AlfalfaGEDB | MsG0780041150.01

M. sativa cultivar ZhongmuNo.1 / MsG0780041150.01

KEGG: -
GO: GO:0003677 GO:0006355
PFAM: PF02365

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041150.01.T01	XP_013450122.1	95.455	198	7	2	1	196	60	257	2.41E-137	394

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041150.01.T01	Q9FMR3	45.745	188	86	3	3	190	63	234	5.98E-51	167

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041150.01.T01	A0A072UEA7	95.455	198	7	2	1	196	60	257	1.15e-137	394

TFs/TRs:

Gene ID	Type	Classification
MsG0780041150.01.T01	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0280006839.01	MsG0780041150.01	0.872811	2.387646e-67	1.012758e-63

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041150.01.T01	MTR_7g105170	95.455	198	7	2	1	196	60	257	2.92e-141	394
MsG0780041150.01.T01	MTR_2g086690	46.734	199	85	6	3	191	62	249	3.03e-55	176
MsG0780041150.01.T01	MTR_4g052620	66.102	118	38	1	3	120	62	177	1.17e-52	169
MsG0780041150.01.T01	MTR_4g075980	43.750	112	51	3	6	115	70	171	1.29e-26	103
MsG0780041150.01.T01	MTR_8g094580	35.404	161	96	5	5	162	7	162	5.67e-25	97.4
MsG0780041150.01.T01	MTR_8g094580	35.404	161	96	5	5	162	61	216	1.89e-24	97.4
MsG0780041150.01.T01	MTR_4g134460	46.078	102	48	2	5	106	108	202	5.58e-24	98.2
MsG0780041150.01.T01	MTR_6g012670	41.284	109	60	2	5	113	74	178	7.58e-24	96.3
MsG0780041150.01.T01	MTR_2g093810	46.296	108	54	3	5	110	68	173	3.43e-23	94.7
MsG0780041150.01.T01	MTR_3g064580	36.429	140	77	4	6	145	63	190	8.13e-23	95.5
MsG0780041150.01.T01	MTR_5g041940	39.815	108	63	2	6	113	58	163	9.81e-23	92.4
MsG0780041150.01.T01	MTR_8g467490	30.319	188	118	7	5	180	68	254	1.65e-22	93.6
MsG0780041150.01.T01	MTR_4g036030	35.185	162	79	6	6	165	65	202	1.73e-22	93.2
MsG0780041150.01.T01	MTR_6g011860	37.838	111	61	2	5	109	69	177	2.17e-22	93.2
MsG0780041150.01.T01	MTR_4g081870	40.909	110	63	2	6	115	64	171	2.20e-22	91.7
MsG0780041150.01.T01	MTR_8g059170	42.157	102	55	3	5	106	68	165	2.72e-22	92.4
MsG0780041150.01.T01	MTR_5g076850	45.192	104	51	3	6	109	63	160	2.72e-22	94.0
MsG0780041150.01.T01	MTR_2g079990	38.655	119	63	4	5	123	70	178	4.57e-22	92.0
MsG0780041150.01.T01	MTR_6g477900	45.714	105	50	4	2	106	60	157	1.09e-21	89.0
MsG0780041150.01.T01	MTR_7g085220	35.714	140	79	3	5	136	62	198	1.32e-21	90.5
MsG0780041150.01.T01	MTR_2157s0010	32.749	171	106	3	1	162	58	228	2.33e-21	89.0
MsG0780041150.01.T01	MTR_3g096140	33.108	148	85	4	6	153	64	197	4.09e-21	88.2
MsG0780041150.01.T01	MTR_5g040420	38.679	106	61	2	5	106	68	173	5.87e-21	89.4
MsG0780041150.01.T01	MTR_3g096140	33.108	148	85	4	6	153	43	176	9.06e-21	88.2
MsG0780041150.01.T01	MTR_3g096140	33.108	148	85	4	6	153	64	197	1.05e-20	88.2
MsG0780041150.01.T01	MTR_3g093050	43.689	103	48	3	6	106	79	173	1.53e-20	89.0
MsG0780041150.01.T01	MTR_3g093050	43.689	103	48	3	6	106	79	173	1.62e-20	89.0
MsG0780041150.01.T01	MTR_2g064090	40.594	101	55	2	6	106	63	158	1.70e-20	87.8
MsG0780041150.01.T01	MTR_4g089135	37.190	121	57	2	5	106	69	189	1.75e-20	87.8
MsG0780041150.01.T01	MTR_3g070030	40.741	108	61	2	6	113	74	178	2.29e-20	87.4
MsG0780041150.01.T01	MTR_7g100990	41.667	108	61	2	5	111	65	171	2.78e-20	87.0
MsG0780041150.01.T01	MTR_1g097300	47.059	102	46	4	6	106	76	170	5.24e-20	87.4
MsG0780041150.01.T01	MTR_3g093040	41.748	103	50	3	6	106	165	259	6.09e-20	85.9
MsG0780041150.01.T01	MTR_3g096920	34.711	121	73	3	5	124	61	176	7.43e-20	85.1
MsG0780041150.01.T01	MTR_5g012080	32.903	155	76	4	6	158	65	193	8.27e-20	85.9
MsG0780041150.01.T01	MTR_1g096430	42.000	100	50	2	6	105	65	156	8.75e-20	85.5
MsG0780041150.01.T01	MTR_1g090720	42.718	103	57	2	5	106	98	199	1.15e-19	86.3
MsG0780041150.01.T01	MTR_2g062730	38.318	107	59	2	6	112	68	167	1.22e-19	85.5
MsG0780041150.01.T01	MTR_3g109340	41.748	103	53	3	5	106	76	172	2.18e-19	84.7
MsG0780041150.01.T01	MTR_8g076110	37.736	106	58	2	6	111	64	161	2.69e-19	84.0
MsG0780041150.01.T01	MTR_2g080010	32.778	180	77	5	5	177	69	211	2.71e-19	84.3
MsG0780041150.01.T01	MTR_3g435150	40.196	102	57	2	5	106	70	167	2.91e-19	83.6
MsG0780041150.01.T01	MTR_8g024480	38.596	114	59	4	7	113	74	183	3.17e-19	84.7
MsG0780041150.01.T01	MTR_3g109340	41.748	103	52	3	5	106	76	171	3.64e-19	84.0
MsG0780041150.01.T01	MTR_3g088110	38.095	105	61	3	5	109	61	161	4.32e-19	83.2
MsG0780041150.01.T01	MTR_7g011120	40.179	112	61	4	1	108	59	168	5.31e-19	83.2
MsG0780041150.01.T01	MTR_4g108760	38.235	102	59	2	5	106	71	168	5.63e-19	83.6
MsG0780041150.01.T01	MTR_1g008740	39.091	110	60	3	4	112	81	184	6.18e-19	83.6
MsG0780041150.01.T01	MTR_5g069030	41.176	102	50	3	6	105	82	175	6.32e-19	84.3
MsG0780041150.01.T01	MTR_1g008740	39.091	110	60	3	4	112	67	170	6.62e-19	83.2
MsG0780041150.01.T01	MTR_2g079990	30.282	142	71	3	5	123	70	206	1.06e-18	83.2
MsG0780041150.01.T01	MTR_2g086880	52.857	70	32	1	6	75	74	142	2.30e-18	82.8
MsG0780041150.01.T01	MTR_7g011130	37.815	119	60	4	1	108	70	185	2.69e-18	81.6
MsG0780041150.01.T01	MTR_5g021710	39.000	100	53	2	6	105	66	157	2.88e-18	81.6
MsG0780041150.01.T01	MTR_5g014300	41.964	112	50	4	2	107	60	162	2.89e-18	81.3
MsG0780041150.01.T01	MTR_2g086880	52.857	70	32	1	6	75	74	142	3.63e-18	82.0
MsG0780041150.01.T01	MTR_4g101680	38.384	99	53	2	7	105	66	156	5.32e-18	80.9
MsG0780041150.01.T01	MTR_6g032770	37.383	107	62	3	1	106	69	171	9.47e-18	80.5
MsG0780041150.01.T01	MTR_3g070040	42.697	89	49	2	20	108	74	160	1.57e-17	79.3
MsG0780041150.01.T01	MTR_8g099750	38.614	101	61	1	3	102	64	164	1.99e-17	77.4
MsG0780041150.01.T01	MTR_2g078700	38.835	103	59	2	5	106	77	176	2.02e-17	79.3
MsG0780041150.01.T01	MTR_7g005280	39.252	107	56	4	3	107	63	162	4.15e-17	77.0
MsG0780041150.01.T01	MTR_1g069805	36.792	106	57	3	3	107	62	158	8.69e-17	76.6
MsG0780041150.01.T01	MTR_7g085260	36.190	105	61	2	5	106	71	172	8.83e-17	77.8
MsG0780041150.01.T01	MTR_3g096920	39.506	81	47	1	5	85	61	139	1.23e-16	77.0
MsG0780041150.01.T01	MTR_3g116070	48.611	72	36	1	6	76	79	150	1.62e-16	76.6
MsG0780041150.01.T01	MTR_4g098630	39.815	108	57	3	2	107	60	161	2.19e-16	75.9
MsG0780041150.01.T01	MTR_4g035590	37.143	105	57	3	6	110	66	161	2.49e-16	76.3
MsG0780041150.01.T01	MTR_6g084430	36.275	102	57	2	5	106	59	152	2.51e-16	75.9
MsG0780041150.01.T01	MTR_2g064470	33.628	113	67	4	5	117	63	167	4.85e-16	75.1
MsG0780041150.01.T01	MTR_7g070140	42.308	78	43	2	1	76	13	90	5.30e-16	71.6
MsG0780041150.01.T01	MTR_8g063550	33.000	100	61	3	6	105	63	156	7.20e-16	75.1
MsG0780041150.01.T01	MTR_8g063550	33.000	100	61	3	6	105	63	156	7.69e-16	74.7
MsG0780041150.01.T01	MTR_8g093580	33.000	100	61	3	6	105	63	156	8.51e-16	75.1
MsG0780041150.01.T01	MTR_8g063550	33.000	100	61	3	6	105	63	156	8.88e-16	75.1
MsG0780041150.01.T01	MTR_1g090723	37.143	105	59	4	2	106	63	160	2.28e-15	73.9
MsG0780041150.01.T01	MTR_1g090723	37.143	105	58	4	2	106	63	159	2.66e-15	73.9
MsG0780041150.01.T01	MTR_1g090723	37.143	105	58	4	2	106	63	159	2.78e-15	73.9
MsG0780041150.01.T01	MTR_8g023900	34.615	104	56	3	3	105	248	340	6.29e-15	72.8
MsG0780041150.01.T01	MTR_8g023900	34.579	107	58	4	3	107	67	163	6.27e-12	63.9
MsG0780041150.01.T01	MTR_8g023860	36.634	101	52	3	3	102	67	156	6.52e-15	72.4
MsG0780041150.01.T01	MTR_0036s0150	33.663	101	60	2	6	106	63	156	9.12e-15	72.4
MsG0780041150.01.T01	MTR_2g068880	30.464	151	86	5	8	146	80	223	1.25e-14	71.2
MsG0780041150.01.T01	MTR_7g097090	36.275	102	55	3	3	103	62	154	1.27e-14	70.9
MsG0780041150.01.T01	MTR_2g068920	25.281	178	118	5	8	175	79	251	8.85e-14	68.6
MsG0780041150.01.T01	MTR_8g023930	34.906	106	57	3	3	107	79	173	1.13e-13	68.9
MsG0780041150.01.T01	MTR_3g098810	35.238	105	62	3	8	107	69	172	1.44e-13	67.4
MsG0780041150.01.T01	MTR_5g090970	33.333	108	64	3	5	105	71	177	5.74e-13	66.2
MsG0780041150.01.T01	MTR_5g090970	33.333	108	64	3	5	105	72	178	5.89e-13	66.2
MsG0780041150.01.T01	MTR_8g023840	37.374	99	48	4	6	102	69	155	5.90e-13	66.6
MsG0780041150.01.T01	MTR_3g098810	37.647	85	50	1	8	89	69	153	9.59e-13	63.9
MsG0780041150.01.T01	MTR_4g094302	31.193	109	65	3	1	107	61	161	2.03e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780041150.01.T01	AT3G44350	46.970	198	76	5	3	190	62	240	1.37e-53	171
MsG0780041150.01.T01	AT5G22380	45.745	188	86	3	3	190	63	234	6.09e-52	167
MsG0780041150.01.T01	AT3G44350	60.194	103	37	2	3	105	62	160	3.76e-40	134
MsG0780041150.01.T01	AT2G17040	43.750	112	51	3	6	115	61	162	8.89e-27	103
MsG0780041150.01.T01	AT2G02450	46.535	101	47	2	5	105	105	198	9.92e-25	99.8
MsG0780041150.01.T01	AT2G02450	46.535	101	47	2	5	105	105	198	1.27e-24	99.8
MsG0780041150.01.T01	AT4G27410	33.333	150	86	3	5	154	68	203	1.98e-24	97.4
MsG0780041150.01.T01	AT4G27410	33.333	150	86	3	5	154	85	220	4.60e-24	97.1
MsG0780041150.01.T01	AT5G08790	30.412	194	118	4	5	183	61	252	1.72e-23	94.7
MsG0780041150.01.T01	AT4G17980	42.991	107	56	3	2	107	60	162	2.51e-23	94.0
MsG0780041150.01.T01	AT4G17980	42.991	107	56	3	2	107	60	162	3.57e-23	94.4
MsG0780041150.01.T01	AT3G15500	42.574	101	52	2	5	105	68	162	5.43e-23	94.0
MsG0780041150.01.T01	AT1G65910	39.394	132	73	4	6	137	63	187	1.17e-22	95.1
MsG0780041150.01.T01	AT1G69490	34.659	176	105	5	6	175	64	235	1.46e-22	92.0
MsG0780041150.01.T01	AT3G15510	40.517	116	62	2	5	113	71	186	2.24e-22	93.2
MsG0780041150.01.T01	AT1G26870	31.818	198	113	7	1	180	66	259	3.30e-22	93.2
MsG0780041150.01.T01	AT5G63790	34.395	157	86	4	5	157	104	247	5.41e-22	91.3
MsG0780041150.01.T01	AT1G52890	40.594	101	54	2	5	105	68	162	6.81e-22	91.3
MsG0780041150.01.T01	AT5G63790	34.395	157	86	4	5	157	114	257	7.80e-22	90.9
MsG0780041150.01.T01	AT5G17260	37.705	183	96	10	5	187	62	226	8.69e-22	92.4
MsG0780041150.01.T01	AT1G01720	38.136	118	67	3	5	122	61	172	1.59e-21	89.7
MsG0780041150.01.T01	AT5G24590	43.000	100	52	1	6	105	70	164	2.32e-21	90.9
MsG0780041150.01.T01	AT3G17730	44.762	105	51	4	2	106	60	157	5.92e-21	87.4
MsG0780041150.01.T01	AT1G61110	36.842	114	63	2	5	110	70	182	8.20e-21	88.2
MsG0780041150.01.T01	AT3G49530	31.053	190	123	3	6	194	70	252	9.71e-21	89.0
MsG0780041150.01.T01	AT1G33060	42.857	105	50	3	3	105	78	174	1.11e-20	89.4
MsG0780041150.01.T01	AT1G33060	42.857	105	50	3	3	105	78	174	1.21e-20	89.4
MsG0780041150.01.T01	AT5G61430	40.196	102	57	2	5	106	7	104	1.36e-20	87.0
MsG0780041150.01.T01	AT3G49530	31.053	190	123	3	6	194	70	252	1.59e-20	88.6
MsG0780041150.01.T01	AT1G77450	40.000	105	59	3	5	109	64	164	2.15e-20	85.9
MsG0780041150.01.T01	AT5G61430	40.196	102	57	2	5	106	70	167	2.46e-20	87.0
MsG0780041150.01.T01	AT1G34180	43.564	101	51	2	6	106	73	167	2.79e-20	87.8
MsG0780041150.01.T01	AT4G35580	41.748	103	54	2	3	105	63	159	2.96e-20	88.2
MsG0780041150.01.T01	AT1G34180	43.564	101	51	2	6	106	85	179	3.00e-20	87.8
MsG0780041150.01.T01	AT4G35580	41.748	103	54	2	3	105	63	159	3.14e-20	88.2
MsG0780041150.01.T01	AT4G35580	41.748	103	54	2	3	105	63	159	3.19e-20	87.8
MsG0780041150.01.T01	AT3G03200	45.545	101	50	3	5	105	62	157	4.06e-20	87.4
MsG0780041150.01.T01	AT1G34180	43.564	101	51	2	6	106	73	167	4.54e-20	87.8
MsG0780041150.01.T01	AT1G34180	43.564	101	51	2	6	106	85	179	4.54e-20	87.8
MsG0780041150.01.T01	AT3G04060	39.216	102	59	1	5	106	74	172	6.44e-20	85.9
MsG0780041150.01.T01	AT5G07680	39.216	102	58	2	5	106	71	168	9.74e-20	85.5
MsG0780041150.01.T01	AT5G07680	39.216	102	58	2	5	106	57	154	1.02e-19	85.1
MsG0780041150.01.T01	AT4G36160	41.000	100	51	2	6	105	72	163	1.97e-19	85.1
MsG0780041150.01.T01	AT4G36160	41.000	100	51	2	6	105	68	159	2.03e-19	85.1
MsG0780041150.01.T01	AT4G36160	41.000	100	51	2	6	105	68	159	2.03e-19	85.1
MsG0780041150.01.T01	AT2G24430	38.532	109	60	3	5	112	70	172	2.09e-19	84.3
MsG0780041150.01.T01	AT2G24430	38.532	109	60	3	5	112	70	172	2.09e-19	84.3
MsG0780041150.01.T01	AT2G18060	41.000	100	51	2	6	105	67	158	2.46e-19	84.7
MsG0780041150.01.T01	AT2G18060	41.000	100	51	2	6	105	67	158	2.46e-19	84.7
MsG0780041150.01.T01	AT3G10480	40.952	105	56	4	2	106	81	179	2.77e-19	85.1
MsG0780041150.01.T01	AT3G10490	36.538	104	61	2	5	108	83	181	2.96e-19	82.8
MsG0780041150.01.T01	AT5G46590	42.453	106	56	3	2	107	60	160	3.37e-19	83.6
MsG0780041150.01.T01	AT3G10480	39.216	102	57	3	5	106	116	212	3.49e-19	85.1
MsG0780041150.01.T01	AT5G62380	39.000	100	53	3	6	105	65	156	3.95e-19	84.0
MsG0780041150.01.T01	AT5G62380	39.000	100	53	3	6	105	65	156	3.95e-19	84.0
MsG0780041150.01.T01	AT3G10480	41.509	106	53	4	2	106	81	178	5.36e-19	84.3
MsG0780041150.01.T01	AT5G18270	38.235	102	60	1	5	106	75	173	5.53e-19	83.6
MsG0780041150.01.T01	AT5G18270	38.235	102	60	1	5	106	75	173	5.93e-19	83.2
MsG0780041150.01.T01	AT5G39820	34.426	122	63	3	5	109	74	195	9.04e-19	82.8
MsG0780041150.01.T01	AT1G79580	38.318	107	58	3	6	112	75	173	9.98e-19	83.2
MsG0780041150.01.T01	AT1G79580	38.318	107	58	3	6	112	75	173	9.98e-19	83.2
MsG0780041150.01.T01	AT1G79580	38.318	107	58	3	6	112	75	173	9.98e-19	83.2
MsG0780041150.01.T01	AT1G79580	38.318	107	58	3	6	112	75	173	9.98e-19	83.2
MsG0780041150.01.T01	AT1G79580	38.318	107	58	3	6	112	75	173	9.98e-19	83.2
MsG0780041150.01.T01	AT3G18400	37.736	106	59	2	5	110	59	157	1.12e-18	82.4
MsG0780041150.01.T01	AT3G10490	39.048	105	58	3	2	106	81	179	1.53e-18	83.2
MsG0780041150.01.T01	AT3G15170	39.623	106	60	2	5	109	74	176	2.08e-18	81.6
MsG0780041150.01.T01	AT1G34190	41.584	101	53	3	6	106	73	167	2.43e-18	82.8
MsG0780041150.01.T01	AT1G12260	39.394	99	52	3	7	105	66	156	3.77e-18	81.3
MsG0780041150.01.T01	AT5G39610	37.624	101	59	2	5	105	74	170	4.04e-18	80.5
MsG0780041150.01.T01	AT1G71930	38.000	100	54	2	6	105	67	158	4.38e-18	80.9
MsG0780041150.01.T01	AT1G71930	38.000	100	54	2	6	105	67	158	4.38e-18	80.9
MsG0780041150.01.T01	AT1G12260	39.394	99	52	3	7	105	66	156	4.81e-18	81.3
MsG0780041150.01.T01	AT3G04070	38.938	113	57	4	5	108	64	173	5.18e-18	80.9
MsG0780041150.01.T01	AT1G62700	41.000	100	51	4	6	105	65	156	6.89e-18	80.9
MsG0780041150.01.T01	AT1G62700	41.000	100	51	4	6	105	65	156	6.89e-18	80.9
MsG0780041150.01.T01	AT5G66300	27.232	224	121	7	6	195	70	285	6.95e-18	79.7
MsG0780041150.01.T01	AT1G56010	37.255	102	61	2	5	106	7	105	7.40e-18	79.3
MsG0780041150.01.T01	AT1G32770	31.792	173	93	6	7	161	75	240	8.37e-18	80.5
MsG0780041150.01.T01	AT1G32510	39.286	112	57	3	2	107	60	166	9.66e-18	79.3
MsG0780041150.01.T01	AT1G56010	38.000	100	59	2	7	106	76	172	1.16e-17	79.7
MsG0780041150.01.T01	AT5G22290	47.500	80	39	2	6	83	77	155	1.35e-17	79.7
MsG0780041150.01.T01	AT2G43000	36.207	116	69	2	5	120	72	182	1.71e-17	78.6
MsG0780041150.01.T01	AT3G12977	37.255	102	59	2	5	106	19	115	2.14e-17	77.4
MsG0780041150.01.T01	AT1G76420	40.196	102	54	3	6	106	77	172	2.88e-17	78.6
MsG0780041150.01.T01	AT3G12977	37.255	102	59	2	5	106	72	168	3.94e-17	77.8
MsG0780041150.01.T01	AT5G53950	37.864	103	60	2	5	106	71	170	5.33e-17	78.2
MsG0780041150.01.T01	AT3G61910	32.800	125	75	2	7	123	70	193	6.99e-17	77.8
MsG0780041150.01.T01	AT5G13180	39.604	101	54	3	8	107	68	162	9.24e-17	76.3
MsG0780041150.01.T01	AT3G44290	44.872	78	42	1	1	78	65	141	1.13e-16	75.5
MsG0780041150.01.T01	AT3G04070	36.719	128	55	5	5	108	64	189	1.22e-16	77.0
MsG0780041150.01.T01	AT5G46590	39.785	93	55	1	2	94	60	151	1.26e-16	76.3
MsG0780041150.01.T01	AT2G46770	34.783	115	66	3	7	113	75	188	1.63e-16	77.0
MsG0780041150.01.T01	AT2G27300	44.000	75	41	1	1	75	65	138	1.64e-16	76.6
MsG0780041150.01.T01	AT3G12910	36.364	121	67	4	2	112	72	192	2.42e-16	75.9
MsG0780041150.01.T01	AT3G10500	35.514	107	58	4	2	106	63	160	2.77e-16	76.6
MsG0780041150.01.T01	AT3G44290	33.333	117	65	2	1	117	65	168	2.81e-16	75.9
MsG0780041150.01.T01	AT3G29035	36.364	99	59	2	5	103	78	172	4.09e-16	75.5
MsG0780041150.01.T01	AT4G28530	36.792	106	57	3	3	107	78	174	4.99e-16	75.5
MsG0780041150.01.T01	AT1G32870	41.584	101	53	3	6	106	67	161	5.07e-16	75.9
MsG0780041150.01.T01	AT4G10350	35.185	108	64	2	6	113	20	121	5.38e-16	74.7
MsG0780041150.01.T01	AT1G32870	41.584	101	53	3	6	106	67	161	5.55e-16	75.9
MsG0780041150.01.T01	AT1G32870	41.584	101	53	3	6	106	103	197	6.25e-16	75.5
MsG0780041150.01.T01	AT1G33280	34.906	106	60	2	6	111	66	162	6.40e-16	74.7
MsG0780041150.01.T01	AT4G10350	35.185	108	64	2	6	113	67	168	7.41e-16	74.7
MsG0780041150.01.T01	AT3G10490	41.463	82	43	2	25	106	3	79	9.13e-16	74.7
MsG0780041150.01.T01	AT3G10490	41.463	82	43	2	25	106	3	79	9.13e-16	74.7
MsG0780041150.01.T01	AT1G52880	39.815	108	59	2	5	106	71	178	1.21e-15	73.9
MsG0780041150.01.T01	AT5G04410	36.190	105	60	3	2	106	63	160	1.88e-15	74.3
MsG0780041150.01.T01	AT1G54330	38.614	101	53	2	6	106	63	154	2.48e-15	73.2
MsG0780041150.01.T01	AT5G64060	34.653	101	60	3	6	106	63	157	2.60e-15	73.6
MsG0780041150.01.T01	AT2G43000	38.384	99	56	2	22	120	11	104	3.82e-15	70.9
MsG0780041150.01.T01	AT2G18060	45.455	77	34	3	29	105	2	70	4.48e-15	72.0
MsG0780041150.01.T01	AT2G33480	34.314	102	59	2	6	107	67	160	5.12e-15	71.6
MsG0780041150.01.T01	AT2G33480	34.615	104	58	3	6	107	10	105	1.03e-14	70.1
MsG0780041150.01.T01	AT2G33480	34.615	104	58	3	6	107	67	162	1.81e-14	70.1
MsG0780041150.01.T01	AT5G09330	28.313	166	95	6	6	171	63	204	4.20e-14	70.5
MsG0780041150.01.T01	AT5G09330	28.313	166	95	6	6	171	63	204	4.20e-14	70.5
MsG0780041150.01.T01	AT5G09330	28.313	166	95	6	6	171	63	204	4.20e-14	70.5
MsG0780041150.01.T01	AT5G09330	28.313	166	95	6	6	171	63	204	4.20e-14	70.5
MsG0780041150.01.T01	AT5G09330	28.313	166	95	6	6	171	63	204	4.20e-14	70.5
MsG0780041150.01.T01	AT5G04395	43.373	83	44	3	2	82	93	174	1.66e-13	66.2
MsG0780041150.01.T01	AT4G01550	34.579	107	58	3	3	107	59	155	6.43e-13	67.0
MsG0780041150.01.T01	AT5G22290	53.571	56	23	2	30	83	2	56	4.05e-12	63.5
MsG0780041150.01.T01	AT4G01540	28.070	114	69	3	6	116	63	166	7.56e-12	63.5
MsG0780041150.01.T01	AT4G01540	28.070	114	69	3	6	116	63	166	1.20e-11	63.2
MsG0780041150.01.T01	AT4G01540	28.571	105	63	2	6	108	63	157	1.22e-11	63.2
MsG0780041150.01.T01	AT3G04420	31.683	101	58	2	5	105	61	150	1.31e-11	62.4
MsG0780041150.01.T01	AT4G01540	28.571	105	63	2	6	108	63	157	1.48e-11	62.8
MsG0780041150.01.T01	AT3G04420	31.683	101	58	2	5	105	61	150	1.72e-11	62.4
MsG0780041150.01.T01	AT4G01520	27.193	114	70	3	6	116	63	166	2.51e-11	61.6

Find 47 sgRNAs with CRISPR-Local

Find 77 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTCGCAAGTTGAATCTTTC+TGG	0.167753	7:-87171097	None:intergenic
GAGCAAGTGGATTGGTTCTT+AGG	0.188696	7:+87171260	MsG0780041150.01.T01:CDS
CTCACTTCACTTTCTTGCCT+TGG	0.279048	7:-87170273	None:intergenic
AAGAGGATGTTTCATCTAAC+TGG	0.287039	7:-87170473	None:intergenic
TCTTCAGATAATCGCATCAT+TGG	0.352302	7:+87170366	MsG0780041150.01.T01:CDS
TTGGAAAATGAACGAGTATA+AGG	0.364384	7:+87170446	MsG0780041150.01.T01:CDS
TCTGAAGAATAAACATGATT+AGG	0.369085	7:-87170351	None:intergenic
TTATGATGCTTTGTTGGATT+GGG	0.384703	7:+87171238	MsG0780041150.01.T01:CDS
ATTATGATGCTTTGTTGGAT+TGG	0.386486	7:+87171237	MsG0780041150.01.T01:CDS
TGCTGATTATGATGCTTTGT+TGG	0.395773	7:+87171232	MsG0780041150.01.T01:CDS
CATTGGAGTGAAAAGAACTA+TGG	0.407082	7:+87170383	MsG0780041150.01.T01:CDS
CCAGTGTTGGTGAGACGCTT+TGG	0.428965	7:-87170306	None:intergenic
ACATAGGTTGTAACCTTCCT+TGG	0.443955	7:-87171056	None:intergenic
CATAATCAGCAATATCCATT+TGG	0.446503	7:-87171220	None:intergenic
AGCAAGTGGATTGGTTCTTA+GGG	0.460177	7:+87171261	MsG0780041150.01.T01:CDS
TCTATAGAGGAGGAGCTCTC+TGG	0.463442	7:-87171161	None:intergenic
CAAATGGAAAGAAAACTGAT+TGG	0.496748	7:+87170427	MsG0780041150.01.T01:CDS
CCAAAGCGTCTCACCAACAC+TGG	0.504150	7:+87170306	MsG0780041150.01.T01:CDS
AGCTTCTCCAACCTCTTGTG+AGG	0.507371	7:-87171195	None:intergenic
GTCTCACCAACACTGGGTAC+TGG	0.511931	7:+87170313	MsG0780041150.01.T01:CDS
TTCAAACAAAGTAGCTCCTA+AGG	0.519978	7:+87170494	MsG0780041150.01.T01:CDS
GGCTTTCCAGTACCCAGTGT+TGG	0.521942	7:-87170319	None:intergenic
GTTGTAACCTTCCTTGGTGG+TGG	0.522110	7:-87171050	None:intergenic
AGGAGCTACTTTGTTTGAAG+AGG	0.523871	7:-87170490	None:intergenic
GGTTGGAGAAGCTAGCCAAA+TGG	0.532147	7:+87171205	MsG0780041150.01.T01:CDS
TATAGTGGAAGAGCTCCAAA+TGG	0.542069	7:+87170411	MsG0780041150.01.T01:CDS
GCTTCTCCAACCTCTTGTGA+GGG	0.545254	7:-87171194	None:intergenic
TGGATTGGGAGCAAGTGGAT+TGG	0.559258	7:+87171252	MsG0780041150.01.T01:CDS
TAGGTTGTAACCTTCCTTGG+TGG	0.569765	7:-87171053	None:intergenic
AGTGGATTGGTTCTTAGGGT+CGG	0.569927	7:+87171265	MsG0780041150.01.T01:CDS
GTTCAACCCTCACAAGAGGT+TGG	0.570806	7:+87171188	MsG0780041150.01.T01:CDS
ACTGGGTACTGGAAAGCCAC+TGG	0.577981	7:+87170324	MsG0780041150.01.T01:CDS
CCTCTTGTGAGGGTTGAACA+TGG	0.579803	7:-87171184	None:intergenic
GGGTTGAACATGGTCTATAG+AGG	0.609816	7:-87171174	None:intergenic
TAGACGACCACCACCAAGGA+AGG	0.610436	7:+87171043	MsG0780041150.01.T01:CDS
CCATGTTCAACCCTCACAAG+AGG	0.611064	7:+87171184	MsG0780041150.01.T01:CDS
CAAGAAAGTGAAGTGAGAGG+AGG	0.612857	7:+87170279	MsG0780041150.01.T01:CDS
ACATGATGTTCAAATCTCGA+TGG	0.619431	7:+87171118	MsG0780041150.01.T01:CDS
CAAAGCGTCTCACCAACACT+GGG	0.625021	7:+87170307	MsG0780041150.01.T01:CDS
GGATGTTTCATCTAACTGGA+TGG	0.629602	7:-87170469	None:intergenic
TTGAACATGGTCTATAGAGG+AGG	0.640611	7:-87171171	None:intergenic
TTTGTTGGATTGGGAGCAAG+TGG	0.640642	7:+87171247	MsG0780041150.01.T01:CDS
AACATGATTAGGAGATCCAG+TGG	0.656277	7:-87170340	None:intergenic
GTATGAGAGACACGGAACAA+TGG	0.656880	7:+87170238	None:intergenic
AGAGGCAAGTATGAGAGACA+CGG	0.662506	7:+87170230	None:intergenic
AGGCAAGAAAGTGAAGTGAG+AGG	0.663868	7:+87170276	MsG0780041150.01.T01:CDS
TTGATAGACGACCACCACCA+AGG	0.683488	7:+87171039	MsG0780041150.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAGAATATAAAATTTTTAC+AGG	+	Chr7:87170870-87170889	MsG0780041150.01.T01:intron	10.0%
!!!	ATTTAAGTTAATTTGTTTTA+CGG	+	Chr7:87170712-87170731	MsG0780041150.01.T01:intron	10.0%
!!!	TTTGATATTGATTATTTAAT+TGG	+	Chr7:87170952-87170971	MsG0780041150.01.T01:intron	10.0%
!!!	TATCTTTATTCTTTTATTTG+AGG	+	Chr7:87170782-87170801	MsG0780041150.01.T01:intron	15.0%
!!!	TTTAAGTTAATTTGTTTTAC+GGG	+	Chr7:87170713-87170732	MsG0780041150.01.T01:intron	15.0%
!!	AATTCAAACCAATATAAATC+AGG	-	Chr7:87170594-87170613	None:intergenic	20.0%
!!!	ATTAACCTTTTGATTAATAC+TGG	+	Chr7:87170916-87170935	MsG0780041150.01.T01:intron	20.0%
!!!	CTAACAGACTTTATTTTTTT+AGG	-	Chr7:87170551-87170570	None:intergenic	20.0%
!!!	TTAAGTTAATTTGTTTTACG+GGG	+	Chr7:87170714-87170733	MsG0780041150.01.T01:intron	20.0%
!	ATTAGCCAGTATTAATCAAA+AGG	-	Chr7:87170924-87170943	None:intergenic	25.0%
!	GTATACAACCTGATTTATAT+TGG	+	Chr7:87170583-87170602	MsG0780041150.01.T01:intron	25.0%
!	TATTTAATTGGTTGCAGTTA+AGG	+	Chr7:87170964-87170983	MsG0780041150.01.T01:intron	25.0%
!	TCTGAAGAATAAACATGATT+AGG	-	Chr7:87170354-87170373	None:intergenic	25.0%
!!	ACAAAAAATCAAAGTGCTTA+AGG	+	Chr7:87171012-87171031	MsG0780041150.01.T01:CDS	25.0%
!!	CAAAAAATCAAAGTGCTTAA+GGG	+	Chr7:87171013-87171032	MsG0780041150.01.T01:CDS	25.0%
!!	TATTTGAGGTTCATATTAGA+TGG	+	Chr7:87170796-87170815	MsG0780041150.01.T01:intron	25.0%
!!!	ACTTTGATTTTTTGTACACT+CGG	-	Chr7:87171007-87171026	None:intergenic	25.0%
	ACCAATATGTACGAAATTCA+AGG	-	Chr7:87170633-87170652	None:intergenic	30.0%
	ACCTTGAATTTCGTACATAT+TGG	+	Chr7:87170629-87170648	MsG0780041150.01.T01:intron	30.0%
	ATATGATATGTACGTACCTT+AGG	-	Chr7:87170513-87170532	None:intergenic	30.0%
	CAAATGGAAAGAAAACTGAT+TGG	+	Chr7:87170427-87170446	MsG0780041150.01.T01:CDS	30.0%
	CATAATCAGCAATATCCATT+TGG	-	Chr7:87171223-87171242	None:intergenic	30.0%
	TATCATATGCATCTTGAACT+AGG	+	Chr7:87170525-87170544	MsG0780041150.01.T01:intron	30.0%
	TATGATCCACGATATAAAAC+TGG	-	Chr7:87170825-87170844	None:intergenic	30.0%
	TTGGAAAATGAACGAGTATA+AGG	+	Chr7:87170446-87170465	MsG0780041150.01.T01:CDS	30.0%
!	AGAACTATGGTTTTCTATAG+TGG	+	Chr7:87170396-87170415	MsG0780041150.01.T01:CDS	30.0%
!	ATTATGATGCTTTGTTGGAT+TGG	+	Chr7:87171237-87171256	MsG0780041150.01.T01:CDS	30.0%
!	CAATCAGTTTTCTTTCCATT+TGG	-	Chr7:87170429-87170448	None:intergenic	30.0%
!	GTGATTTTCATGGGAAAAAA+TGG	+	Chr7:87170752-87170771	MsG0780041150.01.T01:intron	30.0%
!	TAATAAGGCGTGATTTTCAT+GGG	+	Chr7:87170743-87170762	MsG0780041150.01.T01:intron	30.0%
!	TTATGATGCTTTGTTGGATT+GGG	+	Chr7:87171238-87171257	MsG0780041150.01.T01:CDS	30.0%
!!	AATGGTTCTTTTTCATTCCA+AGG	+	Chr7:87170256-87170275	MsG0780041150.01.T01:CDS	30.0%
	AAGAGGATGTTTCATCTAAC+TGG	-	Chr7:87170476-87170495	None:intergenic	35.0%
	ACATGATGTTCAAATCTCGA+TGG	+	Chr7:87171118-87171137	MsG0780041150.01.T01:CDS	35.0%
	CATTGGAGTGAAAAGAACTA+TGG	+	Chr7:87170383-87170402	MsG0780041150.01.T01:CDS	35.0%
	TCTTCAGATAATCGCATCAT+TGG	+	Chr7:87170366-87170385	MsG0780041150.01.T01:CDS	35.0%
	TTCAAACAAAGTAGCTCCTA+AGG	+	Chr7:87170494-87170513	MsG0780041150.01.T01:CDS	35.0%
	TTTACGGGGTCAATCTAATA+AGG	+	Chr7:87170728-87170747	MsG0780041150.01.T01:intron	35.0%
	TTTCATGGGAAAAAATGGCA+GGG	+	Chr7:87170757-87170776	MsG0780041150.01.T01:intron	35.0%
!	CTAATAAGGCGTGATTTTCA+TGG	+	Chr7:87170742-87170761	MsG0780041150.01.T01:intron	35.0%
!	CTCTTGAGCATTTTGAACAT+AGG	-	Chr7:87171075-87171094	None:intergenic	35.0%
!	TGCTGATTATGATGCTTTGT+TGG	+	Chr7:87171232-87171251	MsG0780041150.01.T01:CDS	35.0%
!	TTTTCATGGGAAAAAATGGC+AGG	+	Chr7:87170756-87170775	MsG0780041150.01.T01:intron	35.0%
!!	TGGAAACCAGTTTTATATCG+TGG	+	Chr7:87170816-87170835	MsG0780041150.01.T01:intron	35.0%
	AACATGATTAGGAGATCCAG+TGG	-	Chr7:87170343-87170362	None:intergenic	40.0%
	ACATAGGTTGTAACCTTCCT+TGG	-	Chr7:87171059-87171078	None:intergenic	40.0%
	GGATGTTTCATCTAACTGGA+TGG	-	Chr7:87170472-87170491	None:intergenic	40.0%
	TTGAACATGGTCTATAGAGG+AGG	-	Chr7:87171174-87171193	None:intergenic	40.0%
!	AGGAGCTACTTTGTTTGAAG+AGG	-	Chr7:87170493-87170512	None:intergenic	40.0%
!	GTTCGCAAGTTGAATCTTTC+TGG	-	Chr7:87171100-87171119	None:intergenic	40.0%
!	TATAGTGGAAGAGCTCCAAA+TGG	+	Chr7:87170411-87170430	MsG0780041150.01.T01:CDS	40.0%
!!	AGCAAGTGGATTGGTTCTTA+GGG	+	Chr7:87171261-87171280	MsG0780041150.01.T01:CDS	40.0%
	AGGCAAGAAAGTGAAGTGAG+AGG	+	Chr7:87170276-87170295	MsG0780041150.01.T01:CDS	45.0%
	CAAGAAAGTGAAGTGAGAGG+AGG	+	Chr7:87170279-87170298	MsG0780041150.01.T01:CDS	45.0%
	CTCACTTCACTTTCTTGCCT+TGG	-	Chr7:87170276-87170295	None:intergenic	45.0%
	GGGTTGAACATGGTCTATAG+AGG	-	Chr7:87171177-87171196	None:intergenic	45.0%
	TAGGTTGTAACCTTCCTTGG+TGG	-	Chr7:87171056-87171075	None:intergenic	45.0%
!	TTTGTTGGATTGGGAGCAAG+TGG	+	Chr7:87171247-87171266	MsG0780041150.01.T01:CDS	45.0%
!!	AGTGGATTGGTTCTTAGGGT+CGG	+	Chr7:87171265-87171284	MsG0780041150.01.T01:CDS	45.0%
!!	GAGCAAGTGGATTGGTTCTT+AGG	+	Chr7:87171260-87171279	MsG0780041150.01.T01:CDS	45.0%
	AGCTTCTCCAACCTCTTGTG+AGG	-	Chr7:87171198-87171217	None:intergenic	50.0%
	CCATGTTCAACCCTCACAAG+AGG	+	Chr7:87171184-87171203	MsG0780041150.01.T01:CDS	50.0%
	CCTCTTGTGAGGGTTGAACA+TGG	-	Chr7:87171187-87171206	None:intergenic	50.0%
	GCTTCTCCAACCTCTTGTGA+GGG	-	Chr7:87171197-87171216	None:intergenic	50.0%
	GGTTGGAGAAGCTAGCCAAA+TGG	+	Chr7:87171205-87171224	MsG0780041150.01.T01:CDS	50.0%
	GTTCAACCCTCACAAGAGGT+TGG	+	Chr7:87171188-87171207	MsG0780041150.01.T01:CDS	50.0%
	GTTGTAACCTTCCTTGGTGG+TGG	-	Chr7:87171053-87171072	None:intergenic	50.0%
	TCTATAGAGGAGGAGCTCTC+TGG	-	Chr7:87171164-87171183	None:intergenic	50.0%
	TTGATAGACGACCACCACCA+AGG	+	Chr7:87171039-87171058	MsG0780041150.01.T01:CDS	50.0%
!	CAAAGCGTCTCACCAACACT+GGG	+	Chr7:87170307-87170326	MsG0780041150.01.T01:CDS	50.0%
!	TGGATTGGGAGCAAGTGGAT+TGG	+	Chr7:87171252-87171271	MsG0780041150.01.T01:CDS	50.0%
	GGCTTTCCAGTACCCAGTGT+TGG	-	Chr7:87170322-87170341	None:intergenic	55.0%
	GTCTCACCAACACTGGGTAC+TGG	+	Chr7:87170313-87170332	MsG0780041150.01.T01:CDS	55.0%
	TAGACGACCACCACCAAGGA+AGG	+	Chr7:87171043-87171062	MsG0780041150.01.T01:CDS	55.0%
!	CCAAAGCGTCTCACCAACAC+TGG	+	Chr7:87170306-87170325	MsG0780041150.01.T01:CDS	55.0%
!!	ACTGGGTACTGGAAAGCCAC+TGG	+	Chr7:87170324-87170343	MsG0780041150.01.T01:CDS	55.0%
!!	CCAGTGTTGGTGAGACGCTT+TGG	-	Chr7:87170309-87170328	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	87170240	87171295	87170240	ID=MsG0780041150.01;Name=MsG0780041150.01
Chr7	mRNA	87170240	87171295	87170240	ID=MsG0780041150.01.T01;Parent=MsG0780041150.01;Name=MsG0780041150.01.T01;_AED=0.30;_eAED=0.31;_QI=0\|0\|0\|1\|1\|1\|2\|0\|196
Chr7	exon	87170240	87170515	87170240	ID=MsG0780041150.01.T01:exon:41295;Parent=MsG0780041150.01.T01
Chr7	exon	87170981	87171295	87170981	ID=MsG0780041150.01.T01:exon:41296;Parent=MsG0780041150.01.T01
Chr7	CDS	87170240	87170515	87170240	ID=MsG0780041150.01.T01:cds;Parent=MsG0780041150.01.T01
Chr7	CDS	87170981	87171295	87170981	ID=MsG0780041150.01.T01:cds;Parent=MsG0780041150.01.T01

Gene Sequence

>MsG0780041150.01.T01

ATGAGAGACACGGAACAATGGTTCTTTTTCATTCCAAGGCAAGAAAGTGAAGTGAGAGGAGGAAGACCAAAGCGTCTCACCAACACTGGGTACTGGAAAGCCACTGGATCTCCTAATCATGTTTATTCTTCAGATAATCGCATCATTGGAGTGAAAAGAACTATGGTTTTCTATAGTGGAAGAGCTCCAAATGGAAAGAAAACTGATTGGAAAATGAACGAGTATAAGGCCATCCAGTTAGATGAAACATCCTCTTCAAACAAAGTAGCTCCTAAGTTAAGGCAAGAATTCAGTTTATGCCGAGTGTACAAAAAATCAAAGTGCTTAAGGGCATTTGATAGACGACCACCACCAAGGAAGGTTACAACCTATGTTCAAAATGCTCAAGAGCACCAGAAAGATTCAACTTGCGAACATGATGTTCAAATCTCGATGGACATAAGTGCAACAAACTCACCAGAGAGCTCCTCCTCTATAGACCATGTTCAACCCTCACAAGAGGTTGGAGAAGCTAGCCAAATGGATATTGCTGATTATGATGCTTTGTTGGATTGGGAGCAAGTGGATTGGTTCTTAGGGTCGGAGCCATAA

Protein sequence

>MsG0780041150.01.T01

MRDTEQWFFFIPRQESEVRGGRPKRLTNTGYWKATGSPNHVYSSDNRIIGVKRTMVFYSGRAPNGKKTDWKMNEYKAIQLDETSSSNKVAPKLRQEFSLCRVYKKSKCLRAFDRRPPPRKVTTYVQNAQEHQKDSTCEHDVQISMDISATNSPESSSSIDHVQPSQEVGEASQMDIADYDALLDWEQVDWFLGSEP*