Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047899.01 | MsG0380017088.01 | 0.826783 | 2.244363e-54 | 2.125571e-51 |
| MsG0080048773.01 | MsG0380017088.01 | 0.847851 | 8.900076e-60 | 1.602891e-56 |
| MsG0080048780.01 | MsG0380017088.01 | 0.801506 | 8.721134e-49 | 4.172038e-46 |
| MsG0080048801.01 | MsG0380017088.01 | 0.803755 | 2.995981e-49 | 1.517882e-46 |
| MsG0080048876.01 | MsG0380017088.01 | 0.853970 | 1.680029e-61 | 3.694982e-58 |
| MsG0080049029.01 | MsG0380017088.01 | 0.821820 | 3.294585e-53 | 2.709505e-50 |
| MsG0080049039.01 | MsG0380017088.01 | 0.846763 | 1.770361e-59 | 3.079502e-56 |
| MsG0080049040.01 | MsG0380017088.01 | 0.878042 | 3.865743e-69 | 1.987971e-65 |
| MsG0080049063.01 | MsG0380017088.01 | 0.800907 | 1.156166e-48 | 5.448162e-46 |
| MsG0080049068.01 | MsG0380017088.01 | 0.860736 | 1.677908e-63 | 4.633740e-60 |
| MsG0080049078.01 | MsG0380017088.01 | 0.812866 | 3.416488e-51 | 2.196765e-48 |
| MsG0180000292.01 | MsG0380017088.01 | 0.809860 | 1.535864e-50 | 9.118650e-48 |
| MsG0180000670.01 | MsG0380017088.01 | 0.839928 | 1.181530e-57 | 1.656608e-54 |
| MsG0180000671.01 | MsG0380017088.01 | 0.855260 | 7.107427e-62 | 1.631172e-58 |
| MsG0180000677.01 | MsG0380017088.01 | 0.857944 | 1.155755e-62 | 2.901617e-59 |
| MsG0180000678.01 | MsG0380017088.01 | 0.833752 | 4.451045e-56 | 5.174321e-53 |
| MsG0180000878.01 | MsG0380017088.01 | 0.832227 | 1.066307e-55 | 1.184351e-52 |
| MsG0180000989.01 | MsG0380017088.01 | 0.804653 | 1.948235e-49 | 1.010100e-46 |
| MsG0180001085.01 | MsG0380017088.01 | 0.855253 | 7.142515e-62 | 1.638804e-58 |
| MsG0180001175.01 | MsG0380017088.01 | 0.856480 | 3.127377e-62 | 7.475710e-59 |
| MsG0180001270.01 | MsG0380017088.01 | 0.879778 | 9.435101e-70 | 5.182513e-66 |
| MsG0180001371.01 | MsG0380017088.01 | 0.810533 | 1.099694e-50 | 6.645334e-48 |
| MsG0180003353.01 | MsG0380017088.01 | 0.800274 | 1.556701e-48 | 7.218201e-46 |
| MsG0180003531.01 | MsG0380017088.01 | 0.818729 | 1.683577e-52 | 1.270364e-49 |
| MsG0180003633.01 | MsG0380017088.01 | 0.813084 | 3.060967e-51 | 1.979675e-48 |
| MsG0180003906.01 | MsG0380017088.01 | 0.811970 | 5.362882e-51 | 3.366879e-48 |
| MsG0180004103.01 | MsG0380017088.01 | 0.810850 | 9.387588e-51 | 5.721599e-48 |
| MsG0180004115.01 | MsG0380017088.01 | 0.836955 | 6.906386e-57 | 8.840142e-54 |
| MsG0180004192.01 | MsG0380017088.01 | 0.830290 | 3.191640e-55 | 3.348211e-52 |
| MsG0180004276.01 | MsG0380017088.01 | 0.834704 | 2.569875e-56 | 3.073634e-53 |
| MsG0180004448.01 | MsG0380017088.01 | 0.808418 | 3.127806e-50 | 1.787506e-47 |
| MsG0180004733.01 | MsG0380017088.01 | 0.811107 | 8.261810e-51 | 5.069578e-48 |
| MsG0180004735.01 | MsG0380017088.01 | 0.850723 | 1.412201e-60 | 2.791980e-57 |
| MsG0180004987.01 | MsG0380017088.01 | 0.800750 | 1.245029e-48 | 5.843090e-46 |
| MsG0180005039.01 | MsG0380017088.01 | 0.856880 | 2.385011e-62 | 5.776342e-59 |
| MsG0180005349.01 | MsG0380017088.01 | 0.834994 | 2.171596e-56 | 2.620425e-53 |
| MsG0180005485.01 | MsG0380017088.01 | 0.812710 | 3.697761e-51 | 2.367950e-48 |
| MsG0180005492.01 | MsG0380017088.01 | 0.816555 | 5.206091e-52 | 3.700668e-49 |
| MsG0180005750.01 | MsG0380017088.01 | 0.824064 | 9.884423e-54 | 8.662212e-51 |
| MsG0180005755.01 | MsG0380017088.01 | 0.845932 | 2.981939e-59 | 5.049743e-56 |
| MsG0180005807.01 | MsG0380017088.01 | 0.848103 | 7.583710e-60 | 1.376519e-56 |
| MsG0180005961.01 | MsG0380017088.01 | 0.849365 | 3.387837e-60 | 6.408002e-57 |
| MsG0180006136.01 | MsG0380017088.01 | 0.811283 | 7.563609e-51 | 4.662712e-48 |
| MsG0280010569.01 | MsG0380017088.01 | 0.874124 | 8.630363e-68 | 3.839110e-64 |
| MsG0280010611.01 | MsG0380017088.01 | 0.808441 | 3.092824e-50 | 1.768625e-47 |
| MsG0280010926.01 | MsG0380017088.01 | 0.858001 | 1.111757e-62 | 2.796309e-59 |
| MsG0280010975.01 | MsG0380017088.01 | 0.817951 | 2.525630e-52 | 1.865307e-49 |
| MsG0280011252.01 | MsG0380017088.01 | 0.843797 | 1.123236e-58 | 1.777276e-55 |
| MsG0280011411.01 | MsG0380017088.01 | 0.810463 | 1.138426e-50 | 6.866673e-48 |
| MsG0380011495.01 | MsG0380017088.01 | 0.822853 | 1.896390e-53 | 1.606178e-50 |
| MsG0380011652.01 | MsG0380017088.01 | 0.800828 | 1.200139e-48 | 5.643614e-46 |
| MsG0380012800.01 | MsG0380017088.01 | 0.810609 | 1.058584e-50 | 6.410130e-48 |
| MsG0380012801.01 | MsG0380017088.01 | 0.808474 | 3.042793e-50 | 1.741478e-47 |
| MsG0380013472.01 | MsG0380017088.01 | 0.835689 | 1.449770e-56 | 1.786379e-53 |
| MsG0380013955.01 | MsG0380017088.01 | 0.805060 | 1.602085e-49 | 8.393990e-47 |
| MsG0380013970.01 | MsG0380017088.01 | 0.826337 | 2.867555e-54 | 2.681582e-51 |
| MsG0380014007.01 | MsG0380017088.01 | 0.826057 | 3.343147e-54 | 3.101440e-51 |
| MsG0380014297.01 | MsG0380017088.01 | -0.840438 | 8.693100e-58 | 1.238273e-54 |
| MsG0380014584.01 | MsG0380017088.01 | 0.820517 | 6.578024e-53 | 5.215987e-50 |
| MsG0380014588.01 | MsG0380017088.01 | 0.822042 | 2.927257e-53 | 2.422408e-50 |
| MsG0380014940.01 | MsG0380017088.01 | 0.819895 | 9.132075e-53 | 7.117887e-50 |
| MsG0380015399.01 | MsG0380017088.01 | 0.848850 | 4.713000e-60 | 8.765746e-57 |
| MsG0380015547.01 | MsG0380017088.01 | 0.812722 | 3.674952e-51 | 2.354175e-48 |
| MsG0380015603.01 | MsG0380017088.01 | 0.866841 | 2.122761e-65 | 7.258346e-62 |
| MsG0380015645.01 | MsG0380017088.01 | 0.802294 | 6.006624e-49 | 2.931658e-46 |
| MsG0380015693.01 | MsG0380017088.01 | 0.858544 | 7.661993e-63 | 1.962295e-59 |
| MsG0380015742.01 | MsG0380017088.01 | 0.806717 | 7.181436e-50 | 3.925832e-47 |
| MsG0380015743.01 | MsG0380017088.01 | 0.806593 | 7.628157e-50 | 4.156659e-47 |
| MsG0380015817.01 | MsG0380017088.01 | 0.835560 | 1.562638e-56 | 1.917761e-53 |
| MsG0380015896.01 | MsG0380017088.01 | 0.822033 | 2.941376e-53 | 2.433526e-50 |
| MsG0380016057.01 | MsG0380017088.01 | 0.801645 | 8.165060e-49 | 3.919672e-46 |
| MsG0380016134.01 | MsG0380017088.01 | 0.810968 | 8.853139e-51 | 5.413044e-48 |
| MsG0380016137.01 | MsG0380017088.01 | 0.832388 | 9.723960e-56 | 1.085280e-52 |
| MsG0380016192.01 | MsG0380017088.01 | 0.900156 | 9.713818e-78 | 1.240229e-73 |
| MsG0380016194.01 | MsG0380017088.01 | 0.861848 | 7.687312e-64 | 2.205194e-60 |
| MsG0380016284.01 | MsG0380017088.01 | 0.845482 | 3.952283e-59 | 6.595782e-56 |
| MsG0380016425.01 | MsG0380017088.01 | -0.822671 | 2.090569e-53 | 1.761527e-50 |
| MsG0380016730.01 | MsG0380017088.01 | 0.806320 | 8.709788e-50 | 4.713217e-47 |
| MsG0380016836.01 | MsG0380017088.01 | 0.816330 | 5.847478e-52 | 4.131402e-49 |
| MsG0380016864.01 | MsG0380017088.01 | 0.859713 | 3.420019e-63 | 9.117773e-60 |
| MsG0380017087.01 | MsG0380017088.01 | 0.892667 | 1.285072e-74 | 1.186139e-70 |
| MsG0380017088.01 | MsG0380017336.01 | 0.842450 | 2.567202e-58 | 3.894301e-55 |
| MsG0380017088.01 | MsG0380017423.01 | 0.836647 | 8.278228e-57 | 1.049667e-53 |
| MsG0380017088.01 | MsG0380017703.01 | 0.908341 | 1.900926e-81 | 3.513504e-77 |
| MsG0380017088.01 | MsG0380017728.01 | 0.808478 | 3.036456e-50 | 1.738054e-47 |
| MsG0380017088.01 | MsG0380017838.01 | 0.832818 | 7.608712e-56 | 8.601036e-53 |
| MsG0380017088.01 | MsG0380018027.01 | 0.833320 | 5.708104e-56 | 6.550727e-53 |
| MsG0380017088.01 | MsG0380018037.01 | 0.817142 | 3.843235e-52 | 2.776266e-49 |
| MsG0380017088.01 | MsG0380018061.01 | 0.821654 | 3.598411e-53 | 2.945322e-50 |
| MsG0380017088.01 | MsG0380018069.01 | 0.857235 | 1.874306e-62 | 4.594660e-59 |
| MsG0380017088.01 | MsG0480018644.01 | 0.845198 | 4.716578e-59 | 7.799575e-56 |
| MsG0380017088.01 | MsG0480018848.01 | 0.835951 | 1.243933e-56 | 1.544663e-53 |
| MsG0380017088.01 | MsG0480019221.01 | 0.834542 | 2.822495e-56 | 3.360220e-53 |
| MsG0380017088.01 | MsG0480019283.01 | 0.846645 | 1.907044e-59 | 3.304837e-56 |
| MsG0380017088.01 | MsG0480019284.01 | 0.845894 | 3.055455e-59 | 5.167931e-56 |
| MsG0380017088.01 | MsG0480019285.01 | 0.804375 | 2.226564e-49 | 1.146187e-46 |
| MsG0380017088.01 | MsG0480019340.01 | 0.909628 | 4.613904e-82 | 9.062989e-78 |
| MsG0380017088.01 | MsG0480019751.01 | 0.863170 | 3.014246e-64 | 9.052371e-61 |
| MsG0380017088.01 | MsG0480019956.01 | 0.870592 | 1.299361e-66 | 5.082165e-63 |
| MsG0380017088.01 | MsG0480019971.01 | 0.844409 | 7.695768e-59 | 1.241250e-55 |
| MsG0380017088.01 | MsG0480020315.01 | 0.903472 | 3.348922e-79 | 4.965516e-75 |
| MsG0380017088.01 | MsG0480020408.01 | 0.911685 | 4.594030e-83 | 9.960605e-79 |
| MsG0380017088.01 | MsG0480020517.01 | 0.842036 | 3.304751e-58 | 4.947305e-55 |
| MsG0380017088.01 | MsG0480020690.01 | 0.868007 | 8.989194e-66 | 3.201507e-62 |
| MsG0380017088.01 | MsG0480020753.01 | 0.843255 | 1.568361e-58 | 2.439678e-55 |
| MsG0380017088.01 | MsG0480020783.01 | 0.901039 | 4.005759e-78 | 5.313205e-74 |
| MsG0380017088.01 | MsG0480020890.01 | 0.814089 | 1.840084e-51 | 1.223014e-48 |
| MsG0380017088.01 | MsG0480021060.01 | 0.808776 | 2.622356e-50 | 1.512626e-47 |
| MsG0380017088.01 | MsG0480021063.01 | -0.820852 | 5.509307e-53 | 4.409855e-50 |
| MsG0380017088.01 | MsG0480021168.01 | 0.803322 | 3.684923e-49 | 1.846177e-46 |
| MsG0380017088.01 | MsG0480021303.01 | 0.807629 | 4.603563e-50 | 2.576870e-47 |
| MsG0380017088.01 | MsG0480021754.01 | 0.818908 | 1.533302e-52 | 1.162836e-49 |
| MsG0380017088.01 | MsG0480021783.01 | 0.842625 | 2.305969e-58 | 3.516568e-55 |
| MsG0380017088.01 | MsG0480021803.01 | 0.831755 | 1.394268e-55 | 1.527509e-52 |
| MsG0380017088.01 | MsG0480021814.01 | 0.827900 | 1.211589e-54 | 1.185490e-51 |
| MsG0380017088.01 | MsG0480021817.01 | 0.835199 | 1.928253e-56 | 2.341186e-53 |
| MsG0380017088.01 | MsG0480022149.01 | 0.824868 | 6.390889e-54 | 5.731805e-51 |
| MsG0380017088.01 | MsG0480022200.01 | 0.818578 | 1.822219e-52 | 1.369236e-49 |
| MsG0380017088.01 | MsG0480022260.01 | 0.835816 | 1.346625e-56 | 1.665374e-53 |
| MsG0380017088.01 | MsG0480022294.01 | 0.801156 | 1.028366e-48 | 4.876456e-46 |
| MsG0380017088.01 | MsG0480022401.01 | 0.810885 | 9.229331e-51 | 5.630358e-48 |
| MsG0380017088.01 | MsG0480022537.01 | 0.839301 | 1.719733e-57 | 2.364910e-54 |
| MsG0380017088.01 | MsG0480022646.01 | 0.867169 | 1.668092e-65 | 5.767456e-62 |
| MsG0380017088.01 | MsG0480022647.01 | 0.873033 | 2.011935e-67 | 8.603456e-64 |
| MsG0380017088.01 | MsG0480023054.01 | 0.840441 | 8.677893e-58 | 1.236229e-54 |
| MsG0380017088.01 | MsG0480023098.01 | 0.815109 | 1.093731e-51 | 7.472790e-49 |
| MsG0380017088.01 | MsG0480023216.01 | 0.836404 | 9.547119e-57 | 1.201876e-53 |
| MsG0380017088.01 | MsG0480023314.01 | 0.879137 | 1.592202e-69 | 8.534372e-66 |
| MsG0380017088.01 | MsG0480023367.01 | 0.844788 | 6.084179e-59 | 9.932170e-56 |
| MsG0380017088.01 | MsG0480023389.01 | 0.862101 | 6.430608e-64 | 1.861076e-60 |
| MsG0380017088.01 | MsG0480023444.01 | 0.807300 | 5.407096e-50 | 3.000959e-47 |
| MsG0380017088.01 | MsG0480023553.01 | 0.813562 | 2.403926e-51 | 1.575123e-48 |
| MsG0380017088.01 | MsG0480023565.01 | 0.813744 | 2.191533e-51 | 1.443062e-48 |
| MsG0380017088.01 | MsG0480023590.01 | 0.839141 | 1.892472e-57 | 2.589547e-54 |
| MsG0380017088.01 | MsG0480023656.01 | 0.806590 | 7.640472e-50 | 4.163082e-47 |
| MsG0380017088.01 | MsG0480023661.01 | 0.829158 | 6.018144e-55 | 6.109172e-52 |
| MsG0380017088.01 | MsG0480023845.01 | 0.805250 | 1.461706e-49 | 7.695592e-47 |
| MsG0380017088.01 | MsG0480023990.01 | 0.844878 | 5.754178e-59 | 9.418811e-56 |
| MsG0380017088.01 | MsG0480023991.01 | 0.821623 | 3.660079e-53 | 2.993012e-50 |
| MsG0380017088.01 | MsG0480023992.01 | 0.846800 | 1.729580e-59 | 3.012125e-56 |
| MsG0380017088.01 | MsG0580024679.01 | 0.826939 | 2.060357e-54 | 1.960295e-51 |
| MsG0380017088.01 | MsG0580024873.01 | 0.869069 | 4.082063e-66 | 1.511293e-62 |
| MsG0380017088.01 | MsG0580025119.01 | 0.806043 | 9.964233e-50 | 5.354126e-47 |
| MsG0380017088.01 | MsG0580025256.01 | 0.824477 | 7.903718e-54 | 7.008281e-51 |
| MsG0380017088.01 | MsG0580025366.01 | 0.804768 | 1.843861e-49 | 9.588610e-47 |
| MsG0380017088.01 | MsG0580025411.01 | 0.816571 | 5.164524e-52 | 3.672790e-49 |
| MsG0380017088.01 | MsG0580025502.01 | 0.853799 | 1.881537e-61 | 4.114556e-58 |
| MsG0380017088.01 | MsG0580025607.01 | 0.856953 | 2.269682e-62 | 5.510568e-59 |
| MsG0380017088.01 | MsG0580025668.01 | 0.887161 | 1.819522e-72 | 1.337935e-68 |
| MsG0380017088.01 | MsG0580025828.01 | 0.889922 | 1.568283e-73 | 1.290846e-69 |
| MsG0380017088.01 | MsG0580025906.01 | 0.808546 | 2.937488e-50 | 1.684320e-47 |
| MsG0380017088.01 | MsG0580025971.01 | 0.812484 | 4.142822e-51 | 2.637377e-48 |
| MsG0380017088.01 | MsG0580027394.01 | 0.826545 | 2.557482e-54 | 2.405709e-51 |
| MsG0380017088.01 | MsG0580027725.01 | 0.816507 | 5.336490e-52 | 3.788344e-49 |
| MsG0380017088.01 | MsG0580027763.01 | 0.865785 | 4.588220e-65 | 1.511320e-61 |
| MsG0380017088.01 | MsG0580027887.01 | 0.802727 | 4.891596e-49 | 2.413954e-46 |
| MsG0380017088.01 | MsG0580028024.01 | 0.817770 | 2.775571e-52 | 2.039871e-49 |
| MsG0380017088.01 | MsG0580028059.01 | 0.824642 | 7.227845e-54 | 6.440473e-51 |
| MsG0380017088.01 | MsG0580028111.01 | 0.812285 | 4.579626e-51 | 2.899970e-48 |
| MsG0380017088.01 | MsG0580028306.01 | 0.806339 | 8.631627e-50 | 4.673116e-47 |
| MsG0380017088.01 | MsG0580028335.01 | 0.879122 | 1.612493e-69 | 8.638160e-66 |
| MsG0380017088.01 | MsG0580028723.01 | 0.817939 | 2.541925e-52 | 1.876732e-49 |
| MsG0380017088.01 | MsG0580029325.01 | 0.847419 | 1.170172e-59 | 2.078610e-56 |
| MsG0380017088.01 | MsG0580029354.01 | 0.833610 | 4.831200e-56 | 5.592133e-53 |
| MsG0380017088.01 | MsG0580029414.01 | 0.815263 | 1.011050e-51 | 6.937205e-49 |
| MsG0380017088.01 | MsG0580029529.01 | 0.857421 | 1.651468e-62 | 4.073365e-59 |
| MsG0380017088.01 | MsG0580029605.01 | 0.802745 | 4.850195e-49 | 2.394549e-46 |
| MsG0380017088.01 | MsG0580029753.01 | 0.813628 | 2.324654e-51 | 1.525962e-48 |
| MsG0380017088.01 | MsG0680030627.01 | 0.821535 | 3.835092e-53 | 3.128440e-50 |
| MsG0380017088.01 | MsG0680030784.01 | 0.828302 | 9.698224e-55 | 9.600913e-52 |
| MsG0380017088.01 | MsG0680030908.01 | 0.823723 | 1.187903e-53 | 1.031257e-50 |
| MsG0380017088.01 | MsG0680030957.01 | 0.812767 | 3.591609e-51 | 2.303423e-48 |
| MsG0380017088.01 | MsG0680031010.01 | 0.824162 | 9.370859e-54 | 8.235453e-51 |
| MsG0380017088.01 | MsG0680031115.01 | 0.821543 | 3.818419e-53 | 3.115665e-50 |
| MsG0380017088.01 | MsG0680031469.01 | 0.861821 | 7.837097e-64 | 2.245954e-60 |
| MsG0380017088.01 | MsG0680031689.01 | 0.824210 | 9.131533e-54 | 8.035887e-51 |
| MsG0380017088.01 | MsG0680031716.01 | -0.816754 | 4.698827e-52 | 3.358424e-49 |
| MsG0380017088.01 | MsG0680032057.01 | 0.853615 | 2.124915e-61 | 4.618814e-58 |
| MsG0380017088.01 | MsG0680032238.01 | 0.816360 | 5.757373e-52 | 4.070901e-49 |
| MsG0380017088.01 | MsG0680032515.01 | 0.807010 | 6.227531e-50 | 3.430248e-47 |
| MsG0380017088.01 | MsG0680032651.01 | 0.876409 | 1.428917e-68 | 6.920305e-65 |
| MsG0380017088.01 | MsG0680033377.01 | 0.852465 | 4.534439e-61 | 9.482846e-58 |
| MsG0380017088.01 | MsG0680034064.01 | 0.892921 | 1.016117e-74 | 9.477473e-71 |
| MsG0380017088.01 | MsG0680034750.01 | 0.817361 | 3.431683e-52 | 2.493863e-49 |
| MsG0380017088.01 | MsG0680035731.01 | 0.844784 | 6.100195e-59 | 9.956593e-56 |
| MsG0380017088.01 | MsG0680035791.01 | 0.825426 | 4.717945e-54 | 4.298625e-51 |
| MsG0380017088.01 | MsG0780035992.01 | 0.874086 | 8.891139e-68 | 3.949221e-64 |
| MsG0380017088.01 | MsG0780036243.01 | 0.833566 | 4.955287e-56 | 5.728478e-53 |
| MsG0380017088.01 | MsG0780036387.01 | 0.820347 | 7.196558e-53 | 5.679949e-50 |
| MsG0380017088.01 | MsG0780036443.01 | 0.809425 | 1.904307e-50 | 1.117714e-47 |
| MsG0380017088.01 | MsG0780036711.01 | 0.812549 | 4.008253e-51 | 2.556101e-48 |
| MsG0380017088.01 | MsG0780036715.01 | 0.841467 | 4.667874e-58 | 6.865674e-55 |
| MsG0380017088.01 | MsG0780037184.01 | 0.810306 | 1.230740e-50 | 7.392708e-48 |
| MsG0380017088.01 | MsG0780037395.01 | 0.827390 | 1.606547e-54 | 1.549008e-51 |
| MsG0380017088.01 | MsG0780037662.01 | 0.826237 | 3.028251e-54 | 2.823769e-51 |
| MsG0380017088.01 | MsG0780037705.01 | 0.800514 | 1.390489e-48 | 6.487025e-46 |
| MsG0380017088.01 | MsG0780038351.01 | 0.815258 | 1.013586e-51 | 6.953525e-49 |
| MsG0380017088.01 | MsG0780038571.01 | 0.817551 | 3.109060e-52 | 2.271210e-49 |
| MsG0380017088.01 | MsG0780038616.01 | 0.830598 | 2.683869e-55 | 2.840918e-52 |
| MsG0380017088.01 | MsG0780038784.01 | 0.869506 | 2.942016e-66 | 1.107050e-62 |
| MsG0380017088.01 | MsG0780038807.01 | 0.825712 | 4.037228e-54 | 3.708719e-51 |
| MsG0380017088.01 | MsG0780038846.01 | 0.820022 | 8.543190e-53 | 6.682892e-50 |
| MsG0380017088.01 | MsG0780038948.01 | 0.803218 | 3.871551e-49 | 1.934564e-46 |
| MsG0380017088.01 | MsG0780039186.01 | 0.808431 | 3.107769e-50 | 1.776676e-47 |
| MsG0380017088.01 | MsG0780039675.01 | 0.898748 | 3.914366e-77 | 4.691798e-73 |
| MsG0380017088.01 | MsG0780039746.01 | 0.838840 | 2.264282e-57 | 3.070101e-54 |
| MsG0380017088.01 | MsG0780039853.01 | 0.815020 | 1.145060e-51 | 7.804837e-49 |
| MsG0380017088.01 | MsG0780039975.01 | 0.847462 | 1.138692e-59 | 2.025645e-56 |
| MsG0380017088.01 | MsG0780040061.01 | 0.831509 | 1.603819e-55 | 1.744113e-52 |
| MsG0380017088.01 | MsG0780040284.01 | 0.878927 | 1.889406e-69 | 1.004717e-65 |
| MsG0380017088.01 | MsG0780040331.01 | 0.802893 | 4.519105e-49 | 2.239522e-46 |
| MsG0380017088.01 | MsG0780041138.01 | 0.812014 | 5.245504e-51 | 3.297097e-48 |
| MsG0380017088.01 | MsG0780041174.01 | 0.812044 | 5.168121e-51 | 3.250919e-48 |
| MsG0380017088.01 | MsG0780041480.01 | 0.813886 | 2.040113e-51 | 1.348557e-48 |
| MsG0380017088.01 | MsG0780041791.01 | 0.800048 | 1.729806e-48 | 7.975110e-46 |
| MsG0380017088.01 | MsG0880041928.01 | 0.803339 | 3.653896e-49 | 1.831452e-46 |
| MsG0380017088.01 | MsG0880041947.01 | 0.809806 | 1.577368e-50 | 9.352184e-48 |
| MsG0380017088.01 | MsG0880042475.01 | 0.835079 | 2.067546e-56 | 2.500951e-53 |
| MsG0380017088.01 | MsG0880042555.01 | 0.858330 | 8.871399e-63 | 2.255895e-59 |
| MsG0380017088.01 | MsG0880042890.01 | 0.885159 | 1.033761e-71 | 7.019019e-68 |
| MsG0380017088.01 | MsG0880042894.01 | 0.815977 | 7.009265e-52 | 4.904461e-49 |
| MsG0380017088.01 | MsG0880042931.01 | 0.832721 | 8.041448e-56 | 9.064662e-53 |
| MsG0380017088.01 | MsG0880043174.01 | 0.823933 | 1.060759e-53 | 9.262410e-51 |
| MsG0380017088.01 | MsG0880043277.01 | 0.803603 | 3.221454e-49 | 1.625797e-46 |
| MsG0380017088.01 | MsG0880043290.01 | 0.831734 | 1.410830e-55 | 1.544725e-52 |
| MsG0380017088.01 | MsG0880043814.01 | 0.841516 | 4.531530e-58 | 6.674893e-55 |
| MsG0380017088.01 | MsG0880044392.01 | 0.883966 | 2.865823e-71 | 1.856198e-67 |
| MsG0380017088.01 | MsG0880044414.01 | 0.860306 | 2.264353e-63 | 6.161160e-60 |
| MsG0380017088.01 | MsG0880044487.01 | 0.817251 | 3.633743e-52 | 2.632673e-49 |
| MsG0380017088.01 | MsG0880044884.01 | 0.812921 | 3.323147e-51 | 2.139901e-48 |
| MsG0380017088.01 | MsG0880045101.01 | 0.872125 | 4.043550e-67 | 1.672243e-63 |
| MsG0380017088.01 | MsG0880045158.01 | 0.806370 | 8.501912e-50 | 4.606605e-47 |
| MsG0380017088.01 | MsG0880045361.01 | 0.813449 | 2.545453e-51 | 1.662881e-48 |
| MsG0380017088.01 | MsG0880045558.01 | 0.830021 | 3.711864e-55 | 3.863816e-52 |
| MsG0380017088.01 | MsG0880045668.01 | 0.811211 | 7.840643e-51 | 4.824590e-48 |
| MsG0380017088.01 | MsG0880046054.01 | 0.820240 | 7.613518e-53 | 5.991204e-50 |
| MsG0380017088.01 | MsG0880046255.01 | 0.849872 | 2.446514e-60 | 4.704213e-57 |
| MsG0380017088.01 | MsG0880046267.01 | 0.833471 | 5.232920e-56 | 6.032229e-53 |
| MsG0380017088.01 | MsG0880046382.01 | 0.854645 | 1.072407e-61 | 2.411546e-58 |
| MsG0380017088.01 | MsG0880046764.01 | 0.816837 | 4.500872e-52 | 3.224298e-49 |
| MsG0380017088.01 | MsG0880046765.01 | 0.846858 | 1.668068e-59 | 2.910121e-56 |
| MsG0380017088.01 | MsG0880046789.01 | 0.844085 | 9.403815e-59 | 1.501501e-55 |
| MsG0380017088.01 | MsG0880046791.01 | 0.807615 | 4.635847e-50 | 2.593882e-47 |
| MsG0380017088.01 | MsG0880046867.01 | 0.833975 | 3.915876e-56 | 4.583485e-53 |
| MsG0380017088.01 | MsG0880047156.01 | 0.808594 | 2.869136e-50 | 1.647130e-47 |
| MsG0380017088.01 | MsG0880047168.01 | 0.843007 | 1.825727e-58 | 2.817558e-55 |
| MsG0380017088.01 | MsG0880047422.01 | -0.831346 | 1.758229e-55 | 1.902804e-52 |
| MsG0380017088.01 | MsG0880047442.01 | 0.808810 | 2.579165e-50 | 1.489077e-47 |
| MsG0380017088.01 | MsG0880047451.01 | 0.828754 | 7.541726e-55 | 7.564575e-52 |
| MsG0380017088.01 | MsG0880047587.01 | 0.843479 | 1.366163e-58 | 2.140215e-55 |
| MsG0380017088.01 | MsG0880047614.01 | 0.811937 | 5.453477e-51 | 3.420524e-48 |
| MsG0380017088.01 | MsG0880047656.01 | 0.872958 | 2.130465e-67 | 9.084602e-64 |
| MsG0380017088.01 | MsG0880047703.01 | 0.803432 | 3.496377e-49 | 1.756724e-46 |
| MsG0280006805.01 | MsG0380017088.01 | 0.836352 | 9.839213e-57 | 1.236895e-53 |
| MsG0280006996.01 | MsG0380017088.01 | 0.804257 | 2.356450e-49 | 1.209288e-46 |
| MsG0280007075.01 | MsG0380017088.01 | 0.874227 | 7.964036e-68 | 3.556736e-64 |
| MsG0280007502.01 | MsG0380017088.01 | 0.827805 | 1.276875e-54 | 1.245831e-51 |
| MsG0280007831.01 | MsG0380017088.01 | 0.803637 | 3.169519e-49 | 1.600939e-46 |
| MsG0280007976.01 | MsG0380017088.01 | 0.805528 | 1.278269e-49 | 6.778173e-47 |
| MsG0280008388.01 | MsG0380017088.01 | 0.845957 | 2.937341e-59 | 4.978075e-56 |
| MsG0280008394.01 | MsG0380017088.01 | 0.837144 | 6.181737e-57 | 7.957544e-54 |
| MsG0280008451.01 | MsG0380017088.01 | 0.829963 | 3.834938e-55 | 3.985441e-52 |
| MsG0280008591.01 | MsG0380017088.01 | 0.848900 | 4.562893e-60 | 8.500741e-57 |
| MsG0280008835.01 | MsG0380017088.01 | 0.809463 | 1.868575e-50 | 1.097827e-47 |
| MsG0280008988.01 | MsG0380017088.01 | 0.841418 | 4.808598e-58 | 7.061764e-55 |
| MsG0280008994.01 | MsG0380017088.01 | 0.834838 | 2.377338e-56 | 2.855300e-53 |
| MsG0280009756.01 | MsG0380017088.01 | 0.804508 | 2.088637e-49 | 1.078807e-46 |
| MsG0280010353.01 | MsG0380017088.01 | 0.821042 | 4.982311e-53 | 4.009441e-50 |
| MsG0280010376.01 | MsG0380017088.01 | 0.823906 | 1.076053e-53 | 9.388898e-51 |
| MsG0280010503.01 | MsG0380017088.01 | 0.859112 | 5.180924e-63 | 1.352804e-59 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 28 sgRNAs with CRISPR-Local
Find 35 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACATGCCACCGGCGTAAC+AGG | 0.280829 | 3:+91785953 | None:intergenic |
| TTGTATCTGACCGTTCCTGC+TGG | 0.450197 | 3:+91785833 | None:intergenic |
| AAATGGGTTCCCTGTTACGC+CGG | 0.483195 | 3:-91785963 | MsG0380017088.01.T01:CDS |
| CGCTTGGAAACTCAGGAGTT+AGG | 0.485005 | 3:-91785925 | MsG0380017088.01.T01:CDS |
| TTCCAGTGTTCCTTCTTCTC+CGG | 0.499051 | 3:+91785739 | None:intergenic |
| ACAGGCGGTGGTGTCAAAAG+TGG | 0.503495 | 3:-91785857 | MsG0380017088.01.T01:CDS |
| GGTGGAATCGGTTCAGCGGA+CGG | 0.518412 | 3:-91785890 | MsG0380017088.01.T01:CDS |
| GGTGTCAAAAGTGGGCCAGC+AGG | 0.527350 | 3:-91785848 | MsG0380017088.01.T01:CDS |
| AGAAGAAGGAACACTGGAAG+CGG | 0.543572 | 3:-91785735 | MsG0380017088.01.T02:CDS |
| CAAAAGTGGGCCAGCAGGAA+CGG | 0.546267 | 3:-91785843 | MsG0380017088.01.T01:CDS |
| GGAGGAGCAGCCACAGGCGG+TGG | 0.554790 | 3:-91785869 | MsG0380017088.01.T01:CDS |
| GTGGCATGTTACGACTCGCT+TGG | 0.557648 | 3:-91785941 | MsG0380017088.01.T01:CDS |
| AAGAATCACGCCGTCAGCAT+AGG | 0.558884 | 3:-91785800 | MsG0380017088.01.T02:CDS |
| GCGGACGGAGGAGCAGCCAC+AGG | 0.565208 | 3:-91785875 | MsG0380017088.01.T01:CDS |
| TGGGTTCCCTGTTACGCCGG+TGG | 0.568935 | 3:-91785960 | MsG0380017088.01.T01:CDS |
| TACGACTCGCTTGGAAACTC+AGG | 0.569322 | 3:-91785932 | MsG0380017088.01.T01:CDS |
| AATCACGCCGTCAGCATAGG+TGG | 0.574956 | 3:-91785797 | MsG0380017088.01.T02:CDS |
| ATAGGTGGTCACGCCGTGGA+TGG | 0.576462 | 3:-91785782 | MsG0380017088.01.T02:CDS |
| CAGGCGGTGGTGTCAAAAGT+GGG | 0.580393 | 3:-91785856 | MsG0380017088.01.T01:CDS |
| AACATGCCACCGGCGTAACA+GGG | 0.586523 | 3:+91785954 | None:intergenic |
| AGCGAGTCGTAACATGCCAC+CGG | 0.591718 | 3:+91785944 | None:intergenic |
| GACGGAGGAGCAGCCACAGG+CGG | 0.606719 | 3:-91785872 | MsG0380017088.01.T01:CDS |
| GGCGTGACCACCTATGCTGA+CGG | 0.619665 | 3:+91785790 | None:intergenic |
| CAGCATAGGTGGTCACGCCG+TGG | 0.632841 | 3:-91785786 | MsG0380017088.01.T02:CDS |
| TGGCGGTGGAATCGGTTCAG+CGG | 0.633285 | 3:-91785894 | MsG0380017088.01.T01:CDS |
| TGCCGGAGAAGAAGGAACAC+TGG | 0.644421 | 3:-91785741 | MsG0380017088.01.T02:CDS |
| GGAATCGGTTCAGCGGACGG+AGG | 0.678169 | 3:-91785887 | MsG0380017088.01.T01:CDS |
| AAACTCGCAACATCCATCCA+CGG | 0.687116 | 3:+91785769 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TCAGGAGTTAGGTCCAAAAA+TGG | - | Chr3:91785763-91785782 | MsG0380017088.01.T02:CDS | 40.0% | |
| AAACTCGCAACATCCATCCA+CGG | + | Chr3:91785911-91785930 | None:intergenic | 45.0% | |
| AGAAGAAGGAACACTGGAAG+CGG | - | Chr3:91785942-91785961 | MsG0380017088.01.T01:CDS | 45.0% | |
| GGAGTTAGGTCCAAAAATGG+CGG | - | Chr3:91785766-91785785 | MsG0380017088.01.T02:CDS | 45.0% | |
| TCCAAAAATGGCGGTGGAAT+CGG | - | Chr3:91785775-91785794 | MsG0380017088.01.T02:CDS | 45.0% | |
| TTCCAGTGTTCCTTCTTCTC+CGG | + | Chr3:91785941-91785960 | None:intergenic | 45.0% | |
| !!! | TGTTGCGAGTTTTTAGCTGC+CGG | - | Chr3:91785919-91785938 | MsG0380017088.01.T01:CDS | 45.0% |
| !!! | TTTTTAGCTGCCGGAGAAGA+AGG | - | Chr3:91785928-91785947 | MsG0380017088.01.T01:CDS | 45.0% |
| AAGAATCACGCCGTCAGCAT+AGG | - | Chr3:91785877-91785896 | MsG0380017088.01.T01:CDS | 50.0% | |
| CGCTTGGAAACTCAGGAGTT+AGG | - | Chr3:91785752-91785771 | MsG0380017088.01.T02:CDS | 50.0% | |
| GTTAGGTCCAAAAATGGCGG+TGG | - | Chr3:91785769-91785788 | MsG0380017088.01.T02:CDS | 50.0% | |
| TACGACTCGCTTGGAAACTC+AGG | - | Chr3:91785745-91785764 | MsG0380017088.01.T02:CDS | 50.0% | |
| TTGTATCTGACCGTTCCTGC+TGG | + | Chr3:91785847-91785866 | None:intergenic | 50.0% | |
| !! | ACCGATTCCACCGCCATTTT+TGG | + | Chr3:91785779-91785798 | None:intergenic | 50.0% |
| AACATGCCACCGGCGTAACA+GGG | + | Chr3:91785726-91785745 | None:intergenic | 55.0% | |
| AATCACGCCGTCAGCATAGG+TGG | - | Chr3:91785880-91785899 | MsG0380017088.01.T01:CDS | 55.0% | |
| AGCGAGTCGTAACATGCCAC+CGG | + | Chr3:91785736-91785755 | None:intergenic | 55.0% | |
| CAAAAGTGGGCCAGCAGGAA+CGG | - | Chr3:91785834-91785853 | MsG0380017088.01.T01:CDS | 55.0% | |
| GTGGCATGTTACGACTCGCT+TGG | - | Chr3:91785736-91785755 | MsG0380017088.01.T02:CDS | 55.0% | |
| TAACATGCCACCGGCGTAAC+AGG | + | Chr3:91785727-91785746 | None:intergenic | 55.0% | |
| TGCCGGAGAAGAAGGAACAC+TGG | - | Chr3:91785936-91785955 | MsG0380017088.01.T01:CDS | 55.0% | |
| ! | ACAGGCGGTGGTGTCAAAAG+TGG | - | Chr3:91785820-91785839 | MsG0380017088.01.T01:CDS | 55.0% |
| ! | ACTTTTGACACCACCGCCTG+TGG | + | Chr3:91785821-91785840 | None:intergenic | 55.0% |
| ! | CAGGCGGTGGTGTCAAAAGT+GGG | - | Chr3:91785821-91785840 | MsG0380017088.01.T01:CDS | 55.0% |
| ATAGGTGGTCACGCCGTGGA+TGG | - | Chr3:91785895-91785914 | MsG0380017088.01.T01:CDS | 60.0% | |
| GGCGTGACCACCTATGCTGA+CGG | + | Chr3:91785890-91785909 | None:intergenic | 60.0% | |
| GGTGTCAAAAGTGGGCCAGC+AGG | - | Chr3:91785829-91785848 | MsG0380017088.01.T01:CDS | 60.0% | |
| ! | GGTGGAATCGGTTCAGCGGA+CGG | - | Chr3:91785787-91785806 | MsG0380017088.01.T02:CDS | 60.0% |
| ! | TGGCGGTGGAATCGGTTCAG+CGG | - | Chr3:91785783-91785802 | MsG0380017088.01.T02:CDS | 60.0% |
| CAGCATAGGTGGTCACGCCG+TGG | - | Chr3:91785891-91785910 | MsG0380017088.01.T01:CDS | 65.0% | |
| TGGGTTCCCTGTTACGCCGG+TGG | - | Chr3:91785717-91785736 | MsG0380017088.01.T02:CDS | 65.0% | |
| ! | GGAATCGGTTCAGCGGACGG+AGG | - | Chr3:91785790-91785809 | MsG0380017088.01.T02:CDS | 65.0% |
| GACGGAGGAGCAGCCACAGG+CGG | - | Chr3:91785805-91785824 | MsG0380017088.01.T01:CDS | 70.0% | |
| GCGGACGGAGGAGCAGCCAC+AGG | - | Chr3:91785802-91785821 | MsG0380017088.01.T01:CDS | 75.0% | |
| GGAGGAGCAGCCACAGGCGG+TGG | - | Chr3:91785808-91785827 | MsG0380017088.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 91785716 | 91785983 | 91785716 | ID=MsG0380017088.01;Name=MsG0380017088.01 |
| Chr3 | mRNA | 91785801 | 91785983 | 91785801 | ID=MsG0380017088.01.T01;Parent=MsG0380017088.01;Name=MsG0380017088.01.T01;_AED=0.46;_eAED=0.46;_QI=0|-1|0|1|-1|0|1|0|60 |
| Chr3 | exon | 91785801 | 91785983 | 91785801 | ID=MsG0380017088.01.T01:exon:31028;Parent=MsG0380017088.01.T01 |
| Chr3 | CDS | 91785801 | 91785983 | 91785801 | ID=MsG0380017088.01.T01:cds;Parent=MsG0380017088.01.T01 |
| Chr3 | mRNA | 91785716 | 91785829 | 91785716 | ID=MsG0380017088.01.T02;Parent=MsG0380017088.01;Name=MsG0380017088.01.T02;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|0|1|0|37 |
| Chr3 | exon | 91785716 | 91785829 | 91785716 | ID=MsG0380017088.01.T02:exon:31029;Parent=MsG0380017088.01.T02 |
| Chr3 | CDS | 91785716 | 91785829 | 91785716 | ID=MsG0380017088.01.T02:cds;Parent=MsG0380017088.01.T02 |
| Gene Sequence |
| Protein sequence |
