AlfalfaGEDB | MsG0280006839.01

M. sativa cultivar ZhongmuNo.1 / MsG0280006839.01

KEGG: -
GO: GO:0003677 GO:0006355
PFAM: PF02365

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006839.01.T01	XP_013450122.1	95.96	198	6	2	1	196	60	257	1.30E-137	395

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006839.01.T01	Q9FMR3	45.745	188	86	3	3	190	63	234	4.97E-51	167

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006839.01.T01	A0A072UEA7	95.960	198	6	2	1	196	60	257	6.22e-138	395

TFs/TRs:

Gene ID	Type	Classification
MsG0280006839.01.T01	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0280006839.01	MsG0480023383.01	0.800279	1.552809e-48	7.201296e-46
MsG0280006839.01	MsG0780041150.01	0.872811	2.387646e-67	1.012758e-63

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006839.01.T01	MTR_7g105170	95.960	198	6	2	1	196	60	257	1.58e-141	395
MsG0280006839.01.T01	MTR_2g086690	48.241	199	82	7	3	191	62	249	1.70e-54	174
MsG0280006839.01.T01	MTR_4g052620	66.667	117	37	1	3	119	62	176	1.78e-52	169
MsG0280006839.01.T01	MTR_4g075980	43.750	112	51	3	6	115	70	171	1.48e-26	103
MsG0280006839.01.T01	MTR_8g094580	35.802	162	94	6	5	162	7	162	2.80e-24	95.9
MsG0280006839.01.T01	MTR_4g134460	46.078	102	48	2	5	106	108	202	5.05e-24	98.2
MsG0280006839.01.T01	MTR_6g012670	41.284	109	60	2	5	113	74	178	7.73e-24	96.3
MsG0280006839.01.T01	MTR_8g094580	35.404	161	96	5	5	162	61	216	1.21e-23	95.1
MsG0280006839.01.T01	MTR_2g093810	46.296	108	54	3	5	110	68	173	4.13e-23	94.4
MsG0280006839.01.T01	MTR_5g041940	39.815	108	63	2	6	113	58	163	1.22e-22	92.0
MsG0280006839.01.T01	MTR_8g467490	30.319	188	118	7	5	180	68	254	1.82e-22	93.6
MsG0280006839.01.T01	MTR_4g081870	40.909	110	63	2	6	115	64	171	2.46e-22	91.7
MsG0280006839.01.T01	MTR_6g011860	37.838	111	61	2	5	109	69	177	2.48e-22	93.2
MsG0280006839.01.T01	MTR_8g059170	42.157	102	55	3	5	106	68	165	2.77e-22	92.4
MsG0280006839.01.T01	MTR_5g076850	45.192	104	51	3	6	109	63	160	2.94e-22	94.0
MsG0280006839.01.T01	MTR_4g036030	35.185	162	79	6	6	165	65	202	4.84e-22	92.0
MsG0280006839.01.T01	MTR_2g079990	38.655	119	63	4	5	123	70	178	6.02e-22	91.7
MsG0280006839.01.T01	MTR_3g064580	35.714	140	78	4	6	145	63	190	7.85e-22	92.8
MsG0280006839.01.T01	MTR_6g477900	45.714	105	50	4	2	106	60	157	1.15e-21	89.0
MsG0280006839.01.T01	MTR_7g085220	39.286	112	59	2	5	108	62	172	1.68e-21	90.5
MsG0280006839.01.T01	MTR_5g040420	32.258	155	97	4	5	151	68	222	3.35e-21	90.1
MsG0280006839.01.T01	MTR_2157s0010	32.749	171	106	3	1	162	58	228	8.35e-21	87.4
MsG0280006839.01.T01	MTR_4g089135	37.190	121	57	2	5	106	69	189	1.75e-20	87.8
MsG0280006839.01.T01	MTR_3g093050	43.689	103	48	3	6	106	79	173	1.76e-20	89.0
MsG0280006839.01.T01	MTR_3g093050	43.689	103	48	3	6	106	79	173	1.98e-20	88.6
MsG0280006839.01.T01	MTR_2g064090	40.594	101	55	2	6	106	63	158	2.04e-20	87.4
MsG0280006839.01.T01	MTR_5g012080	26.383	235	121	9	6	194	65	293	2.32e-20	87.4
MsG0280006839.01.T01	MTR_3g070030	40.741	108	61	2	6	113	74	178	2.44e-20	87.4
MsG0280006839.01.T01	MTR_7g100990	41.667	108	61	2	5	111	65	171	4.01e-20	86.3
MsG0280006839.01.T01	MTR_1g097300	47.059	102	46	4	6	106	76	170	5.88e-20	87.4
MsG0280006839.01.T01	MTR_3g093040	41.748	103	50	3	6	106	165	259	6.82e-20	85.5
MsG0280006839.01.T01	MTR_1g096430	42.000	100	50	2	6	105	65	156	1.17e-19	85.1
MsG0280006839.01.T01	MTR_2g062730	38.318	107	59	2	6	112	68	167	1.21e-19	85.5
MsG0280006839.01.T01	MTR_3g096920	35.345	116	69	3	5	119	61	171	1.29e-19	84.7
MsG0280006839.01.T01	MTR_1g090720	42.718	103	57	2	5	106	98	199	1.59e-19	85.9
MsG0280006839.01.T01	MTR_3g109340	41.748	103	53	3	5	106	76	172	2.03e-19	84.7
MsG0280006839.01.T01	MTR_8g024480	36.508	126	69	4	7	125	74	195	2.06e-19	85.5
MsG0280006839.01.T01	MTR_3g435150	40.196	102	57	2	5	106	70	167	2.55e-19	84.0
MsG0280006839.01.T01	MTR_8g076110	37.736	106	58	2	6	111	64	161	2.83e-19	84.0
MsG0280006839.01.T01	MTR_3g096140	31.757	148	87	4	6	153	64	197	3.27e-19	83.2
MsG0280006839.01.T01	MTR_2g080010	32.778	180	77	5	5	177	69	211	3.28e-19	84.3
MsG0280006839.01.T01	MTR_3g109340	41.748	103	52	3	5	106	76	171	3.75e-19	84.0
MsG0280006839.01.T01	MTR_4g108760	38.235	102	59	2	5	106	71	168	5.36e-19	83.6
MsG0280006839.01.T01	MTR_3g096140	31.757	148	87	4	6	153	43	176	5.78e-19	83.2
MsG0280006839.01.T01	MTR_1g008740	39.091	110	60	3	4	112	81	184	5.94e-19	83.6
MsG0280006839.01.T01	MTR_1g008740	39.091	110	60	3	4	112	67	170	6.05e-19	83.6
MsG0280006839.01.T01	MTR_7g011120	40.179	112	61	4	1	108	59	168	6.06e-19	82.8
MsG0280006839.01.T01	MTR_3g088110	38.095	105	61	3	5	109	61	161	6.18e-19	82.8
MsG0280006839.01.T01	MTR_3g096140	31.757	148	87	4	6	153	64	197	6.57e-19	83.6
MsG0280006839.01.T01	MTR_5g069030	42.000	100	52	3	6	105	82	175	7.23e-19	84.3
MsG0280006839.01.T01	MTR_2g079990	30.282	142	71	3	5	123	70	206	1.35e-18	82.8
MsG0280006839.01.T01	MTR_2g086880	52.857	70	32	1	6	75	74	142	2.87e-18	82.4
MsG0280006839.01.T01	MTR_5g014300	41.964	112	50	4	2	107	60	162	3.13e-18	81.3
MsG0280006839.01.T01	MTR_5g021710	39.000	100	53	2	6	105	66	157	3.19e-18	81.6
MsG0280006839.01.T01	MTR_7g011130	37.815	119	60	4	1	108	70	185	3.45e-18	81.3
MsG0280006839.01.T01	MTR_2g086880	52.857	70	32	1	6	75	74	142	3.84e-18	82.0
MsG0280006839.01.T01	MTR_4g101680	38.384	99	53	2	7	105	66	156	6.36e-18	80.9
MsG0280006839.01.T01	MTR_6g032770	37.383	107	62	3	1	106	69	171	9.76e-18	80.5
MsG0280006839.01.T01	MTR_3g070040	42.697	89	49	2	20	108	74	160	2.05e-17	79.0
MsG0280006839.01.T01	MTR_2g078700	38.835	103	59	2	5	106	77	176	2.19e-17	79.3
MsG0280006839.01.T01	MTR_8g099750	38.614	101	61	1	3	102	64	164	2.40e-17	77.4
MsG0280006839.01.T01	MTR_7g005280	40.000	105	54	4	3	105	63	160	5.10e-17	77.0
MsG0280006839.01.T01	MTR_1g069805	37.864	103	54	3	6	107	65	158	9.92e-17	76.6
MsG0280006839.01.T01	MTR_7g085260	36.190	105	61	2	5	106	71	172	1.06e-16	77.4
MsG0280006839.01.T01	MTR_3g116070	48.611	72	36	1	6	76	79	150	1.41e-16	77.0
MsG0280006839.01.T01	MTR_3g096920	39.506	81	47	1	5	85	61	139	1.59e-16	76.6
MsG0280006839.01.T01	MTR_4g098630	39.815	108	57	3	2	107	60	161	2.49e-16	75.9
MsG0280006839.01.T01	MTR_4g035590	32.877	146	70	5	6	151	66	183	2.64e-16	76.3
MsG0280006839.01.T01	MTR_6g084430	36.275	102	57	2	5	106	59	152	2.89e-16	75.9
MsG0280006839.01.T01	MTR_7g070140	42.308	78	43	2	1	76	13	90	4.92e-16	71.6
MsG0280006839.01.T01	MTR_2g064470	33.628	113	67	4	5	117	63	167	5.15e-16	74.7
MsG0280006839.01.T01	MTR_8g063550	33.000	100	61	3	6	105	63	156	7.06e-16	75.5
MsG0280006839.01.T01	MTR_8g063550	33.000	100	61	3	6	105	63	156	7.24e-16	74.7
MsG0280006839.01.T01	MTR_8g093580	33.000	100	61	3	6	105	63	156	8.85e-16	75.1
MsG0280006839.01.T01	MTR_8g063550	33.000	100	61	3	6	105	63	156	9.41e-16	75.1
MsG0280006839.01.T01	MTR_1g090723	37.143	105	59	4	2	106	63	160	2.50e-15	73.9
MsG0280006839.01.T01	MTR_1g090723	37.143	105	58	4	2	106	63	159	2.98e-15	73.6
MsG0280006839.01.T01	MTR_1g090723	37.143	105	58	4	2	106	63	159	3.40e-15	73.6
MsG0280006839.01.T01	MTR_8g023860	36.634	101	52	3	3	102	67	156	6.71e-15	72.4
MsG0280006839.01.T01	MTR_8g023900	34.615	104	56	3	3	105	248	340	7.47e-15	72.4
MsG0280006839.01.T01	MTR_8g023900	34.579	107	58	4	3	107	67	163	7.44e-12	63.5
MsG0280006839.01.T01	MTR_0036s0150	33.663	101	60	2	6	106	63	156	1.17e-14	72.0
MsG0280006839.01.T01	MTR_7g097090	36.275	102	55	3	3	103	62	154	1.53e-14	70.5
MsG0280006839.01.T01	MTR_2g068880	33.884	121	67	4	8	116	80	199	2.44e-14	70.1
MsG0280006839.01.T01	MTR_2g068920	25.281	178	118	5	8	175	79	251	7.47e-14	68.6
MsG0280006839.01.T01	MTR_8g023930	34.906	106	57	3	3	107	79	173	1.27e-13	68.9
MsG0280006839.01.T01	MTR_3g098810	35.238	105	62	3	8	107	69	172	1.71e-13	67.0
MsG0280006839.01.T01	MTR_8g023840	37.374	99	48	4	6	102	69	155	6.87e-13	66.6
MsG0280006839.01.T01	MTR_5g090970	33.333	108	64	3	5	105	71	177	7.12e-13	66.2
MsG0280006839.01.T01	MTR_5g090970	33.333	108	64	3	5	105	72	178	7.38e-13	66.2
MsG0280006839.01.T01	MTR_3g098810	37.647	85	50	1	8	89	69	153	1.27e-12	63.5
MsG0280006839.01.T01	MTR_4g094302	31.193	109	65	3	1	107	61	161	1.89e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280006839.01.T01	AT3G44350	46.970	198	76	5	3	190	62	240	1.57e-53	171
MsG0280006839.01.T01	AT5G22380	45.745	188	86	3	3	190	63	234	5.07e-52	167
MsG0280006839.01.T01	AT3G44350	60.194	103	37	2	3	105	62	160	4.05e-40	134
MsG0280006839.01.T01	AT2G17040	43.750	112	51	3	6	115	61	162	1.14e-26	103
MsG0280006839.01.T01	AT2G02450	46.535	101	47	2	5	105	105	198	1.00e-24	99.8
MsG0280006839.01.T01	AT2G02450	46.535	101	47	2	5	105	105	198	1.19e-24	99.8
MsG0280006839.01.T01	AT4G27410	41.176	102	54	2	5	106	68	163	3.09e-24	97.1
MsG0280006839.01.T01	AT4G27410	41.176	102	54	2	5	106	85	180	5.66e-24	96.7
MsG0280006839.01.T01	AT5G08790	36.220	127	73	3	5	128	61	182	2.93e-23	94.4
MsG0280006839.01.T01	AT4G17980	42.991	107	56	3	2	107	60	162	3.20e-23	93.6
MsG0280006839.01.T01	AT4G17980	42.991	107	56	3	2	107	60	162	4.44e-23	94.0
MsG0280006839.01.T01	AT3G15500	42.574	101	52	2	5	105	68	162	4.90e-23	94.4
MsG0280006839.01.T01	AT3G15510	40.517	116	62	2	5	113	71	186	2.07e-22	93.2
MsG0280006839.01.T01	AT1G65910	45.545	101	49	3	6	106	63	157	3.53e-22	93.6
MsG0280006839.01.T01	AT1G52890	40.594	101	54	2	5	105	68	162	6.74e-22	91.3
MsG0280006839.01.T01	AT5G63790	34.395	157	86	4	5	157	104	247	6.86e-22	90.9
MsG0280006839.01.T01	AT5G63790	34.395	157	86	4	5	157	114	257	8.13e-22	90.9
MsG0280006839.01.T01	AT1G26870	31.818	198	113	7	1	180	66	259	1.10e-21	91.7
MsG0280006839.01.T01	AT5G24590	43.000	100	52	1	6	105	70	164	2.66e-21	90.9
MsG0280006839.01.T01	AT1G01720	38.136	118	67	3	5	122	61	172	2.66e-21	89.0
MsG0280006839.01.T01	AT1G69490	32.768	177	107	5	6	175	64	235	2.68e-21	88.6
MsG0280006839.01.T01	AT5G17260	35.326	184	99	9	5	187	62	226	4.91e-21	90.1
MsG0280006839.01.T01	AT3G17730	44.762	105	51	4	2	106	60	157	6.11e-21	87.4
MsG0280006839.01.T01	AT1G61110	36.842	114	63	2	5	110	70	182	8.20e-21	88.2
MsG0280006839.01.T01	AT3G49530	30.412	194	119	4	6	194	70	252	1.33e-20	88.6
MsG0280006839.01.T01	AT5G61430	40.196	102	57	2	5	106	7	104	1.35e-20	87.0
MsG0280006839.01.T01	AT1G33060	42.857	105	50	3	3	105	78	174	1.47e-20	89.0
MsG0280006839.01.T01	AT1G33060	42.857	105	50	3	3	105	78	174	1.54e-20	89.0
MsG0280006839.01.T01	AT3G49530	30.412	194	119	4	6	194	70	252	1.81e-20	88.6
MsG0280006839.01.T01	AT1G77450	40.000	105	59	3	5	109	64	164	2.21e-20	85.9
MsG0280006839.01.T01	AT1G34180	43.564	101	51	2	6	106	73	167	2.63e-20	88.2
MsG0280006839.01.T01	AT5G61430	40.196	102	57	2	5	106	70	167	2.93e-20	87.0
MsG0280006839.01.T01	AT1G34180	43.564	101	51	2	6	106	85	179	3.03e-20	87.8
MsG0280006839.01.T01	AT4G35580	41.748	103	54	2	3	105	63	159	3.65e-20	87.8
MsG0280006839.01.T01	AT4G35580	41.748	103	54	2	3	105	63	159	3.77e-20	87.8
MsG0280006839.01.T01	AT4G35580	41.748	103	54	2	3	105	63	159	3.81e-20	87.8
MsG0280006839.01.T01	AT1G34180	43.564	101	51	2	6	106	73	167	4.13e-20	87.8
MsG0280006839.01.T01	AT1G34180	43.564	101	51	2	6	106	85	179	4.21e-20	87.8
MsG0280006839.01.T01	AT3G03200	45.545	101	50	3	5	105	62	157	5.12e-20	87.4
MsG0280006839.01.T01	AT3G04060	39.216	102	59	1	5	106	74	172	6.71e-20	85.9
MsG0280006839.01.T01	AT4G36160	31.013	158	89	3	6	151	68	217	9.35e-20	85.9
MsG0280006839.01.T01	AT4G36160	31.013	158	89	3	6	151	68	217	9.35e-20	85.9
MsG0280006839.01.T01	AT4G36160	31.013	158	89	3	6	151	72	221	1.06e-19	85.9
MsG0280006839.01.T01	AT5G07680	39.216	102	58	2	5	106	57	154	1.08e-19	85.1
MsG0280006839.01.T01	AT5G07680	39.216	102	58	2	5	106	71	168	1.15e-19	85.1
MsG0280006839.01.T01	AT2G24430	38.532	109	60	3	5	112	70	172	1.97e-19	84.3
MsG0280006839.01.T01	AT2G24430	38.532	109	60	3	5	112	70	172	1.97e-19	84.3
MsG0280006839.01.T01	AT2G18060	41.000	100	51	2	6	105	67	158	2.70e-19	84.7
MsG0280006839.01.T01	AT2G18060	41.000	100	51	2	6	105	67	158	2.70e-19	84.7
MsG0280006839.01.T01	AT3G10480	40.952	105	56	4	2	106	81	179	2.80e-19	85.1
MsG0280006839.01.T01	AT3G10490	36.538	104	61	2	5	108	83	181	3.19e-19	82.4
MsG0280006839.01.T01	AT5G46590	42.453	106	56	3	2	107	60	160	3.81e-19	83.2
MsG0280006839.01.T01	AT5G62380	39.000	100	53	3	6	105	65	156	3.84e-19	84.0
MsG0280006839.01.T01	AT5G62380	39.000	100	53	3	6	105	65	156	3.84e-19	84.0
MsG0280006839.01.T01	AT3G10480	39.216	102	57	3	5	106	116	212	3.88e-19	84.7
MsG0280006839.01.T01	AT3G10480	41.509	106	53	4	2	106	81	178	5.36e-19	84.3
MsG0280006839.01.T01	AT5G18270	38.235	102	60	1	5	106	75	173	5.59e-19	83.6
MsG0280006839.01.T01	AT5G18270	38.235	102	60	1	5	106	75	173	5.81e-19	83.6
MsG0280006839.01.T01	AT3G18400	37.736	106	59	2	5	110	59	157	9.94e-19	82.4
MsG0280006839.01.T01	AT5G39820	32.237	152	83	5	5	137	74	224	1.02e-18	82.8
MsG0280006839.01.T01	AT1G79580	38.318	107	58	3	6	112	75	173	1.16e-18	82.8
MsG0280006839.01.T01	AT1G79580	38.318	107	58	3	6	112	75	173	1.16e-18	82.8
MsG0280006839.01.T01	AT1G79580	38.318	107	58	3	6	112	75	173	1.16e-18	82.8
MsG0280006839.01.T01	AT1G79580	38.318	107	58	3	6	112	75	173	1.16e-18	82.8
MsG0280006839.01.T01	AT1G79580	38.318	107	58	3	6	112	75	173	1.16e-18	82.8
MsG0280006839.01.T01	AT5G66300	27.232	224	121	6	6	195	70	285	1.21e-18	82.0
MsG0280006839.01.T01	AT1G71930	30.488	164	98	4	6	165	67	218	1.27e-18	82.4
MsG0280006839.01.T01	AT1G71930	30.488	164	98	4	6	165	67	218	1.27e-18	82.4
MsG0280006839.01.T01	AT3G15170	40.777	103	57	2	5	106	74	173	1.78e-18	81.6
MsG0280006839.01.T01	AT3G10490	39.048	105	58	3	2	106	81	179	1.93e-18	82.8
MsG0280006839.01.T01	AT1G34190	41.584	101	53	3	6	106	73	167	2.19e-18	82.8
MsG0280006839.01.T01	AT5G39610	33.600	125	75	3	5	129	74	190	2.19e-18	81.3
MsG0280006839.01.T01	AT1G12260	39.394	99	52	3	7	105	66	156	4.84e-18	80.9
MsG0280006839.01.T01	AT1G12260	39.394	99	52	3	7	105	66	156	5.57e-18	81.3
MsG0280006839.01.T01	AT3G04070	38.938	113	57	4	5	108	64	173	6.65e-18	80.5
MsG0280006839.01.T01	AT1G62700	41.000	100	51	4	6	105	65	156	8.14e-18	80.9
MsG0280006839.01.T01	AT1G62700	41.000	100	51	4	6	105	65	156	8.14e-18	80.9
MsG0280006839.01.T01	AT1G56010	37.255	102	61	2	5	106	7	105	9.18e-18	79.0
MsG0280006839.01.T01	AT1G32510	39.286	112	57	3	2	107	60	166	1.10e-17	79.3
MsG0280006839.01.T01	AT1G56010	38.000	100	59	2	7	106	76	172	1.42e-17	79.3
MsG0280006839.01.T01	AT5G22290	47.500	80	39	2	6	83	77	155	1.64e-17	79.3
MsG0280006839.01.T01	AT3G12977	37.255	102	59	2	5	106	19	115	2.09e-17	77.4
MsG0280006839.01.T01	AT1G32770	39.252	107	53	3	7	105	75	177	2.83e-17	79.0
MsG0280006839.01.T01	AT1G76420	40.196	102	54	3	6	106	77	172	3.06e-17	78.6
MsG0280006839.01.T01	AT2G43000	35.345	116	70	2	5	120	72	182	3.95e-17	77.8
MsG0280006839.01.T01	AT5G53950	37.864	103	60	2	5	106	71	170	4.65e-17	78.6
MsG0280006839.01.T01	AT3G12977	37.255	102	59	2	5	106	72	168	4.69e-17	77.4
MsG0280006839.01.T01	AT3G61910	32.800	125	75	2	7	123	70	193	9.15e-17	77.4
MsG0280006839.01.T01	AT5G13180	39.604	101	54	3	8	107	68	162	1.06e-16	76.3
MsG0280006839.01.T01	AT5G46590	39.785	93	55	1	2	94	60	151	1.47e-16	76.3
MsG0280006839.01.T01	AT3G04070	36.719	128	55	5	5	108	64	189	1.47e-16	77.0
MsG0280006839.01.T01	AT3G44290	44.872	78	42	1	1	78	65	141	1.48e-16	75.1
MsG0280006839.01.T01	AT2G46770	34.783	115	66	3	7	113	75	188	2.02e-16	76.6
MsG0280006839.01.T01	AT2G27300	44.000	75	41	1	1	75	65	138	2.04e-16	76.3
MsG0280006839.01.T01	AT3G12910	36.364	121	67	4	2	112	72	192	3.15e-16	75.5
MsG0280006839.01.T01	AT3G10500	35.514	107	58	4	2	106	63	160	3.36e-16	76.3
MsG0280006839.01.T01	AT3G29035	36.364	99	59	2	5	103	78	172	3.67e-16	75.5
MsG0280006839.01.T01	AT3G44290	44.872	78	42	1	1	78	65	141	4.52e-16	75.5
MsG0280006839.01.T01	AT4G10350	35.185	108	64	2	6	113	20	121	4.96e-16	74.7
MsG0280006839.01.T01	AT4G28530	36.792	106	57	3	3	107	78	174	4.99e-16	75.5
MsG0280006839.01.T01	AT1G33280	34.906	106	60	2	6	111	66	162	6.80e-16	74.7
MsG0280006839.01.T01	AT1G32870	41.584	101	53	3	6	106	67	161	6.82e-16	75.5
MsG0280006839.01.T01	AT1G32870	41.584	101	53	3	6	106	67	161	7.05e-16	75.5
MsG0280006839.01.T01	AT1G32870	41.584	101	53	3	6	106	103	197	7.93e-16	75.5
MsG0280006839.01.T01	AT4G10350	35.185	108	64	2	6	113	67	168	8.02e-16	74.7
MsG0280006839.01.T01	AT1G52880	39.815	108	59	2	5	106	71	178	1.06e-15	74.3
MsG0280006839.01.T01	AT3G10490	41.463	82	43	2	25	106	3	79	1.17e-15	74.3
MsG0280006839.01.T01	AT3G10490	41.463	82	43	2	25	106	3	79	1.17e-15	74.3
MsG0280006839.01.T01	AT5G04410	36.190	105	60	3	2	106	63	160	2.09e-15	74.3
MsG0280006839.01.T01	AT5G64060	34.653	101	60	3	6	106	63	157	2.39e-15	73.6
MsG0280006839.01.T01	AT1G54330	38.614	101	53	2	6	106	63	154	2.74e-15	72.8
MsG0280006839.01.T01	AT2G18060	45.455	77	34	3	29	105	2	70	4.53e-15	72.0
MsG0280006839.01.T01	AT2G33480	34.314	102	59	2	6	107	67	160	5.27e-15	71.6
MsG0280006839.01.T01	AT2G43000	37.374	99	57	2	22	120	11	104	8.74e-15	70.1
MsG0280006839.01.T01	AT2G33480	34.615	104	58	3	6	107	10	105	1.12e-14	70.1
MsG0280006839.01.T01	AT2G33480	34.615	104	58	3	6	107	67	162	1.83e-14	70.1
MsG0280006839.01.T01	AT5G09330	34.000	100	60	3	6	105	63	156	7.17e-14	69.7
MsG0280006839.01.T01	AT5G09330	34.000	100	60	3	6	105	63	156	7.17e-14	69.7
MsG0280006839.01.T01	AT5G09330	34.000	100	60	3	6	105	63	156	7.17e-14	69.7
MsG0280006839.01.T01	AT5G09330	34.000	100	60	3	6	105	63	156	7.17e-14	69.7
MsG0280006839.01.T01	AT5G09330	34.000	100	60	3	6	105	63	156	7.17e-14	69.7
MsG0280006839.01.T01	AT5G04395	43.373	83	44	3	2	82	93	174	2.19e-13	65.9
MsG0280006839.01.T01	AT4G01550	34.579	107	58	3	3	107	59	155	5.95e-13	67.0
MsG0280006839.01.T01	AT5G22290	53.571	56	23	2	30	83	2	56	5.20e-12	63.2
MsG0280006839.01.T01	AT4G01540	28.070	114	69	3	6	116	63	166	8.32e-12	63.5
MsG0280006839.01.T01	AT4G01540	28.070	114	69	3	6	116	63	166	1.20e-11	63.2
MsG0280006839.01.T01	AT3G04420	31.683	101	58	2	5	105	61	150	1.21e-11	62.4
MsG0280006839.01.T01	AT4G01540	28.070	114	69	3	6	116	63	166	1.39e-11	62.8
MsG0280006839.01.T01	AT3G04420	31.683	101	58	2	5	105	61	150	1.51e-11	62.8
MsG0280006839.01.T01	AT4G01540	28.571	105	63	2	6	108	63	157	1.64e-11	62.8
MsG0280006839.01.T01	AT4G01520	27.193	114	70	3	6	116	63	166	2.80e-11	61.6

Find 49 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTCGCAAGTTGAATCTTTC+TGG	0.167753	2:-6974382	None:intergenic
GAGCAAGTGGATTGGTTCTT+AGG	0.188696	2:+6974545	MsG0280006839.01.T01:CDS
CTCACTTCACTTTCTTGCCT+TGG	0.279048	2:-6973564	None:intergenic
AAGAGGATGTTTCATCTAAC+TGG	0.287039	2:-6973764	None:intergenic
TCTTCAGATAATCGCATCAT+TGG	0.352302	2:+6973657	MsG0280006839.01.T01:CDS
TTGGAAAATGAACGAGTATA+AGG	0.364384	2:+6973737	MsG0280006839.01.T01:CDS
TCTGAAGAATAAACATGATT+AGG	0.369085	2:-6973642	None:intergenic
TTATGATGCTTTGTTGGATT+GGG	0.384703	2:+6974523	MsG0280006839.01.T01:CDS
ATTATGATGCTTTGTTGGAT+TGG	0.386486	2:+6974522	MsG0280006839.01.T01:CDS
TGCTGATTATGATGCTTTGT+TGG	0.395773	2:+6974517	MsG0280006839.01.T01:CDS
CATTGGAGTGAAAAGAACTA+TGG	0.407082	2:+6973674	MsG0280006839.01.T01:CDS
CCAGTGTTGGTGAGACGCTT+TGG	0.428965	2:-6973597	None:intergenic
CATAATCAGCAATATCCATT+TGG	0.446503	2:-6974505	None:intergenic
AGCAAGTGGATTGGTTCTTA+GGG	0.460177	2:+6974546	MsG0280006839.01.T01:CDS
TCTATAGAGGAAGAGCTCTC+TGG	0.482763	2:-6974446	None:intergenic
CAAATGGAAAGAAAACTGAT+TGG	0.496748	2:+6973718	MsG0280006839.01.T01:CDS
CCAAAGCGTCTCACCAACAC+TGG	0.504150	2:+6973597	MsG0280006839.01.T01:CDS
ACATGGGTTGTAACCCTCCT+TGG	0.505741	2:-6974341	None:intergenic
AGCTTCTCCAACCTCTTGTG+AGG	0.507371	2:-6974480	None:intergenic
GTCTCACCAACACTGGGTAC+TGG	0.511931	2:+6973604	MsG0280006839.01.T01:CDS
TTCAAACAAAGTAGCTCCTA+AGG	0.519978	2:+6973785	MsG0280006839.01.T01:CDS
GGCTTTCCAGTACCCAGTGT+TGG	0.521942	2:-6973610	None:intergenic
AGGAGCTACTTTGTTTGAAG+AGG	0.523871	2:-6973781	None:intergenic
GGTTGGAGAAGCTAGCCAAA+TGG	0.532147	2:+6974490	MsG0280006839.01.T01:CDS
TATAGTGGAAGAGCTCCAAA+TGG	0.542069	2:+6973702	MsG0280006839.01.T01:CDS
GCTTCTCCAACCTCTTGTGA+GGG	0.545254	2:-6974479	None:intergenic
TGGATTGGGAGCAAGTGGAT+TGG	0.559258	2:+6974537	MsG0280006839.01.T01:CDS
GGGTTGAACATGGTCTATAG+AGG	0.566952	2:-6974459	None:intergenic
AGTGGATTGGTTCTTAGGGT+CGG	0.569927	2:+6974550	MsG0280006839.01.T01:CDS
GTTCAACCCTCACAAGAGGT+TGG	0.570806	2:+6974473	MsG0280006839.01.T01:CDS
ACTGGGTACTGGAAAGCCAC+TGG	0.577981	2:+6973615	MsG0280006839.01.T01:CDS
CCTCTTGTGAGGGTTGAACA+TGG	0.579803	2:-6974469	None:intergenic
ACCCATGTTCAAAATGCTCA+AGG	0.588355	2:+6974356	MsG0280006839.01.T01:CDS
TGGGTTGTAACCCTCCTTGG+TGG	0.590628	2:-6974338	None:intergenic
GTTGTAACCCTCCTTGGTGG+TGG	0.601972	2:-6974335	None:intergenic
CCATGTTCAACCCTCACAAG+AGG	0.611064	2:+6974469	MsG0280006839.01.T01:CDS
CAAGAAAGTGAAGTGAGAGG+AGG	0.612857	2:+6973570	MsG0280006839.01.T01:CDS
TAGACGACCACCACCAAGGA+GGG	0.617242	2:+6974328	MsG0280006839.01.T01:CDS
ACATGATGTTCAAATCTCGA+TGG	0.619431	2:+6974403	MsG0280006839.01.T01:CDS
CAAAGCGTCTCACCAACACT+GGG	0.625021	2:+6973598	MsG0280006839.01.T01:CDS
GGATGTTTCATCTAACTGGA+TGG	0.629602	2:-6973760	None:intergenic
TTTGTTGGATTGGGAGCAAG+TGG	0.640642	2:+6974532	MsG0280006839.01.T01:CDS
CCCATGTTCAAAATGCTCAA+GGG	0.648110	2:+6974357	MsG0280006839.01.T01:CDS
AACATGATTAGGAGATCCAG+TGG	0.656277	2:-6973631	None:intergenic
GTATGAGAGACACGGAACAA+TGG	0.656880	2:+6973529	None:intergenic
AGAGGCAAGTATGAGAGACA+CGG	0.662506	2:+6973521	None:intergenic
AGGCAAGAAAGTGAAGTGAG+AGG	0.663868	2:+6973567	MsG0280006839.01.T01:CDS
TTGATAGACGACCACCACCA+AGG	0.683488	2:+6974324	MsG0280006839.01.T01:CDS
ATAGACGACCACCACCAAGG+AGG	0.747279	2:+6974327	MsG0280006839.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTTAGTTAATTTGTTTTA+CGG	+	Chr2:6974002-6974021	MsG0280006839.01.T01:intron	10.0%
!!!	TTTGATATTGATTATTTAAT+TGG	+	Chr2:6974237-6974256	MsG0280006839.01.T01:intron	10.0%
!!!	ATTTAGTTAATTTGTTTTAC+GGG	+	Chr2:6974003-6974022	MsG0280006839.01.T01:intron	15.0%
!!	AATTCAAACCAATATAAATC+AGG	-	Chr2:6973885-6973904	None:intergenic	20.0%
!!!	ATTAACCTTTTGATTAATAC+TGG	+	Chr2:6974201-6974220	MsG0280006839.01.T01:intron	20.0%
!!!	CTAACAGACTTTATTTTTTT+AGG	-	Chr2:6973842-6973861	None:intergenic	20.0%
!!!	CTATCTTTATTCTTTTTTTG+AGG	+	Chr2:6974071-6974090	MsG0280006839.01.T01:intron	20.0%
!!!	TTTAGTTAATTTGTTTTACG+GGG	+	Chr2:6974004-6974023	MsG0280006839.01.T01:intron	20.0%
!!!	TTTGTTTTGTTTTGTTTTAC+AGG	+	Chr2:6974155-6974174	MsG0280006839.01.T01:intron	20.0%
!	ATTAGCCAGTATTAATCAAA+AGG	-	Chr2:6974209-6974228	None:intergenic	25.0%
!	GTATACAACCTGATTTATAT+TGG	+	Chr2:6973874-6973893	MsG0280006839.01.T01:intron	25.0%
!	TATTTAATTGGTTGCAGTTA+AGG	+	Chr2:6974249-6974268	MsG0280006839.01.T01:intron	25.0%
!	TCTGAAGAATAAACATGATT+AGG	-	Chr2:6973645-6973664	None:intergenic	25.0%
!!	ACAAAAAATCAAAGTGCTTA+AGG	+	Chr2:6974297-6974316	MsG0280006839.01.T01:CDS	25.0%
!!	CAAAAAATCAAAGTGCTTAA+GGG	+	Chr2:6974298-6974317	MsG0280006839.01.T01:CDS	25.0%
!!!	ACTTTGATTTTTTGTACACT+CGG	-	Chr2:6974292-6974311	None:intergenic	25.0%
!!!	TTTTTGAGGTTCATATTAGA+TGG	+	Chr2:6974085-6974104	MsG0280006839.01.T01:intron	25.0%
	ACCAATATGTACGAAATTCA+AGG	-	Chr2:6973924-6973943	None:intergenic	30.0%
	ACCTTGAATTTCGTACATAT+TGG	+	Chr2:6973920-6973939	MsG0280006839.01.T01:intron	30.0%
	ATATGATATGTACGTACCTT+AGG	-	Chr2:6973804-6973823	None:intergenic	30.0%
	CAAATGGAAAGAAAACTGAT+TGG	+	Chr2:6973718-6973737	MsG0280006839.01.T01:CDS	30.0%
	CATAATCAGCAATATCCATT+TGG	-	Chr2:6974508-6974527	None:intergenic	30.0%
	TATCATATGCATCTTGAACT+AGG	+	Chr2:6973816-6973835	MsG0280006839.01.T01:intron	30.0%
	TATGATCCACGATATAAAAC+TGG	-	Chr2:6974114-6974133	None:intergenic	30.0%
	TTGGAAAATGAACGAGTATA+AGG	+	Chr2:6973737-6973756	MsG0280006839.01.T01:CDS	30.0%
!	AGAACTATGGTTTTCTATAG+TGG	+	Chr2:6973687-6973706	MsG0280006839.01.T01:CDS	30.0%
!	ATTATGATGCTTTGTTGGAT+TGG	+	Chr2:6974522-6974541	MsG0280006839.01.T01:CDS	30.0%
!	CAATCAGTTTTCTTTCCATT+TGG	-	Chr2:6973720-6973739	None:intergenic	30.0%
!	GTGATTTTCATGGGAAAAAA+TGG	+	Chr2:6974042-6974061	MsG0280006839.01.T01:intron	30.0%
!	TAATAAGGCGTGATTTTCAT+GGG	+	Chr2:6974033-6974052	MsG0280006839.01.T01:intron	30.0%
!	TTATGATGCTTTGTTGGATT+GGG	+	Chr2:6974523-6974542	MsG0280006839.01.T01:CDS	30.0%
!!	AATGGTTCTTTTTCATTCCA+AGG	+	Chr2:6973547-6973566	MsG0280006839.01.T01:CDS	30.0%
	AAGAGGATGTTTCATCTAAC+TGG	-	Chr2:6973767-6973786	None:intergenic	35.0%
	ACATGATGTTCAAATCTCGA+TGG	+	Chr2:6974403-6974422	MsG0280006839.01.T01:CDS	35.0%
	CATTGGAGTGAAAAGAACTA+TGG	+	Chr2:6973674-6973693	MsG0280006839.01.T01:CDS	35.0%
	TCTTCAGATAATCGCATCAT+TGG	+	Chr2:6973657-6973676	MsG0280006839.01.T01:CDS	35.0%
	TTCAAACAAAGTAGCTCCTA+AGG	+	Chr2:6973785-6973804	MsG0280006839.01.T01:CDS	35.0%
	TTTACGGGGTCAATCTAATA+AGG	+	Chr2:6974018-6974037	MsG0280006839.01.T01:intron	35.0%
	TTTCATGGGAAAAAATGGCA+GGG	+	Chr2:6974047-6974066	MsG0280006839.01.T01:intron	35.0%
!	CTAATAAGGCGTGATTTTCA+TGG	+	Chr2:6974032-6974051	MsG0280006839.01.T01:intron	35.0%
!	TGCTGATTATGATGCTTTGT+TGG	+	Chr2:6974517-6974536	MsG0280006839.01.T01:CDS	35.0%
!	TTTTCATGGGAAAAAATGGC+AGG	+	Chr2:6974046-6974065	MsG0280006839.01.T01:intron	35.0%
!!	TGGAAACCAGTTTTATATCG+TGG	+	Chr2:6974105-6974124	MsG0280006839.01.T01:intron	35.0%
	AACATGATTAGGAGATCCAG+TGG	-	Chr2:6973634-6973653	None:intergenic	40.0%
	ACCCATGTTCAAAATGCTCA+AGG	+	Chr2:6974356-6974375	MsG0280006839.01.T01:CDS	40.0%
	CCCATGTTCAAAATGCTCAA+GGG	+	Chr2:6974357-6974376	MsG0280006839.01.T01:CDS	40.0%
	GGATGTTTCATCTAACTGGA+TGG	-	Chr2:6973763-6973782	None:intergenic	40.0%
!	AGGAGCTACTTTGTTTGAAG+AGG	-	Chr2:6973784-6973803	None:intergenic	40.0%
!	CCCTTGAGCATTTTGAACAT+GGG	-	Chr2:6974360-6974379	None:intergenic	40.0%
!	GTTCGCAAGTTGAATCTTTC+TGG	-	Chr2:6974385-6974404	None:intergenic	40.0%
!	TATAGTGGAAGAGCTCCAAA+TGG	+	Chr2:6973702-6973721	MsG0280006839.01.T01:CDS	40.0%
!!	AGCAAGTGGATTGGTTCTTA+GGG	+	Chr2:6974546-6974565	MsG0280006839.01.T01:CDS	40.0%
	AGGCAAGAAAGTGAAGTGAG+AGG	+	Chr2:6973567-6973586	MsG0280006839.01.T01:CDS	45.0%
	CAAGAAAGTGAAGTGAGAGG+AGG	+	Chr2:6973570-6973589	MsG0280006839.01.T01:CDS	45.0%
	CTCACTTCACTTTCTTGCCT+TGG	-	Chr2:6973567-6973586	None:intergenic	45.0%
	GGGTTGAACATGGTCTATAG+AGG	-	Chr2:6974462-6974481	None:intergenic	45.0%
	TCTATAGAGGAAGAGCTCTC+TGG	-	Chr2:6974449-6974468	None:intergenic	45.0%
!	GCCCTTGAGCATTTTGAACA+TGG	-	Chr2:6974361-6974380	None:intergenic	45.0%
!	TTTGTTGGATTGGGAGCAAG+TGG	+	Chr2:6974532-6974551	MsG0280006839.01.T01:CDS	45.0%
!!	AGTGGATTGGTTCTTAGGGT+CGG	+	Chr2:6974550-6974569	MsG0280006839.01.T01:CDS	45.0%
!!	GAGCAAGTGGATTGGTTCTT+AGG	+	Chr2:6974545-6974564	MsG0280006839.01.T01:CDS	45.0%
	AGCTTCTCCAACCTCTTGTG+AGG	-	Chr2:6974483-6974502	None:intergenic	50.0%
	CCATGTTCAACCCTCACAAG+AGG	+	Chr2:6974469-6974488	MsG0280006839.01.T01:CDS	50.0%
	CCTCTTGTGAGGGTTGAACA+TGG	-	Chr2:6974472-6974491	None:intergenic	50.0%
	GCTTCTCCAACCTCTTGTGA+GGG	-	Chr2:6974482-6974501	None:intergenic	50.0%
	GGTTGGAGAAGCTAGCCAAA+TGG	+	Chr2:6974490-6974509	MsG0280006839.01.T01:CDS	50.0%
	GTTCAACCCTCACAAGAGGT+TGG	+	Chr2:6974473-6974492	MsG0280006839.01.T01:CDS	50.0%
	TTGATAGACGACCACCACCA+AGG	+	Chr2:6974324-6974343	MsG0280006839.01.T01:CDS	50.0%
!	ACATGGGTTGTAACCCTCCT+TGG	-	Chr2:6974344-6974363	None:intergenic	50.0%
!	CAAAGCGTCTCACCAACACT+GGG	+	Chr2:6973598-6973617	MsG0280006839.01.T01:CDS	50.0%
!	TGGATTGGGAGCAAGTGGAT+TGG	+	Chr2:6974537-6974556	MsG0280006839.01.T01:CDS	50.0%
	ATAGACGACCACCACCAAGG+AGG	+	Chr2:6974327-6974346	MsG0280006839.01.T01:CDS	55.0%
	GGCTTTCCAGTACCCAGTGT+TGG	-	Chr2:6973613-6973632	None:intergenic	55.0%
	GTCTCACCAACACTGGGTAC+TGG	+	Chr2:6973604-6973623	MsG0280006839.01.T01:CDS	55.0%
	GTTGTAACCCTCCTTGGTGG+TGG	-	Chr2:6974338-6974357	None:intergenic	55.0%
	TAGACGACCACCACCAAGGA+GGG	+	Chr2:6974328-6974347	MsG0280006839.01.T01:CDS	55.0%
	TGGGTTGTAACCCTCCTTGG+TGG	-	Chr2:6974341-6974360	None:intergenic	55.0%
!	CCAAAGCGTCTCACCAACAC+TGG	+	Chr2:6973597-6973616	MsG0280006839.01.T01:CDS	55.0%
!!	ACTGGGTACTGGAAAGCCAC+TGG	+	Chr2:6973615-6973634	MsG0280006839.01.T01:CDS	55.0%
!!	CCAGTGTTGGTGAGACGCTT+TGG	-	Chr2:6973600-6973619	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	6973531	6974580	6973531	ID=MsG0280006839.01;Name=MsG0280006839.01
Chr2	mRNA	6973531	6974580	6973531	ID=MsG0280006839.01.T01;Parent=MsG0280006839.01;Name=MsG0280006839.01.T01;_AED=0.37;_eAED=0.37;_QI=0\|0\|0\|1\|1\|1\|2\|0\|196
Chr2	exon	6973531	6973806	6973531	ID=MsG0280006839.01.T01:exon:7820;Parent=MsG0280006839.01.T01
Chr2	exon	6974266	6974580	6974266	ID=MsG0280006839.01.T01:exon:7821;Parent=MsG0280006839.01.T01
Chr2	CDS	6973531	6973806	6973531	ID=MsG0280006839.01.T01:cds;Parent=MsG0280006839.01.T01
Chr2	CDS	6974266	6974580	6974266	ID=MsG0280006839.01.T01:cds;Parent=MsG0280006839.01.T01

Gene Sequence

>MsG0280006839.01.T01

ATGAGAGACACGGAACAATGGTTCTTTTTCATTCCAAGGCAAGAAAGTGAAGTGAGAGGAGGAAGACCAAAGCGTCTCACCAACACTGGGTACTGGAAAGCCACTGGATCTCCTAATCATGTTTATTCTTCAGATAATCGCATCATTGGAGTGAAAAGAACTATGGTTTTCTATAGTGGAAGAGCTCCAAATGGAAAGAAAACTGATTGGAAAATGAACGAGTATAAGGCCATCCAGTTAGATGAAACATCCTCTTCAAACAAAGTAGCTCCTAAGTTAAGGCAAGAATTCAGTTTATGCCGAGTGTACAAAAAATCAAAGTGCTTAAGGGCATTTGATAGACGACCACCACCAAGGAGGGTTACAACCCATGTTCAAAATGCTCAAGGGCACCAGAAAGATTCAACTTGCGAACATGATGTTCAAATCTCGATGGACATAAGTGCAACAAACTCACCAGAGAGCTCTTCCTCTATAGACCATGTTCAACCCTCACAAGAGGTTGGAGAAGCTAGCCAAATGGATATTGCTGATTATGATGCTTTGTTGGATTGGGAGCAAGTGGATTGGTTCTTAGGGTCGGAGCCATAA

Protein sequence

>MsG0280006839.01.T01

MRDTEQWFFFIPRQESEVRGGRPKRLTNTGYWKATGSPNHVYSSDNRIIGVKRTMVFYSGRAPNGKKTDWKMNEYKAIQLDETSSSNKVAPKLRQEFSLCRVYKKSKCLRAFDRRPPPRRVTTHVQNAQGHQKDSTCEHDVQISMDISATNSPESSSSIDHVQPSQEVGEASQMDIADYDALLDWEQVDWFLGSEP*