Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041689.01.T01 | XP_004516473.1 | 92.15 | 293 | 23 | 0 | 3 | 295 | 121 | 413 | 0 | 551 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041689.01.T01 | Q8VXY7 | 68.475 | 295 | 91 | 1 | 3 | 295 | 156 | 450 | 1.52E-145 | 419 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041689.01.T01 | A0A1S2Z7N2 | 92.150 | 293 | 23 | 0 | 3 | 295 | 121 | 413 | 0.0 | 551 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0280007783.01 | MsG0780041689.01 | -0.802230 | 6.190765e-49 | 3.016512e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041689.01.T01 | MTR_0003s0470 | 91.126 | 293 | 26 | 0 | 3 | 295 | 123 | 415 | 0.0 | 547 |
| MsG0780041689.01.T01 | MTR_3g462280 | 88.356 | 292 | 34 | 0 | 4 | 295 | 132 | 423 | 0.0 | 511 |
| MsG0780041689.01.T01 | MTR_4g114710 | 50.704 | 284 | 130 | 1 | 12 | 295 | 125 | 398 | 2.18e-86 | 264 |
| MsG0780041689.01.T01 | MTR_0008s0130 | 34.797 | 296 | 170 | 7 | 18 | 295 | 120 | 410 | 2.32e-45 | 158 |
| MsG0780041689.01.T01 | MTR_0008s0170 | 32.686 | 309 | 184 | 6 | 4 | 295 | 109 | 410 | 3.99e-44 | 155 |
| MsG0780041689.01.T01 | MTR_2g011600 | 33.110 | 299 | 167 | 7 | 21 | 295 | 79 | 368 | 6.65e-42 | 148 |
| MsG0780041689.01.T01 | MTR_2g011580 | 33.333 | 294 | 172 | 5 | 21 | 295 | 90 | 378 | 6.68e-42 | 149 |
| MsG0780041689.01.T01 | MTR_2g011600 | 33.110 | 299 | 167 | 7 | 21 | 295 | 130 | 419 | 2.16e-41 | 148 |
| MsG0780041689.01.T01 | MTR_2g047968 | 34.783 | 299 | 166 | 7 | 18 | 295 | 120 | 410 | 3.48e-41 | 148 |
| MsG0780041689.01.T01 | MTR_4g050990 | 33.893 | 298 | 170 | 6 | 18 | 295 | 120 | 410 | 2.47e-36 | 134 |
| MsG0780041689.01.T01 | MTR_2g089520 | 33.893 | 298 | 170 | 6 | 18 | 295 | 120 | 410 | 2.47e-36 | 134 |
| MsG0780041689.01.T01 | MTR_1g071120 | 33.182 | 220 | 124 | 5 | 18 | 221 | 163 | 375 | 2.50e-30 | 118 |
| MsG0780041689.01.T01 | MTR_8g007285 | 29.932 | 294 | 183 | 6 | 21 | 295 | 73 | 362 | 1.42e-27 | 110 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041689.01.T01 | AT1G70330 | 68.475 | 295 | 91 | 1 | 3 | 295 | 156 | 450 | 1.55e-146 | 419 |
| MsG0780041689.01.T01 | AT1G02630 | 50.174 | 287 | 130 | 3 | 9 | 295 | 116 | 389 | 1.60e-91 | 277 |
| MsG0780041689.01.T01 | AT1G02630 | 40.767 | 287 | 113 | 4 | 9 | 295 | 116 | 345 | 7.23e-61 | 197 |
| MsG0780041689.01.T01 | AT4G05120 | 31.987 | 297 | 170 | 6 | 21 | 295 | 126 | 412 | 3.16e-37 | 137 |
| MsG0780041689.01.T01 | AT4G05120 | 31.987 | 297 | 170 | 6 | 21 | 295 | 126 | 412 | 3.16e-37 | 137 |
| MsG0780041689.01.T01 | AT1G61630 | 31.561 | 301 | 176 | 6 | 17 | 295 | 120 | 412 | 3.41e-37 | 137 |
| MsG0780041689.01.T01 | AT4G05110 | 30.640 | 297 | 174 | 7 | 21 | 295 | 126 | 412 | 4.23e-34 | 129 |
| MsG0780041689.01.T01 | AT4G05110 | 30.640 | 297 | 174 | 7 | 21 | 295 | 126 | 412 | 4.23e-34 | 129 |
| MsG0780041689.01.T01 | AT4G05110 | 30.640 | 297 | 174 | 7 | 21 | 295 | 126 | 412 | 8.51e-34 | 128 |
| MsG0780041689.01.T01 | AT3G09990 | 29.932 | 294 | 182 | 5 | 21 | 295 | 125 | 413 | 4.01e-33 | 126 |
| MsG0780041689.01.T01 | AT4G05130 | 29.392 | 296 | 179 | 7 | 21 | 295 | 126 | 412 | 9.80e-33 | 125 |
| MsG0780041689.01.T01 | AT4G05140 | 30.537 | 298 | 182 | 7 | 17 | 295 | 122 | 413 | 2.39e-32 | 124 |
Find 76 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGGGGCTGTTGGGATTTC+AGG | 0.094893 | 7:+93966290 | MsG0780041689.01.T01:CDS |
| GCTCTATTATAGCTTGGTTT+TGG | 0.174004 | 7:+93967351 | MsG0780041689.01.T01:CDS |
| ACACTATTAACGTGTCTCTT+AGG | 0.195857 | 7:+93967206 | MsG0780041689.01.T01:CDS |
| TACACGCAGGCGGTCATTGC+TGG | 0.225351 | 7:+93966374 | MsG0780041689.01.T01:CDS |
| AGTGTGTTCTTCTTAGTTAT+TGG | 0.230173 | 7:+93967317 | MsG0780041689.01.T01:CDS |
| TTCATTATAGTACTTTATAA+TGG | 0.242520 | 7:-93966805 | None:intergenic |
| TTGGTGCAGGGATCTATTCT+TGG | 0.258857 | 7:+93966326 | MsG0780041689.01.T01:CDS |
| TGGCTCCGCCGGTGAGTTGC+CGG | 0.310687 | 7:+93966346 | MsG0780041689.01.T01:CDS |
| ACACATTAAAGCAAGTAATA+AGG | 0.345288 | 7:-93967034 | None:intergenic |
| ATCTCTGTCCGGAAGAATTT+CGG | 0.346613 | 7:-93967176 | None:intergenic |
| TTAGTTATTGGTCTGGCTGC+TGG | 0.347855 | 7:+93967329 | MsG0780041689.01.T01:CDS |
| AAGCAAGTAATAAGGAGAAT+TGG | 0.349646 | 7:-93967026 | None:intergenic |
| ACGTCACTGCTGGGGCTGTT+GGG | 0.361788 | 7:+93966282 | MsG0780041689.01.T01:CDS |
| TACGTCACTGCTGGGGCTGT+TGG | 0.363518 | 7:+93966281 | MsG0780041689.01.T01:CDS |
| CTTGATGTCGTGTATGTTAA+GGG | 0.366056 | 7:+93966238 | None:intergenic |
| TTTAATGTGTTTGACCTTGT+TGG | 0.367568 | 7:+93967047 | MsG0780041689.01.T01:CDS |
| CTCTGCATGCTGCAACTTCA+CGG | 0.371199 | 7:-93967279 | None:intergenic |
| CTATAATGAACTTAAGATTC+AGG | 0.375812 | 7:+93966818 | MsG0780041689.01.T01:CDS |
| TTCAGGTGTGGCTAATGCTT+TGG | 0.388115 | 7:+93966307 | MsG0780041689.01.T01:CDS |
| TCATTATAGTACTTTATAAT+GGG | 0.388994 | 7:-93966804 | None:intergenic |
| ACTCTCAGCTTCTTAAAGAT+TGG | 0.396591 | 7:+93967000 | MsG0780041689.01.T01:CDS |
| ACACGCAGGCGGTCATTGCT+GGG | 0.398252 | 7:+93966375 | MsG0780041689.01.T01:CDS |
| TGCACGGTCCGAAATTCTTC+CGG | 0.401715 | 7:+93967168 | MsG0780041689.01.T01:CDS |
| CTGCTGGCTCTATTATAGCT+TGG | 0.403267 | 7:+93967345 | MsG0780041689.01.T01:CDS |
| GTGACGCTTGCAATATTTCC+TGG | 0.410311 | 7:+93966957 | MsG0780041689.01.T01:CDS |
| GGGTGCTTGTTTCTTTCCTA+AGG | 0.415931 | 7:+93966655 | MsG0780041689.01.T01:CDS |
| TAAGGGTCGGGTTGTATAAC+GGG | 0.426595 | 7:+93966255 | MsG0780041689.01.T01:CDS |
| CACTATTAACGTGTCTCTTA+GGG | 0.428475 | 7:+93967207 | MsG0780041689.01.T01:CDS |
| GTTCTTCTTAGTTATTGGTC+TGG | 0.429994 | 7:+93967322 | MsG0780041689.01.T01:CDS |
| CTGTCTGGAGATCAACTGTA+TGG | 0.434174 | 7:+93966880 | MsG0780041689.01.T01:CDS |
| GCTTGATGTCGTGTATGTTA+AGG | 0.447841 | 7:+93966237 | None:intergenic |
| GTCCTTTGACAGTATCTGTC+TGG | 0.460668 | 7:+93966865 | MsG0780041689.01.T01:CDS |
| TTGGGAACAATCAAGTGGTA+TGG | 0.465805 | 7:+93966909 | MsG0780041689.01.T01:CDS |
| ATCAACTGTATGGGATACCT+TGG | 0.475679 | 7:+93966890 | MsG0780041689.01.T01:CDS |
| TTAAGGGTCGGGTTGTATAA+CGG | 0.478849 | 7:+93966254 | MsG0780041689.01.T01:CDS |
| ATGTCGTGTATGTTAAGGGT+CGG | 0.483565 | 7:+93966242 | None:intergenic |
| TGTGGCTAATGCTTTGGTGC+AGG | 0.485275 | 7:+93966313 | MsG0780041689.01.T01:CDS |
| CACGCAGGCGGTCATTGCTG+GGG | 0.489338 | 7:+93966376 | MsG0780041689.01.T01:CDS |
| ACCATTGTCGTCTTCAACGG+CGG | 0.502286 | 7:-93966844 | None:intergenic |
| GTTTACACGCAAGATGCCTC+TGG | 0.510856 | 7:+93966693 | MsG0780041689.01.T01:CDS |
| TTGCAGCATGCAGAGACTGC+GGG | 0.517119 | 7:+93967287 | MsG0780041689.01.T01:CDS |
| TGTCTCTTAGGGCTTACAAA+TGG | 0.520478 | 7:+93967218 | MsG0780041689.01.T01:CDS |
| TGCAAGCATCCTAAGAAGAG+AGG | 0.520652 | 7:-93967149 | None:intergenic |
| CTCTTCTTAGGATGCTTGCA+CGG | 0.521892 | 7:+93967152 | MsG0780041689.01.T01:CDS |
| ACAATCAAGTGGTATGGGCT+CGG | 0.525660 | 7:+93966915 | MsG0780041689.01.T01:CDS |
| ACCGCCTGCGTGTACCTCTC+CGG | 0.532675 | 7:-93966365 | None:intergenic |
| GGCTGTTGGGATTTCAGGTG+TGG | 0.535654 | 7:+93966295 | MsG0780041689.01.T01:CDS |
| AAATCATCAATACACTGGTA+AGG | 0.536010 | 7:-93967244 | None:intergenic |
| TGTGATTATGTTCATATGCA+TGG | 0.539930 | 7:+93966755 | MsG0780041689.01.T01:CDS |
| GGATCTATTCTTGGCTCCGC+CGG | 0.541157 | 7:+93966335 | MsG0780041689.01.T01:CDS |
| TGTCGTGTATGTTAAGGGTC+GGG | 0.543187 | 7:+93966243 | None:intergenic |
| TGGGAACAATCAAGTGGTAT+GGG | 0.553185 | 7:+93966910 | MsG0780041689.01.T01:CDS |
| ATACCACTTGATTGTTCCCA+AGG | 0.560555 | 7:-93966907 | None:intergenic |
| GTGGCTAATGCTTTGGTGCA+GGG | 0.564289 | 7:+93966314 | MsG0780041689.01.T01:CDS |
| AGACACGTTAATAGTGTCAC+AGG | 0.565534 | 7:-93967200 | None:intergenic |
| TCAACTGTATGGGATACCTT+GGG | 0.568396 | 7:+93966891 | MsG0780041689.01.T01:CDS |
| AGGACCATTGTCGTCTTCAA+CGG | 0.572794 | 7:-93966847 | None:intergenic |
| GTGTCACAGGAATCTCTGTC+CGG | 0.575678 | 7:-93967187 | None:intergenic |
| GTACCTCTCCGGCAACTCAC+CGG | 0.590223 | 7:-93966354 | None:intergenic |
| AGCTAAAATCATCAATACAC+TGG | 0.598738 | 7:-93967249 | None:intergenic |
| ACATCTTCTGTAATGTAACC+AGG | 0.604109 | 7:-93966975 | None:intergenic |
| ACGCAGGCGGTCATTGCTGG+GGG | 0.609305 | 7:+93966377 | MsG0780041689.01.T01:CDS |
| GTTGCAGCATGCAGAGACTG+CGG | 0.611240 | 7:+93967286 | MsG0780041689.01.T01:CDS |
| TGTCTGGAGATCAACTGTAT+GGG | 0.613864 | 7:+93966881 | MsG0780041689.01.T01:CDS |
| GCAAGCATCCTAAGAAGAGA+GGG | 0.616215 | 7:-93967148 | None:intergenic |
| AATCTTTAAGAAGCTGAGAG+TGG | 0.626615 | 7:-93966998 | None:intergenic |
| CCTCTCCGGCAACTCACCGG+CGG | 0.634884 | 7:-93966351 | None:intergenic |
| CTCCAGACAGATACTGTCAA+AGG | 0.635770 | 7:-93966867 | None:intergenic |
| CCGCCGGTGAGTTGCCGGAG+AGG | 0.644765 | 7:+93966351 | MsG0780041689.01.T01:CDS |
| GCCGGAGAGGTACACGCAGG+CGG | 0.656282 | 7:+93966364 | MsG0780041689.01.T01:CDS |
| TGCAGCATGCAGAGACTGCG+GGG | 0.670996 | 7:+93967288 | MsG0780041689.01.T01:CDS |
| ATACCTTGGGAACAATCAAG+TGG | 0.688192 | 7:+93966904 | MsG0780041689.01.T01:CDS |
| GCCGCCGTTGAAGACGACAA+TGG | 0.692231 | 7:+93966843 | MsG0780041689.01.T01:CDS |
| TAATGAACTTAAGATTCAGG+CGG | 0.703355 | 7:+93966821 | MsG0780041689.01.T01:CDS |
| GTTGCCGGAGAGGTACACGC+AGG | 0.746866 | 7:+93966361 | MsG0780041689.01.T01:CDS |
| CTAGAAGGTATACTGCAGTG+AGG | 0.762315 | 7:-93967076 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATTATAGTACTTTATAAT+GGG | - | Chr7:93966807-93966826 | None:intergenic | 15.0% |
| !! | TTCATTATAGTACTTTATAA+TGG | - | Chr7:93966808-93966827 | None:intergenic | 15.0% |
| !! | AATAAAACATGATATGAGAA+TGG | - | Chr7:93966495-93966514 | None:intergenic | 20.0% |
| !! | ATAAAACATGATATGAGAAT+GGG | - | Chr7:93966494-93966513 | None:intergenic | 20.0% |
| ! | ACACATTAAAGCAAGTAATA+AGG | - | Chr7:93967037-93967056 | None:intergenic | 25.0% |
| ! | CTATAATGAACTTAAGATTC+AGG | + | Chr7:93966818-93966837 | MsG0780041689.01.T01:CDS | 25.0% |
| ! | TGAATGGAAAATAATGTGTA+AGG | + | Chr7:93966565-93966584 | MsG0780041689.01.T01:intron | 25.0% |
| !! | GTAAATGGTTTTTCATTTCA+GGG | + | Chr7:93966634-93966653 | MsG0780041689.01.T01:intron | 25.0% |
| !! | TAAATGGTTTTTCATTTCAG+GGG | + | Chr7:93966635-93966654 | MsG0780041689.01.T01:intron | 25.0% |
| !!! | ACAAATAGTTTTTTGTATGC+TGG | + | Chr7:93966533-93966552 | MsG0780041689.01.T01:intron | 25.0% |
| !!! | TTTTTTTCTTTCCCTACTTT+TGG | + | Chr7:93966437-93966456 | MsG0780041689.01.T01:intron | 25.0% |
| AAATCATCAATACACTGGTA+AGG | - | Chr7:93967247-93967266 | None:intergenic | 30.0% | |
| AAGCAAGTAATAAGGAGAAT+TGG | - | Chr7:93967029-93967048 | None:intergenic | 30.0% | |
| AGCTAAAATCATCAATACAC+TGG | - | Chr7:93967252-93967271 | None:intergenic | 30.0% | |
| AGTGTGTTCTTCTTAGTTAT+TGG | + | Chr7:93967317-93967336 | MsG0780041689.01.T01:CDS | 30.0% | |
| GAGAATGCAAAAATTGCAAT+CGG | + | Chr7:93967098-93967117 | MsG0780041689.01.T01:CDS | 30.0% | |
| TAATGAACTTAAGATTCAGG+CGG | + | Chr7:93966821-93966840 | MsG0780041689.01.T01:CDS | 30.0% | |
| TGTGATTATGTTCATATGCA+TGG | + | Chr7:93966755-93966774 | MsG0780041689.01.T01:CDS | 30.0% | |
| TTTAATGTGTTTGACCTTGT+TGG | + | Chr7:93967047-93967066 | MsG0780041689.01.T01:CDS | 30.0% | |
| ! | ATTGCTTGTTTCTTGAACTT+TGG | + | Chr7:93966607-93966626 | MsG0780041689.01.T01:intron | 30.0% |
| ! | CAATTTTTGCATTCTCTAGA+AGG | - | Chr7:93967094-93967113 | None:intergenic | 30.0% |
| ! | CAGCTTTTGTAAATATCCTT+AGG | - | Chr7:93966674-93966693 | None:intergenic | 30.0% |
| ! | GGTAAATGGTTTTTCATTTC+AGG | + | Chr7:93966633-93966652 | MsG0780041689.01.T01:intron | 30.0% |
| ! | TTGAACTTTGGAAAGGTAAA+TGG | + | Chr7:93966619-93966638 | MsG0780041689.01.T01:intron | 30.0% |
| ! | TTGTTTCTTGAACTTTGGAA+AGG | + | Chr7:93966612-93966631 | MsG0780041689.01.T01:intron | 30.0% |
| !! | CTCTATTATAGCTTGGTTTT+GGG | + | Chr7:93967352-93967371 | MsG0780041689.01.T01:CDS | 30.0% |
| !!! | AGTTTTTTGTATGCTGGATT+TGG | + | Chr7:93966539-93966558 | MsG0780041689.01.T01:intron | 30.0% |
| !!! | GTTTTTTGTATGCTGGATTT+GGG | + | Chr7:93966540-93966559 | MsG0780041689.01.T01:intron | 30.0% |
| ACACAACTTCAACCAAAAGT+AGG | - | Chr7:93966452-93966471 | None:intergenic | 35.0% | |
| ACACTATTAACGTGTCTCTT+AGG | + | Chr7:93967206-93967225 | MsG0780041689.01.T01:CDS | 35.0% | |
| ACATCTTCTGTAATGTAACC+AGG | - | Chr7:93966978-93966997 | None:intergenic | 35.0% | |
| ACTCTCAGCTTCTTAAAGAT+TGG | + | Chr7:93967000-93967019 | MsG0780041689.01.T01:CDS | 35.0% | |
| CACAACTTCAACCAAAAGTA+GGG | - | Chr7:93966451-93966470 | None:intergenic | 35.0% | |
| CACTATTAACGTGTCTCTTA+GGG | + | Chr7:93967207-93967226 | MsG0780041689.01.T01:CDS | 35.0% | |
| GTTCTTCTTAGTTATTGGTC+TGG | + | Chr7:93967322-93967341 | MsG0780041689.01.T01:CDS | 35.0% | |
| ! | AATCTTTAAGAAGCTGAGAG+TGG | - | Chr7:93967001-93967020 | None:intergenic | 35.0% |
| ! | GCTCTATTATAGCTTGGTTT+TGG | + | Chr7:93967351-93967370 | MsG0780041689.01.T01:CDS | 35.0% |
| !! | TTGTTTTTCCCTCTCTTCTT+AGG | + | Chr7:93967140-93967159 | MsG0780041689.01.T01:CDS | 35.0% |
| AGACACGTTAATAGTGTCAC+AGG | - | Chr7:93967203-93967222 | None:intergenic | 40.0% | |
| ATACCACTTGATTGTTCCCA+AGG | - | Chr7:93966910-93966929 | None:intergenic | 40.0% | |
| ATACCTTGGGAACAATCAAG+TGG | + | Chr7:93966904-93966923 | MsG0780041689.01.T01:CDS | 40.0% | |
| ATCAACTGTATGGGATACCT+TGG | + | Chr7:93966890-93966909 | MsG0780041689.01.T01:CDS | 40.0% | |
| ATCTCTGTCCGGAAGAATTT+CGG | - | Chr7:93967179-93967198 | None:intergenic | 40.0% | |
| TCAACTGTATGGGATACCTT+GGG | + | Chr7:93966891-93966910 | MsG0780041689.01.T01:CDS | 40.0% | |
| TGGGAACAATCAAGTGGTAT+GGG | + | Chr7:93966910-93966929 | MsG0780041689.01.T01:CDS | 40.0% | |
| TGTCTCTTAGGGCTTACAAA+TGG | + | Chr7:93967218-93967237 | MsG0780041689.01.T01:CDS | 40.0% | |
| TGTCTGGAGATCAACTGTAT+GGG | + | Chr7:93966881-93966900 | MsG0780041689.01.T01:CDS | 40.0% | |
| TTGGGAACAATCAAGTGGTA+TGG | + | Chr7:93966909-93966928 | MsG0780041689.01.T01:CDS | 40.0% | |
| ! | AGAGATTAGCACTCTTTTGC+AGG | - | Chr7:93966719-93966738 | None:intergenic | 40.0% |
| ! | ATGCTGGATTTGGGTTTGAA+TGG | + | Chr7:93966549-93966568 | MsG0780041689.01.T01:intron | 40.0% |
| ! | TTAAGGGTCGGGTTGTATAA+CGG | + | Chr7:93966254-93966273 | MsG0780041689.01.T01:CDS | 40.0% |
| ACAATCAAGTGGTATGGGCT+CGG | + | Chr7:93966915-93966934 | MsG0780041689.01.T01:CDS | 45.0% | |
| AGGACCATTGTCGTCTTCAA+CGG | - | Chr7:93966850-93966869 | None:intergenic | 45.0% | |
| CTCCAGACAGATACTGTCAA+AGG | - | Chr7:93966870-93966889 | None:intergenic | 45.0% | |
| CTCTTCTTAGGATGCTTGCA+CGG | + | Chr7:93967152-93967171 | MsG0780041689.01.T01:CDS | 45.0% | |
| CTGTCTGGAGATCAACTGTA+TGG | + | Chr7:93966880-93966899 | MsG0780041689.01.T01:CDS | 45.0% | |
| GCAAGCATCCTAAGAAGAGA+GGG | - | Chr7:93967151-93967170 | None:intergenic | 45.0% | |
| GTCCTTTGACAGTATCTGTC+TGG | + | Chr7:93966865-93966884 | MsG0780041689.01.T01:CDS | 45.0% | |
| GTGACGCTTGCAATATTTCC+TGG | + | Chr7:93966957-93966976 | MsG0780041689.01.T01:CDS | 45.0% | |
| TGCAAGCATCCTAAGAAGAG+AGG | - | Chr7:93967152-93967171 | None:intergenic | 45.0% | |
| TTCAGGTGTGGCTAATGCTT+TGG | + | Chr7:93966307-93966326 | MsG0780041689.01.T01:CDS | 45.0% | |
| TTGGTGCAGGGATCTATTCT+TGG | + | Chr7:93966326-93966345 | MsG0780041689.01.T01:CDS | 45.0% | |
| ! | CTAGAAGGTATACTGCAGTG+AGG | - | Chr7:93967079-93967098 | None:intergenic | 45.0% |
| ! | GGGTGCTTGTTTCTTTCCTA+AGG | + | Chr7:93966655-93966674 | MsG0780041689.01.T01:CDS | 45.0% |
| ! | TAAGGGTCGGGTTGTATAAC+GGG | + | Chr7:93966255-93966274 | MsG0780041689.01.T01:CDS | 45.0% |
| ! | TGCTGCAACTTCACGGTTTT+AGG | - | Chr7:93967275-93967294 | None:intergenic | 45.0% |
| ! | TTAGTTATTGGTCTGGCTGC+TGG | + | Chr7:93967329-93967348 | MsG0780041689.01.T01:CDS | 45.0% |
| !! | CTGCTGGCTCTATTATAGCT+TGG | + | Chr7:93967345-93967364 | MsG0780041689.01.T01:CDS | 45.0% |
| !! | GAAAAAAAAAAAAAAAAAAA+AGG | - | Chr7:93966425-93966444 | None:intergenic | 5.0% |
| ACCATTGTCGTCTTCAACGG+CGG | - | Chr7:93966847-93966866 | None:intergenic | 50.0% | |
| CTCTGCATGCTGCAACTTCA+CGG | - | Chr7:93967282-93967301 | None:intergenic | 50.0% | |
| GTGTCACAGGAATCTCTGTC+CGG | - | Chr7:93967190-93967209 | None:intergenic | 50.0% | |
| GTTTACACGCAAGATGCCTC+TGG | + | Chr7:93966693-93966712 | MsG0780041689.01.T01:CDS | 50.0% | |
| TGCACGGTCCGAAATTCTTC+CGG | + | Chr7:93967168-93967187 | MsG0780041689.01.T01:CDS | 50.0% | |
| ! | ACGGGTTTTACGTCACTGCT+GGG | + | Chr7:93966273-93966292 | MsG0780041689.01.T01:CDS | 50.0% |
| ! | CAGTGAGGCTTTTGCCAACA+AGG | - | Chr7:93967064-93967083 | None:intergenic | 50.0% |
| ! | GTGGCTAATGCTTTGGTGCA+GGG | + | Chr7:93966314-93966333 | MsG0780041689.01.T01:CDS | 50.0% |
| ! | TGTGGCTAATGCTTTGGTGC+AGG | + | Chr7:93966313-93966332 | MsG0780041689.01.T01:CDS | 50.0% |
| !! | AACGGGTTTTACGTCACTGC+TGG | + | Chr7:93966272-93966291 | MsG0780041689.01.T01:CDS | 50.0% |
| GGATCTATTCTTGGCTCCGC+CGG | + | Chr7:93966335-93966354 | MsG0780041689.01.T01:CDS | 55.0% | |
| GTTGCAGCATGCAGAGACTG+CGG | + | Chr7:93967286-93967305 | MsG0780041689.01.T01:CDS | 55.0% | |
| TTGCAGCATGCAGAGACTGC+GGG | + | Chr7:93967287-93967306 | MsG0780041689.01.T01:CDS | 55.0% | |
| ! | AGCACTCTTTTGCAGGCCAG+AGG | - | Chr7:93966712-93966731 | None:intergenic | 55.0% |
| ! | CGGGTTTTACGTCACTGCTG+GGG | + | Chr7:93966274-93966293 | MsG0780041689.01.T01:CDS | 55.0% |
| ! | GGCTGTTGGGATTTCAGGTG+TGG | + | Chr7:93966295-93966314 | MsG0780041689.01.T01:CDS | 55.0% |
| ACACGCAGGCGGTCATTGCT+GGG | + | Chr7:93966375-93966394 | MsG0780041689.01.T01:CDS | 60.0% | |
| ACGTCACTGCTGGGGCTGTT+GGG | + | Chr7:93966282-93966301 | MsG0780041689.01.T01:CDS | 60.0% | |
| GCCGCCGTTGAAGACGACAA+TGG | + | Chr7:93966843-93966862 | MsG0780041689.01.T01:CDS | 60.0% | |
| GCTGGGGCTGTTGGGATTTC+AGG | + | Chr7:93966290-93966309 | MsG0780041689.01.T01:CDS | 60.0% | |
| GTACCTCTCCGGCAACTCAC+CGG | - | Chr7:93966357-93966376 | None:intergenic | 60.0% | |
| TACACGCAGGCGGTCATTGC+TGG | + | Chr7:93966374-93966393 | MsG0780041689.01.T01:CDS | 60.0% | |
| TACGTCACTGCTGGGGCTGT+TGG | + | Chr7:93966281-93966300 | MsG0780041689.01.T01:CDS | 60.0% | |
| TGCAGCATGCAGAGACTGCG+GGG | + | Chr7:93967288-93967307 | MsG0780041689.01.T01:CDS | 60.0% | |
| !! | ATTGCTGGGGGTGCTGCTTC+TGG | + | Chr7:93966389-93966408 | MsG0780041689.01.T01:CDS | 60.0% |
| ACCGCCTGCGTGTACCTCTC+CGG | - | Chr7:93966368-93966387 | None:intergenic | 65.0% | |
| ACGCAGGCGGTCATTGCTGG+GGG | + | Chr7:93966377-93966396 | MsG0780041689.01.T01:CDS | 65.0% | |
| CACGCAGGCGGTCATTGCTG+GGG | + | Chr7:93966376-93966395 | MsG0780041689.01.T01:CDS | 65.0% | |
| ! | GTTGCCGGAGAGGTACACGC+AGG | + | Chr7:93966361-93966380 | MsG0780041689.01.T01:CDS | 65.0% |
| CCTCTCCGGCAACTCACCGG+CGG | - | Chr7:93966354-93966373 | None:intergenic | 70.0% | |
| TGGCTCCGCCGGTGAGTTGC+CGG | + | Chr7:93966346-93966365 | MsG0780041689.01.T01:CDS | 70.0% | |
| ! | GCCGGAGAGGTACACGCAGG+CGG | + | Chr7:93966364-93966383 | MsG0780041689.01.T01:CDS | 70.0% |
| CCGCCGGTGAGTTGCCGGAG+AGG | + | Chr7:93966351-93966370 | MsG0780041689.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 93966251 | 93967382 | 93966251 | ID=MsG0780041689.01;Name=MsG0780041689.01 |
| Chr7 | mRNA | 93966251 | 93967382 | 93966251 | ID=MsG0780041689.01.T01;Parent=MsG0780041689.01;Name=MsG0780041689.01.T01;_AED=0.27;_eAED=0.28;_QI=0|0|0|1|1|1|2|0|295 |
| Chr7 | exon | 93966251 | 93966410 | 93966251 | ID=MsG0780041689.01.T01:exon:20597;Parent=MsG0780041689.01.T01 |
| Chr7 | exon | 93966655 | 93967382 | 93966655 | ID=MsG0780041689.01.T01:exon:20598;Parent=MsG0780041689.01.T01 |
| Chr7 | CDS | 93966251 | 93966410 | 93966251 | ID=MsG0780041689.01.T01:cds;Parent=MsG0780041689.01.T01 |
| Chr7 | CDS | 93966655 | 93967382 | 93966655 | ID=MsG0780041689.01.T01:cds;Parent=MsG0780041689.01.T01 |
| Gene Sequence |
| Protein sequence |
