AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880041928.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041928.01.T01 MTR_8g007140 94.377 409 23 0 1 409 1 409 0.0 764
MsG0880041928.01.T01 MTR_8g007095 56.635 422 155 12 5 402 4 421 1.67e-152 438
MsG0880041928.01.T01 MTR_8g007090 56.161 422 157 12 5 402 4 421 1.24e-150 433
MsG0880041928.01.T01 MTR_8g007040 54.028 422 167 9 5 405 4 419 4.45e-147 424
MsG0880041928.01.T01 MTR_8g007065 54.632 421 163 10 5 405 4 416 2.67e-144 417
MsG0880041928.01.T01 MTR_8g007125 57.213 409 153 8 5 397 4 406 3.60e-140 407
MsG0880041928.01.T01 MTR_1g019940 46.429 392 178 8 22 383 10 399 2.09e-105 318
MsG0880041928.01.T01 MTR_1g019940 46.173 392 177 9 22 383 10 397 8.90e-103 311
MsG0880041928.01.T01 MTR_5g017670 43.750 384 186 9 31 385 14 396 1.32e-96 295
MsG0880041928.01.T01 MTR_3g101410 45.758 389 181 7 23 383 10 396 1.79e-96 295
MsG0880041928.01.T01 MTR_3g101400 46.015 389 180 7 23 383 10 396 3.71e-95 291
MsG0880041928.01.T01 MTR_5g017680 43.307 381 188 6 31 383 8 388 1.25e-94 290
MsG0880041928.01.T01 MTR_1g019940 44.364 275 132 5 130 383 6 280 9.01e-67 214
MsG0880041928.01.T01 MTR_1g095165 30.026 383 224 16 33 383 75 445 7.14e-32 126
MsG0880041928.01.T01 MTR_1g072190 31.064 235 145 7 35 254 32 264 1.50e-25 107
MsG0880041928.01.T01 MTR_7g094940 30.085 236 146 7 35 254 32 264 1.35e-22 99.0
MsG0880041928.01.T01 MTR_2g029510 28.532 361 221 14 33 383 69 402 1.37e-21 96.7
MsG0880041928.01.T01 MTR_0368s0010 30.769 247 147 12 151 383 45 281 6.44e-17 81.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041928.01.T01 AT4G37070 45.269 391 184 8 21 383 7 395 5.20e-103 311
MsG0880041928.01.T01 AT2G26560 46.649 388 176 8 24 383 10 394 6.09e-101 306
MsG0880041928.01.T01 AT4G37070 45.383 379 177 8 21 371 7 383 2.19e-99 301
MsG0880041928.01.T01 AT4G37070 45.383 379 177 8 21 371 7 383 2.19e-99 301
MsG0880041928.01.T01 AT4G37060 43.544 395 193 7 26 392 12 404 3.56e-98 299
MsG0880041928.01.T01 AT4G37070 43.651 378 174 8 21 371 7 372 9.61e-93 284
MsG0880041928.01.T01 AT4G37060 39.906 426 195 7 26 392 12 435 4.27e-92 285
MsG0880041928.01.T01 AT4G37050 43.622 392 187 8 26 383 28 419 3.10e-86 269
MsG0880041928.01.T01 AT5G43590 44.909 383 184 9 26 383 7 387 9.65e-84 261
MsG0880041928.01.T01 AT5G43590 44.909 383 184 9 26 383 74 454 5.80e-83 262
MsG0880041928.01.T01 AT3G54950 31.500 400 237 16 11 383 66 455 1.64e-37 142
MsG0880041928.01.T01 AT2G39220 31.635 373 221 16 33 383 108 468 6.22e-35 135
MsG0880041928.01.T01 AT3G63200 33.054 239 131 9 35 253 32 261 3.08e-27 112
MsG0880041928.01.T01 AT4G29800 29.016 386 226 15 33 383 121 493 5.45e-25 107
MsG0880041928.01.T01 AT4G29800 28.684 380 234 13 33 383 121 492 7.23e-24 103

Find 93 sgRNAs with CRISPR-Local

Find 321 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATTTCTTTGTATTTAT+TGG 0.156371 8:+1336236 MsG0880041928.01.T01:three_prime_UTR
TTCAATTCTCAGCAGCATTT+TGG 0.185373 8:+1335102 MsG0880041928.01.T01:CDS
TTAAAATTTGAGAATATAAC+TGG 0.264691 8:-1334583 None:intergenic
ACCATCATTTGCAAAGTAAT+AGG 0.269053 8:-1334787 None:intergenic
TGAAAACTACCTTAGAATTC+AGG 0.285893 8:+1335220 MsG0880041928.01.T01:CDS
ATCAACTTCTACAATAAATA+TGG 0.318962 8:+1332529 MsG0880041928.01.T01:CDS
TATAGGATGTGGAGCTAAAA+TGG 0.330220 8:+1335052 MsG0880041928.01.T01:CDS
AGAGGACGAGTAGGGTCATT+TGG 0.330231 8:-1332487 None:intergenic
TGATGGTGCTGAATTCAATT+TGG 0.335440 8:+1334803 MsG0880041928.01.T01:CDS
ATTGATGGTGGTGGTATTAG+AGG 0.339376 8:+1331866 MsG0880041928.01.T01:CDS
CCACTTAGAAAAGGCTCTTC+AGG 0.351405 8:+1331913 MsG0880041928.01.T01:CDS
TGTGGAGCTAAAATGGTTAC+AGG 0.363590 8:+1335059 MsG0880041928.01.T01:CDS
TTTGCTAGTCAGTTTATTGC+TGG 0.376518 8:+1331788 MsG0880041928.01.T01:CDS
GCTGAATTCAATTTGGTTGA+TGG 0.381802 8:+1334810 MsG0880041928.01.T01:CDS
CCCTATTACTTTGCAAATGA+TGG 0.384987 8:+1334786 MsG0880041928.01.T01:CDS
AAGATCTTGTTGTTGTCTAT+AGG 0.395144 8:+1335035 MsG0880041928.01.T01:CDS
CTAGTTTCATTGAATATTGA+AGG 0.397004 8:-1332553 None:intergenic
GCATATCAATAAATAATTTG+TGG 0.404688 8:+1336185 MsG0880041928.01.T01:three_prime_UTR
CCTTAACTTGTAGTAGCAAA+AGG 0.405709 8:-1336078 None:intergenic
TCAAAACTGGTTTGCTCAGA+AGG 0.410182 8:-1335888 None:intergenic
TATACTATACCTGAATTCTA+AGG 0.412151 8:-1335229 None:intergenic
AAGTGGTCAAGAATTATTGC+TGG 0.415963 8:-1331896 None:intergenic
GTGATTACATTTCCATAGGT+TGG 0.416976 8:-1331833 None:intergenic
CAAAGAGAAGCAGCTTCGTC+TGG 0.425004 8:+1335999 MsG0880041928.01.T01:CDS
CCATCATTTGCAAAGTAATA+GGG 0.426380 8:-1334786 None:intergenic
TAATGCTACACAAGCAAACT+TGG 0.433145 8:+1335840 MsG0880041928.01.T01:CDS
TAATAGGGTGGTAGATAAGT+TGG 0.438851 8:-1334771 None:intergenic
ATCACCATTCTCAGTATTGA+TGG 0.441301 8:+1331851 MsG0880041928.01.T01:CDS
TGCTGAGGCTCTTGAAAAGT+TGG 0.441624 8:+1335963 MsG0880041928.01.T01:CDS
AAGAACTCGCCGTCATACTT+TGG 0.449137 8:-1334466 None:intergenic
GAGGACGAGTAGGGTCATTT+GGG 0.449668 8:-1332486 None:intergenic
ATTTCTTTGTATTTATTGGT+TGG 0.450945 8:+1336240 MsG0880041928.01.T01:three_prime_UTR
AGAGAACACGATTTGATTGA+AGG 0.452050 8:-1331717 None:intergenic
GCAACATCTGGTCTTGCAAC+TGG 0.461298 8:+1335125 MsG0880041928.01.T01:CDS
ACTTCTTGATGTCAAATGTT+GGG 0.466922 8:-1334555 None:intergenic
TTGGAGGCCTGGGAAGACTT+TGG 0.467829 8:-1335192 None:intergenic
TAGAAGTTGATTACTTCTGC+AGG 0.477024 8:-1332517 None:intergenic
TTTCAGAATATTGGAGGCCT+GGG 0.477272 8:-1335202 None:intergenic
GAGCCTCAGCATTTGTACCT+TGG 0.477300 8:-1335951 None:intergenic
GGAGTAAATAGAGGACGAGT+AGG 0.481881 8:-1332496 None:intergenic
TATAGACAACAACAAGATCT+TGG 0.483030 8:-1335033 None:intergenic
AATTCTTGACCACTTAGAAA+AGG 0.483900 8:+1331904 MsG0880041928.01.T01:CDS
GAGCTACCACCTCCAACCTA+TGG 0.487732 8:+1331821 MsG0880041928.01.T01:CDS
TCTGGAAAAGAAATTGATCA+TGG 0.488875 8:+1336017 MsG0880041928.01.T01:CDS
CTTCAATATTCAATGAAACT+AGG 0.502447 8:+1332554 MsG0880041928.01.T01:CDS
AATGGTGATTACATTTCCAT+AGG 0.502697 8:-1331837 None:intergenic
GAGAACACGATTTGATTGAA+GGG 0.508103 8:-1331716 None:intergenic
TACCTTGCCAAAGTCTTCCC+AGG 0.511516 8:+1335185 MsG0880041928.01.T01:CDS
GGATCCATCCATGGATTCCA+TGG 0.511524 8:+1335816 MsG0880041928.01.T01:CDS
AACTTCTTGATGTCAAATGT+TGG 0.516027 8:-1334556 None:intergenic
TTGTTGTTGTCTATAGGATG+TGG 0.516995 8:+1335041 MsG0880041928.01.T01:CDS
AAATGTTGGGATTACTACAT+TGG 0.518986 8:-1334542 None:intergenic
CTTAACTTGTAGTAGCAAAA+GGG 0.520243 8:-1336077 None:intergenic
ACCACCATCAATACTGAGAA+TGG 0.522131 8:-1331855 None:intergenic
GTGATAGCTGGGACTAGCAC+TGG 0.525514 8:+1332430 MsG0880041928.01.T01:CDS
TGCTTGTGTAGCATTATCCA+TGG 0.528981 8:-1335833 None:intergenic
TTGAACATTATACAGTGGTT+GGG 0.529201 8:+1334426 MsG0880041928.01.T01:intron
TTGATGGTGGTGGTATTAGA+GGG 0.533729 8:+1331867 MsG0880041928.01.T01:CDS
AGCATTATCCATGGAATCCA+TGG 0.538932 8:-1335824 None:intergenic
AAATTGTCAGATATATGCAT+TGG 0.540624 8:+1334735 MsG0880041928.01.T01:CDS
ATTACATTTCCATAGGTTGG+AGG 0.542243 8:-1331830 None:intergenic
ACTTCTGCAGGAGTAAATAG+AGG 0.549216 8:-1332505 None:intergenic
TAATGTGTAGGAATATAACT+TGG 0.549716 8:+1335795 MsG0880041928.01.T01:intron
AATCAACCGTGAGAAGTACA+TGG 0.553492 8:-1336220 None:intergenic
TGAAGTGATAAAACAGCAGA+AGG 0.558437 8:+1335001 MsG0880041928.01.T01:CDS
AGGTGTGGCTGCATGTAATC+CGG 0.561900 8:+1334833 MsG0880041928.01.T01:CDS
ACATTTCCATAGGTTGGAGG+TGG 0.563266 8:-1331827 None:intergenic
TTGGAAAATCTTGCAAAGGT+AGG 0.567119 8:+1335859 MsG0880041928.01.T01:CDS
CAATTTGGTTGATGGAGGTG+TGG 0.567512 8:+1334818 MsG0880041928.01.T01:CDS
AAGTGATAAAACAGCAGAAG+GGG 0.577162 8:+1335003 MsG0880041928.01.T01:CDS
ATATAACTTGGATCCATCCA+TGG 0.582027 8:+1335807 MsG0880041928.01.T01:CDS
CGAGTAGGGTCATTTGGGTG+AGG 0.582448 8:-1332481 None:intergenic
TCGCCGTCATACTTTGGACC+CGG 0.585346 8:-1334460 None:intergenic
GAGTAAATAGAGGACGAGTA+GGG 0.588277 8:-1332495 None:intergenic
TGGTTGGGATGCTACATACC+CGG 0.590159 8:+1334441 MsG0880041928.01.T01:CDS
ATTCTCAGTATTGATGGTGG+TGG 0.592026 8:+1331857 MsG0880041928.01.T01:CDS
CGCCGTCATACTTTGGACCC+GGG 0.594145 8:-1334459 None:intergenic
GATAAAACAGCAGAAGGGGA+AGG 0.597486 8:+1335007 MsG0880041928.01.T01:CDS
AATGTGATAGTTTCAAGAAG+TGG 0.598372 8:-1336054 None:intergenic
GAATTCAATTTGGTTGATGG+AGG 0.600308 8:+1334813 MsG0880041928.01.T01:CDS
AAACTTGGAAAATCTTGCAA+AGG 0.605492 8:+1335855 MsG0880041928.01.T01:CDS
TTATCCATGGAATCCATGGA+TGG 0.623832 8:-1335820 None:intergenic
GGTTGGGATGCTACATACCC+GGG 0.628193 8:+1334442 MsG0880041928.01.T01:CDS
GAAGTGATAAAACAGCAGAA+GGG 0.631004 8:+1335002 MsG0880041928.01.T01:CDS
ACTGGTAGTTATGATAATGC+TGG 0.633459 8:+1335143 MsG0880041928.01.T01:CDS
TGTAGATACCAATGTGCCAG+AGG 0.633921 8:+1335918 MsG0880041928.01.T01:CDS
AAACCAAGGTACAAATGCTG+AGG 0.644587 8:+1335948 MsG0880041928.01.T01:CDS
GTGGAGCTAAAATGGTTACA+GGG 0.657226 8:+1335060 MsG0880041928.01.T01:CDS
ACCATTCTCAGTATTGATGG+TGG 0.665174 8:+1331854 MsG0880041928.01.T01:CDS
GGCCTGGGAAGACTTTGGCA+AGG 0.667341 8:-1335187 None:intergenic
TCATTTGCAAAGTAATAGGG+TGG 0.677945 8:-1334783 None:intergenic
ATAGCTGGGACTAGCACTGG+AGG 0.681155 8:+1332433 MsG0880041928.01.T01:CDS
TACCCGGGTCCAAAGTATGA+CGG 0.684563 8:+1334457 MsG0880041928.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGATATAATATTGATAA+AGG + Chr8:1332246-1332265 MsG0880041928.01.T01:intron 10.0%
!! ATATATATAATAAAATGCAA+GGG + Chr8:1332631-1332650 MsG0880041928.01.T01:intron 10.0%
!! ATCTTATATATCTTATATAT+TGG - Chr8:1335523-1335542 None:intergenic 10.0%
!! TATATATATAATAAAATGCA+AGG + Chr8:1332630-1332649 MsG0880041928.01.T01:intron 10.0%
!!! AATTTATTTTCTTGAATTAA+GGG + Chr8:1333945-1333964 MsG0880041928.01.T01:intron 10.0%
!!! ACATTATTTTTAATCTATAT+AGG - Chr8:1334288-1334307 None:intergenic 10.0%
!!! CATTATTTTTAATCTATATA+GGG - Chr8:1334287-1334306 None:intergenic 10.0%
!!! TAATTTATTTTCTTGAATTA+AGG + Chr8:1333944-1333963 MsG0880041928.01.T01:intron 10.0%
!!! TAATTTTTTTATTATAATCC+AGG + Chr8:1333204-1333223 MsG0880041928.01.T01:intron 10.0%
!!! TATTTTCTTTATTTCATTTA+TGG - Chr8:1333009-1333028 None:intergenic 10.0%
!!! TTTTTTAAAAGATAAATACA+AGG - Chr8:1333479-1333498 None:intergenic 10.0%
!! AATAGTTCTTTATCATAATT+TGG + Chr8:1333025-1333044 MsG0880041928.01.T01:intron 15.0%
!! ATAAGAAATTGCAAAAAATT+TGG - Chr8:1332702-1332721 None:intergenic 15.0%
!! CAAATGATAAAAAATAGATA+AGG + Chr8:1333174-1333193 MsG0880041928.01.T01:intron 15.0%
!! TAAGAAATTGCAAAAAATTT+GGG - Chr8:1332701-1332720 None:intergenic 15.0%
!! TCAAGAAAATAAATTATAGT+GGG - Chr8:1333940-1333959 None:intergenic 15.0%
!! TTAAAATTTGAGAATATAAC+TGG - Chr8:1334586-1334605 None:intergenic 15.0%
!! TTAAACTAAGAGAAAATAAA+AGG + Chr8:1332918-1332937 MsG0880041928.01.T01:intron 15.0%
!! TTCAAGAAAATAAATTATAG+TGG - Chr8:1333941-1333960 None:intergenic 15.0%
!! TTGATCACTTTATTATATAT+TGG - Chr8:1333898-1333917 None:intergenic 15.0%
!!! AAAATTTGCTATACATTTAT+AGG - Chr8:1332816-1332835 None:intergenic 15.0%
!!! AAACTTATTAATGTTTTTTG+AGG + Chr8:1334385-1334404 MsG0880041928.01.T01:intron 15.0%
!!! AAAGTGCATTTAATTTTAAT+TGG - Chr8:1334140-1334159 None:intergenic 15.0%
!!! AAATTTGCTATACATTTATA+GGG - Chr8:1332815-1332834 None:intergenic 15.0%
!!! AGTTATATTCTCAAATTTTA+AGG + Chr8:1334585-1334604 MsG0880041928.01.T01:CDS 15.0%
!!! ATATAGCAGATATTTTAATT+TGG + Chr8:1332351-1332370 MsG0880041928.01.T01:intron 15.0%
!!! CATTTAATTTTAATTGGAAA+TGG - Chr8:1334134-1334153 None:intergenic 15.0%
!!! TGATAAAATTAGTTTGAATT+TGG - Chr8:1335654-1335673 None:intergenic 15.0%
!! AAATAATTAATCTGTGTTTG+TGG + Chr8:1333656-1333675 MsG0880041928.01.T01:intron 20.0%
!! AAATTGATCATGGAAAAATT+GGG + Chr8:1336027-1336046 MsG0880041928.01.T01:CDS 20.0%
!! AAGCTATAGTTTCTTAAAAA+TGG - Chr8:1334885-1334904 None:intergenic 20.0%
!! ACAAACACAGATTAATTATT+TGG - Chr8:1333657-1333676 None:intergenic 20.0%
!! ATAAATTGATTATCGTAGAA+CGG - Chr8:1332958-1332977 None:intergenic 20.0%
!! ATAACGAGTTAATTAATTAC+CGG - Chr8:1334855-1334874 None:intergenic 20.0%
!! ATAGGAAATATGATTATAAC+AGG - Chr8:1333601-1333620 None:intergenic 20.0%
!! ATCAACTTCTACAATAAATA+TGG + Chr8:1332529-1332548 MsG0880041928.01.T01:CDS 20.0%
!! ATTTCTTTGTATTTATTGGT+TGG + Chr8:1336240-1336259 MsG0880041928.01.T01:three_prime_UTR 20.0%
!! CAGATTAATTATTTGGATTT+AGG - Chr8:1333650-1333669 None:intergenic 20.0%
!! CCAATGATAAATAGTAAAAT+AGG - Chr8:1333619-1333638 None:intergenic 20.0%
!! GCATATCAATAAATAATTTG+TGG + Chr8:1336185-1336204 MsG0880041928.01.T01:three_prime_UTR 20.0%
!! GGTATTAAAAAAAAATTGGA+GGG - Chr8:1333320-1333339 None:intergenic 20.0%
!! GGTTTATATAAGAAATTCAA+GGG - Chr8:1332732-1332751 None:intergenic 20.0%
!! GTTTATATAAGAAATTCAAG+GGG - Chr8:1332731-1332750 None:intergenic 20.0%
!! TAATAAAGTGATCAATTCTT+TGG + Chr8:1333903-1333922 MsG0880041928.01.T01:intron 20.0%
!! TAGGAAATATGATTATAACA+GGG - Chr8:1333600-1333619 None:intergenic 20.0%
!! TATATAAACCCCTATAAATT+GGG + Chr8:1332742-1332761 MsG0880041928.01.T01:intron 20.0%
!! TGGGTATTAAAAAAAAATTG+AGG - Chr8:1333285-1333304 None:intergenic 20.0%
!! TTATATAAACCCCTATAAAT+TGG + Chr8:1332741-1332760 MsG0880041928.01.T01:intron 20.0%
!!! AAATCTCATGATTTTTTTAC+GGG + Chr8:1333050-1333069 MsG0880041928.01.T01:intron 20.0%
!!! AACATGATTTTATATAACCT+CGG - Chr8:1332069-1332088 None:intergenic 20.0%
!!! CAAATCTCATGATTTTTTTA+CGG + Chr8:1333049-1333068 MsG0880041928.01.T01:intron 20.0%
!!! CCTATTTTACTATTTATCAT+TGG + Chr8:1333616-1333635 MsG0880041928.01.T01:intron 20.0%
!!! CTCTTTTGAAACAAATATAA+TGG + Chr8:1331736-1331755 MsG0880041928.01.T01:exon 20.0%
!!! GTTGATTTCTTTGTATTTAT+TGG + Chr8:1336236-1336255 MsG0880041928.01.T01:three_prime_UTR 20.0%
!!! TACTTCATGTATTTTTGTTT+TGG - Chr8:1333789-1333808 None:intergenic 20.0%
!!! TCAATTTTTTTCACACAATT+AGG - Chr8:1335421-1335440 None:intergenic 20.0%
! AAAAAATGCTGAATTAGTGA+CGG - Chr8:1333983-1334002 None:intergenic 25.0%
! AAAGAAATTGCCCAATTTAT+AGG - Chr8:1332755-1332774 None:intergenic 25.0%
! AAATTGTCAGATATATGCAT+TGG + Chr8:1334735-1334754 MsG0880041928.01.T01:CDS 25.0%
! AACAATGATTAGATTGAGAT+CGG - Chr8:1335395-1335414 None:intergenic 25.0%
! AAGAAATTGCCCAATTTATA+GGG - Chr8:1332754-1332773 None:intergenic 25.0%
! ATATACTATTGAACTTGATG+CGG - Chr8:1334233-1334252 None:intergenic 25.0%
! CATCAAGTTCAATAGTATAT+TGG + Chr8:1334233-1334252 MsG0880041928.01.T01:intron 25.0%
! CTAGTTTCATTGAATATTGA+AGG - Chr8:1332556-1332575 None:intergenic 25.0%
! CTTCAATATTCAATGAAACT+AGG + Chr8:1332554-1332573 MsG0880041928.01.T01:CDS 25.0%
! GAAATTGATCATGGAAAAAT+TGG + Chr8:1336026-1336045 MsG0880041928.01.T01:CDS 25.0%
! GGGTATTAAAAAAAAATTGG+AGG - Chr8:1333321-1333340 None:intergenic 25.0%
! GGGTTTATATAAGAAATTCA+AGG - Chr8:1332733-1332752 None:intergenic 25.0%
! TAAATTGATTATCGTAGAAC+GGG - Chr8:1332957-1332976 None:intergenic 25.0%
! TAATGTGTAGGAATATAACT+TGG + Chr8:1335795-1335814 MsG0880041928.01.T01:intron 25.0%
! TAATGTTGAACATTATACAG+TGG + Chr8:1334421-1334440 MsG0880041928.01.T01:intron 25.0%
! TATACTATACCTGAATTCTA+AGG - Chr8:1335232-1335251 None:intergenic 25.0%
! TATATAATAAAATGCAAGGG+CGG + Chr8:1332634-1332653 MsG0880041928.01.T01:intron 25.0%
! TATCTGCTATATATTTGAAC+AGG - Chr8:1332343-1332362 None:intergenic 25.0%
! TCTCAAAGAGACTAAAATAT+GGG + Chr8:1333086-1333105 MsG0880041928.01.T01:intron 25.0%
!! ACATGATTTTATATAACCTC+GGG - Chr8:1332068-1332087 None:intergenic 25.0%
!! GGTCACAATTACAAATATTT+TGG + Chr8:1333139-1333158 MsG0880041928.01.T01:intron 25.0%
!! TAAGGTAGTTTTCAGAATAT+TGG - Chr8:1335214-1335233 None:intergenic 25.0%
!! TCTACATTCATTTTCAAAAC+TGG - Chr8:1335904-1335923 None:intergenic 25.0%
!!! TGGGGGTATTAAAAAAAAAT+TGG - Chr8:1333324-1333343 None:intergenic 25.0%
AAAAATGCTGAATTAGTGAC+GGG - Chr8:1333982-1334001 None:intergenic 30.0%
AAACTTGGAAAATCTTGCAA+AGG + Chr8:1335855-1335874 MsG0880041928.01.T01:CDS 30.0%
AAATGTTGGGATTACTACAT+TGG - Chr8:1334545-1334564 None:intergenic 30.0%
AAATTGCAAAAAATTTGGGC+CGG - Chr8:1332697-1332716 None:intergenic 30.0%
AACTTCTTGATGTCAAATGT+TGG - Chr8:1334559-1334578 None:intergenic 30.0%
AATAGTATATTGGATGTGAG+TGG + Chr8:1334243-1334262 MsG0880041928.01.T01:intron 30.0%
AATGATCGATCTTAATGTGT+AGG + Chr8:1335783-1335802 MsG0880041928.01.T01:intron 30.0%
AATGGTGATTACATTTCCAT+AGG - Chr8:1331840-1331859 None:intergenic 30.0%
AATGTGATAGTTTCAAGAAG+TGG - Chr8:1336057-1336076 None:intergenic 30.0%
AATTCTTGACCACTTAGAAA+AGG + Chr8:1331904-1331923 MsG0880041928.01.T01:CDS 30.0%
ACCATCATTTGCAAAGTAAT+AGG - Chr8:1334790-1334809 None:intergenic 30.0%
ACTACAAACAAATGACAGTT+TGG - Chr8:1335623-1335642 None:intergenic 30.0%
ACTTCTTGATGTCAAATGTT+GGG - Chr8:1334558-1334577 None:intergenic 30.0%
AGAAATGTGAAAAATGCAGA+CGG - Chr8:1335546-1335565 None:intergenic 30.0%
AGAAATTGCCCAATTTATAG+GGG - Chr8:1332753-1332772 None:intergenic 30.0%
CAAAAACGAACACAAACAAA+AGG - Chr8:1331772-1331791 None:intergenic 30.0%
CATACATGTTTGGATAACAA+TGG - Chr8:1334050-1334069 None:intergenic 30.0%
CCATCATTTGCAAAGTAATA+GGG - Chr8:1334789-1334808 None:intergenic 30.0%
CTAATTCTAATAGGCCTAAA+AGG - Chr8:1333372-1333391 None:intergenic 30.0%
GGGGTTAAATTCTACATAAT+TGG - Chr8:1332197-1332216 None:intergenic 30.0%
GTCTCAAAGAGACTAAAATA+TGG + Chr8:1333085-1333104 MsG0880041928.01.T01:intron 30.0%
GTCTGCAAGATATGATAATT+TGG - Chr8:1334966-1334985 None:intergenic 30.0%
GTGTGTGAATAGTTAGAATA+TGG - Chr8:1332123-1332142 None:intergenic 30.0%
TAAAAAAAAATTGAGGCCCA+TGG - Chr8:1333278-1333297 None:intergenic 30.0%
TAAAACAAGAGGACAGAAAA+TGG - Chr8:1333348-1333367 None:intergenic 30.0%
TAAAATATGGGTATACTCCA+AGG + Chr8:1333098-1333117 MsG0880041928.01.T01:intron 30.0%
TACAAGGTGATGTATATATG+CGG - Chr8:1333463-1333482 None:intergenic 30.0%
TATAAACAGTAGCATGCAAA+AGG - Chr8:1332297-1332316 None:intergenic 30.0%
TATAGACAACAACAAGATCT+TGG - Chr8:1335036-1335055 None:intergenic 30.0%
TATGATGTGACATACATGTT+TGG - Chr8:1334060-1334079 None:intergenic 30.0%
TCTGGAAAAGAAATTGATCA+TGG + Chr8:1336017-1336036 MsG0880041928.01.T01:CDS 30.0%
TGAAAACTACCTTAGAATTC+AGG + Chr8:1335220-1335239 MsG0880041928.01.T01:CDS 30.0%
TGATCCTTCATCTTACAAAT+CGG + Chr8:1334330-1334349 MsG0880041928.01.T01:intron 30.0%
TGTAAGAGAGTCATGAAATA+TGG - Chr8:1335460-1335479 None:intergenic 30.0%
TTGAACATTATACAGTGGTT+GGG + Chr8:1334426-1334445 MsG0880041928.01.T01:intron 30.0%
! CATTAGAACGTTTTGTACAT+GGG - Chr8:1335767-1335786 None:intergenic 30.0%
! CTAGAATTTTTATAAAGCCC+GGG - Chr8:1332845-1332864 None:intergenic 30.0%
! CTTTTAGGCCTATTAGAATT+AGG + Chr8:1333370-1333389 MsG0880041928.01.T01:intron 30.0%
! CTTTTGCTACTACAAGTTAA+GGG + Chr8:1336079-1336098 MsG0880041928.01.T01:CDS 30.0%
! GAGAGTATAATTTAGTGCAT+AGG - Chr8:1335494-1335513 None:intergenic 30.0%
! GCTAGAATTTTTATAAAGCC+CGG - Chr8:1332846-1332865 None:intergenic 30.0%
! TATCTGACAATTTTGCATCT+TGG - Chr8:1334728-1334747 None:intergenic 30.0%
! TCATTAGAACGTTTTGTACA+TGG - Chr8:1335768-1335787 None:intergenic 30.0%
! TTTTTATTATAATCCAGGCC+TGG + Chr8:1333209-1333228 MsG0880041928.01.T01:intron 30.0%
!! AAGATCTTGTTGTTGTCTAT+AGG + Chr8:1335035-1335054 MsG0880041928.01.T01:CDS 30.0%
!! AATCATTTTGATGTGATAGC+TGG + Chr8:1332418-1332437 MsG0880041928.01.T01:CDS 30.0%
!! ATAACCGATTTGTAAGATGA+AGG - Chr8:1334337-1334356 None:intergenic 30.0%
!! ATCATTTTGATGTGATAGCT+GGG + Chr8:1332419-1332438 MsG0880041928.01.T01:CDS 30.0%
!! CTTAACTTGTAGTAGCAAAA+GGG - Chr8:1336080-1336099 None:intergenic 30.0%
!! TGGCTTTATCCATATGAAAA+TGG - Chr8:1334030-1334049 None:intergenic 30.0%
!!! ACGGTAGTCATTTTTATCTT+TGG + Chr8:1333432-1333451 MsG0880041928.01.T01:intron 30.0%
!!! ATAGCAAATTTTTTTTCGCC+CGG + Chr8:1332824-1332843 MsG0880041928.01.T01:intron 30.0%
!!! CGGTAGTCATTTTTATCTTT+GGG + Chr8:1333433-1333452 MsG0880041928.01.T01:intron 30.0%
!!! TTTGCATTGCCATTTTCATA+TGG + Chr8:1334018-1334037 MsG0880041928.01.T01:intron 30.0%
AAATGACTACCGTATACATG+AGG - Chr8:1333425-1333444 None:intergenic 35.0%
AAGTGATAAAACAGCAGAAG+GGG + Chr8:1335003-1335022 MsG0880041928.01.T01:CDS 35.0%
AAGTGGTCAAGAATTATTGC+TGG - Chr8:1331899-1331918 None:intergenic 35.0%
AATGCACTTTGCTTAGTAGT+AGG + Chr8:1334150-1334169 MsG0880041928.01.T01:intron 35.0%
AGAGAACACGATTTGATTGA+AGG - Chr8:1331720-1331739 None:intergenic 35.0%
ATATAACTTGGATCCATCCA+TGG + Chr8:1335807-1335826 MsG0880041928.01.T01:CDS 35.0%
ATGCACTTTGCTTAGTAGTA+GGG + Chr8:1334151-1334170 MsG0880041928.01.T01:intron 35.0%
CAAGAGGACCTAATTCTAAT+AGG - Chr8:1333381-1333400 None:intergenic 35.0%
CCAGAGGAAAAAATAAACCA+AGG + Chr8:1335934-1335953 MsG0880041928.01.T01:CDS 35.0%
CCCTATTACTTTGCAAATGA+TGG + Chr8:1334786-1334805 MsG0880041928.01.T01:CDS 35.0%
CTATTCACACACACTTTCAA+TGG + Chr8:1332131-1332150 MsG0880041928.01.T01:intron 35.0%
CTTGTGTATTTGCACATTGA+GGG - Chr8:1332218-1332237 None:intergenic 35.0%
GAAGTGATAAAACAGCAGAA+GGG + Chr8:1335002-1335021 MsG0880041928.01.T01:CDS 35.0%
GACAGTCTAGATATCAAACT+CGG - Chr8:1335373-1335392 None:intergenic 35.0%
GAGAACACGATTTGATTGAA+GGG - Chr8:1331719-1331738 None:intergenic 35.0%
GAGATTTGAATTATAACCCG+AGG + Chr8:1332049-1332068 MsG0880041928.01.T01:intron 35.0%
GCTGAATTCAATTTGGTTGA+TGG + Chr8:1334810-1334829 MsG0880041928.01.T01:CDS 35.0%
GGATTCGACCATCTTAAAAT+TGG - Chr8:1333849-1333868 None:intergenic 35.0%
GGTGATATATGCAAGGATAA+AGG - Chr8:1332276-1332295 None:intergenic 35.0%
GTAAACTTTGTTCATGCAGT+TGG + Chr8:1334689-1334708 MsG0880041928.01.T01:intron 35.0%
GTGATTACATTTCCATAGGT+TGG - Chr8:1331836-1331855 None:intergenic 35.0%
GTTGAACATTATACAGTGGT+TGG + Chr8:1334425-1334444 MsG0880041928.01.T01:intron 35.0%
TAATAGGGTGGTAGATAAGT+TGG - Chr8:1334774-1334793 None:intergenic 35.0%
TAATGCTACACAAGCAAACT+TGG + Chr8:1335840-1335859 MsG0880041928.01.T01:CDS 35.0%
TATAGGATGTGGAGCTAAAA+TGG + Chr8:1335052-1335071 MsG0880041928.01.T01:CDS 35.0%
TCAATGTGCAAATACACAAG+AGG + Chr8:1332218-1332237 MsG0880041928.01.T01:intron 35.0%
TCATTTGCAAAGTAATAGGG+TGG - Chr8:1334786-1334805 None:intergenic 35.0%
TCTTACAAATCGGTTATGCA+AGG + Chr8:1334340-1334359 MsG0880041928.01.T01:intron 35.0%
TCTTGTGTATTTGCACATTG+AGG - Chr8:1332219-1332238 None:intergenic 35.0%
TGAAGTGATAAAACAGCAGA+AGG + Chr8:1335001-1335020 MsG0880041928.01.T01:CDS 35.0%
TGCAAAAGGTGATATATGCA+AGG - Chr8:1332283-1332302 None:intergenic 35.0%
TTATCATATCTTGCAGACGT+TGG + Chr8:1334968-1334987 MsG0880041928.01.T01:intron 35.0%
TTGGAAAATCTTGCAAAGGT+AGG + Chr8:1335859-1335878 MsG0880041928.01.T01:CDS 35.0%
TTGTGTATTTGCACATTGAG+GGG - Chr8:1332217-1332236 None:intergenic 35.0%
TTTGCTAGTCAGTTTATTGC+TGG + Chr8:1331788-1331807 MsG0880041928.01.T01:CDS 35.0%
! ACTGGTAGTTATGATAATGC+TGG + Chr8:1335143-1335162 MsG0880041928.01.T01:CDS 35.0%
! ATCACCATTCTCAGTATTGA+TGG + Chr8:1331851-1331870 MsG0880041928.01.T01:CDS 35.0%
! ATTACATTTCCATAGGTTGG+AGG - Chr8:1331833-1331852 None:intergenic 35.0%
! CCTTTTGCTACTACAAGTTA+AGG + Chr8:1336078-1336097 MsG0880041928.01.T01:CDS 35.0%
! GGTAGTTTTCAGAATATTGG+AGG - Chr8:1335211-1335230 None:intergenic 35.0%
! TAGAAGTTGATTACTTCTGC+AGG - Chr8:1332520-1332539 None:intergenic 35.0%
! TCAATTCTCAGCAGCATTTT+GGG + Chr8:1335103-1335122 MsG0880041928.01.T01:CDS 35.0%
! TGATGGTGCTGAATTCAATT+TGG + Chr8:1334803-1334822 MsG0880041928.01.T01:CDS 35.0%
! TGTTTTCCATGTACTTCTCA+CGG + Chr8:1336214-1336233 MsG0880041928.01.T01:three_prime_UTR 35.0%
! TTCAATTCTCAGCAGCATTT+TGG + Chr8:1335102-1335121 MsG0880041928.01.T01:CDS 35.0%
! TTGTTGTTGTCTATAGGATG+TGG + Chr8:1335041-1335060 MsG0880041928.01.T01:CDS 35.0%
!! CCTTAACTTGTAGTAGCAAA+AGG - Chr8:1336081-1336100 None:intergenic 35.0%
!! GAATTCAATTTGGTTGATGG+AGG + Chr8:1334813-1334832 MsG0880041928.01.T01:CDS 35.0%
!!! CCTTGGTTTATTTTTTCCTC+TGG - Chr8:1335937-1335956 None:intergenic 35.0%
!!! TAGCAAATTTTTTTTCGCCC+GGG + Chr8:1332825-1332844 MsG0880041928.01.T01:intron 35.0%
!!! TATTTTTTCCTCTGGCACAT+TGG - Chr8:1335929-1335948 None:intergenic 35.0%
!!! TCCTCTTGTTTTAGCCTTTT+AGG + Chr8:1333355-1333374 MsG0880041928.01.T01:intron 35.0%
AAACCAAGGTACAAATGCTG+AGG + Chr8:1335948-1335967 MsG0880041928.01.T01:CDS 40.0%
AACCCATCCATTCAAAGAGA+AGG + Chr8:1333820-1333839 MsG0880041928.01.T01:intron 40.0%
AACTTTGTTCATGCAGTTGG+AGG + Chr8:1334692-1334711 MsG0880041928.01.T01:intron 40.0%
AAGAGGACAGAAAATGGTTG+GGG - Chr8:1333342-1333361 None:intergenic 40.0%
ACAAGAGGACAGAAAATGGT+TGG - Chr8:1333344-1333363 None:intergenic 40.0%
ACCACCATCAATACTGAGAA+TGG - Chr8:1331858-1331877 None:intergenic 40.0%
ACCCATCCATTCAAAGAGAA+GGG + Chr8:1333821-1333840 MsG0880041928.01.T01:intron 40.0%
ACTCCAATTGAGTGCACAAA+AGG + Chr8:1333736-1333755 MsG0880041928.01.T01:intron 40.0%
ACTTCTGCAGGAGTAAATAG+AGG - Chr8:1332508-1332527 None:intergenic 40.0%
AGAATTAGGTCCTCTTGCTT+TGG + Chr8:1333384-1333403 MsG0880041928.01.T01:intron 40.0%
AGCATTATCCATGGAATCCA+TGG - Chr8:1335827-1335846 None:intergenic 40.0%
ATGACCACAAAATTGAGTGC+AGG - Chr8:1335286-1335305 None:intergenic 40.0%
ATGTGCAAATACACAAGAGG+TGG + Chr8:1332221-1332240 MsG0880041928.01.T01:intron 40.0%
ATTGAGTGCACAAAAGGTGA+AGG + Chr8:1333742-1333761 MsG0880041928.01.T01:intron 40.0%
ATTGATTATCGTAGAACGGG+AGG - Chr8:1332954-1332973 None:intergenic 40.0%
CAAGAGGACAGAAAATGGTT+GGG - Chr8:1333343-1333362 None:intergenic 40.0%
GAGTAAATAGAGGACGAGTA+GGG - Chr8:1332498-1332517 None:intergenic 40.0%
GCAAATCAACTAGTGGCTTA+TGG - Chr8:1333870-1333889 None:intergenic 40.0%
GCCTAAAAGGCTAAAACAAG+AGG - Chr8:1333359-1333378 None:intergenic 40.0%
GTGGAGCTAAAATGGTTACA+GGG + Chr8:1335060-1335079 MsG0880041928.01.T01:CDS 40.0%
TGACCACAAAATTGAGTGCA+GGG - Chr8:1335285-1335304 None:intergenic 40.0%
TGCTTGTGTAGCATTATCCA+TGG - Chr8:1335836-1335855 None:intergenic 40.0%
TGTGCAAATACACAAGAGGT+GGG + Chr8:1332222-1332241 MsG0880041928.01.T01:intron 40.0%
TGTGGAGCTAAAATGGTTAC+AGG + Chr8:1335059-1335078 MsG0880041928.01.T01:CDS 40.0%
TGTGTATTTGCACATTGAGG+GGG - Chr8:1332216-1332235 None:intergenic 40.0%
TTATCCATGGAATCCATGGA+TGG - Chr8:1335823-1335842 None:intergenic 40.0%
TTGAATTAAGGGAAGACCCA+TGG + Chr8:1333956-1333975 MsG0880041928.01.T01:intron 40.0%
TTTCAGAATATTGGAGGCCT+GGG - Chr8:1335205-1335224 None:intergenic 40.0%
! AATCAACCGTGAGAAGTACA+TGG - Chr8:1336223-1336242 None:intergenic 40.0%
! ATTCCCTGCACTCAATTTTG+TGG + Chr8:1335279-1335298 MsG0880041928.01.T01:intron 40.0%
! CGTGACTGTTTTCATTTCAG+TGG - Chr8:1332873-1332892 None:intergenic 40.0%
! GACAATTTTGCATCTTGGCT+GGG - Chr8:1334723-1334742 None:intergenic 40.0%
! GACTGTTTTCATTTCAGTGG+CGG - Chr8:1332870-1332889 None:intergenic 40.0%
! GCACTCAATTTTGTGGTCAT+TGG + Chr8:1335286-1335305 MsG0880041928.01.T01:intron 40.0%
! TCACCTTTTGTGCACTCAAT+TGG - Chr8:1333742-1333761 None:intergenic 40.0%
! TGACAATTTTGCATCTTGGC+TGG - Chr8:1334724-1334743 None:intergenic 40.0%
! TGGCTGTAGCATCTTTTTGT+TGG + Chr8:1336260-1336279 MsG0880041928.01.T01:three_prime_UTR 40.0%
! TTTTCAGAATATTGGAGGCC+TGG - Chr8:1335206-1335225 None:intergenic 40.0%
!! ACCATTCTCAGTATTGATGG+TGG + Chr8:1331854-1331873 MsG0880041928.01.T01:CDS 40.0%
!! ATGGTTCTAAGAGTCGTCAT+CGG - Chr8:1332104-1332123 None:intergenic 40.0%
!! ATTCTCAGTATTGATGGTGG+TGG + Chr8:1331857-1331876 MsG0880041928.01.T01:CDS 40.0%
!! ATTGATGGTGGTGGTATTAG+AGG + Chr8:1331866-1331885 MsG0880041928.01.T01:CDS 40.0%
!! GAAGGGGACCAATTTTAAGA+TGG + Chr8:1333838-1333857 MsG0880041928.01.T01:intron 40.0%
!! TAAGCCACTAGTTGATTTGC+AGG + Chr8:1333870-1333889 MsG0880041928.01.T01:intron 40.0%
!! TCAAAACTGGTTTGCTCAGA+AGG - Chr8:1335891-1335910 None:intergenic 40.0%
!! TTGATGGTGGTGGTATTAGA+GGG + Chr8:1331867-1331886 MsG0880041928.01.T01:CDS 40.0%
AAAAAATTGAGGCCCATGGC+TGG - Chr8:1333274-1333293 None:intergenic 45.0%
AAAAATTGAGGCCCATGGCT+GGG - Chr8:1333273-1333292 None:intergenic 45.0%
AAAATGCAAGGGCGGTTCTA+AGG + Chr8:1332642-1332661 MsG0880041928.01.T01:intron 45.0%
AAGAACTCGCCGTCATACTT+TGG - Chr8:1334469-1334488 None:intergenic 45.0%
AGAGGACAGAAAATGGTTGG+GGG - Chr8:1333341-1333360 None:intergenic 45.0%
AGGACCAAGAACAAGACATG+TGG + Chr8:1333118-1333137 MsG0880041928.01.T01:intron 45.0%
CCACTTAGAAAAGGCTCTTC+AGG + Chr8:1331913-1331932 MsG0880041928.01.T01:CDS 45.0%
CCCATCCATTCAAAGAGAAG+GGG + Chr8:1333822-1333841 MsG0880041928.01.T01:intron 45.0%
CCCCTTCTCTTTGAATGGAT+GGG - Chr8:1333825-1333844 None:intergenic 45.0%
GATAAAACAGCAGAAGGGGA+AGG + Chr8:1335007-1335026 MsG0880041928.01.T01:CDS 45.0%
GGAGTAAATAGAGGACGAGT+AGG - Chr8:1332499-1332518 None:intergenic 45.0%
GGTTCCTGCAAATCAACTAG+TGG - Chr8:1333877-1333896 None:intergenic 45.0%
TCCCCTTCTCTTTGAATGGA+TGG - Chr8:1333826-1333845 None:intergenic 45.0%
TGCTGAGGCTCTTGAAAAGT+TGG + Chr8:1335963-1335982 MsG0880041928.01.T01:CDS 45.0%
TGTAGATACCAATGTGCCAG+AGG + Chr8:1335918-1335937 MsG0880041928.01.T01:CDS 45.0%
TTGGTCCCCTTCTCTTTGAA+TGG - Chr8:1333830-1333849 None:intergenic 45.0%
TTTGGTTGTGAGTTGCATGC+AGG + Chr8:1332369-1332388 MsG0880041928.01.T01:intron 45.0%
! ACATTTCCATAGGTTGGAGG+TGG - Chr8:1331830-1331849 None:intergenic 45.0%
! CATGTCTTGTTCTTGGTCCT+TGG - Chr8:1333118-1333137 None:intergenic 45.0%
! CCTGAAGAGCCTTTTCTAAG+TGG - Chr8:1331916-1331935 None:intergenic 45.0%
! GTGACCACATGTCTTGTTCT+TGG - Chr8:1333125-1333144 None:intergenic 45.0%
!! CAATTTGGTTGATGGAGGTG+TGG + Chr8:1334818-1334837 MsG0880041928.01.T01:CDS 45.0%
!! CTCTTGCTTTGGTGTTAGGT+GGG + Chr8:1333395-1333414 MsG0880041928.01.T01:intron 45.0%
!! TCTTGCTTTGGTGTTAGGTG+GGG + Chr8:1333396-1333415 MsG0880041928.01.T01:intron 45.0%
!! TTATAAATATTTCATTAAAT+CGG + Chr8:1335256-1335275 MsG0880041928.01.T01:intron 5.0%
AAAAAATTTGGGCCGGAGCC+CGG - Chr8:1332690-1332709 None:intergenic 50.0%
AAAATTGAGGCCCATGGCTG+GGG - Chr8:1333272-1333291 None:intergenic 50.0%
AGAGGACGAGTAGGGTCATT+TGG - Chr8:1332490-1332509 None:intergenic 50.0%
AGCCTCCGAATTCTTAGGGA+CGG + Chr8:1333574-1333593 MsG0880041928.01.T01:intron 50.0%
AGGTGTGGCTGCATGTAATC+CGG + Chr8:1334833-1334852 MsG0880041928.01.T01:CDS 50.0%
CAAAGAGAAGCAGCTTCGTC+TGG + Chr8:1335999-1336018 MsG0880041928.01.T01:CDS 50.0%
CCACCTAACACCAAAGCAAG+AGG - Chr8:1333397-1333416 None:intergenic 50.0%
GAGCCTCAGCATTTGTACCT+TGG - Chr8:1335954-1335973 None:intergenic 50.0%
GAGGACGAGTAGGGTCATTT+GGG - Chr8:1332489-1332508 None:intergenic 50.0%
GCAAACAGCTCAACAGAGCT+GGG + Chr8:1333242-1333261 MsG0880041928.01.T01:intron 50.0%
GGATCCATCCATGGATTCCA+TGG + Chr8:1335816-1335835 MsG0880041928.01.T01:CDS 50.0%
GTGGGGGTTCCTCATGTATA+CGG + Chr8:1333413-1333432 MsG0880041928.01.T01:intron 50.0%
TACCCGGGTCCAAAGTATGA+CGG + Chr8:1334457-1334476 MsG0880041928.01.T01:CDS 50.0%
TACCTTGCCAAAGTCTTCCC+AGG + Chr8:1335185-1335204 MsG0880041928.01.T01:CDS 50.0%
TCCCTAAGAATTCGGAGGCT+CGG - Chr8:1333574-1333593 None:intergenic 50.0%
TGCAAACAGCTCAACAGAGC+TGG + Chr8:1333241-1333260 MsG0880041928.01.T01:intron 50.0%
TGGAGGGCAGTAGTACTAGT+GGG - Chr8:1333304-1333323 None:intergenic 50.0%
TGGTTGGGATGCTACATACC+CGG + Chr8:1334441-1334460 MsG0880041928.01.T01:CDS 50.0%
TTGGAGGGCAGTAGTACTAG+TGG - Chr8:1333305-1333324 None:intergenic 50.0%
! GCAGCATTTTGGGCAACATC+TGG + Chr8:1335113-1335132 MsG0880041928.01.T01:CDS 50.0%
!! CCTCTTGCTTTGGTGTTAGG+TGG + Chr8:1333394-1333413 MsG0880041928.01.T01:intron 50.0%
!! CTGAATTAGTGACGGGCCAT+GGG - Chr8:1333975-1333994 None:intergenic 50.0%
!! CTTGCTTTGGTGTTAGGTGG+GGG + Chr8:1333397-1333416 MsG0880041928.01.T01:intron 50.0%
!! GCAACATCTGGTCTTGCAAC+TGG + Chr8:1335125-1335144 MsG0880041928.01.T01:CDS 50.0%
!! GGTCCTCTTGCTTTGGTGTT+AGG + Chr8:1333391-1333410 MsG0880041928.01.T01:intron 50.0%
AAAAATTTGGGCCGGAGCCC+GGG - Chr8:1332689-1332708 None:intergenic 55.0%
AAATTGAGGCCCATGGCTGG+GGG - Chr8:1333271-1333290 None:intergenic 55.0%
AGCCGAGCCTCCGAATTCTT+AGG + Chr8:1333569-1333588 MsG0880041928.01.T01:intron 55.0%
CAGGGCCGTCCCTAAGAATT+CGG - Chr8:1333582-1333601 None:intergenic 55.0%
CGAGTAGGGTCATTTGGGTG+AGG - Chr8:1332484-1332503 None:intergenic 55.0%
GAGCTACCACCTCCAACCTA+TGG + Chr8:1331821-1331840 MsG0880041928.01.T01:CDS 55.0%
GCCGAGCCTCCGAATTCTTA+GGG + Chr8:1333570-1333589 MsG0880041928.01.T01:intron 55.0%
GGTTGGGATGCTACATACCC+GGG + Chr8:1334442-1334461 MsG0880041928.01.T01:CDS 55.0%
TATAATCCAGGCCTGGCCCT+GGG + Chr8:1333216-1333235 MsG0880041928.01.T01:intron 55.0%
TCGCCGTCATACTTTGGACC+CGG - Chr8:1334463-1334482 None:intergenic 55.0%
TTATAATCCAGGCCTGGCCC+TGG + Chr8:1333215-1333234 MsG0880041928.01.T01:intron 55.0%
TTGAGCTGTTTGCACCCCCA+GGG - Chr8:1333235-1333254 None:intergenic 55.0%
TTGGAGGCCTGGGAAGACTT+TGG - Chr8:1335195-1335214 None:intergenic 55.0%
! ATAGCTGGGACTAGCACTGG+AGG + Chr8:1332433-1332452 MsG0880041928.01.T01:CDS 55.0%
! GTGATAGCTGGGACTAGCAC+TGG + Chr8:1332430-1332449 MsG0880041928.01.T01:CDS 55.0%
!! GCTGAATTAGTGACGGGCCA+TGG - Chr8:1333976-1333995 None:intergenic 55.0%
AGAATTCGGAGGCTCGGCTC+TGG - Chr8:1333568-1333587 None:intergenic 60.0%
ATAATCCAGGCCTGGCCCTG+GGG + Chr8:1333217-1333236 MsG0880041928.01.T01:intron 60.0%
CGCCGTCATACTTTGGACCC+GGG - Chr8:1334462-1334481 None:intergenic 60.0%
GAATTCGGAGGCTCGGCTCT+GGG - Chr8:1333567-1333586 None:intergenic 60.0%
GGCCGTCCCTAAGAATTCGG+AGG - Chr8:1333579-1333598 None:intergenic 60.0%
GGCCTGGGAAGACTTTGGCA+AGG - Chr8:1335190-1335209 None:intergenic 60.0%
GTTGAGCTGTTTGCACCCCC+AGG - Chr8:1333236-1333255 None:intergenic 60.0%
TAATCCAGGCCTGGCCCTGG+GGG + Chr8:1333218-1333237 MsG0880041928.01.T01:intron 65.0%
!! GCAAGGGCGGTTCTAAGGCC+CGG + Chr8:1332647-1332666 MsG0880041928.01.T01:intron 65.0%
CTGTTTGCACCCCCAGGGCC+AGG - Chr8:1333230-1333249 None:intergenic 70.0%
TTGAGGCCCATGGCTGGGGG+AGG - Chr8:1333268-1333287 None:intergenic 70.0%
!! GTTCTAAGGCCCGGCGAGCC+CGG + Chr8:1332656-1332675 MsG0880041928.01.T01:intron 70.0%
!! TTCTAAGGCCCGGCGAGCCC+GGG + Chr8:1332657-1332676 MsG0880041928.01.T01:intron 70.0%
AGCTGGGCCTCCCCCAGCCA+TGG + Chr8:1333258-1333277 MsG0880041928.01.T01:intron 75.0%
GCTGGGCCTCCCCCAGCCAT+GGG + Chr8:1333259-1333278 MsG0880041928.01.T01:intron 75.0%
! TGCACCCCCAGGGCCAGGCC+TGG - Chr8:1333225-1333244 None:intergenic 80.0%
! CCGGAGCCCGGGCGAGTGCC+CGG - Chr8:1332678-1332697 None:intergenic 85.0%
! CCGGGCACTCGCCCGGGCTC+CGG + Chr8:1332675-1332694 MsG0880041928.01.T01:intron 85.0%
! CGGAGCCCGGGCGAGTGCCC+GGG - Chr8:1332677-1332696 None:intergenic 85.0%
! GCGAGCCCGGGCACTCGCCC+GGG + Chr8:1332669-1332688 MsG0880041928.01.T01:intron 85.0%
! GGCGAGCCCGGGCACTCGCC+CGG + Chr8:1332668-1332687 MsG0880041928.01.T01:intron 85.0%
! GGCGAGTGCCCGGGCTCGCC+GGG - Chr8:1332668-1332687 None:intergenic 85.0%
! GGGCGAGTGCCCGGGCTCGC+CGG - Chr8:1332669-1332688 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr8 gene 1331714 1336311 1331714 ID=MsG0880041928.01;Name=MsG0880041928.01
Chr8 mRNA 1331714 1336311 1331714 ID=MsG0880041928.01.T01;Parent=MsG0880041928.01;Name=MsG0880041928.01.T01;_AED=0.46;_eAED=0.46;_QI=41|1|1|1|1|1|6|213|409
Chr8 exon 1331714 1331934 1331714 ID=MsG0880041928.01.T01:exon:899;Parent=MsG0880041928.01.T01
Chr8 exon 1332391 1332575 1332391 ID=MsG0880041928.01.T01:exon:900;Parent=MsG0880041928.01.T01
Chr8 exon 1334441 1334606 1334441 ID=MsG0880041928.01.T01:exon:901;Parent=MsG0880041928.01.T01
Chr8 exon 1334708 1334854 1334708 ID=MsG0880041928.01.T01:exon:902;Parent=MsG0880041928.01.T01
Chr8 exon 1334984 1335241 1334984 ID=MsG0880041928.01.T01:exon:903;Parent=MsG0880041928.01.T01
Chr8 exon 1335805 1336311 1335805 ID=MsG0880041928.01.T01:exon:904;Parent=MsG0880041928.01.T01
Chr8 five_prime_UTR 1331714 1331754 1331714 ID=MsG0880041928.01.T01:five_prime_utr;Parent=MsG0880041928.01.T01
Chr8 CDS 1331755 1331934 1331755 ID=MsG0880041928.01.T01:cds;Parent=MsG0880041928.01.T01
Chr8 CDS 1332391 1332575 1332391 ID=MsG0880041928.01.T01:cds;Parent=MsG0880041928.01.T01
Chr8 CDS 1334441 1334606 1334441 ID=MsG0880041928.01.T01:cds;Parent=MsG0880041928.01.T01
Chr8 CDS 1334708 1334854 1334708 ID=MsG0880041928.01.T01:cds;Parent=MsG0880041928.01.T01
Chr8 CDS 1334984 1335241 1334984 ID=MsG0880041928.01.T01:cds;Parent=MsG0880041928.01.T01
Chr8 CDS 1335805 1336098 1335805 ID=MsG0880041928.01.T01:cds;Parent=MsG0880041928.01.T01
Chr8 three_prime_UTR 1336099 1336311 1336099 ID=MsG0880041928.01.T01:three_prime_utr;Parent=MsG0880041928.01.T01
Gene Sequence

>MsG0880041928.01.T01

ATGGCTATTAATTTCCTTTTGTTTGTGTTCGTTTTTGCTAGTCAGTTTATTGCTGGATTCAACAAAGAGCTACCACCTCCAACCTATGGAAATGTAATCACCATTCTCAGTATTGATGGTGGTGGTATTAGAGGGATTATTCCAGCAATAATTCTTGACCACTTAGAAAAGGCTCTTCAGGCGAAAGATAAAGAAGCATCACTAGCAAATCATTTTGATGTGATAGCTGGGACTAGCACTGGAGGACTTGTCACTGCTTTGCTCACTACTCCTCACCCAAATGACCCTACTCGTCCTCTATTTACTCCTGCAGAAGTAATCAACTTCTACAATAAATATGGTCCTTCAATATTCAATGAAACTAGTGGTTGGGATGCTACATACCCGGGTCCAAAGTATGACGGCGAGTTCTTACATAATATATCACGTGAGTTATTGAAAGATACAAAACTGCATCAGACATTGACCAATGTAGTAATCCCAACATTTGACATCAAGAAGTTTCATCCAGTTATATTCTCAAATTTTAAGTTGGAGGAAGTTCCCAGCCAAGATGCAAAATTGTCAGATATATGCATTGGAACTTCAGCTGCACCAACTTATCTACCACCCTATTACTTTGCAAATGATGGTGCTGAATTCAATTTGGTTGATGGAGGTGTGGCTGCATGTAATCCGACGTTGGCTGCTGTGAGTGAAGTGATAAAACAGCAGAAGGGGAAGGATACCAAGATCTTGTTGTTGTCTATAGGATGTGGAGCTAAAATGGTTACAGGGTTTAATGCTGAAGATGCAATTCAATTCTCAGCAGCATTTTGGGCAACATCTGGTCTTGCAACTGGTAGTTATGATAATGCTGGTAAAGACATGACTGAATATTACCTTGCCAAAGTCTTCCCAGGCCTCCAATATTCTGAAAACTACCTTAGAATTCAGGAATATAACTTGGATCCATCCATGGATTCCATGGATAATGCTACACAAGCAAACTTGGAAAATCTTGCAAAGGTAGGAGTGAGCCTTCTGAGCAAACCAGTTTTGAAAATGAATGTAGATACCAATGTGCCAGAGGAAAAAATAAACCAAGGTACAAATGCTGAGGCTCTTGAAAAGTTGGCAGAGACTCTATACAAAGAGAAGCAGCTTCGTCTGGAAAAGAAATTGATCATGGAAAAATTGGGACGACCACTTCTTGAAACTATCACATTCCCTTTTGCTACTACAAGTTAA
Protein sequence

>MsG0880041928.01.T01

MAINFLLFVFVFASQFIAGFNKELPPPTYGNVITILSIDGGGIRGIIPAIILDHLEKALQAKDKEASLANHFDVIAGTSTGGLVTALLTTPHPNDPTRPLFTPAEVINFYNKYGPSIFNETSGWDATYPGPKYDGEFLHNISRELLKDTKLHQTLTNVVIPTFDIKKFHPVIFSNFKLEEVPSQDAKLSDICIGTSAAPTYLPPYYFANDGAEFNLVDGGVAACNPTLAAVSEVIKQQKGKDTKILLLSIGCGAKMVTGFNAEDAIQFSAAFWATSGLATGSYDNAGKDMTEYYLAKVFPGLQYSENYLRIQEYNLDPSMDSMDNATQANLENLAKVGVSLLSKPVLKMNVDTNVPEEKINQGTNAEALEKLAETLYKEKQLRLEKKLIMEKLGRPLLETITFPFATTS*