AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042240.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042240.01.T01 MTR_4g094378 81.139 281 12 2 1 243 246 523 8.48e-151 450
MsG0880042240.01.T01 MTR_8g008930 91.818 110 9 0 286 395 1 110 3.51e-64 213
MsG0880042240.01.T01 MTR_8g008930 85.542 83 12 0 417 499 283 365 1.27e-40 150
MsG0880042240.01.T01 MTR_8g009090 91.818 110 9 0 286 395 1 110 5.80e-64 212
MsG0880042240.01.T01 MTR_8g009090 84.337 83 13 0 417 499 282 364 7.16e-41 150
MsG0880042240.01.T01 MTR_8g009170 90.000 110 11 0 286 395 1 110 2.11e-62 206
MsG0880042240.01.T01 MTR_8g009160 88.182 110 13 0 286 395 1 110 5.03e-62 207
MsG0880042240.01.T01 MTR_8g009160 95.181 83 4 0 417 499 282 364 4.91e-46 164
MsG0880042240.01.T01 MTR_8g009170 90.000 110 11 0 286 395 1 110 8.01e-62 206
MsG0880042240.01.T01 MTR_8g009170 91.667 84 6 1 417 499 283 366 6.42e-44 159
MsG0880042240.01.T01 MTR_8g028435 72.028 143 34 1 286 428 1 137 2.50e-61 205
MsG0880042240.01.T01 MTR_8g028435 85.542 83 12 0 417 499 282 364 5.49e-40 148
MsG0880042240.01.T01 MTR_8g009110 87.273 110 14 0 286 395 1 110 3.59e-60 202
MsG0880042240.01.T01 MTR_8g009110 80.723 83 16 0 417 499 283 365 1.11e-39 147
MsG0880042240.01.T01 MTR_8g009120 84.545 110 17 0 286 395 1 110 5.91e-57 193
MsG0880042240.01.T01 MTR_8g009120 80.519 77 15 0 423 499 277 353 2.51e-34 132
MsG0880042240.01.T01 MTR_8g009150 83.636 110 18 0 286 395 1 110 6.83e-57 193
MsG0880042240.01.T01 MTR_8g009150 78.313 83 18 0 417 499 263 345 7.50e-37 139
MsG0880042240.01.T01 MTR_4g117880 75.455 110 27 0 286 395 1 110 4.16e-51 178
MsG0880042240.01.T01 MTR_4g117880 71.429 84 23 1 417 499 283 366 3.23e-30 121
MsG0880042240.01.T01 MTR_1g007420 39.310 290 117 8 2 243 340 618 9.14e-47 174
MsG0880042240.01.T01 MTR_3g110690 37.024 289 127 5 1 243 210 489 4.52e-46 172
MsG0880042240.01.T01 MTR_8g009180 90.361 83 8 0 417 499 212 294 2.06e-43 155
MsG0880042240.01.T01 MTR_2g069190 74.699 83 21 0 417 499 289 371 6.23e-36 137
MsG0880042240.01.T01 MTR_2g069190 61.765 102 35 2 300 398 20 120 5.01e-33 129
MsG0880042240.01.T01 MTR_2g069090 67.677 99 28 2 300 395 20 117 1.09e-35 137
MsG0880042240.01.T01 MTR_2g069090 69.880 83 25 0 417 499 290 372 2.98e-33 130
MsG0880042240.01.T01 MTR_2g069210 60.870 115 40 3 287 398 4 116 8.98e-35 134
MsG0880042240.01.T01 MTR_2g069210 69.880 83 25 0 417 499 285 367 2.54e-33 130
MsG0880042240.01.T01 MTR_8g009080 68.675 83 26 0 417 499 315 397 1.98e-31 125
MsG0880042240.01.T01 MTR_8g009080 46.099 141 65 5 291 428 38 170 3.85e-24 104
MsG0880042240.01.T01 MTR_2g069300 58.824 102 38 2 300 398 6 106 3.00e-31 124
MsG0880042240.01.T01 MTR_2g069300 62.651 83 31 0 417 499 276 358 9.07e-31 122
MsG0880042240.01.T01 MTR_8g008960 65.278 72 25 0 428 499 31 102 9.79e-28 107
MsG0880042240.01.T01 MTR_1g043770 55.914 93 39 2 304 395 11 102 2.06e-27 112
MsG0880042240.01.T01 MTR_1g043770 55.914 93 39 2 304 395 11 102 3.52e-27 112
MsG0880042240.01.T01 MTR_1g043770 53.535 99 45 1 402 499 257 355 1.14e-26 111
MsG0880042240.01.T01 MTR_1g043760 53.608 97 42 2 301 395 8 103 3.86e-25 107
MsG0880042240.01.T01 MTR_1g043760 46.939 98 51 1 402 498 258 355 2.35e-17 84.0
MsG0880042240.01.T01 MTR_8g041600 60.714 84 32 1 417 499 291 374 5.84e-25 106
MsG0880042240.01.T01 MTR_8g041600 51.000 100 41 3 302 395 22 119 3.49e-19 89.7
MsG0880042240.01.T01 MTR_8g009080 46.099 141 65 5 291 428 38 170 2.29e-24 103
MsG0880042240.01.T01 MTR_1g044105 48.515 101 44 2 302 395 9 108 2.61e-24 100
MsG0880042240.01.T01 MTR_1g043810 51.042 96 44 2 302 395 9 103 3.79e-24 103
MsG0880042240.01.T01 MTR_1g043775 53.125 96 42 2 302 395 9 103 4.20e-24 102
MsG0880042240.01.T01 MTR_8g009080 46.099 141 65 5 291 428 38 170 4.21e-24 103
MsG0880042240.01.T01 MTR_7g056393 54.651 86 36 1 417 499 288 373 5.37e-24 103
MsG0880042240.01.T01 MTR_7g056393 43.617 94 50 2 302 393 22 114 9.29e-17 82.4
MsG0880042240.01.T01 MTR_1g043810 51.515 99 47 1 402 499 259 357 5.49e-24 103
MsG0880042240.01.T01 MTR_1g043810 51.042 96 44 2 302 395 9 103 6.22e-24 103
MsG0880042240.01.T01 MTR_1g043775 53.125 96 42 2 302 395 9 103 6.90e-24 103
MsG0880042240.01.T01 MTR_1g043775 51.515 99 47 1 402 499 259 357 1.67e-23 102
MsG0880042240.01.T01 MTR_1g093140 50.893 112 36 5 298 393 12 120 1.01e-23 103
MsG0880042240.01.T01 MTR_1g093140 48.235 85 42 1 417 499 294 378 6.35e-19 89.0
MsG0880042240.01.T01 MTR_7g056347 54.651 86 36 1 417 499 288 373 1.05e-23 102
MsG0880042240.01.T01 MTR_7g056347 42.748 131 66 4 300 428 20 143 2.98e-21 95.9
MsG0880042240.01.T01 MTR_8g006930 54.651 86 36 1 417 499 288 373 2.40e-23 102
MsG0880042240.01.T01 MTR_8g006930 47.917 96 47 2 302 395 22 116 2.28e-20 93.2
MsG0880042240.01.T01 MTR_8g041620 57.143 84 35 1 417 499 291 374 2.97e-23 101
MsG0880042240.01.T01 MTR_8g041620 51.000 100 41 3 302 395 22 119 4.64e-19 89.4
MsG0880042240.01.T01 MTR_4g119410 53.488 86 37 1 417 499 288 373 6.55e-23 100
MsG0880042240.01.T01 MTR_4g119410 46.154 104 50 4 297 395 14 116 1.01e-19 91.3
MsG0880042240.01.T01 MTR_8g469400 54.651 86 36 1 417 499 275 360 9.71e-23 100
MsG0880042240.01.T01 MTR_8g469400 33.333 195 76 8 292 473 9 162 1.28e-13 72.8
MsG0880042240.01.T01 MTR_4g024660 54.651 86 36 1 417 499 288 373 1.34e-22 99.8
MsG0880042240.01.T01 MTR_4g024660 34.211 190 83 7 297 473 14 174 2.81e-19 89.7
MsG0880042240.01.T01 MTR_8g062600 52.326 86 38 1 417 499 288 373 1.01e-21 97.1
MsG0880042240.01.T01 MTR_8g062600 44.144 111 46 4 295 395 12 116 6.83e-19 88.6
MsG0880042240.01.T01 MTR_2g069060 54.369 103 42 4 398 499 251 349 1.25e-21 96.7
MsG0880042240.01.T01 MTR_2g069060 35.156 128 60 3 301 428 21 125 9.34e-11 63.9
MsG0880042240.01.T01 MTR_1g093120 47.475 99 43 4 302 393 18 114 2.20e-21 96.3
MsG0880042240.01.T01 MTR_1g093120 46.465 99 52 1 402 499 272 370 3.20e-21 95.5
MsG0880042240.01.T01 MTR_1g093110 51.190 84 40 1 417 499 291 374 2.99e-21 95.9
MsG0880042240.01.T01 MTR_1g093110 44.000 100 47 3 302 393 19 117 1.15e-18 88.2
MsG0880042240.01.T01 MTR_0032s0040 52.381 84 39 1 417 499 290 373 3.75e-21 95.5
MsG0880042240.01.T01 MTR_0032s0040 42.975 121 50 3 283 393 3 114 1.53e-16 81.6
MsG0880042240.01.T01 MTR_7g078010 47.917 96 47 2 302 395 22 116 4.82e-21 94.0
MsG0880042240.01.T01 MTR_1g070185 54.217 83 35 1 417 499 288 367 5.17e-21 95.1
MsG0880042240.01.T01 MTR_1g070185 38.710 93 57 0 301 393 22 114 4.37e-15 77.0
MsG0880042240.01.T01 MTR_7g078010 47.917 96 47 2 302 395 22 116 1.41e-20 94.0
MsG0880042240.01.T01 MTR_7g078010 46.512 86 43 1 417 499 288 373 3.28e-18 86.7
MsG0880042240.01.T01 MTR_2g068950 42.857 112 58 3 286 393 1 110 1.82e-20 93.6
MsG0880042240.01.T01 MTR_2g068950 52.874 87 36 2 417 499 284 369 1.16e-17 85.1
MsG0880042240.01.T01 MTR_7g029655 53.488 86 37 2 417 499 285 370 2.50e-20 93.2
MsG0880042240.01.T01 MTR_7g029655 46.535 101 43 2 300 393 15 111 2.16e-19 90.1
MsG0880042240.01.T01 MTR_4g099380 34.911 169 90 5 235 393 58 216 3.43e-20 90.9
MsG0880042240.01.T01 MTR_8g063070 44.340 106 53 4 295 395 12 116 6.60e-20 91.7
MsG0880042240.01.T01 MTR_8g063070 50.000 86 40 1 417 499 288 373 2.73e-18 87.0
MsG0880042240.01.T01 MTR_2g068960 45.536 112 55 4 286 393 1 110 1.16e-19 90.9
MsG0880042240.01.T01 MTR_2g068960 50.575 87 38 2 417 499 284 369 2.12e-17 84.3
MsG0880042240.01.T01 MTR_4g099390 48.810 84 41 1 418 499 1 84 1.21e-19 84.0
MsG0880042240.01.T01 MTR_8g041600 51.000 100 41 3 302 395 22 119 1.25e-19 90.1
MsG0880042240.01.T01 MTR_2g069010 46.957 115 55 3 390 499 262 375 3.93e-19 89.7
MsG0880042240.01.T01 MTR_2g069010 35.606 132 74 3 301 428 21 145 5.37e-17 83.2
MsG0880042240.01.T01 MTR_7g056353 51.765 85 38 1 417 498 262 346 3.65e-18 87.8
MsG0880042240.01.T01 MTR_2g069020 43.299 97 50 2 301 393 19 114 1.99e-17 84.3
MsG0880042240.01.T01 MTR_2g069020 46.341 82 36 3 417 494 288 365 3.84e-12 68.2
MsG0880042240.01.T01 MTR_2g069020 43.299 97 50 2 301 393 19 114 3.23e-17 84.0
MsG0880042240.01.T01 MTR_2g069020 46.341 82 36 3 417 494 288 365 5.46e-12 67.8
MsG0880042240.01.T01 MTR_7g056370 42.857 91 45 3 307 393 6 93 6.18e-16 77.4
MsG0880042240.01.T01 MTR_7g105070 41.758 91 48 2 304 391 15 103 4.62e-14 73.9
MsG0880042240.01.T01 MTR_7g068650 37.374 99 55 3 304 395 6 104 1.60e-13 72.4
MsG0880042240.01.T01 MTR_1g032140 35.398 113 65 2 285 393 2 110 2.93e-13 71.6
MsG0880042240.01.T01 MTR_1g032250 39.535 86 44 2 304 385 28 109 2.05e-12 68.9
MsG0880042240.01.T01 MTR_1g032220 40.230 87 44 2 303 385 27 109 3.24e-12 68.6
MsG0880042240.01.T01 MTR_2g069070 35.156 128 60 3 301 428 21 125 5.43e-12 65.1
MsG0880042240.01.T01 MTR_2g068850 40.698 86 45 3 312 395 21 102 5.58e-12 65.9
MsG0880042240.01.T01 MTR_2g068800 41.379 87 47 2 312 397 21 104 1.73e-11 65.5
MsG0880042240.01.T01 MTR_3g091350 34.711 121 65 3 283 398 1 112 1.74e-11 66.2
MsG0880042240.01.T01 MTR_2g068840 39.773 88 47 3 312 397 21 104 7.13e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042240.01.T01 AT1G09980 36.559 279 135 4 2 243 256 529 2.96e-46 172
MsG0880042240.01.T01 AT1G09980 36.237 287 126 4 2 243 256 530 6.01e-46 172
MsG0880042240.01.T01 AT1G09980 36.237 287 126 4 2 243 256 530 6.01e-46 172
MsG0880042240.01.T01 AT1G58350 36.691 278 129 6 2 243 256 522 8.24e-44 165
MsG0880042240.01.T01 AT1G58350 36.691 278 129 6 2 243 256 522 8.24e-44 165
MsG0880042240.01.T01 AT1G58350 36.691 278 129 6 2 243 256 522 8.24e-44 165
MsG0880042240.01.T01 AT1G06650 63.095 84 30 1 417 499 286 369 4.15e-29 118
MsG0880042240.01.T01 AT1G06650 45.000 100 49 1 301 394 14 113 5.71e-19 89.0
MsG0880042240.01.T01 AT1G04380 54.206 107 47 2 394 499 240 345 4.60e-29 117
MsG0880042240.01.T01 AT1G04380 41.892 74 38 2 323 395 22 91 5.04e-11 64.7
MsG0880042240.01.T01 AT1G06620 62.651 83 31 0 417 499 283 365 3.26e-28 115
MsG0880042240.01.T01 AT1G06620 48.421 95 45 2 304 395 18 111 1.05e-19 91.3
MsG0880042240.01.T01 AT5G59540 54.206 107 47 2 394 499 261 366 1.73e-26 110
MsG0880042240.01.T01 AT5G59540 51.020 98 43 2 302 395 14 110 6.78e-22 97.8
MsG0880042240.01.T01 AT1G06645 60.714 84 32 1 417 499 296 379 2.70e-26 110
MsG0880042240.01.T01 AT1G06645 48.148 108 49 2 294 395 21 127 3.21e-22 99.0
MsG0880042240.01.T01 AT5G59530 58.065 93 38 1 408 499 272 364 2.78e-25 107
MsG0880042240.01.T01 AT5G59530 50.000 98 42 3 302 395 13 107 1.37e-20 93.6
MsG0880042240.01.T01 AT1G06640 59.524 84 33 1 417 499 286 369 7.13e-25 106
MsG0880042240.01.T01 AT1G06640 47.009 117 49 4 289 395 1 114 2.09e-21 96.3
MsG0880042240.01.T01 AT1G58350 33.803 213 93 6 2 177 256 457 1.09e-24 108
MsG0880042240.01.T01 AT1G04350 53.704 108 47 3 394 499 254 360 3.29e-24 104
MsG0880042240.01.T01 AT1G04350 44.554 101 48 2 299 395 8 104 3.51e-18 86.7
MsG0880042240.01.T01 AT5G59540 51.020 98 43 2 302 395 14 110 3.94e-22 96.7
MsG0880042240.01.T01 AT1G06640 47.009 117 49 4 289 395 1 114 1.05e-21 96.3
MsG0880042240.01.T01 AT1G06640 47.009 117 49 4 289 395 1 114 1.41e-21 95.1
MsG0880042240.01.T01 AT5G43440 50.538 93 45 1 408 499 273 365 5.34e-21 95.1
MsG0880042240.01.T01 AT5G43440 46.535 101 46 2 300 394 11 109 2.80e-18 87.0
MsG0880042240.01.T01 AT1G06620 48.421 95 45 2 304 395 18 111 4.89e-20 90.9
MsG0880042240.01.T01 AT1G03410 39.416 137 68 4 264 395 17 143 8.01e-20 92.0
MsG0880042240.01.T01 AT1G03410 47.619 84 42 2 417 499 316 398 2.14e-16 81.6
MsG0880042240.01.T01 AT5G43450 53.012 83 39 0 417 499 280 362 9.61e-20 91.3
MsG0880042240.01.T01 AT5G43450 43.137 102 48 3 300 395 11 108 4.82e-17 83.2
MsG0880042240.01.T01 AT1G03410 46.000 100 48 2 301 395 8 106 2.35e-19 90.1
MsG0880042240.01.T01 AT1G03410 47.619 84 42 2 417 499 279 361 1.31e-16 81.6
MsG0880042240.01.T01 AT1G06650 46.000 100 48 2 301 394 14 113 4.26e-19 88.6
MsG0880042240.01.T01 AT3G61400 43.750 128 67 5 375 499 245 370 5.16e-19 89.0
MsG0880042240.01.T01 AT3G61400 39.474 114 62 2 289 395 1 114 6.98e-18 85.9
MsG0880042240.01.T01 AT2G30830 54.762 84 36 2 417 499 276 358 5.92e-19 89.0
MsG0880042240.01.T01 AT2G30830 44.792 96 52 1 301 395 9 104 6.49e-19 88.6
MsG0880042240.01.T01 AT5G43440 46.535 101 46 2 300 394 11 109 1.23e-18 86.7
MsG0880042240.01.T01 AT3G61400 39.474 114 62 2 289 395 1 114 6.08e-18 84.7
MsG0880042240.01.T01 AT2G30840 54.762 84 36 2 417 499 280 362 9.02e-18 85.5
MsG0880042240.01.T01 AT2G30840 44.000 100 51 2 301 395 9 108 1.85e-17 84.3
MsG0880042240.01.T01 AT2G25450 39.844 128 68 3 301 426 9 129 1.33e-17 84.7
MsG0880042240.01.T01 AT2G25450 51.765 85 38 3 417 499 276 359 5.30e-16 80.1
MsG0880042240.01.T01 AT2G30840 44.000 100 51 2 301 395 9 108 1.51e-17 84.0
MsG0880042240.01.T01 AT2G30840 44.000 100 51 2 301 395 9 108 1.88e-17 84.3
MsG0880042240.01.T01 AT2G30840 53.165 79 35 2 422 499 279 356 5.52e-15 77.0
MsG0880042240.01.T01 AT5G43450 43.137 102 48 3 300 395 11 108 3.36e-17 82.4
MsG0880042240.01.T01 AT1G03400 47.872 94 46 3 408 499 259 351 2.10e-16 81.3
MsG0880042240.01.T01 AT1G03400 43.299 97 42 2 301 393 8 95 9.64e-16 79.0
MsG0880042240.01.T01 AT1G03400 50.000 84 40 2 417 499 297 379 2.69e-16 80.9
MsG0880042240.01.T01 AT1G03400 43.299 97 42 2 301 393 8 95 1.32e-15 79.0
MsG0880042240.01.T01 AT1G04380 41.892 74 38 2 323 395 22 91 3.25e-11 64.3

Find 100 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTTATCAATATCTTTA+AGG 0.109801 8:+5954624 None:intergenic
TCAAGGAAGCATGTGAAATT+TGG 0.187121 8:-5954568 MsG0880042240.01.T01:CDS
CTTCAAGACATGTATATATT+TGG 0.191479 8:-5957625 MsG0880042240.01.T01:CDS
CAAGGAAGCATGTGAAATTT+GGG 0.261903 8:-5954567 MsG0880042240.01.T01:CDS
TCTGATAATTGTTCCTTCAT+TGG 0.279592 8:+5952601 None:intergenic
TTTAGGTAATGGTTTAATAT+TGG 0.293258 8:+5952850 None:intergenic
GAAACAAAAGCCGGTGTAAA+AGG 0.298625 8:-5954749 MsG0880042240.01.T01:CDS
TTGAATCAGATGATACAAAA+TGG 0.314689 8:-5958728 MsG0880042240.01.T01:CDS
ATGCGTTCTACAATAATAAT+AGG 0.320716 8:+5957586 None:intergenic
TTGAATTTCTGCGCAAATCC+TGG 0.325382 8:-5958073 MsG0880042240.01.T01:CDS
AATCACCTCAGCTGCCTGAT+AGG 0.328592 8:-5958659 MsG0880042240.01.T01:CDS
CGCATTATTGCAGTTTGAAT+AGG 0.328610 8:+5957783 None:intergenic
AGATGATCATCCCAAGAAAA+AGG 0.335417 8:+5958478 None:intergenic
CAAATCCTGGGCAGTTGATC+GGG 0.354496 8:-5958060 MsG0880042240.01.T01:CDS
AAGCATGCAACAGATATTCT+TGG 0.361845 8:+5952664 None:intergenic
AAAGCATCCTCAAAACTCTA+TGG 0.370702 8:-5952625 MsG0880042240.01.T01:CDS
TTGGCTTCCTCATATTTGTC+TGG 0.377614 8:+5954677 None:intergenic
GTTAGGTTTGGTTGTATCAA+TGG 0.379115 8:+5954808 None:intergenic
ATCGAATCAATGAGACCTTT+AGG 0.394210 8:+5952833 None:intergenic
AACACTAGCTTCTCTATACT+TGG 0.395678 8:+5952567 None:intergenic
GGGGAACTGAATGGTCAATA+TGG 0.399042 8:-5958040 MsG0880042240.01.T01:CDS
ATTGTTCACCATCAATACTT+TGG 0.404100 8:+5958679 None:intergenic
ACACTGACTTCTTCCCTATC+AGG 0.406625 8:+5958645 None:intergenic
CGAATCAGCTCTTATATCTC+TGG 0.407257 8:-5958432 MsG0880042240.01.T01:CDS
TTTCGAGCAAAAGGACTAGA+TGG 0.411480 8:-5952526 MsG0880042240.01.T01:CDS
CTATTTCCTGTGCCGAGTCT+AGG 0.412169 8:+5956738 None:intergenic
AGTGGGAGTAGCCATCAAAA+TGG 0.414219 8:-5957460 MsG0880042240.01.T01:CDS
ACTGCAATTCTCATTCTATA+CGG 0.423089 8:-5956671 MsG0880042240.01.T01:CDS
TCAATGAGACCTTTAGGTAA+TGG 0.426152 8:+5952839 None:intergenic
ATGTCCTAACCAATGGTTCC+AGG 0.428026 8:-5957498 MsG0880042240.01.T01:CDS
AATGAAGTTTGAATTCAAAC+TGG 0.428284 8:+5957543 None:intergenic
AATAACATGGCTTGTGTTGT+TGG 0.428788 8:+5954658 None:intergenic
AAAAGGTTGAACTGATTTCT+CGG 0.431402 8:+5958495 None:intergenic
ATTCATTGAATGTGGAATCA+AGG 0.437259 8:+5954786 None:intergenic
AATCTTACTGCGCGCTGTGA+TGG 0.443284 8:-5956695 MsG0880042240.01.T01:CDS
TTGAATGTGGAATCAAGGTT+AGG 0.444552 8:+5954791 None:intergenic
ACTAAACTTGTTTGTGGACC+TGG 0.445595 8:+5957480 None:intergenic
CATATTTGTCTGGTTGATGA+TGG 0.446300 8:+5954687 None:intergenic
TAATGCGTGCAGAACTTCAT+AGG 0.447317 8:-5957767 MsG0880042240.01.T01:CDS
GCACGTGTCCAAAGTATTGA+TGG 0.455150 8:-5958687 MsG0880042240.01.T01:CDS
ACAATTCCTTGATGAATACT+TGG 0.457967 8:+5954599 None:intergenic
TGGACCTGGAACCATTGGTT+AGG 0.470640 8:+5957494 None:intergenic
ATCTTACTGCGCGCTGTGAT+GGG 0.473269 8:-5956694 MsG0880042240.01.T01:CDS
CATGCTACTTATGTTTCTAG+TGG 0.481406 8:+5954835 None:intergenic
GCAAATCCTGGGCAGTTGAT+CGG 0.482275 8:-5958061 MsG0880042240.01.T01:CDS
GATGCTCATCAAAGCATTGA+TGG 0.482751 8:-5958832 MsG0880042240.01.T01:CDS
GTGGGAGTAGCCATCAAAAT+GGG 0.483732 8:-5957459 MsG0880042240.01.T01:CDS
TTCTTCTCAGATCTTCAAGC+AGG 0.488246 8:+5958796 None:intergenic
TGTGGAATCAAGGTTAGGTT+TGG 0.492547 8:+5954796 None:intergenic
ACTCCCACTAAACTTGTTTG+TGG 0.495464 8:+5957474 None:intergenic
TTTCAGTCAAATCAATAGCT+TGG 0.497020 8:+5958757 None:intergenic
AGGTCCACAAACAAGTTTAG+TGG 0.498908 8:-5957478 MsG0880042240.01.T01:CDS
GGTGTAAAAGGACTTGTTGA+TGG 0.502805 8:-5954737 MsG0880042240.01.T01:CDS
TGAATTTCTGCGCAAATCCT+GGG 0.502961 8:-5958072 MsG0880042240.01.T01:CDS
ATCACCTCAGCTGCCTGATA+GGG 0.508140 8:-5958658 MsG0880042240.01.T01:CDS
ATGTATTTCTGAAATTCCAC+AGG 0.508977 8:-5958408 MsG0880042240.01.T01:intron
TTTCGATGCAGATCAACAAT+CGG 0.512442 8:-5957651 MsG0880042240.01.T01:intron
AACTCCTCAAGAACACTCAA+AGG 0.516232 8:+5954515 None:intergenic
TCAATACTTTGGACACGTGC+TGG 0.518051 8:+5958690 None:intergenic
AGGAATTGTTGACAAAATCA+AGG 0.519537 8:-5954585 MsG0880042240.01.T01:CDS
AAAACTCTATGGACCAATGA+AGG 0.520934 8:-5952614 MsG0880042240.01.T01:CDS
ACTCCTCAAGAACACTCAAA+GGG 0.527377 8:+5954516 None:intergenic
GGCGAGGTATATCACAAATG+AGG 0.527536 8:-5957746 MsG0880042240.01.T01:CDS
GTTTGTGGACCTGGAACCAT+TGG 0.531877 8:+5957489 None:intergenic
CACTAGAAACATAAGTAGCA+TGG 0.537145 8:-5954834 MsG0880042240.01.T01:CDS
TGCTTTGCATTCATTGAATG+TGG 0.538185 8:+5954778 None:intergenic
GAACACTCAAAGGGATTCCA+TGG 0.540454 8:+5954525 None:intergenic
TTCGATGCAGATCAACAATC+GGG 0.540738 8:-5957650 MsG0880042240.01.T01:intron
AATATTAAACCATTACCTAA+AGG 0.545806 8:-5952848 MsG0880042240.01.T01:CDS
AATCCCTTTGAGTGTTCTTG+AGG 0.545874 8:-5954519 MsG0880042240.01.T01:CDS
TCATCAACCAGACAAATATG+AGG 0.554914 8:-5954684 MsG0880042240.01.T01:CDS
GAATTCAAACTTCATTTCTG+TGG 0.555232 8:-5957536 MsG0880042240.01.T01:CDS
TGAGGATGCTTTAAGTCCTG+TGG 0.557654 8:+5952636 None:intergenic
AGTTCCCCGATCAACTGCCC+AGG 0.568193 8:+5958055 None:intergenic
AAAGATCCAAGTATTCATCA+AGG 0.569279 8:-5954605 MsG0880042240.01.T01:CDS
TCATTCTATACGGTCTTCCA+AGG 0.573571 8:-5956661 MsG0880042240.01.T01:intron
ACTAGAAACATAAGTAGCAT+GGG 0.579690 8:-5954833 MsG0880042240.01.T01:CDS
GCGAGGTATATCACAAATGA+GGG 0.584145 8:-5957745 MsG0880042240.01.T01:intron
AACTGAATGGTCAATATGGA+TGG 0.585995 8:-5958036 MsG0880042240.01.T01:intron
GCAAGGCATGTCCTAACCAA+TGG 0.587661 8:-5957505 MsG0880042240.01.T01:CDS
AGAGTACTTGCAAATCAAGT+TGG 0.587847 8:-5952688 MsG0880042240.01.T01:CDS
AAGGAAGCATGTGAAATTTG+GGG 0.595242 8:-5954566 MsG0880042240.01.T01:CDS
CAGTTGATCGGGGAACTGAA+TGG 0.596793 8:-5958049 MsG0880042240.01.T01:CDS
ATATCTTTAAGGTCTATGAC+AGG 0.600704 8:+5954635 None:intergenic
GCATTTGATGAAACAAAAGC+CGG 0.602319 8:-5954758 MsG0880042240.01.T01:CDS
GGTCCACAAACAAGTTTAGT+GGG 0.604387 8:-5957477 MsG0880042240.01.T01:CDS
GGTTGATGATGGAATAAGCT+TGG 0.607370 8:+5954698 None:intergenic
TTGAATTCAAACTGGCAGAA+CGG 0.613557 8:+5957551 None:intergenic
TCTTCCCTATCAGGCAGCTG+AGG 0.617695 8:+5958654 None:intergenic
GATCTGAGAAGAATAAGCAC+AGG 0.617744 8:-5958786 MsG0880042240.01.T01:CDS
ACACTAGCTTCTCTATACTT+GGG 0.620828 8:+5952568 None:intergenic
ATACTTTGGACACGTGCTGG+TGG 0.624157 8:+5958693 None:intergenic
CTAGCTTCTCTATACTTGGG+AGG 0.625073 8:+5952571 None:intergenic
ATAATAATAGGAACAAGCAA+AGG 0.629914 8:+5957598 None:intergenic
AGAAGACCTAGACTCGGCAC+AGG 0.630642 8:-5956744 MsG0880042240.01.T01:CDS
AAATCCTGGGCAGTTGATCG+GGG 0.652334 8:-5958059 MsG0880042240.01.T01:CDS
TTTCTGTGGAGAATGATGCA+AGG 0.657311 8:-5957522 MsG0880042240.01.T01:CDS
CGTGCAGAACTTCATAGGCG+AGG 0.659181 8:-5957762 MsG0880042240.01.T01:CDS
GGTCTATGACAGGAATAACA+TGG 0.670694 8:+5954645 None:intergenic
GTAAAAGGACTTGTTGATGG+AGG 0.671654 8:-5954734 MsG0880042240.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAGAAGAAAAAAATA+TGG + Chr8:5955999-5956018 None:intergenic 10.0%
!! TCACAAAATAAATAAATATT+AGG - Chr8:5957229-5957248 MsG0880042240.01.T01:intron 10.0%
!! TTAAATAATTATTTAGACAT+AGG + Chr8:5952952-5952971 None:intergenic 10.0%
!!! ATATTATAATTTTTAATGCA+AGG - Chr8:5953109-5953128 MsG0880042240.01.T01:intron 10.0%
!!! TTTTAGTGTTTTAATTTTTT+GGG - Chr8:5955516-5955535 MsG0880042240.01.T01:intron 10.0%
!! ATCACAAAAAAATATAAACA+AGG + Chr8:5954050-5954069 None:intergenic 15.0%
!! GTTGAACAAAAAATAAAAAA+AGG - Chr8:5954966-5954985 MsG0880042240.01.T01:intron 15.0%
!! TCACAAAAAAATATAAACAA+GGG + Chr8:5954049-5954068 None:intergenic 15.0%
!!! AAAATTGCTATTGTAAATAA+AGG + Chr8:5956917-5956936 None:intergenic 15.0%
!!! AAATTATTTTTTACATCAGT+TGG + Chr8:5956298-5956317 None:intergenic 15.0%
!!! ATGTTTTATTTTATCTGATA+TGG - Chr8:5955603-5955622 MsG0880042240.01.T01:intron 15.0%
!!! CTATATTGATAATTTTTTCT+TGG - Chr8:5953067-5953086 MsG0880042240.01.T01:intron 15.0%
!!! GTTTTAGTGTTTTAATTTTT+TGG - Chr8:5955515-5955534 MsG0880042240.01.T01:intron 15.0%
!!! TGTTGATTTTATATGAATTT+GGG - Chr8:5955769-5955788 MsG0880042240.01.T01:intron 15.0%
!!! TTGTTGATTTTATATGAATT+TGG - Chr8:5955768-5955787 MsG0880042240.01.T01:intron 15.0%
!! AATATTAAACCATTACCTAA+AGG - Chr8:5958478-5958497 MsG0880042240.01.T01:CDS 20.0%
!! AATTAAAACACTAAAACAGA+AGG + Chr8:5955512-5955531 None:intergenic 20.0%
!! AATTTGGGAATAAAAATGTT+TGG - Chr8:5955784-5955803 MsG0880042240.01.T01:intron 20.0%
!! ACAAACGTAAAATATTATCT+GGG + Chr8:5954769-5954788 None:intergenic 20.0%
!! AGAGATGTTATATTAGAATA+TGG - Chr8:5957350-5957369 MsG0880042240.01.T01:intron 20.0%
!! AGTACATTACTAATAGTTTA+AGG + Chr8:5957708-5957727 None:intergenic 20.0%
!! ATTAAAACACTAAAACAGAA+GGG + Chr8:5955511-5955530 None:intergenic 20.0%
!! ATTAACAAAATTCGATATGT+CGG + Chr8:5955475-5955494 None:intergenic 20.0%
!! ATTTGTGTGATAGTTTAAAA+TGG + Chr8:5955367-5955386 None:intergenic 20.0%
!! CACAAAAAAATATAAACAAG+GGG + Chr8:5954048-5954067 None:intergenic 20.0%
!! GTAATTATGTAATTATGTTG+TGG - Chr8:5955814-5955833 MsG0880042240.01.T01:intron 20.0%
!! TAAACTTAATAGTATGATCT+AGG + Chr8:5955667-5955686 None:intergenic 20.0%
!! TAGGTATATAAACAAATATG+TGG + Chr8:5956408-5956427 None:intergenic 20.0%
!! TATATTAGAATATGGTAAAC+AGG - Chr8:5957358-5957377 MsG0880042240.01.T01:intron 20.0%
!! TATTTACTGAGTTACAATTA+AGG + Chr8:5956374-5956393 None:intergenic 20.0%
!! TCATATAAAATCAACAACAA+GGG + Chr8:5955765-5955784 None:intergenic 20.0%
!! TTAGTGCTAAAAGTAATATT+AGG + Chr8:5954086-5954105 None:intergenic 20.0%
!! TTATTAATCTGAAAGTTACA+TGG - Chr8:5954830-5954849 MsG0880042240.01.T01:CDS 20.0%
!! TTCATATAAAATCAACAACA+AGG + Chr8:5955766-5955785 None:intergenic 20.0%
!! TTGCCTATAAATAAAAATGA+GGG + Chr8:5958149-5958168 None:intergenic 20.0%
!! TTTGCCTATAAATAAAAATG+AGG + Chr8:5958150-5958169 None:intergenic 20.0%
!!! ACTTAAATCTTTTCTTAAAC+AGG - Chr8:5952781-5952800 MsG0880042240.01.T01:intron 20.0%
!!! AGGGTGATATTTATATTTTT+TGG + Chr8:5954272-5954291 None:intergenic 20.0%
!!! ATAAATATCACCCTTTTTAA+TGG - Chr8:5954278-5954297 MsG0880042240.01.T01:intron 20.0%
!!! CTTTGTTATCAATATCTTTA+AGG + Chr8:5956705-5956724 None:intergenic 20.0%
!!! GTTTTATATTTTGTATCAGT+TGG + Chr8:5957269-5957288 None:intergenic 20.0%
!!! TTTAGGTAATGGTTTAATAT+TGG + Chr8:5958479-5958498 None:intergenic 20.0%
!!! TTTGTGTGATAGTTTAAAAT+GGG + Chr8:5955366-5955385 None:intergenic 20.0%
! AAAACATCGAATTATTACCT+TGG + Chr8:5954685-5954704 None:intergenic 25.0%
! AAATCTTGAATTTCTACATC+AGG + Chr8:5956186-5956205 None:intergenic 25.0%
! AACTTGAATGTCCATTAAAA+AGG + Chr8:5954292-5954311 None:intergenic 25.0%
! AAGTTCTTTATGAAGAGAAA+TGG - Chr8:5957594-5957613 MsG0880042240.01.T01:CDS 25.0%
! AATGAAGTTTGAATTCAAAC+TGG + Chr8:5953786-5953805 None:intergenic 25.0%
! AATGACTTTCAAAGAAATTC+TGG - Chr8:5955573-5955592 MsG0880042240.01.T01:intron 25.0%
! ACAACATACAAAATCAAACA+AGG + Chr8:5958223-5958242 None:intergenic 25.0%
! ACAGAAGTTCATTAAATACA+AGG - Chr8:5953388-5953407 MsG0880042240.01.T01:intron 25.0%
! ACATGGCTGAATAAAAAAAT+AGG - Chr8:5954847-5954866 MsG0880042240.01.T01:intron 25.0%
! ACGTAAATCTATAACATCTT+TGG + Chr8:5955888-5955907 None:intergenic 25.0%
! ACTTGAATGTCCATTAAAAA+GGG + Chr8:5954291-5954310 None:intergenic 25.0%
! ATAATAATAGGAACAAGCAA+AGG + Chr8:5953731-5953750 None:intergenic 25.0%
! ATATAAACAAATATGTGGAC+AGG + Chr8:5956403-5956422 None:intergenic 25.0%
! ATGCGTTCTACAATAATAAT+AGG + Chr8:5953743-5953762 None:intergenic 25.0%
! ATTTAGCGAAAGTTTATTGA+AGG + Chr8:5954360-5954379 None:intergenic 25.0%
! ATTTCTCTTCATAAAGAACT+TGG + Chr8:5957595-5957614 None:intergenic 25.0%
! CAAGTAAAGTAAGCAATATT+AGG + Chr8:5957996-5958015 None:intergenic 25.0%
! CGTAAATCTATAACATCTTT+GGG + Chr8:5955887-5955906 None:intergenic 25.0%
! CTTCAAGACATGTATATATT+TGG - Chr8:5953701-5953720 MsG0880042240.01.T01:intron 25.0%
! GAAGAAGAAACAATGATTTA+TGG + Chr8:5953007-5953026 None:intergenic 25.0%
! GACAAACGTAAAATATTATC+TGG + Chr8:5954770-5954789 None:intergenic 25.0%
! GATTTGCAAACTAATATCTT+GGG - Chr8:5954022-5954041 MsG0880042240.01.T01:intron 25.0%
! TAGTCATTTGTAAAAGAGTT+GGG + Chr8:5958107-5958126 None:intergenic 25.0%
! TCATTTATGATAAGATCCAA+TGG - Chr8:5954428-5954447 MsG0880042240.01.T01:intron 25.0%
! TGAAAACTGATCAAGTTTAA+AGG + Chr8:5954562-5954581 None:intergenic 25.0%
! TTGAATCAGATGATACAAAA+TGG - Chr8:5952598-5952617 MsG0880042240.01.T01:CDS 25.0%
! TTGGCTAATCTAATTTATCA+TGG - Chr8:5957852-5957871 MsG0880042240.01.T01:intron 25.0%
! TTTAGCGAAAGTTTATTGAA+GGG + Chr8:5954359-5954378 None:intergenic 25.0%
!! CTTTCTCGATTTCTTTTTAT+TGG - Chr8:5955284-5955303 MsG0880042240.01.T01:intron 25.0%
!! GCATAAATTGATTCATTCAA+GGG + Chr8:5955175-5955194 None:intergenic 25.0%
!! TGCATAAATTGATTCATTCA+AGG + Chr8:5955176-5955195 None:intergenic 25.0%
!! TTCTTCTGAAAGATCTATTT+AGG - Chr8:5957199-5957218 MsG0880042240.01.T01:intron 25.0%
!! TTTGTTATCTATATGTCATC+AGG - Chr8:5958437-5958456 MsG0880042240.01.T01:CDS 25.0%
!!! AGTTTCTTGCATTTTTAACT+TGG - Chr8:5957902-5957921 MsG0880042240.01.T01:intron 25.0%
!!! ATATCTAGTTCTAGCTATTA+TGG + Chr8:5955736-5955755 None:intergenic 25.0%
!!! CACTTTAAGATGTGAAATTA+TGG - Chr8:5957128-5957147 MsG0880042240.01.T01:intron 25.0%
!!! TAGCCCTCATTTTTATTTAT+AGG - Chr8:5958143-5958162 MsG0880042240.01.T01:intron 25.0%
!!! TATTTTTTGGATTCACAAGA+TGG + Chr8:5954259-5954278 None:intergenic 25.0%
AAAACTGATGTGAAAACTGT+AGG - Chr8:5956119-5956138 MsG0880042240.01.T01:intron 30.0%
AAACTGATGTGAAAACTGTA+GGG - Chr8:5956120-5956139 MsG0880042240.01.T01:intron 30.0%
AAAGATCCAAGTATTCATCA+AGG - Chr8:5956721-5956740 MsG0880042240.01.T01:CDS 30.0%
AACCTTGACATTGAAAGAAT+AGG + Chr8:5952713-5952732 None:intergenic 30.0%
ACAATTCCTTGATGAATACT+TGG + Chr8:5956730-5956749 None:intergenic 30.0%
ACCTCACAAAATATCTACAA+CGG + Chr8:5955105-5955124 None:intergenic 30.0%
ACTGCAATTCTCATTCTATA+CGG - Chr8:5954655-5954674 MsG0880042240.01.T01:CDS 30.0%
AGATAGAATAGTGCCTAATT+TGG - Chr8:5958052-5958071 MsG0880042240.01.T01:CDS 30.0%
AGCTGGTAAACTAATTCAAT+TGG + Chr8:5958292-5958311 None:intergenic 30.0%
AGGAATTGTTGACAAAATCA+AGG - Chr8:5956741-5956760 MsG0880042240.01.T01:CDS 30.0%
AGTTGAAAGATTGTGTTAAG+AGG - Chr8:5956830-5956849 MsG0880042240.01.T01:intron 30.0%
ATATATGCACAACAAAGTTG+AGG - Chr8:5953341-5953360 MsG0880042240.01.T01:intron 30.0%
ATTAGCCAAATTAGATTGCA+TGG + Chr8:5957841-5957860 None:intergenic 30.0%
ATTCATTGAATGTGGAATCA+AGG + Chr8:5956543-5956562 None:intergenic 30.0%
ATTGTTCACCATCAATACTT+TGG + Chr8:5952650-5952669 None:intergenic 30.0%
ATTTATAGCTAGCACTCAAT+TGG - Chr8:5956940-5956959 MsG0880042240.01.T01:intron 30.0%
CAATCATATTCCTTTACTCA+GGG - Chr8:5953212-5953231 MsG0880042240.01.T01:intron 30.0%
CACATCATATCAGTTTACAT+CGG - Chr8:5956246-5956265 MsG0880042240.01.T01:intron 30.0%
CACATCTTAAAGTGAATAAG+TGG + Chr8:5957122-5957141 None:intergenic 30.0%
GAAGTTCATTAAATACAAGG+AGG - Chr8:5953391-5953410 MsG0880042240.01.T01:intron 30.0%
GAATGTTATCTTGTGAGAAA+AGG - Chr8:5953161-5953180 MsG0880042240.01.T01:intron 30.0%
GAATTCAAACTTCATTTCTG+TGG - Chr8:5953790-5953809 MsG0880042240.01.T01:intron 30.0%
GCATGTGTGTAAAATTTATG+CGG - Chr8:5957043-5957062 MsG0880042240.01.T01:intron 30.0%
GGATTTGCAAACTAATATCT+TGG - Chr8:5954021-5954040 MsG0880042240.01.T01:intron 30.0%
GGGAATAAAAATGTTTGGTT+AGG - Chr8:5955789-5955808 MsG0880042240.01.T01:intron 30.0%
GTAAAGTAAGCAATATTAGG+AGG + Chr8:5957993-5958012 None:intergenic 30.0%
GTAGTCATTTGTAAAAGAGT+TGG + Chr8:5958108-5958127 None:intergenic 30.0%
TAGAAAGAAAAAAAACAGCG+AGG + Chr8:5957311-5957330 None:intergenic 30.0%
TATACCTAACTCTTTGTCTT+TGG - Chr8:5956420-5956439 MsG0880042240.01.T01:intron 30.0%
TATATGCACAACAAAGTTGA+GGG - Chr8:5953342-5953361 MsG0880042240.01.T01:intron 30.0%
TATTCTGATTGCTCAATAAG+TGG + Chr8:5957769-5957788 None:intergenic 30.0%
TCAATCATATTCCTTTACTC+AGG - Chr8:5953211-5953230 MsG0880042240.01.T01:intron 30.0%
TCCAAACCATCTTAAAGATA+TGG - Chr8:5957436-5957455 MsG0880042240.01.T01:CDS 30.0%
TCTGATAATTGTTCCTTCAT+TGG + Chr8:5958728-5958747 None:intergenic 30.0%
TTCAAAGAAATTCTGGTGTA+TGG - Chr8:5955580-5955599 MsG0880042240.01.T01:intron 30.0%
TTGCAAATCCTACAAATTGA+AGG + Chr8:5954011-5954030 None:intergenic 30.0%
TTGTTGTGCATATATTGATG+CGG + Chr8:5953336-5953355 None:intergenic 30.0%
TTTCAGTCAAATCAATAGCT+TGG + Chr8:5952572-5952591 None:intergenic 30.0%
! AAAAAAGCCATGTCACTTAT+AGG + Chr8:5954392-5954411 None:intergenic 30.0%
! AAAAGGTTGAACTGATTTCT+CGG + Chr8:5952834-5952853 None:intergenic 30.0%
! AAACAAGGTACTACTTCATT+AGG + Chr8:5958208-5958227 None:intergenic 30.0%
! AAAGATATGGATTGTGCTAA+AGG - Chr8:5957449-5957468 MsG0880042240.01.T01:CDS 30.0%
! AAATTGATTCATTCAAGGGA+TGG + Chr8:5955171-5955190 None:intergenic 30.0%
! AATCAGTTCAACCTTTTTCT+TGG - Chr8:5952837-5952856 MsG0880042240.01.T01:CDS 30.0%
! AATTGAATTAGTTTACCAGC+TGG - Chr8:5958291-5958310 MsG0880042240.01.T01:intron 30.0%
! ATCAGTTCAACCTTTTTCTT+GGG - Chr8:5952838-5952857 MsG0880042240.01.T01:CDS 30.0%
! CACAATCCATATCTTTAAGA+TGG + Chr8:5957445-5957464 None:intergenic 30.0%
! CAGTTTTCACATCAGTTTTA+TGG + Chr8:5956118-5956137 None:intergenic 30.0%
! CTTGGTTTGAGATTTATATC+TGG - Chr8:5953085-5953104 MsG0880042240.01.T01:intron 30.0%
! TGATTTTGTCGAATTGTACT+AGG - Chr8:5958337-5958356 MsG0880042240.01.T01:intron 30.0%
! TTTTTGGATTTCACATCAGT+GGG - Chr8:5956048-5956067 MsG0880042240.01.T01:intron 30.0%
!! AAAACAGGAAAAGTTCTAGA+GGG + Chr8:5955399-5955418 None:intergenic 30.0%
!! ATATCTTTAAGGTCTATGAC+AGG + Chr8:5956694-5956713 None:intergenic 30.0%
!! ATGTATTTCTGAAATTCCAC+AGG - Chr8:5952918-5952937 MsG0880042240.01.T01:intron 30.0%
!! TCCATATCTTTAAGATGGTT+TGG + Chr8:5957440-5957459 None:intergenic 30.0%
!! TTATGGAAAAAAGTGCTACA+AGG + Chr8:5952990-5953009 None:intergenic 30.0%
!!! AATTTTTTGGGTTGTGATTC+AGG - Chr8:5955528-5955547 MsG0880042240.01.T01:intron 30.0%
!!! AGAGTAGTTGTTTTTGTTCA+TGG - Chr8:5953899-5953918 MsG0880042240.01.T01:intron 30.0%
!!! CATTGATTCGATTTTTGGTT+AGG - Chr8:5958504-5958523 MsG0880042240.01.T01:CDS 30.0%
!!! GAGTAGTTGTTTTTGTTCAT+GGG - Chr8:5953900-5953919 MsG0880042240.01.T01:intron 30.0%
!!! GGATAGTTTTAGTTGTTACT+TGG - Chr8:5956965-5956984 MsG0880042240.01.T01:intron 30.0%
!!! GTTTTAGAGCACTTATTGTT+AGG - Chr8:5954205-5954224 MsG0880042240.01.T01:intron 30.0%
!!! TGAAATTTGGGGATTTTTTC+AGG - Chr8:5956771-5956790 MsG0880042240.01.T01:intron 30.0%
!!! TTTTTTCAGGTTGTTAACCA+TGG - Chr8:5956784-5956803 MsG0880042240.01.T01:intron 30.0%
!!! TTTTTTGGATTTCACATCAG+TGG - Chr8:5956047-5956066 MsG0880042240.01.T01:intron 30.0%
AAAAACAGTTGAACCGACTA+CGG + Chr8:5958378-5958397 None:intergenic 35.0%
AAAACTCTATGGACCAATGA+AGG - Chr8:5958712-5958731 MsG0880042240.01.T01:CDS 35.0%
AACTGAATGGTCAATATGGA+TGG - Chr8:5953290-5953309 MsG0880042240.01.T01:intron 35.0%
AAGAAGATATAAGAGACTGC+AGG + Chr8:5953946-5953965 None:intergenic 35.0%
AAGATGGTCGGTATTCATTT+AGG + Chr8:5954243-5954262 None:intergenic 35.0%
AAGCATGCAACAGATATTCT+TGG + Chr8:5958665-5958684 None:intergenic 35.0%
AATAAAAATGAGGGCTAGAG+AGG + Chr8:5958140-5958159 None:intergenic 35.0%
AATATGGATGGTGTAGTCAA+AGG - Chr8:5953302-5953321 MsG0880042240.01.T01:intron 35.0%
ACATTTATACATCCACACCT+AGG + Chr8:5954335-5954354 None:intergenic 35.0%
AGATGATCATCCCAAGAAAA+AGG + Chr8:5952851-5952870 None:intergenic 35.0%
AGGTGCAAATTCTCCAAATT+AGG + Chr8:5958068-5958087 None:intergenic 35.0%
ATAAAAATGAGGGCTAGAGA+GGG + Chr8:5958139-5958158 None:intergenic 35.0%
ATATGCACAACAAAGTTGAG+GGG - Chr8:5953343-5953362 MsG0880042240.01.T01:intron 35.0%
ATCGAATCAATGAGACCTTT+AGG + Chr8:5958496-5958515 None:intergenic 35.0%
ATGAACTTCTGTGTAAGCTA+TGG + Chr8:5953380-5953399 None:intergenic 35.0%
ATTTCACATCAGTGGGTAAA+AGG - Chr8:5956055-5956074 MsG0880042240.01.T01:intron 35.0%
CGATGTAAACTGATATGATG+TGG + Chr8:5956248-5956267 None:intergenic 35.0%
CGCATTATTGCAGTTTGAAT+AGG + Chr8:5953546-5953565 None:intergenic 35.0%
CTCCTATTCTTTCAATGTCA+AGG - Chr8:5952708-5952727 MsG0880042240.01.T01:CDS 35.0%
CTTCAACAGAAACCTCATTA+AGG - Chr8:5955633-5955652 MsG0880042240.01.T01:intron 35.0%
GAAGAGTTAATCTTGACCAT+TGG + Chr8:5954447-5954466 None:intergenic 35.0%
GAATTGATGTCAGAAGCTTT+AGG - Chr8:5957407-5957426 MsG0880042240.01.T01:intron 35.0%
GACACCAAAGCTACAAAAAT+AGG - Chr8:5957810-5957829 MsG0880042240.01.T01:intron 35.0%
GATGTGAAATTATGGCTACT+AGG - Chr8:5957136-5957155 MsG0880042240.01.T01:intron 35.0%
GCATTTGATGAAACAAAAGC+CGG - Chr8:5956568-5956587 MsG0880042240.01.T01:intron 35.0%
GGTTTCTATTAGCAACATGA+AGG - Chr8:5953130-5953149 MsG0880042240.01.T01:intron 35.0%
GTAAAATTTATGCGGTCAGT+TGG - Chr8:5957051-5957070 MsG0880042240.01.T01:intron 35.0%
GTGCTTCTACAAGATCATAT+CGG - Chr8:5957563-5957582 MsG0880042240.01.T01:CDS 35.0%
TAGGAGAGTAAACCTTAATG+AGG + Chr8:5955648-5955667 None:intergenic 35.0%
TCAATGAGACCTTTAGGTAA+TGG + Chr8:5958490-5958509 None:intergenic 35.0%
TCATCAACCAGACAAATATG+AGG - Chr8:5956642-5956661 MsG0880042240.01.T01:intron 35.0%
TGCTTTGCATTCATTGAATG+TGG + Chr8:5956551-5956570 None:intergenic 35.0%
TTAGTGACCTATAAGTGACA+TGG - Chr8:5954382-5954401 MsG0880042240.01.T01:intron 35.0%
TTGAATGTGGAATCAAGGTT+AGG + Chr8:5956538-5956557 None:intergenic 35.0%
TTGAATTCAAACTGGCAGAA+CGG + Chr8:5953778-5953797 None:intergenic 35.0%
TTTCGATGCAGATCAACAAT+CGG - Chr8:5953675-5953694 MsG0880042240.01.T01:intron 35.0%
! AAAGCATCCTCAAAACTCTA+TGG - Chr8:5958701-5958720 MsG0880042240.01.T01:CDS 35.0%
! AACACTAGCTTCTCTATACT+TGG + Chr8:5958762-5958781 None:intergenic 35.0%
! AAGGAAGCATGTGAAATTTG+GGG - Chr8:5956760-5956779 MsG0880042240.01.T01:intron 35.0%
! AATAACATGGCTTGTGTTGT+TGG + Chr8:5956671-5956690 None:intergenic 35.0%
! ACACTAGCTTCTCTATACTT+GGG + Chr8:5958761-5958780 None:intergenic 35.0%
! AGAGTACTTGCAAATCAAGT+TGG - Chr8:5958638-5958657 MsG0880042240.01.T01:intron 35.0%
! ATCAACAAGTCCTTTTACAC+CGG + Chr8:5956590-5956609 None:intergenic 35.0%
! CAAAACAGGAAAAGTTCTAG+AGG + Chr8:5955400-5955419 None:intergenic 35.0%
! CAAGGAAGCATGTGAAATTT+GGG - Chr8:5956759-5956778 MsG0880042240.01.T01:intron 35.0%
! CTAGAACTTTTCCTGTTTTG+TGG - Chr8:5955400-5955419 MsG0880042240.01.T01:intron 35.0%
! GATTTATGATCTGCCTGTTT+TGG - Chr8:5953628-5953647 MsG0880042240.01.T01:intron 35.0%
! GTTAGGTTTGGTTGTATCAA+TGG + Chr8:5956521-5956540 None:intergenic 35.0%
! TAGTCCTTTTGCTCGAAAAT+AGG + Chr8:5958798-5958817 None:intergenic 35.0%
! TATGGGTATTGCAACATGTA+GGG - Chr8:5957074-5957093 MsG0880042240.01.T01:intron 35.0%
! TCAAAACATGCCCATTTTGA+TGG + Chr8:5953880-5953899 None:intergenic 35.0%
! TCAAGGAAGCATGTGAAATT+TGG - Chr8:5956758-5956777 MsG0880042240.01.T01:intron 35.0%
! TCCGTTGTAGATATTTTGTG+AGG - Chr8:5955101-5955120 MsG0880042240.01.T01:intron 35.0%
! TTTTGGATTCACAAGATGGT+CGG + Chr8:5954255-5954274 None:intergenic 35.0%
!! ACAAAGCATTGACATAGACA+CGG + Chr8:5956333-5956352 None:intergenic 35.0%
!! CATATTTGTCTGGTTGATGA+TGG + Chr8:5956642-5956661 None:intergenic 35.0%
!! TGTTTTTGTTCATGGGTTTC+AGG - Chr8:5953907-5953926 MsG0880042240.01.T01:intron 35.0%
!! TTTTCAAGAAGACCTAGACT+CGG - Chr8:5954576-5954595 MsG0880042240.01.T01:CDS 35.0%
!!! GGTCTCATTGATTCGATTTT+TGG - Chr8:5958499-5958518 MsG0880042240.01.T01:CDS 35.0%
!!! GTGTCCTATTTTTGTAGCTT+TGG + Chr8:5957817-5957836 None:intergenic 35.0%
!!! GTTTTGTTTTCCCTGAGTAA+AGG + Chr8:5953225-5953244 None:intergenic 35.0%
AAATTCCAGTCAGCCAAAAC+AGG + Chr8:5953644-5953663 None:intergenic 40.0%
AACTCCTCAAGAACACTCAA+AGG + Chr8:5956814-5956833 None:intergenic 40.0%
AATCCCTTTGAGTGTTCTTG+AGG - Chr8:5956807-5956826 MsG0880042240.01.T01:intron 40.0%
AATGAGGTTTCTGTTGAAGC+AGG + Chr8:5955632-5955651 None:intergenic 40.0%
ACAAACATACCTGCATACTG+CGG + Chr8:5957021-5957040 None:intergenic 40.0%
ACACGCCATGCAATCTAATT+TGG - Chr8:5957833-5957852 MsG0880042240.01.T01:intron 40.0%
ACATAACACCTCCAACAAGA+TGG + Chr8:5957957-5957976 None:intergenic 40.0%
ACATTAACTATGAGAGCTCC+AGG + Chr8:5957638-5957657 None:intergenic 40.0%
ACTCCTCAAGAACACTCAAA+GGG + Chr8:5956813-5956832 None:intergenic 40.0%
AGAACGCAAAGGTTCTTTCA+TGG + Chr8:5954927-5954946 None:intergenic 40.0%
AGGTCCACAAACAAGTTTAG+TGG - Chr8:5953848-5953867 MsG0880042240.01.T01:intron 40.0%
ATAGCTAGCACTCAATTGGA+GGG - Chr8:5956944-5956963 MsG0880042240.01.T01:intron 40.0%
ATGAGGTTTCTGTTGAAGCA+GGG + Chr8:5955631-5955650 None:intergenic 40.0%
ATGTTGTGGCTATGCTTGAT+TGG - Chr8:5955828-5955847 MsG0880042240.01.T01:intron 40.0%
CACACCAAAGACAAAGAGTT+AGG + Chr8:5956427-5956446 None:intergenic 40.0%
CCTGAACCAGAATTAACAGT+GGG - Chr8:5957506-5957525 MsG0880042240.01.T01:CDS 40.0%
CGAATCAGCTCTTATATCTC+TGG - Chr8:5952894-5952913 MsG0880042240.01.T01:intron 40.0%
CTAAACCCCATGGATATCAA+GGG + Chr8:5954889-5954908 None:intergenic 40.0%
CTAACTGCAAAAGAACGCAA+AGG + Chr8:5954938-5954957 None:intergenic 40.0%
CTCCAACAAGATGGAAGATA+AGG + Chr8:5957948-5957967 None:intergenic 40.0%
CTTATCTTCCATCTTGTTGG+AGG - Chr8:5957946-5957965 MsG0880042240.01.T01:intron 40.0%
CTTCGTCACCTTCAATTTGT+AGG - Chr8:5954000-5954019 MsG0880042240.01.T01:intron 40.0%
CTTCTACAAGATCATATCGG+TGG - Chr8:5957566-5957585 MsG0880042240.01.T01:CDS 40.0%
GAAACAAAAGCCGGTGTAAA+AGG - Chr8:5956577-5956596 MsG0880042240.01.T01:intron 40.0%
GATCTGAGAAGAATAAGCAC+AGG - Chr8:5952540-5952559 MsG0880042240.01.T01:CDS 40.0%
GCGAGGTATATCACAAATGA+GGG - Chr8:5953581-5953600 MsG0880042240.01.T01:intron 40.0%
GGAGCTCTCATAGTTAATGT+CGG - Chr8:5957638-5957657 MsG0880042240.01.T01:CDS 40.0%
GGTAAACAGGTGATGAATCT+AGG - Chr8:5957371-5957390 MsG0880042240.01.T01:intron 40.0%
GGTCCACAAACAAGTTTAGT+GGG - Chr8:5953849-5953868 MsG0880042240.01.T01:intron 40.0%
GGTCTATGACAGGAATAACA+TGG + Chr8:5956684-5956703 None:intergenic 40.0%
GGTGACGAAGTAACAAGATA+AGG + Chr8:5953990-5954009 None:intergenic 40.0%
GTATTGCAACATGTAGGGTT+GGG - Chr8:5957079-5957098 MsG0880042240.01.T01:intron 40.0%
GTCTATTACATCAGTGCAAG+TGG - Chr8:5956159-5956178 MsG0880042240.01.T01:intron 40.0%
GTTGTTCCCACTGTTAATTC+TGG + Chr8:5957515-5957534 None:intergenic 40.0%
TAAACCCCATGGATATCAAG+GGG + Chr8:5954888-5954907 None:intergenic 40.0%
TAATGCGTGCAGAACTTCAT+AGG - Chr8:5953559-5953578 MsG0880042240.01.T01:intron 40.0%
TATAGCTAGCACTCAATTGG+AGG - Chr8:5956943-5956962 MsG0880042240.01.T01:intron 40.0%
TATTGCAACATGTAGGGTTG+GGG - Chr8:5957080-5957099 MsG0880042240.01.T01:intron 40.0%
TCATTCTATACGGTCTTCCA+AGG - Chr8:5954665-5954684 MsG0880042240.01.T01:CDS 40.0%
TCCTGAACCAGAATTAACAG+TGG - Chr8:5957505-5957524 MsG0880042240.01.T01:CDS 40.0%
TGAATTTCTGCGCAAATCCT+GGG - Chr8:5953254-5953273 MsG0880042240.01.T01:intron 40.0%
TGCCTTATCTTCCATCTTGT+TGG - Chr8:5957943-5957962 MsG0880042240.01.T01:intron 40.0%
TGTGGAATCAAGGTTAGGTT+TGG + Chr8:5956533-5956552 None:intergenic 40.0%
TGTTGTGGCTATGCTTGATT+GGG - Chr8:5955829-5955848 MsG0880042240.01.T01:intron 40.0%
TTACACAGAAAATGTACGCC+TGG + Chr8:5955336-5955355 None:intergenic 40.0%
TTCACAAAAGCTAAACCCCA+TGG + Chr8:5954899-5954918 None:intergenic 40.0%
TTCGATGCAGATCAACAATC+GGG - Chr8:5953676-5953695 MsG0880042240.01.T01:intron 40.0%
TTCTTCTCAGATCTTCAAGC+AGG + Chr8:5952533-5952552 None:intergenic 40.0%
TTGAATTTCTGCGCAAATCC+TGG - Chr8:5953253-5953272 MsG0880042240.01.T01:intron 40.0%
TTGGCTTCCTCATATTTGTC+TGG + Chr8:5956652-5956671 None:intergenic 40.0%
TTTCGAGCAAAAGGACTAGA+TGG - Chr8:5958800-5958819 MsG0880042240.01.T01:CDS 40.0%
TTTCTGTGGAGAATGATGCA+AGG - Chr8:5953804-5953823 MsG0880042240.01.T01:intron 40.0%
! ACTAAACTTGTTTGTGGACC+TGG + Chr8:5953849-5953868 None:intergenic 40.0%
! ACTCCCACTAAACTTGTTTG+TGG + Chr8:5953855-5953874 None:intergenic 40.0%
! ATTTATGCGGTCAGTTGGTA+TGG - Chr8:5957056-5957075 MsG0880042240.01.T01:intron 40.0%
! CATTGGTCCATAGAGTTTTG+AGG + Chr8:5958711-5958730 None:intergenic 40.0%
! CGTTCTTTTGCAGTTAGGAA+AGG - Chr8:5954941-5954960 MsG0880042240.01.T01:intron 40.0%
! CTTTGCGTTCTTTTGCAGTT+AGG - Chr8:5954936-5954955 MsG0880042240.01.T01:intron 40.0%
! CTTTTAGCACTAACCACCAA+AGG - Chr8:5954093-5954112 MsG0880042240.01.T01:intron 40.0%
! GTAAAAGAGTTGGGTCCTTT+TGG + Chr8:5958098-5958117 None:intergenic 40.0%
! GTATGGGTATTGCAACATGT+AGG - Chr8:5957073-5957092 MsG0880042240.01.T01:intron 40.0%
! TAATGTCGGAGATCTTTTGC+TGG - Chr8:5957652-5957671 MsG0880042240.01.T01:intron 40.0%
! TTTATGCGGTCAGTTGGTAT+GGG - Chr8:5957057-5957076 MsG0880042240.01.T01:intron 40.0%
!! GGTGTAAAAGGACTTGTTGA+TGG - Chr8:5956589-5956608 MsG0880042240.01.T01:intron 40.0%
!! GGTTGATGATGGAATAAGCT+TGG + Chr8:5956631-5956650 None:intergenic 40.0%
!! GTAAAAGGACTTGTTGATGG+AGG - Chr8:5956592-5956611 MsG0880042240.01.T01:intron 40.0%
!! GTAGCCTATTTTCGAGCAAA+AGG - Chr8:5958791-5958810 MsG0880042240.01.T01:CDS 40.0%
!! GTTAATTCTGGTTCAGGACA+AGG + Chr8:5957503-5957522 None:intergenic 40.0%
!!! CAGAAGCACTGTGTTTTACA+TGG - Chr8:5954789-5954808 MsG0880042240.01.T01:CDS 40.0%
AAACCCCATGGATATCAAGG+GGG + Chr8:5954887-5954906 None:intergenic 45.0%
ACCAAAGGCTTATACCACCA+AGG - Chr8:5954108-5954127 MsG0880042240.01.T01:intron 45.0%
AGTCCACATCCTTTCACATC+AGG + Chr8:5956223-5956242 None:intergenic 45.0%
AGTGGGAGTAGCCATCAAAA+TGG - Chr8:5953866-5953885 MsG0880042240.01.T01:intron 45.0%
ATGTCCTAACCAATGGTTCC+AGG - Chr8:5953828-5953847 MsG0880042240.01.T01:intron 45.0%
ATTGATATTGCGCCTGTACC+TGG - Chr8:5957617-5957636 MsG0880042240.01.T01:CDS 45.0%
CAAACATACCTGCATACTGC+GGG + Chr8:5957020-5957039 None:intergenic 45.0%
CAACCTGATGTGAAAGGATG+TGG - Chr8:5956217-5956236 MsG0880042240.01.T01:intron 45.0%
CAGGACAAGGAGGTTAGTAA+TGG + Chr8:5957490-5957509 None:intergenic 45.0%
CATACTGCGGGAAAATCTTC+GGG + Chr8:5957008-5957027 None:intergenic 45.0%
CTAGCTTCTCTATACTTGGG+AGG + Chr8:5958758-5958777 None:intergenic 45.0%
CTCATGAGATGATGCATGCA+TGG - Chr8:5955240-5955259 MsG0880042240.01.T01:intron 45.0%
CTCATGAGCTAGAATCGACT+CGG + Chr8:5955228-5955247 None:intergenic 45.0%
CTGAAATGTGATCCTAGGTG+TGG - Chr8:5954320-5954339 MsG0880042240.01.T01:intron 45.0%
CTTATACCACCAAGGCTTAG+GGG - Chr8:5954116-5954135 MsG0880042240.01.T01:intron 45.0%
GAACACTCAAAGGGATTCCA+TGG + Chr8:5956804-5956823 None:intergenic 45.0%
GACATAGGTGAACAAACCTG+TGG + Chr8:5952937-5952956 None:intergenic 45.0%
GCATACTGCGGGAAAATCTT+CGG + Chr8:5957009-5957028 None:intergenic 45.0%
GCTAAACCCCATGGATATCA+AGG + Chr8:5954890-5954909 None:intergenic 45.0%
GCTTATACCACCAAGGCTTA+GGG - Chr8:5954115-5954134 MsG0880042240.01.T01:intron 45.0%
GGCGAGGTATATCACAAATG+AGG - Chr8:5953580-5953599 MsG0880042240.01.T01:intron 45.0%
GGGGAACTGAATGGTCAATA+TGG - Chr8:5953286-5953305 MsG0880042240.01.T01:intron 45.0%
GGTATTGCAACATGTAGGGT+TGG - Chr8:5957078-5957097 MsG0880042240.01.T01:intron 45.0%
GTAATCGAGATCAAACCAGC+TGG + Chr8:5958309-5958328 None:intergenic 45.0%
GTGGGAGTAGCCATCAAAAT+GGG - Chr8:5953867-5953886 MsG0880042240.01.T01:intron 45.0%
GTTGTGGCTATGCTTGATTG+GGG - Chr8:5955830-5955849 MsG0880042240.01.T01:intron 45.0%
TAGAAAGTCGTTGCAGTTCC+AGG - Chr8:5955315-5955334 MsG0880042240.01.T01:intron 45.0%
TCAAAACCGCAACACATGCT+TGG + Chr8:5955002-5955021 None:intergenic 45.0%
TCAATACTTTGGACACGTGC+TGG + Chr8:5952639-5952658 None:intergenic 45.0%
TCTAACAGTCTGCAACTAGG+AGG + Chr8:5954746-5954765 None:intergenic 45.0%
TGAAATTGTCCCCTAAGCCT+TGG + Chr8:5954128-5954147 None:intergenic 45.0%
TGAACCACTTCAACCGTAGT+CGG - Chr8:5958362-5958381 MsG0880042240.01.T01:intron 45.0%
TGAGGTTTCTGTTGAAGCAG+GGG + Chr8:5955630-5955649 None:intergenic 45.0%
! AAGATTTTCCCGCAGTATGC+AGG - Chr8:5957009-5957028 MsG0880042240.01.T01:intron 45.0%
! AGTTGGGTCCTTTTGGCATA+GGG + Chr8:5958091-5958110 None:intergenic 45.0%
! TGAGGATGCTTTAAGTCCTG+TGG + Chr8:5958693-5958712 None:intergenic 45.0%
! TTGGTGGTATAAGCCTTTGG+TGG + Chr8:5954109-5954128 None:intergenic 45.0%
!! AATTCTGGTTCAGGACAAGG+AGG + Chr8:5957500-5957519 None:intergenic 45.0%
!! ACACTGACTTCTTCCCTATC+AGG + Chr8:5952684-5952703 None:intergenic 45.0%
!! CAGCTCTGAAATGTGATCCT+AGG - Chr8:5954315-5954334 MsG0880042240.01.T01:intron 45.0%
!! CCCACTGTTAATTCTGGTTC+AGG + Chr8:5957509-5957528 None:intergenic 45.0%
!! GCACGTGTCCAAAGTATTGA+TGG - Chr8:5952639-5952658 MsG0880042240.01.T01:CDS 45.0%
!!! GTTGCATGCTTTTTCTCCAC+AGG - Chr8:5958674-5958693 MsG0880042240.01.T01:CDS 45.0%
!!! TTTTTTTTTTAAAACTTTTT+TGG - Chr8:5956032-5956051 MsG0880042240.01.T01:intron 5.0%
AAATCCTGGGCAGTTGATCG+GGG - Chr8:5953267-5953286 MsG0880042240.01.T01:intron 50.0%
AATCACCTCAGCTGCCTGAT+AGG - Chr8:5952667-5952686 MsG0880042240.01.T01:CDS 50.0%
AATCTTACTGCGCGCTGTGA+TGG - Chr8:5954631-5954650 MsG0880042240.01.T01:CDS 50.0%
AATTGTCCCCTAAGCCTTGG+TGG + Chr8:5954125-5954144 None:intergenic 50.0%
ACTATGAGAGCTCCAGGTAC+AGG + Chr8:5957632-5957651 None:intergenic 50.0%
AGATGATGCATGCATGGCTG+CGG - Chr8:5955246-5955265 MsG0880042240.01.T01:intron 50.0%
AGGGCTAGAGAGGGAAAACT+AGG + Chr8:5958130-5958149 None:intergenic 50.0%
ATACTTTGGACACGTGCTGG+TGG + Chr8:5952636-5952655 None:intergenic 50.0%
ATCACCTCAGCTGCCTGATA+GGG - Chr8:5952668-5952687 MsG0880042240.01.T01:CDS 50.0%
ATCTTACTGCGCGCTGTGAT+GGG - Chr8:5954632-5954651 MsG0880042240.01.T01:CDS 50.0%
CAAATCCTGGGCAGTTGATC+GGG - Chr8:5953266-5953285 MsG0880042240.01.T01:intron 50.0%
CAGTCGCAACCTGATGTGAA+AGG - Chr8:5956211-5956230 MsG0880042240.01.T01:intron 50.0%
CAGTTGATCGGGGAACTGAA+TGG - Chr8:5953277-5953296 MsG0880042240.01.T01:intron 50.0%
CTACTGCCAAGCATGTGTTG+CGG - Chr8:5954993-5955012 MsG0880042240.01.T01:intron 50.0%
CTATTTCCTGTGCCGAGTCT+AGG + Chr8:5954591-5954610 None:intergenic 50.0%
CTTCCCCCTTGATATCCATG+GGG - Chr8:5954881-5954900 MsG0880042240.01.T01:intron 50.0%
GCAAATCCTGGGCAGTTGAT+CGG - Chr8:5953265-5953284 MsG0880042240.01.T01:intron 50.0%
GCAAGGCATGTCCTAACCAA+TGG - Chr8:5953821-5953840 MsG0880042240.01.T01:intron 50.0%
GCTTCCCCCTTGATATCCAT+GGG - Chr8:5954880-5954899 MsG0880042240.01.T01:intron 50.0%
GGCTTATACCACCAAGGCTT+AGG - Chr8:5954114-5954133 MsG0880042240.01.T01:intron 50.0%
GGGTCTAACAGTCTGCAACT+AGG + Chr8:5954749-5954768 None:intergenic 50.0%
GTAGGGTTGGGGTTCAAATC+TGG - Chr8:5957091-5957110 MsG0880042240.01.T01:intron 50.0%
GTCACGCTACACCACAAAAC+AGG + Chr8:5955414-5955433 None:intergenic 50.0%
GTTTGTGGACCTGGAACCAT+TGG + Chr8:5953840-5953859 None:intergenic 50.0%
TGAACCGACTACGGTTGAAG+TGG + Chr8:5958369-5958388 None:intergenic 50.0%
TGCTTCCCCCTTGATATCCA+TGG - Chr8:5954879-5954898 MsG0880042240.01.T01:intron 50.0%
TTGCACCTCCCTATGCCAAA+AGG - Chr8:5958080-5958099 MsG0880042240.01.T01:CDS 50.0%
! GAGTTGGGTCCTTTTGGCAT+AGG + Chr8:5958092-5958111 None:intergenic 50.0%
! GCCTTGGTGGTATAAGCCTT+TGG + Chr8:5954112-5954131 None:intergenic 50.0%
! GCGGGAAAATCTTCGGGTTT+GGG + Chr8:5957002-5957021 None:intergenic 50.0%
! GGAAAATCTTCGGGTTTGGG+AGG + Chr8:5956999-5957018 None:intergenic 50.0%
! TGCGGGAAAATCTTCGGGTT+TGG + Chr8:5957003-5957022 None:intergenic 50.0%
! TGGACCTGGAACCATTGGTT+AGG + Chr8:5953835-5953854 None:intergenic 50.0%
!!! ATCTGCCTGTTTTGGCTGAC+TGG - Chr8:5953636-5953655 MsG0880042240.01.T01:intron 50.0%
AGAAGACCTAGACTCGGCAC+AGG - Chr8:5954582-5954601 MsG0880042240.01.T01:CDS 55.0%
CGTGCAGAACTTCATAGGCG+AGG - Chr8:5953564-5953583 MsG0880042240.01.T01:intron 55.0%
TCTTCCCTATCAGGCAGCTG+AGG + Chr8:5952675-5952694 None:intergenic 55.0%
! TCTTCGGGTTTGGGAGGATC+AGG + Chr8:5956993-5957012 None:intergenic 55.0%
! TGGGTCCTTTTGGCATAGGG+AGG + Chr8:5958088-5958107 None:intergenic 55.0%
AGTTCCCCGATCAACTGCCC+AGG + Chr8:5953274-5953293 None:intergenic 60.0%
CATGCATGGCTGCGGCTGAC+AGG - Chr8:5955254-5955273 MsG0880042240.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 5952495 5958853 5952495 ID=MsG0880042240.01;Name=MsG0880042240.01
Chr8 mRNA 5952495 5958853 5952495 ID=MsG0880042240.01.T01;Parent=MsG0880042240.01;Name=MsG0880042240.01.T01;_AED=0.79;_eAED=0.79;_QI=0|0|0|0.22|1|1|9|0|499
Chr8 exon 5958644 5958853 5958644 ID=MsG0880042240.01.T01:exon:1031;Parent=MsG0880042240.01.T01
Chr8 exon 5958409 5958545 5958409 ID=MsG0880042240.01.T01:exon:1030;Parent=MsG0880042240.01.T01
Chr8 exon 5958037 5958115 5958037 ID=MsG0880042240.01.T01:exon:1029;Parent=MsG0880042240.01.T01
Chr8 exon 5957746 5957805 5957746 ID=MsG0880042240.01.T01:exon:1028;Parent=MsG0880042240.01.T01
Chr8 exon 5957427 5957662 5957427 ID=MsG0880042240.01.T01:exon:1027;Parent=MsG0880042240.01.T01
Chr8 exon 5956662 5956772 5956662 ID=MsG0880042240.01.T01:exon:1026;Parent=MsG0880042240.01.T01
Chr8 exon 5954507 5954859 5954507 ID=MsG0880042240.01.T01:exon:1025;Parent=MsG0880042240.01.T01
Chr8 exon 5952828 5952889 5952828 ID=MsG0880042240.01.T01:exon:1024;Parent=MsG0880042240.01.T01
Chr8 exon 5952495 5952746 5952495 ID=MsG0880042240.01.T01:exon:1023;Parent=MsG0880042240.01.T01
Chr8 CDS 5958644 5958853 5958644 ID=MsG0880042240.01.T01:cds;Parent=MsG0880042240.01.T01
Chr8 CDS 5958409 5958545 5958409 ID=MsG0880042240.01.T01:cds;Parent=MsG0880042240.01.T01
Chr8 CDS 5958037 5958115 5958037 ID=MsG0880042240.01.T01:cds;Parent=MsG0880042240.01.T01
Chr8 CDS 5957746 5957805 5957746 ID=MsG0880042240.01.T01:cds;Parent=MsG0880042240.01.T01
Chr8 CDS 5957427 5957662 5957427 ID=MsG0880042240.01.T01:cds;Parent=MsG0880042240.01.T01
Chr8 CDS 5956662 5956772 5956662 ID=MsG0880042240.01.T01:cds;Parent=MsG0880042240.01.T01
Chr8 CDS 5954507 5954859 5954507 ID=MsG0880042240.01.T01:cds;Parent=MsG0880042240.01.T01
Chr8 CDS 5952828 5952889 5952828 ID=MsG0880042240.01.T01:cds;Parent=MsG0880042240.01.T01
Chr8 CDS 5952495 5952746 5952495 ID=MsG0880042240.01.T01:cds;Parent=MsG0880042240.01.T01
Gene Sequence

>MsG0880042240.01.T01

ATGCTCATCAAAGCATTGATGGCTTCTCATGATATCCTGCTTGAAGATCTGAGAAGAATAAGCACAGGCATTGACCAAGCTATTGATTTGACTGAAATCGCGTTTGAATCAGATGATACAAAATGGTTTGATTCAACTCCACCAGCACGTGTCCAAAGTATTGATGGTGAACAATCACCTCAGCTGCCTGATAGGGAAGAAGTCAGTGTCGATGCTACTCATAATATCAATTATCTAACCGAGAAATCAGTTCAACCTTTTTCTTGGGATGATCATCTGTTAAACTCTTTTCAGTCTCTAGCGAATCAGCTCTTATATCTCTGGAATGTATTTCTGAAATTCCACAGGGAAAACAAAACAAAAATACTTGAATTTCTGCGCAAATCCTGGGCAGTTGATCGGGGAACTGAATGGTCAATATGGATGCCTATTCAAACTGCAATAATGCGTGCAGAACTTCATAGGCGAGGTATATCACAAATGAGGATCAACAATCGGGCGCTTCAAGACATGTATATATTTGGAGATCCTTTGCTTGTTCCTATTATTATTGTAGAACGCATGACAAACGTGTACCGTTCTGCCAGTTTGAATTCAAACTTCATTTCTGTGGAGAATGATGCAAGGCATGTCCTAACCAATGGTTCCAGGTCCACAAACAAGTTTAGTGGGAGTAGCCATCAAAATGGGCATGTTTTGAGAGTAGTTGTTTTTGTTCATGGTTTTCAAGAAGACCTAGACTCGGCACAGGAAATAGAGACGAGAGCACATGCAAAAAATCTTACTGCGCGCTGTGATGGGACTGCAATTCTCATTCTATACGGTCTTCCAAGAACCACTAGAAACATAAGTAGCATGGGAACCATTGATACAACCAAACCTAACCTTGATTCCACATTCAATGAATGCAAAGCATTTGATGAAACAAAAGCCGGTGTAAAAGGACTTGTTGATGGAGGACTTGAGAAGATACCAAGCTTATTCCATCATCAACCAGACAAATATGAGGAAGCCAACAACACAAGCCATGTTATTCCTGTCATAGACCTTAAAGATATTGATAACAAAGATCCAAGTATTCATCAAGGAATTGTTGACAAAATCAAGGAAGCATGTGAAATTTGGGGATTTTTTCAGGTTGTTAACCATGGAATCCCTTTGAGTGTTCTTGAGGAGTTGAAAGATTGTTCAATCATGATTGAACCAATATTAAACCATTACCTAAAGGTCTCATTGATTCGATTTTTGCTCATAACAAATGACAAATTCAAGAGTGTTGTACATAGAGTACTTGCAAATCAAGTTGGTCCAAGAATATCTGTTGCATGCTTTTTCTCCACAGGACTTAAAGCATCCTCAAAACTCTATGGACCAATGAAGGAACAATTATCAGAAGACAATCCTCCCAAGTATAGAGAAGCTAGTGTTGCTGATTATGTAGCCTATTTTCGAGCAAAAGGACTAGATGGTACTTCTGCACTTGAACATTACAAAATTTGA
Protein sequence

>MsG0880042240.01.T01

MLIKALMASHDILLEDLRRISTGIDQAIDLTEIAFESDDTKWFDSTPPARVQSIDGEQSPQLPDREEVSVDATHNINYLTEKSVQPFSWDDHLLNSFQSLANQLLYLWNVFLKFHRENKTKILEFLRKSWAVDRGTEWSIWMPIQTAIMRAELHRRGISQMRINNRALQDMYIFGDPLLVPIIIVERMTNVYRSASLNSNFISVENDARHVLTNGSRSTNKFSGSSHQNGHVLRVVVFVHGFQEDLDSAQEIETRAHAKNLTARCDGTAILILYGLPRTTRNISSMGTIDTTKPNLDSTFNECKAFDETKAGVKGLVDGGLEKIPSLFHHQPDKYEEANNTSHVIPVIDLKDIDNKDPSIHQGIVDKIKEACEIWGFFQVVNHGIPLSVLEELKDCSIMIEPILNHYLKVSLIRFLLITNDKFKSVVHRVLANQVGPRISVACFFSTGLKASSKLYGPMKEQLSEDNPPKYREASVADYVAYFRAKGLDGTSALEHYKI*