Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047066.01.T01 | XP_013458267.3 | 95.349 | 344 | 16 | 0 | 8 | 351 | 12 | 355 | 0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047066.01.T01 | I6YGS0 | 36.025 | 322 | 184 | 7 | 38 | 348 | 6 | 316 | 2.75E-60 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047066.01.T01 | A0A072UTA2 | 95.349 | 344 | 16 | 0 | 8 | 351 | 12 | 355 | 0.0 | 687 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047066.01.T01 | MTR_4g120240 | 95.349 | 344 | 16 | 0 | 8 | 351 | 12 | 355 | 0.0 | 687 |
| MsG0880047066.01.T01 | MTR_7g108825 | 61.442 | 319 | 121 | 1 | 33 | 351 | 1 | 317 | 6.61e-149 | 422 |
| MsG0880047066.01.T01 | MTR_7g112970 | 61.562 | 320 | 118 | 3 | 33 | 351 | 1 | 316 | 1.00e-148 | 422 |
| MsG0880047066.01.T01 | MTR_7g113020 | 62.305 | 321 | 117 | 3 | 33 | 351 | 1 | 319 | 3.76e-147 | 418 |
| MsG0880047066.01.T01 | MTR_7g112960 | 61.994 | 321 | 118 | 3 | 33 | 351 | 1 | 319 | 1.05e-146 | 417 |
| MsG0880047066.01.T01 | MTR_7g112963 | 61.682 | 321 | 119 | 3 | 33 | 351 | 1 | 319 | 2.31e-146 | 416 |
| MsG0880047066.01.T01 | MTR_7g113050 | 60.436 | 321 | 123 | 3 | 33 | 351 | 1 | 319 | 5.21e-145 | 412 |
| MsG0880047066.01.T01 | MTR_7g112615 | 60.436 | 321 | 123 | 3 | 33 | 351 | 1 | 319 | 2.90e-144 | 410 |
| MsG0880047066.01.T01 | MTR_7g113030 | 59.813 | 321 | 125 | 3 | 33 | 351 | 1 | 319 | 2.31e-143 | 409 |
| MsG0880047066.01.T01 | MTR_7g112620 | 59.502 | 321 | 126 | 3 | 33 | 351 | 1 | 319 | 1.26e-141 | 404 |
| MsG0880047066.01.T01 | MTR_4g005160 | 56.173 | 324 | 135 | 4 | 33 | 351 | 1 | 322 | 3.80e-132 | 380 |
| MsG0880047066.01.T01 | MTR_7g113010 | 61.484 | 283 | 105 | 3 | 33 | 313 | 1 | 281 | 9.94e-125 | 370 |
| MsG0880047066.01.T01 | MTR_7g113050 | 62.083 | 240 | 87 | 3 | 33 | 270 | 1 | 238 | 1.57e-106 | 312 |
| MsG0880047066.01.T01 | MTR_8g076680 | 47.352 | 321 | 165 | 3 | 31 | 351 | 1 | 317 | 2.15e-105 | 312 |
| MsG0880047066.01.T01 | MTR_7g112615 | 61.250 | 240 | 89 | 3 | 33 | 270 | 1 | 238 | 1.86e-104 | 306 |
| MsG0880047066.01.T01 | MTR_7g108825 | 59.664 | 238 | 94 | 1 | 33 | 270 | 1 | 236 | 7.75e-103 | 302 |
| MsG0880047066.01.T01 | MTR_8g076680 | 49.167 | 240 | 120 | 1 | 31 | 270 | 1 | 238 | 2.98e-81 | 248 |
| MsG0880047066.01.T01 | MTR_7g112615 | 63.529 | 170 | 58 | 3 | 33 | 200 | 1 | 168 | 4.61e-73 | 224 |
| MsG0880047066.01.T01 | MTR_1g083480 | 60.000 | 160 | 59 | 2 | 33 | 189 | 1 | 158 | 7.19e-67 | 209 |
| MsG0880047066.01.T01 | MTR_2g090245 | 36.025 | 322 | 190 | 9 | 33 | 350 | 1 | 310 | 3.77e-59 | 193 |
| MsG0880047066.01.T01 | MTR_2g090240 | 34.161 | 322 | 196 | 8 | 33 | 350 | 1 | 310 | 5.99e-59 | 193 |
| MsG0880047066.01.T01 | MTR_4g089060 | 34.675 | 323 | 192 | 9 | 33 | 350 | 1 | 309 | 1.57e-57 | 189 |
| MsG0880047066.01.T01 | MTR_4g089040 | 33.022 | 321 | 200 | 7 | 33 | 350 | 1 | 309 | 8.57e-56 | 184 |
| MsG0880047066.01.T01 | MTR_4g089060 | 32.286 | 350 | 191 | 10 | 33 | 350 | 1 | 336 | 1.88e-52 | 177 |
| MsG0880047066.01.T01 | MTR_7g112910 | 41.129 | 248 | 88 | 7 | 106 | 351 | 4 | 195 | 2.37e-50 | 167 |
| MsG0880047066.01.T01 | MTR_4g089060 | 35.745 | 235 | 138 | 6 | 33 | 263 | 1 | 226 | 8.30e-45 | 154 |
| MsG0880047066.01.T01 | MTR_3g024250 | 57.009 | 107 | 44 | 1 | 79 | 185 | 3 | 107 | 1.67e-35 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047066.01.T01 | AT4G02340 | 59.875 | 319 | 125 | 2 | 33 | 351 | 1 | 316 | 5.83e-150 | 426 |
| MsG0880047066.01.T01 | AT4G15960 | 59.077 | 325 | 128 | 1 | 32 | 351 | 50 | 374 | 1.49e-149 | 426 |
| MsG0880047066.01.T01 | AT3G05600 | 56.481 | 324 | 136 | 2 | 33 | 351 | 1 | 324 | 6.15e-140 | 400 |
| MsG0880047066.01.T01 | AT2G26740 | 57.632 | 321 | 131 | 3 | 36 | 351 | 1 | 321 | 3.81e-130 | 375 |
| MsG0880047066.01.T01 | AT2G26750 | 55.625 | 320 | 138 | 2 | 36 | 351 | 1 | 320 | 1.44e-127 | 369 |
| MsG0880047066.01.T01 | AT4G15955 | 54.321 | 324 | 114 | 4 | 37 | 351 | 6 | 304 | 3.24e-122 | 354 |
| MsG0880047066.01.T01 | AT3G51000 | 45.938 | 320 | 166 | 5 | 35 | 351 | 4 | 319 | 9.57e-100 | 298 |
| MsG0880047066.01.T01 | AT3G05600 | 56.790 | 243 | 100 | 2 | 33 | 270 | 1 | 243 | 1.45e-99 | 294 |
| MsG0880047066.01.T01 | AT4G15955 | 63.793 | 174 | 54 | 2 | 37 | 201 | 6 | 179 | 3.41e-79 | 240 |
| MsG0880047066.01.T01 | AT4G15955 | 63.636 | 165 | 51 | 2 | 37 | 192 | 6 | 170 | 1.10e-73 | 226 |
Find 132 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGAGCCTTGATTCTTTC+AGG | 0.139422 | 8:+81513446 | None:intergenic |
| CTAATGCTCAAGGTTTATTA+AGG | 0.165307 | 8:-81511829 | MsG0880047066.01.T01:three_prime_UTR |
| GATACCCTTAGAGCAGTTTA+TGG | 0.186557 | 8:-81513374 | MsG0880047066.01.T01:CDS |
| CTGAGTGTTTATTATCAAAA+TGG | 0.212621 | 8:-81511952 | MsG0880047066.01.T01:three_prime_UTR |
| CTACCTAAGGGTAAAGGTTT+TGG | 0.220587 | 8:-81512760 | MsG0880047066.01.T01:CDS |
| CTACTATATCTCCAGATTTC+AGG | 0.241721 | 8:-81513345 | MsG0880047066.01.T01:intron |
| TCTTGCGCCAGGTGCATTAT+AGG | 0.271747 | 8:+81512188 | None:intergenic |
| TGTTTGTTGTGGGCCATGAT+TGG | 0.300203 | 8:-81513505 | MsG0880047066.01.T01:CDS |
| TCCAGTCTTGTCAAATTTAG+AGG | 0.310547 | 8:+81512672 | None:intergenic |
| TCTTATCAGCCCTTTCTTGA+TGG | 0.311877 | 8:+81512082 | None:intergenic |
| GAAGAGAGATGTGCCACTTC+TGG | 0.313544 | 8:-81512142 | MsG0880047066.01.T01:CDS |
| CATTACCATAAACTGCTCTA+AGG | 0.315082 | 8:+81513369 | None:intergenic |
| GTTTGTTGTGGGCCATGATT+GGG | 0.324904 | 8:-81513504 | MsG0880047066.01.T01:CDS |
| GAAGCAGAGTTTGCTGAGAT+TGG | 0.336260 | 8:-81512838 | MsG0880047066.01.T01:CDS |
| CTCCGTATCCGCGGAGATCC+GGG | 0.356527 | 8:+81513627 | None:intergenic |
| GGTATCAAGAGGCTTTCTTT+TGG | 0.361993 | 8:+81513391 | None:intergenic |
| TCTCCGTATCCGCGGAGATC+CGG | 0.362597 | 8:+81513626 | None:intergenic |
| CGATGATATCACCAACGATA+TGG | 0.364833 | 8:+81513564 | None:intergenic |
| GGACTTCTTGACGCCATTGC+TGG | 0.376085 | 8:-81513542 | MsG0880047066.01.T01:CDS |
| AATAAAGGATACCTGAAATC+TGG | 0.380959 | 8:+81513334 | None:intergenic |
| CAATATACACATAGCTGAAA+AGG | 0.383217 | 8:-81513753 | MsG0880047066.01.T01:CDS |
| TTTATGAACTCTTCCTGCTC+AGG | 0.398477 | 8:-81511915 | MsG0880047066.01.T01:three_prime_UTR |
| ACATGCTTCAAAACTCTTCA+TGG | 0.405651 | 8:-81511764 | MsG0880047066.01.T01:three_prime_UTR |
| CGCCATGAATACCATAGGTC+AGG | 0.406090 | 8:+81513695 | None:intergenic |
| CAGATCATTCTTAATAATAC+AGG | 0.408908 | 8:+81511740 | None:intergenic |
| GCCTCTAAATTTGACAAGAC+TGG | 0.409879 | 8:-81512673 | MsG0880047066.01.T01:CDS |
| ATGATCTGAATAGTTTCATA+AGG | 0.413105 | 8:-81511725 | MsG0880047066.01.T01:three_prime_UTR |
| TCCCTGACCTATGGTATTCA+TGG | 0.413223 | 8:-81513697 | MsG0880047066.01.T01:CDS |
| TAATGCTCAAGGTTTATTAA+GGG | 0.417353 | 8:-81511828 | MsG0880047066.01.T01:three_prime_UTR |
| AATAGATTCACACACAGAAA+TGG | 0.423230 | 8:-81513819 | MsG0880047066.01.T01:CDS |
| CTCTTGCATTTGTAGAAACT+GGG | 0.434544 | 8:-81512283 | MsG0880047066.01.T01:intron |
| CAAGAGCCTTGATTCTTTCA+GGG | 0.434738 | 8:+81513447 | None:intergenic |
| TTCACACACAGAAATGGAAT+TGG | 0.435576 | 8:-81513813 | MsG0880047066.01.T01:CDS |
| TGGTTACCGTTGTGTGGCCC+CGG | 0.441746 | 8:-81513645 | MsG0880047066.01.T01:CDS |
| GGTAAGTCAGAAATTCCTTC+AGG | 0.449190 | 8:+81512803 | None:intergenic |
| AGTTCCAGTGAAGTTTATAG+TGG | 0.452694 | 8:-81512226 | MsG0880047066.01.T01:CDS |
| TCCATGGCTTCCCTGACCTA+TGG | 0.454284 | 8:-81513706 | MsG0880047066.01.T01:CDS |
| GTGTAGGATGTCGGTGAGGC+TGG | 0.456184 | 8:+81513593 | None:intergenic |
| TGTCCAAAACCTTTACCCTT+AGG | 0.464204 | 8:+81512757 | None:intergenic |
| GGCACTTCATCCATCAAGAA+AGG | 0.470466 | 8:-81512092 | MsG0880047066.01.T01:CDS |
| TTAATCTGTTCCTGCTCAGA+TGG | 0.470484 | 8:-81511996 | MsG0880047066.01.T01:three_prime_UTR |
| TGCCATTGACGGTTACAGTT+CGG | 0.471020 | 8:+81513777 | None:intergenic |
| GGGAAAGATACCAAGCAGTA+AGG | 0.471486 | 8:+81513477 | None:intergenic |
| TGGTCCACTTTATCTACCTA+AGG | 0.475101 | 8:-81512773 | MsG0880047066.01.T01:CDS |
| GCCCCGGATCTCCGCGGATA+CGG | 0.476223 | 8:-81513629 | MsG0880047066.01.T01:CDS |
| CCCCTCATCCTCTTCATCCA+TGG | 0.476628 | 8:-81513722 | MsG0880047066.01.T01:CDS |
| GAGCTCAATGCTCCATGGAC+TGG | 0.480907 | 8:-81512261 | MsG0880047066.01.T01:CDS |
| CATTCTTGTTGTAATAGCCA+TGG | 0.482181 | 8:+81512706 | None:intergenic |
| GAGGATGTGGTAGTAATTGA+AGG | 0.487044 | 8:-81512120 | MsG0880047066.01.T01:CDS |
| CTTTATCTACCTAAGGGTAA+AGG | 0.487285 | 8:-81512766 | MsG0880047066.01.T01:CDS |
| CACCGAACTGTAACCGTCAA+TGG | 0.488598 | 8:-81513779 | MsG0880047066.01.T01:CDS |
| ATTCTTGTTGTAATAGCCAT+GGG | 0.491909 | 8:+81512707 | None:intergenic |
| ATTGGGGTGCCCTTACTGCT+TGG | 0.495004 | 8:-81513487 | MsG0880047066.01.T01:CDS |
| TCACCCACTATAAACTTCAC+TGG | 0.497185 | 8:+81512222 | None:intergenic |
| AACAAAGATGCCATCTGAGC+AGG | 0.503895 | 8:+81511986 | None:intergenic |
| TGATTCTTTCAGGGCGATAG+AGG | 0.506282 | 8:+81513456 | None:intergenic |
| TTATCAAATTCTAATGCTCA+AGG | 0.507356 | 8:-81511839 | MsG0880047066.01.T01:three_prime_UTR |
| CGCCAGGTGCATTATAGGTA+AGG | 0.507980 | 8:+81512193 | None:intergenic |
| ATTGGACATGTATCTTGAAA+CGG | 0.511183 | 8:-81513897 | None:intergenic |
| GTGGTAGTAATTGAAGGGGC+AGG | 0.512487 | 8:-81512114 | MsG0880047066.01.T01:CDS |
| AACACTATAGGAGAATCATT+TGG | 0.512989 | 8:+81512733 | None:intergenic |
| CAGTAAGGGCACCCCAATCA+TGG | 0.516034 | 8:+81513492 | None:intergenic |
| TTTGACAAGACTGGATTCAC+AGG | 0.516984 | 8:-81512664 | MsG0880047066.01.T01:CDS |
| GTGTATATTGATGCCATTGA+CGG | 0.517913 | 8:+81513766 | None:intergenic |
| AATATACACATAGCTGAAAA+GGG | 0.521482 | 8:-81513752 | MsG0880047066.01.T01:CDS |
| AGCCATGGATGAAGAGGATG+AGG | 0.525146 | 8:+81513720 | None:intergenic |
| CAAGAGAAGGTGTTTGTTGT+GGG | 0.533980 | 8:-81513515 | MsG0880047066.01.T01:CDS |
| TTTGTTGTGGGCCATGATTG+GGG | 0.536019 | 8:-81513503 | MsG0880047066.01.T01:CDS |
| GATAAAGTGGACCAGGGTTG+CGG | 0.537081 | 8:+81512782 | None:intergenic |
| ACCATAGGTCAGGGAAGCCA+TGG | 0.537564 | 8:+81513705 | None:intergenic |
| TTGACTTGAGCACCAGTCCA+TGG | 0.539049 | 8:+81512249 | None:intergenic |
| CTATCGCCCTGAAAGAATCA+AGG | 0.541764 | 8:-81513453 | MsG0880047066.01.T01:CDS |
| ACTCTTATCGAAACCTGAGC+AGG | 0.544839 | 8:+81511902 | None:intergenic |
| TTACCCTTAGGTAGATAAAG+TGG | 0.546555 | 8:+81512769 | None:intergenic |
| GGAAAGATACCAAGCAGTAA+GGG | 0.548468 | 8:+81513478 | None:intergenic |
| GAGATTACATTCACAAAGGT+GGG | 0.549684 | 8:-81512167 | MsG0880047066.01.T01:CDS |
| TAATGTACTGTCAATGTACA+TGG | 0.549777 | 8:-81511788 | MsG0880047066.01.T01:three_prime_UTR |
| ACACACAGAAATGGAATTGG+AGG | 0.550717 | 8:-81513810 | MsG0880047066.01.T01:CDS |
| ACTGGGAGCTCAATGCTCCA+TGG | 0.558190 | 8:-81512266 | MsG0880047066.01.T01:CDS |
| GCACTTCATCCATCAAGAAA+GGG | 0.558529 | 8:-81512091 | MsG0880047066.01.T01:CDS |
| TTAGGTAGATAAAGTGGACC+AGG | 0.566129 | 8:+81512775 | None:intergenic |
| ATTACCATAAACTGCTCTAA+GGG | 0.567376 | 8:+81513370 | None:intergenic |
| CAGGGAAGCCATGGATGAAG+AGG | 0.568424 | 8:+81513714 | None:intergenic |
| TCAAGAGAAGGTGTTTGTTG+TGG | 0.568662 | 8:-81513516 | MsG0880047066.01.T01:CDS |
| TGGAACTGAAAGAGTCCTGA+AGG | 0.572316 | 8:-81512818 | MsG0880047066.01.T01:CDS |
| TGAATGTAATCTCTTGCGCC+AGG | 0.576486 | 8:+81512177 | None:intergenic |
| GGCAAGCTAGATATGTGATC+TGG | 0.578371 | 8:+81513669 | None:intergenic |
| AACTCTGCTTCTATATCACC+AGG | 0.579372 | 8:+81512850 | None:intergenic |
| GATTCTTTCAGGGCGATAGA+GGG | 0.583152 | 8:+81513457 | None:intergenic |
| AGAGATTACATTCACAAAGG+TGG | 0.583974 | 8:-81512168 | MsG0880047066.01.T01:CDS |
| GACCTTACCTATAATGCACC+TGG | 0.584480 | 8:-81512195 | MsG0880047066.01.T01:CDS |
| CATATCGTTGGTGATATCAT+CGG | 0.584733 | 8:-81513563 | MsG0880047066.01.T01:CDS |
| TGTGCCACTTCTGGAGGATG+TGG | 0.585353 | 8:-81512133 | MsG0880047066.01.T01:CDS |
| TACACGAGCCTCCATATCGT+TGG | 0.585354 | 8:-81513575 | MsG0880047066.01.T01:CDS |
| ATTGCAATATTACAGGAGCC+TGG | 0.590315 | 8:-81512868 | MsG0880047066.01.T01:intron |
| TTTCTGACTTACCGCAACCC+TGG | 0.591191 | 8:-81512793 | MsG0880047066.01.T01:CDS |
| TGGTAGTAATTGAAGGGGCA+GGG | 0.593222 | 8:-81512113 | MsG0880047066.01.T01:CDS |
| ACTACCACATCCTCCAGAAG+TGG | 0.601204 | 8:+81512129 | None:intergenic |
| TGGAGGCTCGTGTAGGATGT+CGG | 0.601661 | 8:+81513584 | None:intergenic |
| AGGATGTGGTAGTAATTGAA+GGG | 0.602710 | 8:-81512119 | MsG0880047066.01.T01:CDS |
| GGTGGCGCCATGAATACCAT+AGG | 0.602777 | 8:+81513690 | None:intergenic |
| GGGCCACACAACGGTAACCA+TGG | 0.605407 | 8:+81513648 | None:intergenic |
| GCCATGAATACCATAGGTCA+GGG | 0.609127 | 8:+81513696 | None:intergenic |
| CTTCTCTTGATCACCAGCAA+TGG | 0.612834 | 8:+81513529 | None:intergenic |
| GGTCCACTTTATCTACCTAA+GGG | 0.614718 | 8:-81512772 | MsG0880047066.01.T01:CDS |
| TCCGTATCCGCGGAGATCCG+GGG | 0.615698 | 8:+81513628 | None:intergenic |
| ATCACATATCTAGCTTGCCA+TGG | 0.615800 | 8:-81513665 | MsG0880047066.01.T01:CDS |
| CACATAGCTGAAAAGGGTCA+AGG | 0.616966 | 8:-81513746 | MsG0880047066.01.T01:CDS |
| GTTCCAGTGAAGTTTATAGT+GGG | 0.617711 | 8:-81512225 | MsG0880047066.01.T01:CDS |
| TTGCCATGGTTACCGTTGTG+TGG | 0.617946 | 8:-81513651 | MsG0880047066.01.T01:CDS |
| CATTGCTGGTGATCAAGAGA+AGG | 0.621601 | 8:-81513528 | MsG0880047066.01.T01:CDS |
| TGATATCACCAACGATATGG+AGG | 0.639222 | 8:+81513567 | None:intergenic |
| CACACAGAAATGGAATTGGA+GGG | 0.639413 | 8:-81513809 | MsG0880047066.01.T01:CDS |
| TTGACAAGACTGGATTCACA+GGG | 0.645079 | 8:-81512663 | MsG0880047066.01.T01:CDS |
| CCATGGATGAAGAGGATGAG+GGG | 0.647615 | 8:+81513722 | None:intergenic |
| AAGCTAGATATGTGATCTGG+TGG | 0.651401 | 8:+81513672 | None:intergenic |
| GACATGTATCTTGAAACGGA+TGG | 0.656795 | 8:-81513893 | MsG0880047066.01.T01:CDS |
| GGATGTGGTAGTAATTGAAG+GGG | 0.657178 | 8:-81512118 | MsG0880047066.01.T01:CDS |
| AACGATATGGAGGCTCGTGT+AGG | 0.662704 | 8:+81513577 | None:intergenic |
| GAGAGATGTGCCACTTCTGG+AGG | 0.663142 | 8:-81512139 | MsG0880047066.01.T01:CDS |
| GGAGATCCGGGGCCACACAA+CGG | 0.671764 | 8:+81513639 | None:intergenic |
| TTCTTGTTGTAATAGCCATG+GGG | 0.673749 | 8:+81512708 | None:intergenic |
| TATCAGTGTCTCCGTATCCG+CGG | 0.677179 | 8:+81513618 | None:intergenic |
| GCCATGGATGAAGAGGATGA+GGG | 0.678599 | 8:+81513721 | None:intergenic |
| TGTGTGAATCTATTGAGTCG+TGG | 0.680027 | 8:+81513828 | None:intergenic |
| ACTGCTCTAAGGGTATCAAG+AGG | 0.681469 | 8:+81513380 | None:intergenic |
| GCAAGAGATTACATTCACAA+AGG | 0.693415 | 8:-81512171 | MsG0880047066.01.T01:CDS |
| TCTTGTTGTAATAGCCATGG+GGG | 0.696691 | 8:+81512709 | None:intergenic |
| TAGGTAGATAAAGTGGACCA+GGG | 0.714849 | 8:+81512776 | None:intergenic |
| GCTCGTGTAGGATGTCGGTG+AGG | 0.745194 | 8:+81513589 | None:intergenic |
| TGTGTGGCCCCGGATCTCCG+CGG | 0.752770 | 8:-81513635 | MsG0880047066.01.T01:CDS |
| TGACAAGACTGGATTCACAG+GGG | 0.778804 | 8:-81512662 | MsG0880047066.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCAAATTTATCTCAT+TGG | + | Chr8:81513222-81513241 | None:intergenic | 15.0% |
| !!! | CTAAATAGTTTTGAATTTTT+TGG | - | Chr8:81512388-81512407 | MsG0880047066.01.T01:intron | 15.0% |
| !!! | TTTTTTTACAGTAAAATCTA+TGG | - | Chr8:81513072-81513091 | MsG0880047066.01.T01:intron | 15.0% |
| !! | ACAAACCTTAATAAATCTAA+GGG | + | Chr8:81512322-81512341 | None:intergenic | 20.0% |
| !! | ATTTGATCAAGTAAATACTA+AGG | + | Chr8:81512367-81512386 | None:intergenic | 20.0% |
| !! | TAATGAGTTAGTAAGAAATA+TGG | - | Chr8:81513170-81513189 | MsG0880047066.01.T01:intron | 20.0% |
| !! | TACAAACCTTAATAAATCTA+AGG | + | Chr8:81512323-81512342 | None:intergenic | 20.0% |
| !! | TTTGATCAAGTAAATACTAA+GGG | + | Chr8:81512366-81512385 | None:intergenic | 20.0% |
| !!! | TAATTTTTAATTGAGCAAAC+CGG | - | Chr8:81512546-81512565 | MsG0880047066.01.T01:intron | 20.0% |
| !!! | TCAAAAAATTCTAATTTGCT+CGG | - | Chr8:81513572-81513591 | MsG0880047066.01.T01:CDS | 20.0% |
| !!! | TTTACTTTGAAAATCATGAT+CGG | - | Chr8:81512605-81512624 | MsG0880047066.01.T01:intron | 20.0% |
| ! | AATATACACATAGCTGAAAA+GGG | - | Chr8:81511855-81511874 | MsG0880047066.01.T01:three_prime_UTR | 25.0% |
| ! | ATGATCTGAATAGTTTCATA+AGG | - | Chr8:81513882-81513901 | MsG0880047066.01.T01:CDS | 25.0% |
| ! | CAGATCATTCTTAATAATAC+AGG | + | Chr8:81513870-81513889 | None:intergenic | 25.0% |
| ! | CTGAGTGTTTATTATCAAAA+TGG | - | Chr8:81513655-81513674 | MsG0880047066.01.T01:CDS | 25.0% |
| ! | TAATGCTCAAGGTTTATTAA+GGG | - | Chr8:81513779-81513798 | MsG0880047066.01.T01:CDS | 25.0% |
| ! | TTATCAAATTCTAATGCTCA+AGG | - | Chr8:81513768-81513787 | MsG0880047066.01.T01:CDS | 25.0% |
| ! | TTTACAGTAAAATCTATGGA+GGG | - | Chr8:81513076-81513095 | MsG0880047066.01.T01:intron | 25.0% |
| !! | CAAAGATATATTGTTCTAAG+TGG | - | Chr8:81512704-81512723 | MsG0880047066.01.T01:CDS | 25.0% |
| !! | TTTTACAGTAAAATCTATGG+AGG | - | Chr8:81513075-81513094 | MsG0880047066.01.T01:intron | 25.0% |
| !!! | AAAAAATTCTAATTTGCTCG+GGG | - | Chr8:81513574-81513593 | MsG0880047066.01.T01:CDS | 25.0% |
| !!! | CAAAAAATTCTAATTTGCTC+GGG | - | Chr8:81513573-81513592 | MsG0880047066.01.T01:CDS | 25.0% |
| !!! | TTTTTTCAGATGTCTACTTT+CGG | + | Chr8:81512520-81512539 | None:intergenic | 25.0% |
| AACACTATAGGAGAATCATT+TGG | + | Chr8:81512877-81512896 | None:intergenic | 30.0% | |
| AAGCTCCCTTAGATTTATTA+AGG | - | Chr8:81512314-81512333 | MsG0880047066.01.T01:intron | 30.0% | |
| AATAAAGGATACCTGAAATC+TGG | + | Chr8:81512276-81512295 | None:intergenic | 30.0% | |
| AATAGATTCACACACAGAAA+TGG | - | Chr8:81511788-81511807 | MsG0880047066.01.T01:three_prime_UTR | 30.0% | |
| ATTACCATAAACTGCTCTAA+GGG | + | Chr8:81512240-81512259 | None:intergenic | 30.0% | |
| CAATATACACATAGCTGAAA+AGG | - | Chr8:81511854-81511873 | MsG0880047066.01.T01:three_prime_UTR | 30.0% | |
| CTAATGCTCAAGGTTTATTA+AGG | - | Chr8:81513778-81513797 | MsG0880047066.01.T01:CDS | 30.0% | |
| GTAAGTTTATCTTCAACTCT+AGG | - | Chr8:81512996-81513015 | MsG0880047066.01.T01:intron | 30.0% | |
| TAATGTACTGTCAATGTACA+TGG | - | Chr8:81513819-81513838 | MsG0880047066.01.T01:CDS | 30.0% | |
| TCTGTCAATTGCAATATTAC+AGG | - | Chr8:81512732-81512751 | MsG0880047066.01.T01:CDS | 30.0% | |
| TGTCTCTATCAATGTTTCAT+AGG | - | Chr8:81513262-81513281 | MsG0880047066.01.T01:intron | 30.0% | |
| ! | ATTCTTGTTGTAATAGCCAT+GGG | + | Chr8:81512903-81512922 | None:intergenic | 30.0% |
| ACATGCTTCAAAACTCTTCA+TGG | - | Chr8:81513843-81513862 | MsG0880047066.01.T01:CDS | 35.0% | |
| AGAGATTACATTCACAAAGG+TGG | - | Chr8:81513439-81513458 | MsG0880047066.01.T01:CDS | 35.0% | |
| AGGATGTGGTAGTAATTGAA+GGG | - | Chr8:81513488-81513507 | MsG0880047066.01.T01:CDS | 35.0% | |
| AGTTCCAGTGAAGTTTATAG+TGG | - | Chr8:81513381-81513400 | MsG0880047066.01.T01:CDS | 35.0% | |
| ATCTAAGGGAGCTTATCTAT+AGG | + | Chr8:81512308-81512327 | None:intergenic | 35.0% | |
| CAAATGCAAGAGAAGCAATA+TGG | + | Chr8:81513316-81513335 | None:intergenic | 35.0% | |
| CATTACCATAAACTGCTCTA+AGG | + | Chr8:81512241-81512260 | None:intergenic | 35.0% | |
| CTACTATATCTCCAGATTTC+AGG | - | Chr8:81512262-81512281 | MsG0880047066.01.T01:CDS | 35.0% | |
| CTCTTGCATTTGTAGAAACT+GGG | - | Chr8:81513324-81513343 | MsG0880047066.01.T01:intron | 35.0% | |
| CTTTATCTACCTAAGGGTAA+AGG | - | Chr8:81512841-81512860 | MsG0880047066.01.T01:CDS | 35.0% | |
| GAGATTACATTCACAAAGGT+GGG | - | Chr8:81513440-81513459 | MsG0880047066.01.T01:CDS | 35.0% | |
| GCAAGAGATTACATTCACAA+AGG | - | Chr8:81513436-81513455 | MsG0880047066.01.T01:CDS | 35.0% | |
| GTGTATATTGATGCCATTGA+CGG | + | Chr8:81511844-81511863 | None:intergenic | 35.0% | |
| GTTCCAGTGAAGTTTATAGT+GGG | - | Chr8:81513382-81513401 | MsG0880047066.01.T01:CDS | 35.0% | |
| TCTAAGGGAGCTTATCTATA+GGG | + | Chr8:81512307-81512326 | None:intergenic | 35.0% | |
| TCTCTTGCATTTGTAGAAAC+TGG | - | Chr8:81513323-81513342 | MsG0880047066.01.T01:intron | 35.0% | |
| TTACCCTTAGGTAGATAAAG+TGG | + | Chr8:81512841-81512860 | None:intergenic | 35.0% | |
| TTCACACACAGAAATGGAAT+TGG | - | Chr8:81511794-81511813 | MsG0880047066.01.T01:three_prime_UTR | 35.0% | |
| ! | CATTCTTGTTGTAATAGCCA+TGG | + | Chr8:81512904-81512923 | None:intergenic | 35.0% |
| ! | GTATCAAGAGGCTTTCTTTT+GGG | + | Chr8:81512218-81512237 | None:intergenic | 35.0% |
| ! | TATCAAGAGGCTTTCTTTTG+GGG | + | Chr8:81512217-81512236 | None:intergenic | 35.0% |
| ! | TCCAGTCTTGTCAAATTTAG+AGG | + | Chr8:81512938-81512957 | None:intergenic | 35.0% |
| ! | TGATCGGAATTTTCGAAATG+TGG | - | Chr8:81512621-81512640 | MsG0880047066.01.T01:intron | 35.0% |
| ! | TTCTTGTTGTAATAGCCATG+GGG | + | Chr8:81512902-81512921 | None:intergenic | 35.0% |
| !! | CATATCGTTGGTGATATCAT+CGG | - | Chr8:81512044-81512063 | MsG0880047066.01.T01:CDS | 35.0% |
| !!! | GTGGATTGGTGTAGTTATTT+TGG | - | Chr8:81512677-81512696 | MsG0880047066.01.T01:CDS | 35.0% |
| AACTCTGCTTCTATATCACC+AGG | + | Chr8:81512760-81512779 | None:intergenic | 40.0% | |
| AAGCTAGATATGTGATCTGG+TGG | + | Chr8:81511938-81511957 | None:intergenic | 40.0% | |
| ACAAGAGCCTTGATTCTTTC+AGG | + | Chr8:81512164-81512183 | None:intergenic | 40.0% | |
| ACACACAGAAATGGAATTGG+AGG | - | Chr8:81511797-81511816 | MsG0880047066.01.T01:three_prime_UTR | 40.0% | |
| AGCTTATCTATAGGGACTGA+GGG | + | Chr8:81512299-81512318 | None:intergenic | 40.0% | |
| ATTGCAATATTACAGGAGCC+TGG | - | Chr8:81512739-81512758 | MsG0880047066.01.T01:CDS | 40.0% | |
| CAAGAGCCTTGATTCTTTCA+GGG | + | Chr8:81512163-81512182 | None:intergenic | 40.0% | |
| CAATCCACAAAAACTCAGCA+TGG | + | Chr8:81512665-81512684 | None:intergenic | 40.0% | |
| CACACAGAAATGGAATTGGA+GGG | - | Chr8:81511798-81511817 | MsG0880047066.01.T01:three_prime_UTR | 40.0% | |
| CATGTTTGATCAGTAAGTGC+CGG | + | Chr8:81512568-81512587 | None:intergenic | 40.0% | |
| CGATGATATCACCAACGATA+TGG | + | Chr8:81512046-81512065 | None:intergenic | 40.0% | |
| GAGGATGTGGTAGTAATTGA+AGG | - | Chr8:81513487-81513506 | MsG0880047066.01.T01:CDS | 40.0% | |
| GATACCCTTAGAGCAGTTTA+TGG | - | Chr8:81512233-81512252 | MsG0880047066.01.T01:CDS | 40.0% | |
| GCACTTCATCCATCAAGAAA+GGG | - | Chr8:81513516-81513535 | MsG0880047066.01.T01:CDS | 40.0% | |
| GCCTCTAAATTTGACAAGAC+TGG | - | Chr8:81512934-81512953 | MsG0880047066.01.T01:intron | 40.0% | |
| GGAAAGATACCAAGCAGTAA+GGG | + | Chr8:81512132-81512151 | None:intergenic | 40.0% | |
| GGATGTGGTAGTAATTGAAG+GGG | - | Chr8:81513489-81513508 | MsG0880047066.01.T01:CDS | 40.0% | |
| GGTAAGTCAGAAATTCCTTC+AGG | + | Chr8:81512807-81512826 | None:intergenic | 40.0% | |
| GGTCCACTTTATCTACCTAA+GGG | - | Chr8:81512835-81512854 | MsG0880047066.01.T01:CDS | 40.0% | |
| TAGGTAGATAAAGTGGACCA+GGG | + | Chr8:81512834-81512853 | None:intergenic | 40.0% | |
| TATAGGGACTGAGGGAATAA+AGG | + | Chr8:81512291-81512310 | None:intergenic | 40.0% | |
| TCACCCACTATAAACTTCAC+TGG | + | Chr8:81513388-81513407 | None:intergenic | 40.0% | |
| TCTTATCAGCCCTTTCTTGA+TGG | + | Chr8:81513528-81513547 | None:intergenic | 40.0% | |
| TGATATCACCAACGATATGG+AGG | + | Chr8:81512043-81512062 | None:intergenic | 40.0% | |
| TGGTCCACTTTATCTACCTA+AGG | - | Chr8:81512834-81512853 | MsG0880047066.01.T01:CDS | 40.0% | |
| TGTCCAAAACCTTTACCCTT+AGG | + | Chr8:81512853-81512872 | None:intergenic | 40.0% | |
| TGTGTGAATCTATTGAGTCG+TGG | + | Chr8:81511782-81511801 | None:intergenic | 40.0% | |
| TTAATCTGTTCCTGCTCAGA+TGG | - | Chr8:81513611-81513630 | MsG0880047066.01.T01:CDS | 40.0% | |
| TTAGGTAGATAAAGTGGACC+AGG | + | Chr8:81512835-81512854 | None:intergenic | 40.0% | |
| TTGACAAGACTGGATTCACA+GGG | - | Chr8:81512944-81512963 | MsG0880047066.01.T01:intron | 40.0% | |
| TTTATGAACTCTTCCTGCTC+AGG | - | Chr8:81513692-81513711 | MsG0880047066.01.T01:CDS | 40.0% | |
| TTTGACAAGACTGGATTCAC+AGG | - | Chr8:81512943-81512962 | MsG0880047066.01.T01:intron | 40.0% | |
| ! | ATCACATATCTAGCTTGCCA+TGG | - | Chr8:81511942-81511961 | MsG0880047066.01.T01:three_prime_UTR | 40.0% |
| ! | CAATCCATGCTGAGTTTTTG+TGG | - | Chr8:81512658-81512677 | MsG0880047066.01.T01:CDS | 40.0% |
| ! | CATGCTGAGTTTTTGTGGAT+TGG | - | Chr8:81512663-81512682 | MsG0880047066.01.T01:CDS | 40.0% |
| ! | CTACCTAAGGGTAAAGGTTT+TGG | - | Chr8:81512847-81512866 | MsG0880047066.01.T01:CDS | 40.0% |
| ! | GGAATTTTCGAAATGTGGAG+TGG | - | Chr8:81512626-81512645 | MsG0880047066.01.T01:intron | 40.0% |
| ! | GGTATCAAGAGGCTTTCTTT+TGG | + | Chr8:81512219-81512238 | None:intergenic | 40.0% |
| ! | TCTTGTTGTAATAGCCATGG+GGG | + | Chr8:81512901-81512920 | None:intergenic | 40.0% |
| !! | CAAGAGAAGGTGTTTGTTGT+GGG | - | Chr8:81512092-81512111 | MsG0880047066.01.T01:CDS | 40.0% |
| !! | TCAAGAGAAGGTGTTTGTTG+TGG | - | Chr8:81512091-81512110 | MsG0880047066.01.T01:CDS | 40.0% |
| AACAAAGATGCCATCTGAGC+AGG | + | Chr8:81513624-81513643 | None:intergenic | 45.0% | |
| ACTCTTATCGAAACCTGAGC+AGG | + | Chr8:81513708-81513727 | None:intergenic | 45.0% | |
| CACATAGCTGAAAAGGGTCA+AGG | - | Chr8:81511861-81511880 | MsG0880047066.01.T01:three_prime_UTR | 45.0% | |
| CATTGCTGGTGATCAAGAGA+AGG | - | Chr8:81512079-81512098 | MsG0880047066.01.T01:CDS | 45.0% | |
| CGGCACTTACTGATCAAACA+TGG | - | Chr8:81512566-81512585 | MsG0880047066.01.T01:intron | 45.0% | |
| CTATCGCCCTGAAAGAATCA+AGG | - | Chr8:81512154-81512173 | MsG0880047066.01.T01:CDS | 45.0% | |
| CTTCTCTTGATCACCAGCAA+TGG | + | Chr8:81512081-81512100 | None:intergenic | 45.0% | |
| GACCTTACCTATAATGCACC+TGG | - | Chr8:81513412-81513431 | MsG0880047066.01.T01:CDS | 45.0% | |
| GAGCTTATCTATAGGGACTG+AGG | + | Chr8:81512300-81512319 | None:intergenic | 45.0% | |
| GATTCTTTCAGGGCGATAGA+GGG | + | Chr8:81512153-81512172 | None:intergenic | 45.0% | |
| GCCATGAATACCATAGGTCA+GGG | + | Chr8:81511914-81511933 | None:intergenic | 45.0% | |
| GGCAAGCTAGATATGTGATC+TGG | + | Chr8:81511941-81511960 | None:intergenic | 45.0% | |
| GGCACTTCATCCATCAAGAA+AGG | - | Chr8:81513515-81513534 | MsG0880047066.01.T01:CDS | 45.0% | |
| GGGAAAGATACCAAGCAGTA+AGG | + | Chr8:81512133-81512152 | None:intergenic | 45.0% | |
| TCCCTGACCTATGGTATTCA+TGG | - | Chr8:81511910-81511929 | MsG0880047066.01.T01:three_prime_UTR | 45.0% | |
| TGAATGTAATCTCTTGCGCC+AGG | + | Chr8:81513433-81513452 | None:intergenic | 45.0% | |
| TGACAAGACTGGATTCACAG+GGG | - | Chr8:81512945-81512964 | MsG0880047066.01.T01:intron | 45.0% | |
| TGATTCTTTCAGGGCGATAG+AGG | + | Chr8:81512154-81512173 | None:intergenic | 45.0% | |
| TGCCATTGACGGTTACAGTT+CGG | + | Chr8:81511833-81511852 | None:intergenic | 45.0% | |
| TGGAACTGAAAGAGTCCTGA+AGG | - | Chr8:81512789-81512808 | MsG0880047066.01.T01:CDS | 45.0% | |
| TGGTAGTAATTGAAGGGGCA+GGG | - | Chr8:81513494-81513513 | MsG0880047066.01.T01:CDS | 45.0% | |
| ! | TTTGTTGTGGGCCATGATTG+GGG | - | Chr8:81512104-81512123 | MsG0880047066.01.T01:CDS | 45.0% |
| !! | ACTGCTCTAAGGGTATCAAG+AGG | + | Chr8:81512230-81512249 | None:intergenic | 45.0% |
| !! | GAAGCAGAGTTTGCTGAGAT+TGG | - | Chr8:81512769-81512788 | MsG0880047066.01.T01:CDS | 45.0% |
| !! | GTTTGTTGTGGGCCATGATT+GGG | - | Chr8:81512103-81512122 | MsG0880047066.01.T01:CDS | 45.0% |
| !! | TGTTTGTTGTGGGCCATGAT+TGG | - | Chr8:81512102-81512121 | MsG0880047066.01.T01:CDS | 45.0% |
| !!! | GGCTTTCTTTTGGGGTTTCT+AGG | + | Chr8:81512209-81512228 | None:intergenic | 45.0% |
| AACGATATGGAGGCTCGTGT+AGG | + | Chr8:81512033-81512052 | None:intergenic | 50.0% | |
| ACTACCACATCCTCCAGAAG+TGG | + | Chr8:81513481-81513500 | None:intergenic | 50.0% | |
| AGCCATGGATGAAGAGGATG+AGG | + | Chr8:81511890-81511909 | None:intergenic | 50.0% | |
| CACCGAACTGTAACCGTCAA+TGG | - | Chr8:81511828-81511847 | MsG0880047066.01.T01:three_prime_UTR | 50.0% | |
| CCATGGATGAAGAGGATGAG+GGG | + | Chr8:81511888-81511907 | None:intergenic | 50.0% | |
| CGCCAGGTGCATTATAGGTA+AGG | + | Chr8:81513417-81513436 | None:intergenic | 50.0% | |
| CGCCATGAATACCATAGGTC+AGG | + | Chr8:81511915-81511934 | None:intergenic | 50.0% | |
| GATAAAGTGGACCAGGGTTG+CGG | + | Chr8:81512828-81512847 | None:intergenic | 50.0% | |
| GCCATGGATGAAGAGGATGA+GGG | + | Chr8:81511889-81511908 | None:intergenic | 50.0% | |
| GTGGTAGTAATTGAAGGGGC+AGG | - | Chr8:81513493-81513512 | MsG0880047066.01.T01:CDS | 50.0% | |
| TACACGAGCCTCCATATCGT+TGG | - | Chr8:81512032-81512051 | MsG0880047066.01.T01:exon | 50.0% | |
| TATCAGTGTCTCCGTATCCG+CGG | + | Chr8:81511992-81512011 | None:intergenic | 50.0% | |
| TCTTGCGCCAGGTGCATTAT+AGG | + | Chr8:81513422-81513441 | None:intergenic | 50.0% | |
| TTGCCATGGTTACCGTTGTG+TGG | - | Chr8:81511956-81511975 | MsG0880047066.01.T01:three_prime_UTR | 50.0% | |
| TTTCTGACTTACCGCAACCC+TGG | - | Chr8:81512814-81512833 | MsG0880047066.01.T01:CDS | 50.0% | |
| ! | TTGACTTGAGCACCAGTCCA+TGG | + | Chr8:81513361-81513380 | None:intergenic | 50.0% |
| !! | GAAGAGAGATGTGCCACTTC+TGG | - | Chr8:81513465-81513484 | MsG0880047066.01.T01:CDS | 50.0% |
| ACCATAGGTCAGGGAAGCCA+TGG | + | Chr8:81511905-81511924 | None:intergenic | 55.0% | |
| ACTGGGAGCTCAATGCTCCA+TGG | - | Chr8:81513341-81513360 | MsG0880047066.01.T01:intron | 55.0% | |
| AGCCATGGGGGCAACACTAT+AGG | + | Chr8:81512889-81512908 | None:intergenic | 55.0% | |
| CAGGGAAGCCATGGATGAAG+AGG | + | Chr8:81511896-81511915 | None:intergenic | 55.0% | |
| CCCCTCATCCTCTTCATCCA+TGG | - | Chr8:81511885-81511904 | MsG0880047066.01.T01:three_prime_UTR | 55.0% | |
| CTCCTATAGTGTTGCCCCCA+TGG | - | Chr8:81512884-81512903 | MsG0880047066.01.T01:intron | 55.0% | |
| GAGCTCAATGCTCCATGGAC+TGG | - | Chr8:81513346-81513365 | MsG0880047066.01.T01:CDS | 55.0% | |
| GGACTTCTTGACGCCATTGC+TGG | - | Chr8:81512065-81512084 | MsG0880047066.01.T01:CDS | 55.0% | |
| GGTGGCGCCATGAATACCAT+AGG | + | Chr8:81511920-81511939 | None:intergenic | 55.0% | |
| TCCATGGCTTCCCTGACCTA+TGG | - | Chr8:81511901-81511920 | MsG0880047066.01.T01:three_prime_UTR | 55.0% | |
| TGGAGGCTCGTGTAGGATGT+CGG | + | Chr8:81512026-81512045 | None:intergenic | 55.0% | |
| ! | ATTGGGGTGCCCTTACTGCT+TGG | - | Chr8:81512120-81512139 | MsG0880047066.01.T01:CDS | 55.0% |
| !! | CAGTAAGGGCACCCCAATCA+TGG | + | Chr8:81512118-81512137 | None:intergenic | 55.0% |
| !! | GAGAGATGTGCCACTTCTGG+AGG | - | Chr8:81513468-81513487 | MsG0880047066.01.T01:CDS | 55.0% |
| !! | TGTGCCACTTCTGGAGGATG+TGG | - | Chr8:81513474-81513493 | MsG0880047066.01.T01:CDS | 55.0% |
| GCTCGTGTAGGATGTCGGTG+AGG | + | Chr8:81512021-81512040 | None:intergenic | 60.0% | |
| GGGCCACACAACGGTAACCA+TGG | + | Chr8:81511962-81511981 | None:intergenic | 60.0% | |
| GTGTAGGATGTCGGTGAGGC+TGG | + | Chr8:81512017-81512036 | None:intergenic | 60.0% | |
| TCTCCGTATCCGCGGAGATC+CGG | + | Chr8:81511984-81512003 | None:intergenic | 60.0% | |
| TGGTTACCGTTGTGTGGCCC+CGG | - | Chr8:81511962-81511981 | MsG0880047066.01.T01:three_prime_UTR | 60.0% | |
| CTCCGTATCCGCGGAGATCC+GGG | + | Chr8:81511983-81512002 | None:intergenic | 65.0% | |
| GGAGATCCGGGGCCACACAA+CGG | + | Chr8:81511971-81511990 | None:intergenic | 65.0% | |
| TCCGTATCCGCGGAGATCCG+GGG | + | Chr8:81511982-81512001 | None:intergenic | 65.0% | |
| GCCCCGGATCTCCGCGGATA+CGG | - | Chr8:81511978-81511997 | MsG0880047066.01.T01:three_prime_UTR | 70.0% | |
| TGTGTGGCCCCGGATCTCCG+CGG | - | Chr8:81511972-81511991 | MsG0880047066.01.T01:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 81511717 | 81513912 | 81511717 | ID=MsG0880047066.01;Name=MsG0880047066.01 |
| Chr8 | mRNA | 81511717 | 81513912 | 81511717 | ID=MsG0880047066.01.T01;Parent=MsG0880047066.01;Name=MsG0880047066.01.T01;_AED=0.21;_eAED=0.21;_QI=0|1|0.66|1|1|1|3|327|351 |
| Chr8 | exon | 81511717 | 81512290 | 81511717 | ID=MsG0880047066.01.T01:exon:34913;Parent=MsG0880047066.01.T01 |
| Chr8 | exon | 81512634 | 81512875 | 81512634 | ID=MsG0880047066.01.T01:exon:34912;Parent=MsG0880047066.01.T01 |
| Chr8 | exon | 81513346 | 81513912 | 81513346 | ID=MsG0880047066.01.T01:exon:34911;Parent=MsG0880047066.01.T01 |
| Chr8 | CDS | 81513346 | 81513912 | 81513346 | ID=MsG0880047066.01.T01:cds;Parent=MsG0880047066.01.T01 |
| Chr8 | CDS | 81512634 | 81512875 | 81512634 | ID=MsG0880047066.01.T01:cds;Parent=MsG0880047066.01.T01 |
| Chr8 | CDS | 81512044 | 81512290 | 81512044 | ID=MsG0880047066.01.T01:cds;Parent=MsG0880047066.01.T01 |
| Chr8 | three_prime_UTR | 81511717 | 81512043 | 81511717 | ID=MsG0880047066.01.T01:three_prime_utr;Parent=MsG0880047066.01.T01 |
| Gene Sequence |
| Protein sequence |
