AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041509.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041509.01.T01 MTR_7g113050 96.226 318 12 0 1 318 1 318 0.0 643
MsG0780041509.01.T01 MTR_7g113050 61.321 106 38 2 276 378 193 298 4.67e-32 123
MsG0780041509.01.T01 MTR_7g113030 94.340 318 18 0 1 318 1 318 0.0 632
MsG0780041509.01.T01 MTR_7g113030 60.952 105 38 2 277 378 194 298 2.08e-31 121
MsG0780041509.01.T01 MTR_7g112615 92.767 318 23 0 1 318 1 318 0.0 620
MsG0780041509.01.T01 MTR_7g112615 59.048 105 40 2 277 378 194 298 5.41e-29 115
MsG0780041509.01.T01 MTR_7g112620 90.881 318 29 0 1 318 1 318 0.0 611
MsG0780041509.01.T01 MTR_7g112620 66.981 106 32 2 276 378 193 298 3.54e-35 131
MsG0780041509.01.T01 MTR_7g113020 88.050 318 38 0 1 318 1 318 0.0 598
MsG0780041509.01.T01 MTR_7g113020 60.000 105 39 2 277 378 194 298 2.36e-30 119
MsG0780041509.01.T01 MTR_7g112960 76.562 320 71 2 1 318 1 318 0.0 519
MsG0780041509.01.T01 MTR_7g112960 72.727 66 18 0 313 378 233 298 1.63e-24 102
MsG0780041509.01.T01 MTR_7g112963 76.562 320 71 2 1 318 1 318 0.0 515
MsG0780041509.01.T01 MTR_7g112963 72.727 66 18 0 313 378 233 298 4.07e-24 101
MsG0780041509.01.T01 MTR_7g112970 75.157 318 76 2 1 318 1 315 0.0 509
MsG0780041509.01.T01 MTR_7g112970 55.682 88 37 1 293 378 208 295 4.76e-23 98.6
MsG0780041509.01.T01 MTR_4g005160 72.981 322 82 3 1 318 1 321 0.0 506
MsG0780041509.01.T01 MTR_7g113050 95.378 238 11 0 1 238 1 238 7.99e-173 481
MsG0780041509.01.T01 MTR_7g112615 92.857 238 17 0 1 238 1 238 1.04e-167 468
MsG0780041509.01.T01 MTR_7g113010 71.025 283 78 2 1 281 1 281 8.04e-150 436
MsG0780041509.01.T01 MTR_7g113010 47.619 84 39 2 283 361 198 281 2.74e-14 74.7
MsG0780041509.01.T01 MTR_4g120240 60.625 320 122 3 1 318 37 354 4.74e-144 413
MsG0780041509.01.T01 MTR_4g120240 56.061 66 29 0 313 378 269 334 8.12e-18 84.3
MsG0780041509.01.T01 MTR_7g108825 61.635 318 120 2 1 318 1 316 3.27e-142 407
MsG0780041509.01.T01 MTR_7g108825 56.061 66 29 0 313 378 231 296 1.53e-18 85.9
MsG0780041509.01.T01 MTR_7g112615 94.340 159 9 0 1 159 1 159 1.14e-108 316
MsG0780041509.01.T01 MTR_8g076680 48.742 318 159 3 1 318 3 316 3.39e-107 318
MsG0780041509.01.T01 MTR_7g108825 60.924 238 91 2 1 238 1 236 2.95e-100 297
MsG0780041509.01.T01 MTR_7g112910 59.274 248 46 5 72 318 1 194 7.48e-92 274
MsG0780041509.01.T01 MTR_7g112910 45.631 103 28 4 276 378 100 174 1.59e-14 72.0
MsG0780041509.01.T01 MTR_1g083480 77.987 159 31 2 1 156 1 158 3.07e-88 264
MsG0780041509.01.T01 MTR_8g076680 50.000 238 117 2 1 238 3 238 4.99e-82 250
MsG0780041509.01.T01 MTR_2g090240 36.957 322 189 6 1 319 1 311 3.58e-66 213
MsG0780041509.01.T01 MTR_4g089060 37.578 322 186 6 1 319 1 310 5.31e-64 207
MsG0780041509.01.T01 MTR_2g090245 36.335 322 191 7 1 319 1 311 1.08e-63 206
MsG0780041509.01.T01 MTR_4g089040 37.578 322 186 6 1 319 1 310 1.88e-63 205
MsG0780041509.01.T01 MTR_3g024250 84.906 106 16 0 47 152 2 107 1.87e-61 194
MsG0780041509.01.T01 MTR_4g089060 34.957 349 185 7 1 319 1 337 5.87e-59 194
MsG0780041509.01.T01 MTR_4g089060 39.914 233 131 3 1 231 1 226 1.09e-52 175
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041509.01.T01 AT3G05600 60.991 323 121 4 1 318 1 323 2.50e-149 425
MsG0780041509.01.T01 AT3G05600 60.606 66 26 0 313 378 238 303 6.08e-21 92.8
MsG0780041509.01.T01 AT4G02340 58.438 320 126 4 1 318 1 315 9.35e-139 398
MsG0780041509.01.T01 AT4G02340 42.308 104 56 2 279 378 192 295 1.10e-18 86.3
MsG0780041509.01.T01 AT2G26740 60.748 321 119 4 4 318 1 320 4.91e-129 373
MsG0780041509.01.T01 AT2G26740 62.069 58 22 0 321 378 243 300 1.74e-15 77.0
MsG0780041509.01.T01 AT4G15960 54.012 324 142 3 1 318 51 373 4.84e-126 368
MsG0780041509.01.T01 AT4G15960 60.606 66 26 0 313 378 288 353 2.35e-19 89.0
MsG0780041509.01.T01 AT2G26750 58.934 319 125 4 4 317 1 318 4.29e-124 361
MsG0780041509.01.T01 AT2G26750 60.345 58 23 0 321 378 242 299 4.25e-15 75.9
MsG0780041509.01.T01 AT4G15955 51.242 322 119 4 5 315 6 300 7.09e-110 324
MsG0780041509.01.T01 AT4G15955 46.970 66 35 0 313 378 218 283 1.19e-11 65.5
MsG0780041509.01.T01 AT3G05600 61.728 243 88 4 1 238 1 243 4.47e-109 320
MsG0780041509.01.T01 AT3G51000 47.546 326 150 6 3 318 4 318 5.21e-103 307
MsG0780041509.01.T01 AT4G15955 59.770 174 60 2 5 168 6 179 9.47e-71 219
MsG0780041509.01.T01 AT4G15955 60.606 165 55 2 5 159 6 170 4.14e-67 210

Find 108 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATAGGCTTTGATTCTTTC+AGG 0.119767 7:-91848927 None:intergenic
GGCATCAACGGTCTTGATTT+TGG 0.153935 7:-91848982 None:intergenic
TACTCTCCTTTGGGAAATAT+TGG 0.228521 7:-91849733 None:intergenic
GGTAAGGTGTCAGGAGTATC+TGG 0.233107 7:-91849772 None:intergenic
CAAGGAAGATGTGCCGAATT+TGG 0.238850 7:+91853233 MsG0780041509.01.T01:CDS
TTATTATATCTGTAGATTTC+AGG 0.251191 7:+91849028 MsG0780041509.01.T01:CDS
TTGGGGTTTCTACGCATTAA+TGG 0.262210 7:-91848963 None:intergenic
GAAATTCATTACAGGTGATT+TGG 0.277422 7:+91850273 MsG0780041509.01.T01:CDS
CATTACAGGTGATTTGGATA+TGG 0.296487 7:+91850279 MsG0780041509.01.T01:CDS
TGTTTCTTGTTGGTCATGAT+TGG 0.327627 7:+91848868 MsG0780041509.01.T01:CDS
CACAGAACAGTGGAAGTAAA+TGG 0.328559 7:+91848597 MsG0780041509.01.T01:CDS
CGGTGATAATGCTTAAATAA+TGG 0.337780 7:-91848489 None:intergenic
AGCTGATGGCACCATGGAAT+GGG 0.338259 7:+91850230 MsG0780041509.01.T01:CDS
GAAGAAGTGATTATTCAAAA+AGG 0.341823 7:+91853255 MsG0780041509.01.T01:CDS
TCCAGTTCCATACTCTCCTT+TGG 0.342560 7:-91849743 None:intergenic
ATAATCACTTCTTCCAAATT+CGG 0.343356 7:-91853246 None:intergenic
GTCTCCAAATTTGAGAAAAC+AGG 0.355343 7:+91849829 MsG0780041509.01.T01:CDS
GATAATCACTTCTTCCAGAT+TGG 0.362380 7:-91850362 None:intergenic
GATGCCATGCGTGCTGCTTA+TGG 0.370336 7:+91848999 MsG0780041509.01.T01:CDS
ATCCTGACAACTCGGAAAAC+TGG 0.375136 7:+91849706 MsG0780041509.01.T01:CDS
CGCCAAGAGTACCAGAGTTC+AGG 0.381681 7:-91848684 None:intergenic
GTTTCTTGTTGGTCATGATT+GGG 0.381777 7:+91848869 MsG0780041509.01.T01:CDS
ATATTTCCCAAAGGAGAGTA+TGG 0.384636 7:+91849736 MsG0780041509.01.T01:CDS
AGCCAAGAGGGTAAGGTGTC+AGG 0.390169 7:-91849781 None:intergenic
CATGATTGGGGTGCTATCAT+TGG 0.391157 7:+91848882 MsG0780041509.01.T01:CDS
GAGAGCCGAGCGCCGCAATC+TGG 0.391586 7:-91848710 None:intergenic
CGCCACCAGATTGCGGCGCT+CGG 0.393265 7:+91848705 MsG0780041509.01.T01:CDS
GTCGATCAAGTGTTTCTTGT+TGG 0.393553 7:+91848858 MsG0780041509.01.T01:CDS
TTTGAGAAAACAGGCTTCAC+TGG 0.397561 7:+91849838 MsG0780041509.01.T01:CDS
ATCGCAGAAACCGGGCGAAA+TGG 0.400152 7:+91849639 MsG0780041509.01.T01:intron
GAAGAAGTGATTATCCAAAA+AGG 0.403789 7:+91850370 MsG0780041509.01.T01:CDS
CTCCTGACACCTTACCCTCT+TGG 0.407073 7:+91849779 MsG0780041509.01.T01:CDS
TCACCATAGCCACGCAGATC+TGG 0.413961 7:-91848753 None:intergenic
TTACTTGTATTGCAGAAATT+GGG 0.423076 7:+91850207 MsG0780041509.01.T01:intron
TTACTTGTATTGCAGAAATT+GGG 0.423076 7:+91853092 MsG0780041509.01.T01:intron
CCTGTTGTCCTGTTCCTTCA+CGG 0.424309 7:+91848657 MsG0780041509.01.T01:CDS
CCCAAAGGAGAGTATGGAAC+TGG 0.428533 7:+91849742 MsG0780041509.01.T01:CDS
GTGCCTGTGAAATTCATTAC+AGG 0.432209 7:+91850265 MsG0780041509.01.T01:CDS
CATAGGCTTTGATTCTTTCA+GGG 0.432762 7:-91848926 None:intergenic
CAAGGAAGATGTGCCCAATC+TGG 0.434486 7:+91850348 MsG0780041509.01.T01:CDS
TTCCTGAACTCTGGTACTCT+TGG 0.435109 7:+91848682 MsG0780041509.01.T01:CDS
ATAATCACTTCTTCCAGATT+GGG 0.447163 7:-91850361 None:intergenic
CCAGTTCCATACTCTCCTTT+GGG 0.449755 7:-91849742 None:intergenic
ATTGCGGCGCTCGGCTCTCT+CGG 0.459514 7:+91848714 MsG0780041509.01.T01:CDS
CAGGAAAGCCGTGAAGGAAC+AGG 0.460850 7:-91848665 None:intergenic
GAGCTGATGGCACCATGGAA+TGG 0.461653 7:+91850229 MsG0780041509.01.T01:CDS
TTCTGTAAGCCAAGAGGGTA+AGG 0.471828 7:-91849788 None:intergenic
GTACACCTCGTTTAACTTGA+AGG 0.472694 7:+91853188 MsG0780041509.01.T01:CDS
CCGTGAAGGAACAGGACAAC+AGG 0.481846 7:-91848657 None:intergenic
GCTCCAGATCTGCGTGGCTA+TGG 0.482806 7:+91848750 MsG0780041509.01.T01:CDS
AAAATGCATATTGCTGAGAA+AGG 0.485302 7:+91848624 MsG0780041509.01.T01:CDS
GAGCTAACTGCACCATGGAC+TGG 0.488644 7:+91853114 MsG0780041509.01.T01:CDS
ATCTGAGCTTCCATTTCGCC+CGG 0.491141 7:-91849649 None:intergenic
TTCACGGCTTTCCTGAACTC+TGG 0.502205 7:+91848673 MsG0780041509.01.T01:CDS
TCTCCTTTGGGAAATATTGG+AGG 0.507438 7:-91849730 None:intergenic
AGCCGAGCGCCGCAATCTGG+TGG 0.510220 7:-91848707 None:intergenic
TATCCATGGAGGAGGATTCA+AGG 0.519440 7:+91853215 MsG0780041509.01.T01:CDS
GAGAAAGAGAAACAGAGAGA+TGG 0.523788 7:+91848563 MsG0780041509.01.T01:exon
GGGCGAAATGGAAGCTCAGA+TGG 0.525021 7:+91849651 MsG0780041509.01.T01:CDS
ATGGAATGGGGTGAAAATCA+AGG 0.540835 7:+91850243 MsG0780041509.01.T01:CDS
GTACCTGTGAAATTCATAAC+GGG 0.540910 7:+91853150 MsG0780041509.01.T01:CDS
GAAGCTCAGATGGCTGAAGT+TGG 0.542944 7:+91849661 MsG0780041509.01.T01:CDS
TCACCCGTTATGAATTTCAC+AGG 0.547627 7:-91853153 None:intergenic
GTTGCACTTATAGATTTGCT+CGG 0.548076 7:+91848834 MsG0780041509.01.T01:CDS
ATTGCTGAGAAAGGAAAAGA+AGG 0.548522 7:+91848633 MsG0780041509.01.T01:CDS
TTATCTTTATCGCAGAAACC+GGG 0.558593 7:+91849631 MsG0780041509.01.T01:intron
TTTCTTGTTGGTCATGATTG+GGG 0.559325 7:+91848870 MsG0780041509.01.T01:CDS
GTGTAGCTACTAACTGAAGA+TGG 0.564708 7:-91848786 None:intergenic
AACTTGAAGGAGTATATCCA+TGG 0.565296 7:+91853201 MsG0780041509.01.T01:CDS
CTCTTGGCGCCACCAGATTG+CGG 0.567094 7:+91848698 MsG0780041509.01.T01:CDS
ATTGGGGTGCTATCATTGGT+TGG 0.568173 7:+91848886 MsG0780041509.01.T01:CDS
TCACCTGTAATGAATTTCAC+AGG 0.570947 7:-91850268 None:intergenic
TCTTCAGTTAGTAGCTACAC+AGG 0.571639 7:+91848789 MsG0780041509.01.T01:CDS
GGTACCTGTGAAATTCATAA+CGG 0.574244 7:+91853149 MsG0780041509.01.T01:CDS
ATCTCCATAAGCAGCACGCA+TGG 0.574955 7:-91849003 None:intergenic
TCATCTTCTGTAAGCCAAGA+GGG 0.578236 7:-91849793 None:intergenic
AAGAGAAACAGAGAGATGGA+AGG 0.578444 7:+91848567 MsG0780041509.01.T01:exon
GAAGGAGTATATCCATGGTG+GGG 0.578871 7:+91850321 MsG0780041509.01.T01:CDS
CTTCCTTGAATCCTCCTCCA+TGG 0.579859 7:-91853218 None:intergenic
TGAAGGAGTATATCCATGGT+GGG 0.583874 7:+91850320 MsG0780041509.01.T01:CDS
AAGGAGTATATCCATGGAGG+AGG 0.583972 7:+91853207 MsG0780041509.01.T01:CDS
TGGAACACTGAGACAAACAT+AGG 0.590336 7:-91848943 None:intergenic
GCCACGCAGATCTGGAGCAA+CGG 0.594783 7:-91848745 None:intergenic
AAGGAGTATATCCATGGTGG+GGG 0.600787 7:+91850322 MsG0780041509.01.T01:CDS
AGCAGCACGCATGGCATCAA+CGG 0.605048 7:-91848994 None:intergenic
GTAAGGTGTCAGGAGTATCT+GGG 0.606766 7:-91849771 None:intergenic
TTGCAGAAATTGGGAGCTGA+TGG 0.610067 7:+91850216 MsG0780041509.01.T01:intron
AACATGAAGGAGTATATCCA+TGG 0.620148 7:+91850316 MsG0780041509.01.T01:CDS
TAACAATGAAGAAGCAGCAG+AGG 0.620175 7:+91850405 MsG0780041509.01.T01:CDS
ATACTCCTTCATGTTTAGTG+AGG 0.623538 7:-91850308 None:intergenic
AGAGTTCAGGAAAGCCGTGA+AGG 0.628117 7:-91848671 None:intergenic
GCTGATGGCACCATGGAATG+GGG 0.628565 7:+91850231 MsG0780041509.01.T01:CDS
ATTTGGAGACAAAATAAGCA+AGG 0.634682 7:-91849816 None:intergenic
ATGGACTGGAGTGAAAATCA+AGG 0.637565 7:+91853128 MsG0780041509.01.T01:CDS
ATGAAGGAGTATATCCATGG+TGG 0.640343 7:+91850319 MsG0780041509.01.T01:CDS
ATTGGGAGCTGATGGCACCA+TGG 0.649732 7:+91850224 MsG0780041509.01.T01:CDS
CATAACGGGTGAGTTAGACA+TGG 0.654955 7:+91853164 MsG0780041509.01.T01:CDS
GTACACCTCACTAAACATGA+AGG 0.657206 7:+91850303 MsG0780041509.01.T01:CDS
GTCATCTTCTGTAAGCCAAG+AGG 0.661237 7:-91849794 None:intergenic
AGGAATAGAACACAGAACAG+TGG 0.676997 7:+91848587 MsG0780041509.01.T01:CDS
ATTGGGAGCTAACTGCACCA+TGG 0.687989 7:+91853109 MsG0780041509.01.T01:CDS
GGTCCTCCAATATTTCCCAA+AGG 0.693733 7:+91849727 MsG0780041509.01.T01:CDS
AAATATGAAGAAGTTTGATG+CGG 0.695050 7:-91848509 None:intergenic
GCCGTTGCTCCAGATCTGCG+TGG 0.702325 7:+91848744 MsG0780041509.01.T01:CDS
GCAGATCTGGAGCAACGGCG+CGG 0.714874 7:-91848740 None:intergenic
TTGAAGGAGTATATCCATGG+AGG 0.719753 7:+91853204 MsG0780041509.01.T01:CDS
GCAAATCTATAAGTGCAACA+AGG 0.736275 7:-91848830 None:intergenic
ATACTCCTTCAAGTTAAACG+AGG 0.750291 7:-91853193 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAACTTATGAAATATAA+AGG - Chr7:91851731-91851750 None:intergenic 10.0%
!! ATTAAAAATAAATTGTTTGA+TGG - Chr7:91851105-91851124 None:intergenic 10.0%
!! ATTTATATATCATTAGAAAT+AGG - Chr7:91853070-91853089 None:intergenic 10.0%
!!! AAATTTTAAAAAAATATGGA+TGG + Chr7:91852106-91852125 MsG0780041509.01.T01:intron 10.0%
!!! AATCATAATATTTTTTTAAG+GGG + Chr7:91849339-91849358 MsG0780041509.01.T01:intron 10.0%
!!! ATCAAACAATTTATTTTTAA+TGG + Chr7:91851104-91851123 MsG0780041509.01.T01:intron 10.0%
!!! GAATCATAATATTTTTTTAA+GGG + Chr7:91849338-91849357 MsG0780041509.01.T01:intron 10.0%
!!! TGAATCATAATATTTTTTTA+AGG + Chr7:91849337-91849356 MsG0780041509.01.T01:intron 10.0%
!!! TGTTATTTTTTTAATAAAAG+TGG - Chr7:91851219-91851238 None:intergenic 10.0%
!! AAAAAAAAAACACTTGATTA+AGG + Chr7:91849186-91849205 MsG0780041509.01.T01:intron 15.0%
!! AATAATTCATTTGATCAATT+TGG - Chr7:91851177-91851196 None:intergenic 15.0%
!! AATCCATTCATTAAAAAATA+TGG + Chr7:91851136-91851155 MsG0780041509.01.T01:intron 15.0%
!! TATAGAGATCTATAAAAAAA+AGG - Chr7:91849597-91849616 None:intergenic 15.0%
!!! ACAATTTATTTTTAATGGAT+TGG + Chr7:91851109-91851128 MsG0780041509.01.T01:intron 15.0%
!!! ATATTTAATCTGTTTTTCAT+TGG - Chr7:91851302-91851321 None:intergenic 15.0%
!!! ATCAAGTGTTTTTTTTTTTA+AGG - Chr7:91849184-91849203 None:intergenic 15.0%
!!! CCAATAATAGTTTTAAAAAA+TGG - Chr7:91850081-91850100 None:intergenic 15.0%
!!! CCATTTTTTAAAACTATTAT+TGG + Chr7:91850078-91850097 MsG0780041509.01.T01:intron 15.0%
!!! TATTTAATCTGTTTTTCATT+GGG - Chr7:91851301-91851320 None:intergenic 15.0%
!!! TATTTTTTAATGAATGGATT+AGG - Chr7:91851136-91851155 None:intergenic 15.0%
!!! TTGTTTTAAAAAATAAACGT+AGG + Chr7:91851795-91851814 MsG0780041509.01.T01:intron 15.0%
!!! TTTTTTTATTTCTTTATCAC+AGG + Chr7:91852504-91852523 MsG0780041509.01.T01:intron 15.0%
!! AAAATAAATTGTTTGATGGA+TGG - Chr7:91851101-91851120 None:intergenic 20.0%
!! AATATTATGATTCAACCATA+AGG - Chr7:91849331-91849350 None:intergenic 20.0%
!! AGTAACCAAAAAAAAAACAA+TGG - Chr7:91850657-91850676 None:intergenic 20.0%
!! ATCCATTAAAAAACTGAAAA+TGG + Chr7:91852140-91852159 MsG0780041509.01.T01:intron 20.0%
!! ATTAAAAAACTGAAAATGGA+TGG + Chr7:91852144-91852163 MsG0780041509.01.T01:intron 20.0%
!! CATTCATTAAAAAATATGGA+TGG + Chr7:91851140-91851159 MsG0780041509.01.T01:intron 20.0%
!! CTATATAAATGACAATTTAG+GGG - Chr7:91850951-91850970 None:intergenic 20.0%
!! GATTTCTTAAAGTAAATTAG+GGG - Chr7:91849091-91849110 None:intergenic 20.0%
!! GCTATATAAATGACAATTTA+GGG - Chr7:91850952-91850971 None:intergenic 20.0%
!! GGATTTCTTAAAGTAAATTA+GGG - Chr7:91849092-91849111 None:intergenic 20.0%
!! GTAACCAAAAAAAAAACAAT+GGG - Chr7:91850656-91850675 None:intergenic 20.0%
!! TCATCATATGATATCATAAT+GGG + Chr7:91852355-91852374 MsG0780041509.01.T01:intron 20.0%
!! TTAAAAAAATATGGATGGAT+TGG + Chr7:91852111-91852130 MsG0780041509.01.T01:intron 20.0%
!! TTATTATATCTGTAGATTTC+AGG + Chr7:91849028-91849047 MsG0780041509.01.T01:CDS 20.0%
!! TTTAAAAAATAAACGTAGGA+GGG + Chr7:91851799-91851818 MsG0780041509.01.T01:intron 20.0%
!! TTTAACTCTAAATATCTTTC+TGG + Chr7:91850566-91850585 MsG0780041509.01.T01:intron 20.0%
!!! AAATAAGCTGTTTTTTTTTG+AGG + Chr7:91852005-91852024 MsG0780041509.01.T01:intron 20.0%
!!! AAATACTTTTCCAAAAAGAA+AGG - Chr7:91852824-91852843 None:intergenic 20.0%
!!! AAGAAATCCCTAATATTTTA+TGG + Chr7:91849103-91849122 MsG0780041509.01.T01:intron 20.0%
!!! AATAAGCTGTTTTTTTTTGA+GGG + Chr7:91852006-91852025 MsG0780041509.01.T01:intron 20.0%
!!! AATTTTCTAATTCTTCAATC+AGG - Chr7:91851603-91851622 None:intergenic 20.0%
!!! AGAAATCCCTAATATTTTAT+GGG + Chr7:91849104-91849123 MsG0780041509.01.T01:intron 20.0%
!!! ATAAAAGTGGTTTTAATCAT+TGG - Chr7:91851206-91851225 None:intergenic 20.0%
!!! ATCCATTTTCAGTTTTTTAA+TGG - Chr7:91852145-91852164 None:intergenic 20.0%
!!! ATTTAATCTGTTTTTCATTG+GGG - Chr7:91851300-91851319 None:intergenic 20.0%
!!! ATTTTCAGTTTTTTAATGGA+TGG - Chr7:91852141-91852160 None:intergenic 20.0%
!!! CATCCATATTTTTTAATGAA+TGG - Chr7:91851142-91851161 None:intergenic 20.0%
!!! GAAAGATATTTAGAGTTAAA+CGG - Chr7:91850566-91850585 None:intergenic 20.0%
!!! GGATTTTATTTTTAATGGAT+TGG + Chr7:91852165-91852184 MsG0780041509.01.T01:intron 20.0%
!!! TATATGTTGACAATTCTTTT+TGG + Chr7:91849936-91849955 MsG0780041509.01.T01:intron 20.0%
!!! TCACTTCATTTTACATATTT+TGG - Chr7:91849367-91849386 None:intergenic 20.0%
!!! TGGATGGATTTTATTTTTAA+TGG + Chr7:91852160-91852179 MsG0780041509.01.T01:intron 20.0%
!!! TGTTTCTAAATTTGAGAAAA+CGG + Chr7:91852707-91852726 MsG0780041509.01.T01:intron 20.0%
!!! TTTCATTTAGCTTTCAAAAT+AGG + Chr7:91852235-91852254 MsG0780041509.01.T01:intron 20.0%
!!! TTTTAAAAAATAAACGTAGG+AGG + Chr7:91851798-91851817 MsG0780041509.01.T01:intron 20.0%
! AAAGATATCTTTGTATTGCT+AGG + Chr7:91851000-91851019 MsG0780041509.01.T01:intron 25.0%
! AAATATGAAGAAGTTTGATG+CGG - Chr7:91848512-91848531 None:intergenic 25.0%
! AACTTGTCCCATAAAATATT+AGG - Chr7:91849114-91849133 None:intergenic 25.0%
! AATGCATCTTTCATTAGAAT+TGG - Chr7:91850186-91850205 None:intergenic 25.0%
! ACTTGTCCCATAAAATATTA+GGG - Chr7:91849113-91849132 None:intergenic 25.0%
! ATAATCACTTCTTCCAAATT+CGG - Chr7:91853249-91853268 None:intergenic 25.0%
! ATATTTGTGGAAAACAACAA+AGG - Chr7:91849919-91849938 None:intergenic 25.0%
! ATTACTTGTATTGCAGAAAT+TGG + Chr7:91850206-91850225 MsG0780041509.01.T01:intron 25.0%
! ATTCATTTGATCAATTTGGA+TGG - Chr7:91851173-91851192 None:intergenic 25.0%
! CATAATAGTAACGTGTTTAA+CGG + Chr7:91850749-91850768 MsG0780041509.01.T01:intron 25.0%
! CATGTATGTTGTGTATTATT+AGG - Chr7:91850631-91850650 None:intergenic 25.0%
! CGCTATATAAATGACAATTT+AGG - Chr7:91850953-91850972 None:intergenic 25.0%
! CTCATCATATGATATCATAA+TGG + Chr7:91852354-91852373 MsG0780041509.01.T01:intron 25.0%
! GAAGAAGTGATTATTCAAAA+AGG + Chr7:91853255-91853274 MsG0780041509.01.T01:CDS 25.0%
! GAATTGTCAACATATATTTG+TGG - Chr7:91849932-91849951 None:intergenic 25.0%
! GGGATTTCTTAAAGTAAATT+AGG - Chr7:91849093-91849112 None:intergenic 25.0%
! GTTTCTAAATTTGAGAAAAC+GGG + Chr7:91852708-91852727 MsG0780041509.01.T01:intron 25.0%
! TATGAAATATAAAGGAGCTA+GGG - Chr7:91851723-91851742 None:intergenic 25.0%
! TGAAGAATTAGAAAATTTGC+AGG + Chr7:91851606-91851625 MsG0780041509.01.T01:intron 25.0%
! TGATTGAATATAACATGTGT+CGG - Chr7:91850055-91850074 None:intergenic 25.0%
! TTACTTGTATTGCAGAAATT+GGG + Chr7:91850207-91850226 MsG0780041509.01.T01:intron 25.0%
! TTATGAAATATAAAGGAGCT+AGG - Chr7:91851724-91851743 None:intergenic 25.0%
! TTCAGAAAAAAAGAAGAAGA+AGG - Chr7:91852417-91852436 None:intergenic 25.0%
!! ACAAGTCTTTTGAATTAAAC+AGG + Chr7:91850696-91850715 MsG0780041509.01.T01:intron 25.0%
!! ATCTATTTGACCTTTCTTTT+TGG + Chr7:91852811-91852830 MsG0780041509.01.T01:intron 25.0%
!! ATTTTAGATTAAAGACGTGT+CGG + Chr7:91852876-91852895 MsG0780041509.01.T01:intron 25.0%
!! CAAGTCTTTTGAATTAAACA+GGG + Chr7:91850697-91850716 MsG0780041509.01.T01:intron 25.0%
!! GTCAGAAACTAAAGTATTTA+AGG - Chr7:91851361-91851380 None:intergenic 25.0%
!!! AAAAGACTTGTTACAACAAT+GGG - Chr7:91850687-91850706 None:intergenic 25.0%
!!! TCTTCTTCTTTTTTTCTGAA+GGG + Chr7:91852417-91852436 MsG0780041509.01.T01:intron 25.0%
!!! TGATCCCATTGTTTTTTTTT+TGG + Chr7:91850649-91850668 MsG0780041509.01.T01:intron 25.0%
!!! TTCTTCTTCTTTTTTTCTGA+AGG + Chr7:91852416-91852435 MsG0780041509.01.T01:intron 25.0%
AAAATGCATATTGCTGAGAA+AGG + Chr7:91848624-91848643 MsG0780041509.01.T01:CDS 30.0%
AACAACACTCAACACAAAAT+TGG - Chr7:91850126-91850145 None:intergenic 30.0%
AAGATATCTTTAGATCGCAT+CGG - Chr7:91850991-91851010 None:intergenic 30.0%
AAGCAAGCATGAATGTATTA+GGG + Chr7:91852288-91852307 MsG0780041509.01.T01:intron 30.0%
AATCAAGTGTTAAACACACT+TGG - Chr7:91849268-91849287 None:intergenic 30.0%
ACAACTTCAAATACTAAGCA+TGG - Chr7:91851779-91851798 None:intergenic 30.0%
AGAAAGGTCAAATAGATTTG+TGG - Chr7:91852808-91852827 None:intergenic 30.0%
ATAATCACTTCTTCCAGATT+GGG - Chr7:91850364-91850383 None:intergenic 30.0%
ATAGATCTCTATATCATGAG+AGG + Chr7:91849402-91849421 MsG0780041509.01.T01:intron 30.0%
ATCAAGTGTTAAACACACTT+GGG - Chr7:91849267-91849286 None:intergenic 30.0%
ATTATCTTTATCGCAGAAAC+CGG + Chr7:91849630-91849649 MsG0780041509.01.T01:intron 30.0%
ATTTGGAGACAAAATAAGCA+AGG - Chr7:91849819-91849838 None:intergenic 30.0%
CATACAATACACCAAATGAT+GGG + Chr7:91849523-91849542 MsG0780041509.01.T01:intron 30.0%
GAAATTCATTACAGGTGATT+TGG + Chr7:91850273-91850292 MsG0780041509.01.T01:CDS 30.0%
GAAGAAGTGATTATCCAAAA+AGG + Chr7:91850370-91850389 MsG0780041509.01.T01:CDS 30.0%
GAGTTATCTTTGTGTCTAAA+TGG + Chr7:91852993-91853012 MsG0780041509.01.T01:intron 30.0%
TAAACAGGGTCAATGAAATT+TGG + Chr7:91850711-91850730 MsG0780041509.01.T01:intron 30.0%
TATTTCTTTATCACAGGAAC+CGG + Chr7:91852510-91852529 MsG0780041509.01.T01:intron 30.0%
TCATATGTAGATTACTGAGT+GGG - Chr7:91851648-91851667 None:intergenic 30.0%
TCTATAAAAAAAAGGCAACC+CGG - Chr7:91849589-91849608 None:intergenic 30.0%
TGAAAAATATCCTCACAACT+CGG + Chr7:91852578-91852597 MsG0780041509.01.T01:intron 30.0%
TGAAAAATATCCTGACAACT+CGG + Chr7:91849698-91849717 MsG0780041509.01.T01:CDS 30.0%
TTTCAAAATAGGAACCTTTG+TGG + Chr7:91852246-91852265 MsG0780041509.01.T01:intron 30.0%
TTTGATCAATTTGGATGGAT+TGG - Chr7:91851168-91851187 None:intergenic 30.0%
! AAATTGTTTGATGGATGGAT+CGG - Chr7:91851096-91851115 None:intergenic 30.0%
! ATGGAAGCTATGGATTTTAA+TGG - Chr7:91851760-91851779 None:intergenic 30.0%
! CGGTGATAATGCTTAAATAA+TGG - Chr7:91848492-91848511 None:intergenic 30.0%
! GAAGATTTGCTTATTAACGT+AGG + Chr7:91851431-91851450 MsG0780041509.01.T01:intron 30.0%
! GTTTGAAAAATTAAAGCACC+CGG + Chr7:91850860-91850879 MsG0780041509.01.T01:intron 30.0%
! TACACAGGTTTTCATATAGT+GGG + Chr7:91848804-91848823 MsG0780041509.01.T01:CDS 30.0%
! TCAGGCATAAAAAAGTATGT+AGG + Chr7:91851542-91851561 MsG0780041509.01.T01:intron 30.0%
!! CAAAAGACTTGTTACAACAA+TGG - Chr7:91850688-91850707 None:intergenic 30.0%
!! TAGCAGATAAACTTGTTAGT+TGG + Chr7:91851461-91851480 MsG0780041509.01.T01:intron 30.0%
!! TGAACAAGGAAATTGCTTTT+TGG + Chr7:91850904-91850923 MsG0780041509.01.T01:intron 30.0%
!!! CTTCTTCTTTTTTTCTGAAG+GGG + Chr7:91852418-91852437 MsG0780041509.01.T01:intron 30.0%
!!! GAACAAGGAAATTGCTTTTT+GGG + Chr7:91850905-91850924 MsG0780041509.01.T01:intron 30.0%
AAAAAATAAACGTAGGAGGG+AGG + Chr7:91851802-91851821 MsG0780041509.01.T01:intron 35.0%
AAAAATAAACGTAGGAGGGA+GGG + Chr7:91851803-91851822 MsG0780041509.01.T01:intron 35.0%
AATACTAAGCATGGAAGCTA+TGG - Chr7:91851770-91851789 None:intergenic 35.0%
ACTGAGTGGGTATTATCAAT+TGG - Chr7:91851635-91851654 None:intergenic 35.0%
AGTCAAAAGAGGAAACCTTA+TGG + Chr7:91849313-91849332 MsG0780041509.01.T01:intron 35.0%
AGTGATTATCCAAAAAGGAG+TGG + Chr7:91850375-91850394 MsG0780041509.01.T01:CDS 35.0%
AGTTGAGTCTAAGTCAAAAG+AGG + Chr7:91849302-91849321 MsG0780041509.01.T01:intron 35.0%
ATACTCCTTCATGTTTAGTG+AGG - Chr7:91850311-91850330 None:intergenic 35.0%
ATATTTCCCAAAGGAGAGTA+TGG + Chr7:91849736-91849755 MsG0780041509.01.T01:CDS 35.0%
ATTGCTGAGAAAGGAAAAGA+AGG + Chr7:91848633-91848652 MsG0780041509.01.T01:CDS 35.0%
ATTTCTTTATCACAGGAACC+GGG + Chr7:91852511-91852530 MsG0780041509.01.T01:intron 35.0%
CAAACTGTGAGTATAGTTAC+CGG - Chr7:91850886-91850905 None:intergenic 35.0%
CAAATCCAATCCAATCCAAT+AGG - Chr7:91852205-91852224 None:intergenic 35.0%
CAAGCAAGCATGAATGTATT+AGG + Chr7:91852287-91852306 MsG0780041509.01.T01:intron 35.0%
CGTATTATTAGTGATCCTTG+TGG - Chr7:91850606-91850625 None:intergenic 35.0%
CTATACTCACAGTTTGAACA+AGG + Chr7:91850890-91850909 MsG0780041509.01.T01:intron 35.0%
CTCATATGTAGATTACTGAG+TGG - Chr7:91851649-91851668 None:intergenic 35.0%
CTGAGTGGGTATTATCAATT+GGG - Chr7:91851634-91851653 None:intergenic 35.0%
GATAATCACTTCTTCCAGAT+TGG - Chr7:91850365-91850384 None:intergenic 35.0%
GATTGTTTCAAAGCTCCTAT+TGG + Chr7:91852187-91852206 MsG0780041509.01.T01:intron 35.0%
GATTTGTGGAAAACAAACTG+AGG - Chr7:91852794-91852813 None:intergenic 35.0%
GCAAATCTATAAGTGCAACA+AGG - Chr7:91848833-91848852 None:intergenic 35.0%
GCATACAATACACCAAATGA+TGG + Chr7:91849522-91849541 MsG0780041509.01.T01:intron 35.0%
GGTACCTGTGAAATTCATAA+CGG + Chr7:91853149-91853168 MsG0780041509.01.T01:CDS 35.0%
GTACCTGTGAAATTCATAAC+GGG + Chr7:91853150-91853169 MsG0780041509.01.T01:CDS 35.0%
GTCTCCAAATTTGAGAAAAC+AGG + Chr7:91849829-91849848 MsG0780041509.01.T01:CDS 35.0%
GTTTCTTGTTGGTCATGATT+GGG + Chr7:91848869-91848888 MsG0780041509.01.T01:CDS 35.0%
TATATCATGAGAGGTAACCT+TGG + Chr7:91849411-91849430 MsG0780041509.01.T01:intron 35.0%
TATCAACACATATCGAACAC+CGG - Chr7:91850025-91850044 None:intergenic 35.0%
TCACCTGTAATGAATTTCAC+AGG - Chr7:91850271-91850290 None:intergenic 35.0%
TCTATAGTAGTTCAATCCTC+CGG - Chr7:91852739-91852758 None:intergenic 35.0%
TGAGTGGGTATTATCAATTG+GGG - Chr7:91851633-91851652 None:intergenic 35.0%
TGTTTCTTGTTGGTCATGAT+TGG + Chr7:91848868-91848887 MsG0780041509.01.T01:CDS 35.0%
TTATCTTTATCGCAGAAACC+GGG + Chr7:91849631-91849650 MsG0780041509.01.T01:intron 35.0%
TTTCAAAGCTCCTATTGGAT+TGG + Chr7:91852192-91852211 MsG0780041509.01.T01:intron 35.0%
TTTCTTGTTGGTCATGATTG+GGG + Chr7:91848870-91848889 MsG0780041509.01.T01:CDS 35.0%
! AACATGAAGGAGTATATCCA+TGG + Chr7:91850316-91850335 MsG0780041509.01.T01:CDS 35.0%
! AACTTGAAGGAGTATATCCA+TGG + Chr7:91853201-91853220 MsG0780041509.01.T01:CDS 35.0%
! AATATAACATGTGTCGGTGT+CGG - Chr7:91850049-91850068 None:intergenic 35.0%
! ACATAGGCTTTGATTCTTTC+AGG - Chr7:91848930-91848949 None:intergenic 35.0%
! AGTCTTGGTGATTAAAACTG+TGG + Chr7:91851505-91851524 MsG0780041509.01.T01:intron 35.0%
! ATACTCCTTCAAGTTAAACG+AGG - Chr7:91853196-91853215 None:intergenic 35.0%
! CATAGGCTTTGATTCTTTCA+GGG - Chr7:91848929-91848948 None:intergenic 35.0%
! CATTACAGGTGATTTGGATA+TGG + Chr7:91850279-91850298 MsG0780041509.01.T01:CDS 35.0%
! CTAAGCTTTTCCTCGATTAT+TGG - Chr7:91851487-91851506 None:intergenic 35.0%
! CTACACAGGTTTTCATATAG+TGG + Chr7:91848803-91848822 MsG0780041509.01.T01:CDS 35.0%
! GAAGCCTGTTTTCTCAAATT+TGG - Chr7:91849836-91849855 None:intergenic 35.0%
! GTGGCTACATGTTAATTTTC+AGG + Chr7:91851524-91851543 MsG0780041509.01.T01:intron 35.0%
! GTTGCACTTATAGATTTGCT+CGG + Chr7:91848834-91848853 MsG0780041509.01.T01:CDS 35.0%
! TACTCTCCTTTGGGAAATAT+TGG - Chr7:91849736-91849755 None:intergenic 35.0%
!!! CTTTTTTCATGTGCCAGTTT+CGG - Chr7:91849240-91849259 None:intergenic 35.0%
AAAGCCTCTTGTGTGAAAAC+AGG + Chr7:91849491-91849510 MsG0780041509.01.T01:intron 40.0%
AAGAGAAACAGAGAGATGGA+AGG + Chr7:91848567-91848586 MsG0780041509.01.T01:exon 40.0%
AAGCCTCTTGTGTGAAAACA+GGG + Chr7:91849492-91849511 MsG0780041509.01.T01:intron 40.0%
AGCTACAATTTCTGCTGCTA+CGG - Chr7:91850833-91850852 None:intergenic 40.0%
AGGAATAGAACACAGAACAG+TGG + Chr7:91848587-91848606 MsG0780041509.01.T01:CDS 40.0%
ATACCCTCCATGGGAAAAAT+TGG - Chr7:91852616-91852635 None:intergenic 40.0%
ATCAACACATATCGAACACC+GGG - Chr7:91850024-91850043 None:intergenic 40.0%
ATCGAGGAAAAGCTTAGTCT+TGG + Chr7:91851490-91851509 MsG0780041509.01.T01:intron 40.0%
ATGGAATGGGGTGAAAATCA+AGG + Chr7:91850243-91850262 MsG0780041509.01.T01:CDS 40.0%
ATGTAGGCATGTAAGATCTG+AGG + Chr7:91851558-91851577 MsG0780041509.01.T01:intron 40.0%
ATTACCTAAAGCCACCACAA+AGG - Chr7:91852263-91852282 None:intergenic 40.0%
CAAAATAGGAACCTTTGTGG+TGG + Chr7:91852249-91852268 MsG0780041509.01.T01:intron 40.0%
CAACTTTATCAGTTACGCCA+AGG - Chr7:91849431-91849450 None:intergenic 40.0%
CACAGAACAGTGGAAGTAAA+TGG + Chr7:91848597-91848616 MsG0780041509.01.T01:CDS 40.0%
CCATCAAATCCATATCCATC+CGG + Chr7:91851049-91851068 MsG0780041509.01.T01:intron 40.0%
CCATTAGAACACAGAGACTA+CGG + Chr7:91851681-91851700 MsG0780041509.01.T01:intron 40.0%
CGAAACTGGCACATGAAAAA+AGG + Chr7:91849238-91849257 MsG0780041509.01.T01:intron 40.0%
GAGAAAGAGAAACAGAGAGA+TGG + Chr7:91848563-91848582 MsG0780041509.01.T01:exon 40.0%
GATAACTCACATAGAGAAGC+TGG - Chr7:91852981-91853000 None:intergenic 40.0%
GTACACCTCACTAAACATGA+AGG + Chr7:91850303-91850322 MsG0780041509.01.T01:CDS 40.0%
GTCGATCAAGTGTTTCTTGT+TGG + Chr7:91848858-91848877 MsG0780041509.01.T01:CDS 40.0%
GTGCCTGTGAAATTCATTAC+AGG + Chr7:91850265-91850284 MsG0780041509.01.T01:CDS 40.0%
GTGTAGCTACTAACTGAAGA+TGG - Chr7:91848789-91848808 None:intergenic 40.0%
GTTCAAAATAGCTCTCCACA+AGG + Chr7:91850588-91850607 MsG0780041509.01.T01:intron 40.0%
GTTGTAGTCATGTGACTGAA+AGG + Chr7:91849447-91849466 MsG0780041509.01.T01:intron 40.0%
TAACAATGAAGAAGCAGCAG+AGG + Chr7:91850405-91850424 MsG0780041509.01.T01:CDS 40.0%
TACGGTCTCATATACTCAGA+TGG - Chr7:91850815-91850834 None:intergenic 40.0%
TCACCCGTTATGAATTTCAC+AGG - Chr7:91853156-91853175 None:intergenic 40.0%
TCATCTTCTGTAAGCCAAGA+GGG - Chr7:91849796-91849815 None:intergenic 40.0%
TCATGCAACTACTAAGAACC+AGG - Chr7:91850513-91850532 None:intergenic 40.0%
TCTTCAGTTAGTAGCTACAC+AGG + Chr7:91848789-91848808 MsG0780041509.01.T01:CDS 40.0%
TGGAACACTGAGACAAACAT+AGG - Chr7:91848946-91848965 None:intergenic 40.0%
TGTAGGCATGTAAGATCTGA+GGG + Chr7:91851559-91851578 MsG0780041509.01.T01:intron 40.0%
TGTTAGTTGGCCAATAATCG+AGG + Chr7:91851474-91851493 MsG0780041509.01.T01:intron 40.0%
TTGCTGCTATGTCTATTTCC+TGG + Chr7:91850492-91850511 MsG0780041509.01.T01:intron 40.0%
TTGGGGTTTCTACGCATTAA+TGG - Chr7:91848966-91848985 None:intergenic 40.0%
TTTCAGTTTGAAGACATGCC+CGG + Chr7:91850003-91850022 MsG0780041509.01.T01:intron 40.0%
TTTGAGAAAACAGGCTTCAC+TGG + Chr7:91849838-91849857 MsG0780041509.01.T01:CDS 40.0%
! AAGCTCCTATTGGATTGGAT+TGG + Chr7:91852197-91852216 MsG0780041509.01.T01:intron 40.0%
! AATTTTTCCCATGGAGGGTA+TGG + Chr7:91852615-91852634 MsG0780041509.01.T01:intron 40.0%
! ATGAAGGAGTATATCCATGG+TGG + Chr7:91850319-91850338 MsG0780041509.01.T01:CDS 40.0%
! CATCAACGGTCTTGATTTTG+GGG - Chr7:91848983-91849002 None:intergenic 40.0%
! GAAAACAAACTGAGGCATCA+CGG - Chr7:91852786-91852805 None:intergenic 40.0%
! GCATCAACGGTCTTGATTTT+GGG - Chr7:91848984-91849003 None:intergenic 40.0%
! TCTCCTTTGGGAAATATTGG+AGG - Chr7:91849733-91849752 None:intergenic 40.0%
! TGAAGGAGTATATCCATGGT+GGG + Chr7:91850320-91850339 MsG0780041509.01.T01:CDS 40.0%
! TTACCCTGTTTTCACACAAG+AGG - Chr7:91849498-91849517 None:intergenic 40.0%
! TTGAAGGAGTATATCCATGG+AGG + Chr7:91853204-91853223 MsG0780041509.01.T01:CDS 40.0%
! TTGATTTTCACCCCATTCCA+TGG - Chr7:91850244-91850263 None:intergenic 40.0%
! TTGATTTTCACTCCAGTCCA+TGG - Chr7:91853129-91853148 None:intergenic 40.0%
! TTTGAGAAAACGGGTTTCAC+CGG + Chr7:91852717-91852736 MsG0780041509.01.T01:intron 40.0%
!! ATGGACTGGAGTGAAAATCA+AGG + Chr7:91853128-91853147 MsG0780041509.01.T01:CDS 40.0%
!! GTACACCTCGTTTAACTTGA+AGG + Chr7:91853188-91853207 MsG0780041509.01.T01:CDS 40.0%
AACACAGAGACTACGGAAGT+GGG + Chr7:91851688-91851707 MsG0780041509.01.T01:intron 45.0%
AACTCACATAGAGAAGCTGG+TGG - Chr7:91852978-91852997 None:intergenic 45.0%
ACTAAAGCTCCTGCATACGA+AGG - Chr7:91849563-91849582 None:intergenic 45.0%
AGGGGTTACAGAGAGAAAAG+TGG - Chr7:91849073-91849092 None:intergenic 45.0%
ATCATCTTCTGTGAGCCAAG+AGG - Chr7:91852676-91852695 None:intergenic 45.0%
ATCCTCACAACTCGGAAAAC+TGG + Chr7:91852586-91852605 MsG0780041509.01.T01:intron 45.0%
ATCCTGACAACTCGGAAAAC+TGG + Chr7:91849706-91849725 MsG0780041509.01.T01:CDS 45.0%
CAAGGAAGATGTGCCGAATT+TGG + Chr7:91853233-91853252 MsG0780041509.01.T01:CDS 45.0%
CCAGTTCCATACTCTCCTTT+GGG - Chr7:91849745-91849764 None:intergenic 45.0%
CCGGATGGATATGGATTTGA+TGG - Chr7:91851052-91851071 None:intergenic 45.0%
CCGTAGTCTCTGTGTTCTAA+TGG - Chr7:91851684-91851703 None:intergenic 45.0%
CTAAAGCTCCTGCATACGAA+GGG - Chr7:91849562-91849581 None:intergenic 45.0%
GGTCCTCCAATATTTCCCAA+AGG + Chr7:91849727-91849746 MsG0780041509.01.T01:CDS 45.0%
GGTCTCATATACTCAGATGG+AGG - Chr7:91850812-91850831 None:intergenic 45.0%
GTATGGAACTGGGTTCAATC+CGG + Chr7:91852632-91852651 MsG0780041509.01.T01:intron 45.0%
GTCATCTTCTGTAAGCCAAG+AGG - Chr7:91849797-91849816 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+CGG + Chr7:91849453-91849472 MsG0780041509.01.T01:intron 45.0%
GTGTCTCATGCATGTGTTAG+TGG + Chr7:91853029-91853048 MsG0780041509.01.T01:intron 45.0%
TATCCATGGAGGAGGATTCA+AGG + Chr7:91853215-91853234 MsG0780041509.01.T01:CDS 45.0%
TATTGCTAGGCCCCTAACTA+GGG + Chr7:91851013-91851032 MsG0780041509.01.T01:intron 45.0%
TCATCTTCTGTGAGCCAAGA+GGG - Chr7:91852675-91852694 None:intergenic 45.0%
TCATGTGACTGAAAGGTCAC+GGG + Chr7:91849454-91849473 MsG0780041509.01.T01:intron 45.0%
TCCAGTTCCATACTCTCCTT+TGG - Chr7:91849746-91849765 None:intergenic 45.0%
TTCCTGAACTCTGGTACTCT+TGG + Chr7:91848682-91848701 MsG0780041509.01.T01:CDS 45.0%
TTCTGTAAGCCAAGAGGGTA+AGG - Chr7:91849791-91849810 None:intergenic 45.0%
TTGAACTAGCTCACCGAAAC+TGG + Chr7:91849224-91849243 MsG0780041509.01.T01:intron 45.0%
TTGCAGAAATTGGGAGCTGA+TGG + Chr7:91850216-91850235 MsG0780041509.01.T01:intron 45.0%
! AAGGAGTATATCCATGGAGG+AGG + Chr7:91853207-91853226 MsG0780041509.01.T01:CDS 45.0%
! AAGGAGTATATCCATGGTGG+GGG + Chr7:91850322-91850341 MsG0780041509.01.T01:CDS 45.0%
! ATTGGGGTGCTATCATTGGT+TGG + Chr7:91848886-91848905 MsG0780041509.01.T01:CDS 45.0%
! CATGATTGGGGTGCTATCAT+TGG + Chr7:91848882-91848901 MsG0780041509.01.T01:CDS 45.0%
! CCTCCAATTTTTCCCATGGA+GGG + Chr7:91852610-91852629 MsG0780041509.01.T01:intron 45.0%
! GAAAAATTAAAGCACCCGGC+CGG + Chr7:91850864-91850883 MsG0780041509.01.T01:intron 45.0%
! GAAGGAGTATATCCATGGTG+GGG + Chr7:91850321-91850340 MsG0780041509.01.T01:CDS 45.0%
! GGCATCAACGGTCTTGATTT+TGG - Chr7:91848985-91849004 None:intergenic 45.0%
! GTCTTATTGCAAGTCTGCAC+TGG + Chr7:91852318-91852337 MsG0780041509.01.T01:intron 45.0%
! TAAAGTGCGCCACTCCTTTT+TGG - Chr7:91850387-91850406 None:intergenic 45.0%
! TCCTCCAATTTTTCCCATGG+AGG + Chr7:91852609-91852628 MsG0780041509.01.T01:intron 45.0%
! TGGTCCTCCAATTTTTCCCA+TGG + Chr7:91852606-91852625 MsG0780041509.01.T01:intron 45.0%
! TGTTTGATGGATGGATCGGA+TGG - Chr7:91851092-91851111 None:intergenic 45.0%
!! CATAACGGGTGAGTTAGACA+TGG + Chr7:91853164-91853183 MsG0780041509.01.T01:CDS 45.0%
!! CGGATGGATTTTGTGATGGA+TGG - Chr7:91851076-91851095 None:intergenic 45.0%
!! GGATCGGATGGATTTTGTGA+TGG - Chr7:91851080-91851099 None:intergenic 45.0%
!! GTAAGGTGTCAGGAGTATCT+GGG - Chr7:91849774-91849793 None:intergenic 45.0%
!! TCACACAAGAGGCTTTTTCC+AGG - Chr7:91849487-91849506 None:intergenic 45.0%
!!! GGATTTTGTGATGGATGGAC+CGG - Chr7:91851071-91851090 None:intergenic 45.0%
!!! TATGAAATTTTAAAAAAATA+TGG + Chr7:91852102-91852121 MsG0780041509.01.T01:intron 5.0%
AGAGTTCAGGAAAGCCGTGA+AGG - Chr7:91848674-91848693 None:intergenic 50.0%
AGCTGATGGCACCATGGAAT+GGG + Chr7:91850230-91850249 MsG0780041509.01.T01:CDS 50.0%
ATCTCCATAAGCAGCACGCA+TGG - Chr7:91849006-91849025 None:intergenic 50.0%
ATCTGAGCTTCCATTTCGCC+CGG - Chr7:91849652-91849671 None:intergenic 50.0%
ATGGATGGACCGGATGGATA+TGG - Chr7:91851061-91851080 None:intergenic 50.0%
ATTGCTAGGCCCCTAACTAG+GGG + Chr7:91851014-91851033 MsG0780041509.01.T01:intron 50.0%
ATTGGGAGCTAACTGCACCA+TGG + Chr7:91853109-91853128 MsG0780041509.01.T01:CDS 50.0%
CAAGGAAGATGTGCCCAATC+TGG + Chr7:91850348-91850367 MsG0780041509.01.T01:CDS 50.0%
CAATTGCCACCCCTAGTTAG+GGG - Chr7:91851026-91851045 None:intergenic 50.0%
CATACGAAGGGTCTGGAAAG+GGG - Chr7:91849550-91849569 None:intergenic 50.0%
CCAATTGCCACCCCTAGTTA+GGG - Chr7:91851027-91851046 None:intergenic 50.0%
CCCTCCATGGGAAAAATTGG+AGG - Chr7:91852613-91852632 None:intergenic 50.0%
CCTGTTGTCCTGTTCCTTCA+CGG + Chr7:91848657-91848676 MsG0780041509.01.T01:CDS 50.0%
CTGTGAGTATAGTTACCGGC+CGG - Chr7:91850882-91850901 None:intergenic 50.0%
CTTCCTTGAATCCTCCTCCA+TGG - Chr7:91853221-91853240 None:intergenic 50.0%
GAACACAGAGACTACGGAAG+TGG + Chr7:91851687-91851706 MsG0780041509.01.T01:intron 50.0%
GAAGCTCAGATGGCTGAAGT+TGG + Chr7:91849661-91849680 MsG0780041509.01.T01:CDS 50.0%
GCATACGAAGGGTCTGGAAA+GGG - Chr7:91849551-91849570 None:intergenic 50.0%
GGAACCTTTGTGGTGGCTTT+AGG + Chr7:91852256-91852275 MsG0780041509.01.T01:intron 50.0%
GTATTGCTAGGCCCCTAACT+AGG + Chr7:91851012-91851031 MsG0780041509.01.T01:intron 50.0%
TCCAATTGCCACCCCTAGTT+AGG - Chr7:91851028-91851047 None:intergenic 50.0%
TGCATACGAAGGGTCTGGAA+AGG - Chr7:91849552-91849571 None:intergenic 50.0%
TGGAAAGGGGTCCCATCATT+TGG - Chr7:91849537-91849556 None:intergenic 50.0%
TGTGAGTATAGTTACCGGCC+GGG - Chr7:91850881-91850900 None:intergenic 50.0%
TTCACGGCTTTCCTGAACTC+TGG + Chr7:91848673-91848692 MsG0780041509.01.T01:CDS 50.0%
TTTCCAGACCCTTCGTATGC+AGG + Chr7:91849551-91849570 MsG0780041509.01.T01:intron 50.0%
! ATGCAGGAGCTTTAGTGCAC+CGG + Chr7:91849567-91849586 MsG0780041509.01.T01:intron 50.0%
! CCCAAAGGAGAGTATGGAAC+TGG + Chr7:91849742-91849761 MsG0780041509.01.T01:CDS 50.0%
! GACCAGTTTTCCGAGTTGTC+AGG - Chr7:91849711-91849730 None:intergenic 50.0%
! GACCAGTTTTCCGAGTTGTG+AGG - Chr7:91852591-91852610 None:intergenic 50.0%
! TATCCATGGTGGGGGATTCA+AGG + Chr7:91850330-91850349 MsG0780041509.01.T01:CDS 50.0%
!! GGTAAGGTGTCAGGAGTATC+TGG - Chr7:91849775-91849794 None:intergenic 50.0%
!! TTTGTGATGGATGGACCGGA+TGG - Chr7:91851067-91851086 None:intergenic 50.0%
AACCGGGCGAAATGGAAGCT+CGG + Chr7:91849647-91849666 MsG0780041509.01.T01:CDS 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + Chr7:91849466-91849485 MsG0780041509.01.T01:intron 55.0%
ACCCAGTTCCATACCCTCCA+TGG - Chr7:91852626-91852645 None:intergenic 55.0%
ACGTAGGAGGGAGGGAGAAA+TGG + Chr7:91851811-91851830 MsG0780041509.01.T01:intron 55.0%
AGCAGCACGCATGGCATCAA+CGG - Chr7:91848997-91849016 None:intergenic 55.0%
AGGAGGGAGGGAGAAATGGA+GGG + Chr7:91851815-91851834 MsG0780041509.01.T01:intron 55.0%
ATCACAGGAACCGGGCGAAA+TGG + Chr7:91852519-91852538 MsG0780041509.01.T01:intron 55.0%
ATCCGAGCTTCCATTTCGCC+CGG - Chr7:91852532-91852551 None:intergenic 55.0%
ATCGCAGAAACCGGGCGAAA+TGG + Chr7:91849639-91849658 MsG0780041509.01.T01:intron 55.0%
ATTGGGAGCTGATGGCACCA+TGG + Chr7:91850224-91850243 MsG0780041509.01.T01:CDS 55.0%
CAGGAAAGCCGTGAAGGAAC+AGG - Chr7:91848668-91848687 None:intergenic 55.0%
CCCAGTTCCATACCCTCCAT+GGG - Chr7:91852625-91852644 None:intergenic 55.0%
CCCTAACTAGGGGTGGCAAT+TGG + Chr7:91851024-91851043 MsG0780041509.01.T01:intron 55.0%
CCGTGAAGGAACAGGACAAC+AGG - Chr7:91848660-91848679 None:intergenic 55.0%
CTCCTGACACCTTACCCTCT+TGG + Chr7:91849779-91849798 MsG0780041509.01.T01:CDS 55.0%
CTTCCTTGAATCCCCCACCA+TGG - Chr7:91850336-91850355 None:intergenic 55.0%
GAAGCTCGGATGGCTGAAGT+TGG + Chr7:91852541-91852560 MsG0780041509.01.T01:intron 55.0%
GAGCCAAGAGGGCAAGGTAT+CGG - Chr7:91852664-91852683 None:intergenic 55.0%
GAGCTAACTGCACCATGGAC+TGG + Chr7:91853114-91853133 MsG0780041509.01.T01:CDS 55.0%
GAGCTGATGGCACCATGGAA+TGG + Chr7:91850229-91850248 MsG0780041509.01.T01:CDS 55.0%
GCTGATGGCACCATGGAATG+GGG + Chr7:91850231-91850250 MsG0780041509.01.T01:CDS 55.0%
GGGCGAAATGGAAGCTCAGA+TGG + Chr7:91849651-91849670 MsG0780041509.01.T01:CDS 55.0%
TAGGAGGGAGGGAGAAATGG+AGG + Chr7:91851814-91851833 MsG0780041509.01.T01:intron 55.0%
TAGGGGCCTACGAGCAAGTA+GGG - Chr7:91850934-91850953 None:intergenic 55.0%
TCACCATAGCCACGCAGATC+TGG - Chr7:91848756-91848775 None:intergenic 55.0%
TCGCATCGGATCGCAACTTC+TGG - Chr7:91850977-91850996 None:intergenic 55.0%
TTAGGGGCCTACGAGCAAGT+AGG - Chr7:91850935-91850954 None:intergenic 55.0%
TTCTGTGAGCCAAGAGGGCA+AGG - Chr7:91852670-91852689 None:intergenic 55.0%
! AGCCAAGAGGGCAAGGTATC+GGG - Chr7:91852663-91852682 None:intergenic 55.0%
! AGCCAAGAGGGTAAGGTGTC+AGG - Chr7:91849784-91849803 None:intergenic 55.0%
! CCCATGGAGGGTATGGAACT+GGG + Chr7:91852622-91852641 MsG0780041509.01.T01:intron 55.0%
! GAGAAAACGGGTTTCACCGG+AGG + Chr7:91852720-91852739 MsG0780041509.01.T01:intron 55.0%
! TCCCATGGAGGGTATGGAAC+TGG + Chr7:91852621-91852640 MsG0780041509.01.T01:intron 55.0%
! TGCAGGAGCTTTAGTGCACC+GGG + Chr7:91849568-91849587 MsG0780041509.01.T01:intron 55.0%
!! CGCCAAGAGTACCAGAGTTC+AGG - Chr7:91848687-91848706 None:intergenic 55.0%
!! GATGCCATGCGTGCTGCTTA+TGG + Chr7:91848999-91849018 MsG0780041509.01.T01:CDS 55.0%
AGGGGCCTACGAGCAAGTAG+GGG - Chr7:91850933-91850952 None:intergenic 60.0%
CTCTTGGCGCCACCAGATTG+CGG + Chr7:91848698-91848717 MsG0780041509.01.T01:CDS 60.0%
GCTCCAGATCTGCGTGGCTA+TGG + Chr7:91848750-91848769 MsG0780041509.01.T01:CDS 60.0%
GCTCCTGCATACGAAGGGTC+TGG - Chr7:91849557-91849576 None:intergenic 60.0%
GGGCGAAATGGAAGCTCGGA+TGG + Chr7:91852531-91852550 MsG0780041509.01.T01:intron 60.0%
! GCCACGCAGATCTGGAGCAA+CGG - Chr7:91848748-91848767 None:intergenic 60.0%
!! CCAAGAGGGCAAGGTATCGG+GGG - Chr7:91852661-91852680 None:intergenic 60.0%
!! GCCAAGAGGGCAAGGTATCG+GGG - Chr7:91852662-91852681 None:intergenic 60.0%
!! GGCAAGGTATCGGGGGTATC+CGG - Chr7:91852654-91852673 None:intergenic 60.0%
ATTGCGGCGCTCGGCTCTCT+CGG + Chr7:91848714-91848733 MsG0780041509.01.T01:CDS 65.0%
CCCCCGATACCTTGCCCTCT+TGG + Chr7:91852658-91852677 MsG0780041509.01.T01:intron 65.0%
GCCGTTGCTCCAGATCTGCG+TGG + Chr7:91848744-91848763 MsG0780041509.01.T01:CDS 65.0%
GCTAGGCCCCTAACTAGGGG+TGG + Chr7:91851017-91851036 MsG0780041509.01.T01:intron 65.0%
GGGGCCTACGAGCAAGTAGG+GGG - Chr7:91850932-91850951 None:intergenic 65.0%
GGGTCCCCCTACTTGCTCGT+AGG + Chr7:91850925-91850944 MsG0780041509.01.T01:intron 65.0%
! GCAGATCTGGAGCAACGGCG+CGG - Chr7:91848743-91848762 None:intergenic 65.0%
CGCCACCAGATTGCGGCGCT+CGG + Chr7:91848705-91848724 MsG0780041509.01.T01:CDS 70.0%
! AGCCGAGCGCCGCAATCTGG+TGG - Chr7:91848710-91848729 None:intergenic 70.0%
! GAGAGCCGAGCGCCGCAATC+TGG - Chr7:91848713-91848732 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 91848471 91853290 91848471 ID=MsG0780041509.01;Name=MsG0780041509.01
Chr7 mRNA 91848471 91853290 91848471 ID=MsG0780041509.01.T01;Parent=MsG0780041509.01;Name=MsG0780041509.01.T01;_AED=0.47;_eAED=0.47;_QI=111|0.66|0.5|1|1|1|4|0|378
Chr7 exon 91848471 91849049 91848471 ID=MsG0780041509.01.T01:exon:53398;Parent=MsG0780041509.01.T01
Chr7 exon 91849646 91849890 91849646 ID=MsG0780041509.01.T01:exon:53399;Parent=MsG0780041509.01.T01
Chr7 exon 91850222 91850461 91850222 ID=MsG0780041509.01.T01:exon:53400;Parent=MsG0780041509.01.T01
Chr7 exon 91853107 91853290 91853107 ID=MsG0780041509.01.T01:exon:53401;Parent=MsG0780041509.01.T01
Chr7 five_prime_UTR 91848471 91848581 91848471 ID=MsG0780041509.01.T01:five_prime_utr;Parent=MsG0780041509.01.T01
Chr7 CDS 91848582 91849049 91848582 ID=MsG0780041509.01.T01:cds;Parent=MsG0780041509.01.T01
Chr7 CDS 91849646 91849890 91849646 ID=MsG0780041509.01.T01:cds;Parent=MsG0780041509.01.T01
Chr7 CDS 91850222 91850461 91850222 ID=MsG0780041509.01.T01:cds;Parent=MsG0780041509.01.T01
Chr7 CDS 91853107 91853290 91853107 ID=MsG0780041509.01.T01:cds;Parent=MsG0780041509.01.T01
Gene Sequence

>MsG0780041509.01.T01

ATGGAAGGAATAGAACACAGAACAGTGGAAGTAAATGGAATCAAAATGCATATTGCTGAGAAAGGAAAAGAAGGACCTGTTGTCCTGTTCCTTCACGGCTTTCCTGAACTCTGGTACTCTTGGCGCCACCAGATTGCGGCGCTCGGCTCTCTCGGATACCGCGCCGTTGCTCCAGATCTGCGTGGCTATGGTGACACTGAAGCTCCATCTTCAGTTAGTAGCTACACAGGTTTTCATATAGTGGGTGACCTTGTTGCACTTATAGATTTGCTCGGTGTCGATCAAGTGTTTCTTGTTGGTCATGATTGGGGTGCTATCATTGGTTGGTATCTTTGCATGTTTCGCCCTGAAAGAATCAAAGCCTATGTTTGTCTCAGTGTTCCATTAATGCGTAGAAACCCCAAAATCAAGACCGTTGATGCCATGCGTGCTGCTTATGGAGATGATTATTATATCTGTAGATTTCAGAAACCGGGCGAAATGGAAGCTCAGATGGCTGAAGTTGGCACTGCATATGTGATGAAAAATATCCTGACAACTCGGAAAACTGGTCCTCCAATATTTCCCAAAGGAGAGTATGGAACTGGATTCAACCCAGATACTCCTGACACCTTACCCTCTTGGCTTACAGAAGATGACCTTGCTTATTTTGTCTCCAAATTTGAGAAAACAGGCTTCACTGGAGCATTGAACTACTACAGAAACTTTAACTTAAATTGGGAGCTGATGGCACCATGGAATGGGGTGAAAATCAAGGTGCCTGTGAAATTCATTACAGGTGATTTGGATATGGTGTACACCTCACTAAACATGAAGGAGTATATCCATGGTGGGGGATTCAAGGAAGATGTGCCCAATCTGGAAGAAGTGATTATCCAAAAAGGAGTGGCGCACTTTAACAATGAAGAAGCAGCAGAGGAAATAAGTAATCACATTTATGAATTCATCAAGAAAAATTGGGAGCTAACTGCACCATGGACTGGAGTGAAAATCAAGGTACCTGTGAAATTCATAACGGGTGAGTTAGACATGGTGTACACCTCGTTTAACTTGAAGGAGTATATCCATGGAGGAGGATTCAAGGAAGATGTGCCGAATTTGGAAGAAGTGATTATTCAAAAAGGAGTTGCTCACTGA
Protein sequence

>MsG0780041509.01.T01

MEGIEHRTVEVNGIKMHIAEKGKEGPVVLFLHGFPELWYSWRHQIAALGSLGYRAVAPDLRGYGDTEAPSSVSSYTGFHIVGDLVALIDLLGVDQVFLVGHDWGAIIGWYLCMFRPERIKAYVCLSVPLMRRNPKIKTVDAMRAAYGDDYYICRFQKPGEMEAQMAEVGTAYVMKNILTTRKTGPPIFPKGEYGTGFNPDTPDTLPSWLTEDDLAYFVSKFEKTGFTGALNYYRNFNLNWELMAPWNGVKIKVPVKFITGDLDMVYTSLNMKEYIHGGGFKEDVPNLEEVIIQKGVAHFNNEEAAEEISNHIYEFIKKNWELTAPWTGVKIKVPVKFITGELDMVYTSFNLKEYIHGGGFKEDVPNLEEVIIQKGVAH*