGCATGGTGCGTTT+AGG | 0.406968 | 7:-81397194 | MsG0780040703.01.T01:CDS |
| GACGAACCGATTGTTCTGTT+TGG | 0.413004 | 7:-81397336 | MsG0780040703.01.T01:CDS |
| CTTCACGCGCGAGGTGGCTT+CGG | 0.424427 | 7:+81397497 | None:intergenic |
| TCTTGATCACACTGATAGCT+TGG | 0.436154 | 7:-81397380 | MsG0780040703.01.T01:CDS |
| CTCCGCCACGCGCCGTCCAT+GGG | 0.449853 | 7:-81397565 | MsG0780040703.01.T01:CDS |
| GGAGGAATGGAATTTGATGA+TGG | 0.455858 | 7:+81397624 | None:intergenic |
| TTCGGTTGTGGTTGGTGTTG+TGG | 0.456074 | 7:-81397220 | MsG0780040703.01.T01:CDS |
| GTTGTGGTTGTTGTGTTGCA+TGG | 0.460537 | 7:-81397204 | MsG0780040703.01.T01:CDS |
| TTCTGCGGCGGTGCTTGCGG+CGG | 0.469986 | 7:-81397292 | MsG0780040703.01.T01:CDS |
| AAGAAGACGATGATTGAGAT+AGG | 0.475530 | 7:+81397399 | None:intergenic |
| ACCCCTACAAAACGTGGTGC+AGG | 0.490203 | 7:-81397099 | MsG0780040703.01.T01:CDS |
| AGCTTCTGCGGCGGTGCTTG+CGG | 0.491539 | 7:-81397295 | MsG0780040703.01.T01:CDS |
| TGGTGTTTGGGTGAATGTGT+TGG | 0.494101 | 7:-81397244 | MsG0780040703.01.T01:CDS |
| TGAGATGAAATTTGGAGGAA+TGG | 0.499497 | 7:+81397611 | None:intergenic |
| GGAATAAGACGAAGAGGATG+AGG | 0.506318 | 7:+81397439 | None:intergenic |
| ACACGGCCAAACAGAACAAT+CGG | 0.514431 | 7:+81397330 | None:intergenic |
| ATTGCTTAATTCGTTTGTTG+GGG | 0.514787 | 7:-81397124 | MsG0780040703.01.T01:CDS |
| TCTTATTCCTCAGTCTCCTA+TGG | 0.515363 | 7:-81397425 | MsG0780040703.01.T01:CDS |
| TGATGTAGTTTACGCGGAAG+TGG | 0.516897 | 7:+81397463 | None:intergenic |
| ATGGACGGCGCGTGGCGGAG+AGG | 0.522247 | 7:+81397568 | None:intergenic |
| GTGTTGGTTTCGGTTGTGGT+TGG | 0.533999 | 7:-81397228 | MsG0780040703.01.T01:CDS |
| GATGAACATGAAGGGTATGA+TGG | 0.534737 | 7:-81397150 | MsG0780040703.01.T01:CDS |
| GAGTACAGAGGATTTGTATG+TGG | 0.534977 | 7:-81397172 | MsG0780040703.01.T01:CDS |
| GGACGGCGCGTGGCGGAGAG+GGG | 0.537542 | 7:+81397570 | None:intergenic |
| TTCTTCCCATGGACGGCGCG+TGG | 0.540922 | 7:+81397560 | None:intergenic |
| GAGGAATGGAATTTGATGAT+GGG | 0.542880 | 7:+81397625 | None:intergenic |
| TGCAGGGTATACCTTAATAT+AGG | 0.553653 | 7:-81397082 | None:intergenic |
| GGGCGTGAGATGAAATTTGG+AGG | 0.564375 | 7:+81397606 | None:intergenic |
| TTCCCATGGACGGCGCGTGG+CGG | 0.568324 | 7:+81397563 | None:intergenic |
| GAACATGAAGGGTATGATGG+AGG | 0.570438 | 7:-81397147 | MsG0780040703.01.T01:CDS |
| GGTGCTTGCGGCGGTGACTG+TGG | 0.576471 | 7:-81397283 | MsG0780040703.01.T01:CDS |
| GTTACGCTTCACGCGCGAGG+TGG | 0.594481 | 7:+81397491 | None:intergenic |
| GAGAGAGTATGGACGTGTGA+AGG | 0.602366 | 7:+81397521 | None:intergenic |
| AGTGCGAAAACTTCTTCCCA+TGG | 0.611042 | 7:+81397549 | None:intergenic |
| GACTGAGGAATAAGACGAAG+AGG | 0.612998 | 7:+81397433 | None:intergenic |
| TTGTATGTGGATGAACATGA+AGG | 0.615757 | 7:-81397159 | MsG0780040703.01.T01:CDS |
| TGATTGAGATAGGATGCCAT+AGG | 0.623237 | 7:+81397409 | None:intergenic |
| CGAAAACTTCTTCCCATGGA+CGG | 0.634534 | 7:+81397553 | None:intergenic |
| TAGGATGCCATAGGAGACTG+AGG | 0.641152 | 7:+81397418 | None:intergenic |
| GATGTTACGCTTCACGCGCG+AGG | 0.644346 | 7:+81397488 | None:intergenic |
| CCCCTACAAAACGTGGTGCA+GGG | 0.646335 | 7:-81397098 | MsG0780040703.01.T01:CDS |
| ACAGAACAATCGGTTCGTCA+CGG | 0.650504 | 7:+81397340 | None:intergenic |
| AAGCTCTATCATCGACAACA+CGG | 0.654426 | 7:+81397313 | None:intergenic |
| GCTTGCGGCGGTGACTGTGG+TGG | 0.673252 | 7:-81397280 | MsG0780040703.01.T01:CDS |
| TTGCTTAATTCGTTTGTTGG+GGG | 0.680040 | 7:-81397123 | MsG0780040703.01.T01:CDS |
| GGGAGAGAACTGTAATGAGG+TGG | 0.684799 | 7:+81397645 | None:intergenic |
| TGTCGATGATAGAGCTTCTG+CGG | 0.689430 | 7:-81397307 | MsG0780040703.01.T01:CDS |
| GATGGGAGAGAACTGTAATG+AGG | 0.691558 | 7:+81397642 | None:intergenic |
| TGAGGATGATGTAGTTTACG+CGG | 0.702002 | 7:+81397457 | None:intergenic |
| CGATGATAGAGCTTCTGCGG+CGG | 0.707409 | 7:-81397304 | MsG0780040703.01.T01:CDS |
| TGGTGCGTTTAGGAGTACAG+AGG | 0.718243 | 7:-81397184 | MsG0780040703.01.T01:CDS |
| TGTATGTGGATGAACATGAA+GGG | 0.731483 | 7:-81397158 | MsG0780040703.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GATTGCTTAATTCGTTTGTT+GGG | - | Chr7:81397624-81397643 | MsG0780040703.01.T01:CDS | 30.0% | |
| ! | ATTGCTTAATTCGTTTGTTG+GGG | - | Chr7:81397625-81397644 | MsG0780040703.01.T01:CDS | 30.0% |
| AAGAAGACGATGATTGAGAT+AGG | + | Chr7:81397353-81397372 | None:intergenic | 35.0% | |
| GGATTGCTTAATTCGTTTGT+TGG | - | Chr7:81397623-81397642 | MsG0780040703.01.T01:CDS | 35.0% | |
| TGAGATGAAATTTGGAGGAA+TGG | + | Chr7:81397141-81397160 | None:intergenic | 35.0% | |
| TGTATGTGGATGAACATGAA+GGG | - | Chr7:81397591-81397610 | MsG0780040703.01.T01:CDS | 35.0% | |
| TTGTATGTGGATGAACATGA+AGG | - | Chr7:81397590-81397609 | MsG0780040703.01.T01:CDS | 35.0% | |
| ! | GAGGAATGGAATTTGATGAT+GGG | + | Chr7:81397127-81397146 | None:intergenic | 35.0% |
| ! | TTGCTTAATTCGTTTGTTGG+GGG | - | Chr7:81397626-81397645 | MsG0780040703.01.T01:CDS | 35.0% |
| !!! | GTTAGCTTTTACTGGTGTTT+GGG | - | Chr7:81397493-81397512 | MsG0780040703.01.T01:CDS | 35.0% |
| AAGCTCTATCATCGACAACA+CGG | + | Chr7:81397439-81397458 | None:intergenic | 40.0% | |
| GAGTACAGAGGATTTGTATG+TGG | - | Chr7:81397577-81397596 | MsG0780040703.01.T01:CDS | 40.0% | |
| GGAGGAATGGAATTTGATGA+TGG | + | Chr7:81397128-81397147 | None:intergenic | 40.0% | |
| TCTTATTCCTCAGTCTCCTA+TGG | - | Chr7:81397324-81397343 | MsG0780040703.01.T01:CDS | 40.0% | |
| TCTTGATCACACTGATAGCT+TGG | - | Chr7:81397369-81397388 | MsG0780040703.01.T01:CDS | 40.0% | |
| TGAGGATGATGTAGTTTACG+CGG | + | Chr7:81397295-81397314 | None:intergenic | 40.0% | |
| TGATTGAGATAGGATGCCAT+AGG | + | Chr7:81397343-81397362 | None:intergenic | 40.0% | |
| ! | GATGAACATGAAGGGTATGA+TGG | - | Chr7:81397599-81397618 | MsG0780040703.01.T01:CDS | 40.0% |
| !! | TTGGGTGAATGTGTTGGTTT+CGG | - | Chr7:81397511-81397530 | MsG0780040703.01.T01:CDS | 40.0% |
| !!! | CGTTAGCTTTTACTGGTGTT+TGG | - | Chr7:81397492-81397511 | MsG0780040703.01.T01:CDS | 40.0% |
| ACACGGCCAAACAGAACAAT+CGG | + | Chr7:81397422-81397441 | None:intergenic | 45.0% | |
| AGTGCGAAAACTTCTTCCCA+TGG | + | Chr7:81397203-81397222 | None:intergenic | 45.0% | |
| CGAAAACTTCTTCCCATGGA+CGG | + | Chr7:81397199-81397218 | None:intergenic | 45.0% | |
| GACGAACCGATTGTTCTGTT+TGG | - | Chr7:81397413-81397432 | MsG0780040703.01.T01:CDS | 45.0% | |
| GACTGAGGAATAAGACGAAG+AGG | + | Chr7:81397319-81397338 | None:intergenic | 45.0% | |
| GATGGGAGAGAACTGTAATG+AGG | + | Chr7:81397110-81397129 | None:intergenic | 45.0% | |
| GGAATAAGACGAAGAGGATG+AGG | + | Chr7:81397313-81397332 | None:intergenic | 45.0% | |
| GTTGTGGTTGTTGTGTTGCA+TGG | - | Chr7:81397545-81397564 | MsG0780040703.01.T01:CDS | 45.0% | |
| TGATGTAGTTTACGCGGAAG+TGG | + | Chr7:81397289-81397308 | None:intergenic | 45.0% | |
| TGGTGTTTGGGTGAATGTGT+TGG | - | Chr7:81397505-81397524 | MsG0780040703.01.T01:CDS | 45.0% | |
| TGTCGATGATAGAGCTTCTG+CGG | - | Chr7:81397442-81397461 | MsG0780040703.01.T01:CDS | 45.0% | |
| TTGTGTTGCATGGTGCGTTT+AGG | - | Chr7:81397555-81397574 | MsG0780040703.01.T01:CDS | 45.0% | |
| ! | GAACATGAAGGGTATGATGG+AGG | - | Chr7:81397602-81397621 | MsG0780040703.01.T01:CDS | 45.0% |
| !! | ACAGAACAATCGGTTCGTCA+CGG | + | Chr7:81397412-81397431 | None:intergenic | 45.0% |
| !! | GAATGTGTTGGTTTCGGTTG+TGG | - | Chr7:81397517-81397536 | MsG0780040703.01.T01:CDS | 45.0% |
| GGGAGAGAACTGTAATGAGG+TGG | + | Chr7:81397107-81397126 | None:intergenic | 50.0% | |
| GGGCGTGAGATGAAATTTGG+AGG | + | Chr7:81397146-81397165 | None:intergenic | 50.0% | |
| GTGGGGCGTGAGATGAAATT+TGG | + | Chr7:81397149-81397168 | None:intergenic | 50.0% | |
| TAGGATGCCATAGGAGACTG+AGG | + | Chr7:81397334-81397353 | None:intergenic | 50.0% | |
| ! | ACCCTGCACCACGTTTTGTA+GGG | + | Chr7:81397655-81397674 | None:intergenic | 50.0% |
| ! | GAGAGAGTATGGACGTGTGA+AGG | + | Chr7:81397231-81397250 | None:intergenic | 50.0% |
| ! | TACCCTGCACCACGTTTTGT+AGG | + | Chr7:81397656-81397675 | None:intergenic | 50.0% |
| ! | TGGTGCGTTTAGGAGTACAG+AGG | - | Chr7:81397565-81397584 | MsG0780040703.01.T01:CDS | 50.0% |
| !! | GTGTTGGTTTCGGTTGTGGT+TGG | - | Chr7:81397521-81397540 | MsG0780040703.01.T01:CDS | 50.0% |
| !! | TTCGGTTGTGGTTGGTGTTG+TGG | - | Chr7:81397529-81397548 | MsG0780040703.01.T01:CDS | 50.0% |
| !!! | GTGGTGGCGTTAGCTTTTAC+TGG | - | Chr7:81397485-81397504 | MsG0780040703.01.T01:CDS | 50.0% |
| ACCCCTACAAAACGTGGTGC+AGG | - | Chr7:81397650-81397669 | MsG0780040703.01.T01:CDS | 55.0% | |
| CCCCTACAAAACGTGGTGCA+GGG | - | Chr7:81397651-81397670 | MsG0780040703.01.T01:CDS | 55.0% | |
| CGATGATAGAGCTTCTGCGG+CGG | - | Chr7:81397445-81397464 | MsG0780040703.01.T01:CDS | 55.0% | |
| GTGGCTTCGGTGAGAGAGTA+TGG | + | Chr7:81397242-81397261 | None:intergenic | 55.0% | |
| ! | CCCTGCACCACGTTTTGTAG+GGG | + | Chr7:81397654-81397673 | None:intergenic | 55.0% |
| !! | AGAGGGGTTTTGGTGTGGTG+GGG | + | Chr7:81397166-81397185 | None:intergenic | 55.0% |
| !! | GAGAGGGGTTTTGGTGTGGT+GGG | + | Chr7:81397167-81397186 | None:intergenic | 55.0% |
| GATGTTACGCTTCACGCGCG+AGG | + | Chr7:81397264-81397283 | None:intergenic | 60.0% | |
| !! | GGAGAGGGGTTTTGGTGTGG+TGG | + | Chr7:81397168-81397187 | None:intergenic | 60.0% |
| !! | GGGGGTACCCCTACAAAACG+TGG | - | Chr7:81397644-81397663 | MsG0780040703.01.T01:CDS | 60.0% |
| AGCTTCTGCGGCGGTGCTTG+CGG | - | Chr7:81397454-81397473 | MsG0780040703.01.T01:CDS | 65.0% | |
| CTTCACGCGCGAGGTGGCTT+CGG | + | Chr7:81397255-81397274 | None:intergenic | 65.0% | |
| GTTACGCTTCACGCGCGAGG+TGG | + | Chr7:81397261-81397280 | None:intergenic | 65.0% | |
| TTCTTCCCATGGACGGCGCG+TGG | + | Chr7:81397192-81397211 | None:intergenic | 65.0% | |
| !! | GGCGGAGAGGGGTTTTGGTG+TGG | + | Chr7:81397171-81397190 | None:intergenic | 65.0% |
| GCTTGCGGCGGTGACTGTGG+TGG | - | Chr7:81397469-81397488 | MsG0780040703.01.T01:CDS | 70.0% | |
| GGTGCTTGCGGCGGTGACTG+TGG | - | Chr7:81397466-81397485 | MsG0780040703.01.T01:CDS | 70.0% | |
| TTCCCATGGACGGCGCGTGG+CGG | + | Chr7:81397189-81397208 | None:intergenic | 70.0% | |
| TTCTGCGGCGGTGCTTGCGG+CGG | - | Chr7:81397457-81397476 | MsG0780040703.01.T01:CDS | 70.0% | |
| !! | CGCGTGGCGGAGAGGGGTTT+TGG | + | Chr7:81397176-81397195 | None:intergenic | 70.0% |
| CTCCGCCACGCGCCGTCCAT+GGG | - | Chr7:81397184-81397203 | MsG0780040703.01.T01:CDS | 75.0% | |
| TCTCCGCCACGCGCCGTCCA+TGG | - | Chr7:81397183-81397202 | MsG0780040703.01.T01:CDS | 75.0% | |
| ! | ATGGACGGCGCGTGGCGGAG+AGG | + | Chr7:81397184-81397203 | None:intergenic | 75.0% |
| ! | TGGACGGCGCGTGGCGGAGA+GGG | + | Chr7:81397183-81397202 | None:intergenic | 75.0% |
| !! | GGACGGCGCGTGGCGGAGAG+GGG | + | Chr7:81397182-81397201 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 81397083 | 81397688 | 81397083 | ID=MsG0780040703.01;Name=MsG0780040703.01 |
| Chr7 | mRNA | 81397083 | 81397688 | 81397083 | ID=MsG0780040703.01.T01;Parent=MsG0780040703.01;Name=MsG0780040703.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|201 |
| Chr7 | exon | 81397083 | 81397688 | 81397083 | ID=MsG0780040703.01.T01:exon:17730;Parent=MsG0780040703.01.T01 |
| Chr7 | CDS | 81397083 | 81397688 | 81397083 | ID=MsG0780040703.01.T01:cds;Parent=MsG0780040703.01.T01 |
| Gene Sequence |
| Protein sequence |
