AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023354.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023354.01.T01 MTR_8g091480 79.545 660 54 5 53 662 136 764 0.0 999
MsG0480023354.01.T01 MTR_6g086840 57.377 61 26 0 2 62 9 69 3.54e-16 75.9
MsG0480023354.01.T01 MTR_5g037350 56.897 58 25 0 1 58 507 564 2.30e-15 80.1
MsG0480023354.01.T01 MTR_1g021865 53.571 56 26 0 6 61 150 205 3.17e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023354.01.T01 AT4G39690 39.911 674 277 16 66 662 28 650 2.67e-120 373

Find 139 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGAATTGCAATGCATTTC+TGG 0.027766 4:+84133044 None:intergenic
TGGCTACCTTTATTTCTTTC+TGG 0.064695 4:-84129068 MsG0480023354.01.T01:CDS
CTTCTGGCAGCTTATCAATT+TGG 0.199243 4:-84133260 MsG0480023354.01.T01:CDS
TTGCAGTTTGATATCATAAA+AGG 0.246440 4:-84129290 MsG0480023354.01.T01:intron
TCCTCTATTTCTTGTTGCTT+TGG 0.247067 4:+84132750 None:intergenic
CAAACTGTTGCGCCATATTC+AGG 0.255562 4:-84129000 MsG0480023354.01.T01:CDS
AGATGGTACCGTTGGAGATT+TGG 0.284453 4:-84133180 MsG0480023354.01.T01:CDS
TGGTGTAAGTGCTGTTCTTC+TGG 0.285174 4:-84133276 MsG0480023354.01.T01:CDS
ATGATATATGACAGAACATT+AGG 0.286506 4:-84133676 MsG0480023354.01.T01:CDS
TAGAGATGAAAATGAGAGTT+AGG 0.302392 4:+84129042 None:intergenic
TAGACTACTTTGAGGATATT+CGG 0.312849 4:+84132941 None:intergenic
GGCGCAACAGTTTGTACTTC+AGG 0.323713 4:+84129009 None:intergenic
GATTCTAATTCTGTCTGAAT+TGG 0.329621 4:+84129856 None:intergenic
CAGCTTCCTTAACCTGAATA+TGG 0.337723 4:+84128988 None:intergenic
TAAAGATTCAGTGTTGGATT+TGG 0.347043 4:-84129806 MsG0480023354.01.T01:intron
TACCATCTATCTGAGCTTCT+TGG 0.353644 4:+84133195 None:intergenic
TCGGAAGGAACCGCTCCTAT+TGG 0.355581 4:-84132432 MsG0480023354.01.T01:CDS
TTCAGGAAAATGACTGTTCT+CGG 0.358853 4:+84132404 None:intergenic
GGCGGCTTTCCTGTAGAATA+AGG 0.365184 4:+84133344 None:intergenic
GGGTGAAGCAAGCAAGAAAC+AGG 0.371190 4:-84128830 MsG0480023354.01.T01:CDS
TTTGAGGATATTCGGGAAAC+TGG 0.371372 4:+84132949 None:intergenic
TCATGTAAGGCTAATGGAAT+TGG 0.371977 4:+84128767 None:intergenic
ACCATCTATCTGAGCTTCTT+GGG 0.372192 4:+84133196 None:intergenic
TGATAATCATGTAAGGCTAA+TGG 0.381766 4:+84128761 None:intergenic
AGACTACTTTGAGGATATTC+GGG 0.386103 4:+84132942 None:intergenic
GTATGTGGAATTGCCTCTTC+CGG 0.390552 4:+84132831 None:intergenic
CTGTTCTCGGTAAGCCCAAT+AGG 0.392777 4:+84132417 None:intergenic
TGCAACAATTTCTGCAGCTT+GGG 0.397283 4:+84128857 None:intergenic
AGGGCACCAGAAAGAAATAA+AGG 0.397394 4:+84129062 None:intergenic
TCTTTGCAGTCTTATCTTGA+AGG 0.406723 4:-84129835 MsG0480023354.01.T01:CDS
TGAAGAGAAGAAAGCATTGA+AGG 0.409657 4:-84132145 MsG0480023354.01.T01:intron
AACAAGAAATAGAGGAAAGA+AGG 0.410076 4:-84132743 MsG0480023354.01.T01:CDS
CAAGCTGCAGAAATTGTTGC+AGG 0.410146 4:-84128855 MsG0480023354.01.T01:CDS
TTGAAACACTAGGCATTTAG+TGG 0.411190 4:-84132288 MsG0480023354.01.T01:intron
CCCCAAGAAGCTCAGATAGA+TGG 0.411326 4:-84133197 MsG0480023354.01.T01:CDS
CGGAAGGAACCGCTCCTATT+GGG 0.416133 4:-84132431 MsG0480023354.01.T01:CDS
TGCAGAAATTGTTGCAGGTT+GGG 0.419821 4:-84128850 MsG0480023354.01.T01:CDS
GTTGCGCCATATTCAGGTTA+AGG 0.421948 4:-84128994 MsG0480023354.01.T01:CDS
CAAAATTTGATAATCATGTA+AGG 0.424894 4:+84128754 None:intergenic
ATTGTTAGATTTCTCACTAG+TGG 0.432394 4:+84133121 None:intergenic
CCATCCATGCTGCGGAGAAA+AGG 0.435414 4:-84132197 MsG0480023354.01.T01:CDS
GGCTGCCTTCTCCTTTGCTA+TGG 0.440609 4:+84131242 None:intergenic
TGCTCAGCATGCTCTACAAC+AGG 0.441340 4:+84133092 None:intergenic
AAAGATAGAACTTGAACAAA+AGG 0.443411 4:-84131434 MsG0480023354.01.T01:intron
GCCTCAGCTCCTTATTCTAC+AGG 0.445592 4:-84133353 MsG0480023354.01.T01:CDS
CTGCAACAATTTCTGCAGCT+TGG 0.450320 4:+84128856 None:intergenic
GATGGTTATGTGACTAAGGA+TGG 0.458201 4:-84132246 MsG0480023354.01.T01:CDS
AGCAGATGTTACCCTAAAAC+CGG 0.467549 4:-84132850 MsG0480023354.01.T01:CDS
AGTCAAATCGCTAGAGGTAG+AGG 0.469705 4:-84133766 MsG0480023354.01.T01:CDS
TGATATATGACAGAACATTA+GGG 0.471940 4:-84133675 MsG0480023354.01.T01:CDS
CGTCTTCTTCCCACCAGGAG+GGG 0.472332 4:-84129252 MsG0480023354.01.T01:CDS
GAAGTGTCTTGCAGAGGAAT+CGG 0.472849 4:+84133011 None:intergenic
ACCAAAGCAACAAGAAATAG+AGG 0.472911 4:-84132751 MsG0480023354.01.T01:CDS
TGCACCACACTCTCTTTACT+AGG 0.475252 4:+84132906 None:intergenic
CTCGTTTCTACAAAATCTAC+AGG 0.477220 4:+84133808 None:intergenic
TTGTTAGATTTCTCACTAGT+GGG 0.477746 4:+84133122 None:intergenic
TCAGATGATAGACTACTTTG+AGG 0.478302 4:+84132933 None:intergenic
ATTCAATCCCATCACCTGAT+TGG 0.482617 4:+84128964 None:intergenic
GTTAAGGAAGCTGACCAATC+AGG 0.484998 4:-84128978 MsG0480023354.01.T01:CDS
CTTGAAGATGCACTGTCAAA+AGG 0.486599 4:-84129883 MsG0480023354.01.T01:CDS
GTCTTCTTCCCACCAGGAGG+GGG 0.488459 4:-84129251 MsG0480023354.01.T01:CDS
AGAAAGAGACATTACTGAGT+TGG 0.509015 4:-84133707 MsG0480023354.01.T01:CDS
CATTTCTGGCTGTGAAAGAC+GGG 0.513311 4:+84133058 None:intergenic
AAACAGGGCTATTTCTGAGC+AGG 0.515557 4:-84128814 MsG0480023354.01.T01:CDS
TTCTCAAATGCATCGAAACC+TGG 0.520951 4:-84133380 MsG0480023354.01.T01:CDS
TCCTTGAGGAATATCACATA+AGG 0.521705 4:-84132461 MsG0480023354.01.T01:CDS
CACTTCGTCTTCTTCCCACC+AGG 0.525654 4:-84129257 MsG0480023354.01.T01:CDS
GTTGGGGAGGTGAAATTCCA+TGG 0.529812 4:-84129116 MsG0480023354.01.T01:CDS
GCTGCGGAGAAAAGGCAAGC+TGG 0.532702 4:-84132189 MsG0480023354.01.T01:CDS
TAACAAAGTTGAGAGTTACT+TGG 0.533499 4:-84128934 MsG0480023354.01.T01:CDS
TCGTCTTCTTCCCACCAGGA+GGG 0.534876 4:-84129253 MsG0480023354.01.T01:CDS
AGAGATGAAAATGAGAGTTA+GGG 0.535393 4:+84129043 None:intergenic
CACAGATAAAGATTCAGTGT+TGG 0.536015 4:-84129812 MsG0480023354.01.T01:CDS
CAATACATTTCTAGATGAGA+AGG 0.536772 4:-84132790 MsG0480023354.01.T01:CDS
TCCTTATGTGATATTCCTCA+AGG 0.538776 4:+84132460 None:intergenic
AGAAACGAGAGTAGATCAGA+TGG 0.539671 4:-84133794 MsG0480023354.01.T01:CDS
CTTAGATAAATACGTTGAGA+AGG 0.540323 4:-84133234 MsG0480023354.01.T01:CDS
TAAGGAGCTGAGGCACCACC+AGG 0.541637 4:+84133362 None:intergenic
CTGCAGAAATTGTTGCAGGT+TGG 0.542615 4:-84128851 MsG0480023354.01.T01:CDS
TGTGTAGATGGCGATGTATG+TGG 0.542975 4:+84132816 None:intergenic
GAAAGATGGTTATGTGACTA+AGG 0.543992 4:-84132250 MsG0480023354.01.T01:CDS
GAAGCTGACCAATCAGGTGA+TGG 0.545832 4:-84128972 MsG0480023354.01.T01:CDS
GCATTTCTGGCTGTGAAAGA+CGG 0.550986 4:+84133057 None:intergenic
TGTTACCCTAAAACCGGAAG+AGG 0.553368 4:-84132844 MsG0480023354.01.T01:CDS
GTTGAGAGTTACTTGGCAGA+AGG 0.554497 4:-84128927 MsG0480023354.01.T01:CDS
ACAAGAAATAGAGGAAAGAA+GGG 0.555242 4:-84132742 MsG0480023354.01.T01:CDS
AATGTATTGTCCTGTGTAGA+TGG 0.555651 4:+84132804 None:intergenic
ACCGTTGGAGATTTGGAGAG+TGG 0.557762 4:-84133173 MsG0480023354.01.T01:CDS
AAACACAAATTATGTCTCCA+TGG 0.557779 4:+84129099 None:intergenic
AACTACAAGAGAAACTACTA+AGG 0.558008 4:-84133731 MsG0480023354.01.T01:CDS
GACTTAGAACCATGAGACTC+GGG 0.558510 4:+84133323 None:intergenic
TTCGTCTTCTTCCCACCAGG+AGG 0.561330 4:-84129254 MsG0480023354.01.T01:CDS
TGTGACTAAGGATGGAAAAG+TGG 0.563049 4:-84132238 MsG0480023354.01.T01:CDS
ATCAGGAGCTTAAGAGAGAG+AGG 0.564403 4:-84131510 MsG0480023354.01.T01:intron
TGACTTAGAACCATGAGACT+CGG 0.565112 4:+84133322 None:intergenic
GAGAGTGTGGTGCAATCTGA+TGG 0.566249 4:-84132897 MsG0480023354.01.T01:CDS
GGAAAGCCGCCCGAGTCTCA+TGG 0.572598 4:-84133332 MsG0480023354.01.T01:CDS
TGCAGCCATAGCAAAGGAGA+AGG 0.574061 4:-84131247 MsG0480023354.01.T01:CDS
GTGCAATCTGATGGAACTGT+TGG 0.575411 4:-84132888 MsG0480023354.01.T01:CDS
GAGTGGACAACATTCAATAG+AGG 0.575621 4:-84133156 MsG0480023354.01.T01:CDS
TTTCGAGAAGATAGATGTGA+AGG 0.578288 4:+84133407 None:intergenic
CCATCTATCTGAGCTTCTTG+GGG 0.580860 4:+84133197 None:intergenic
AGCATAAAATGCCATGCACA+AGG 0.584357 4:+84130057 None:intergenic
AAGCTGACCAATCAGGTGAT+GGG 0.584412 4:-84128971 MsG0480023354.01.T01:CDS
CTAGATAAATGCCTTGTGCA+TGG 0.587164 4:-84130068 MsG0480023354.01.T01:intron
GTTAAATGCAGCCATAGCAA+AGG 0.587718 4:-84131253 MsG0480023354.01.T01:CDS
GCTCAGATAGATGGTACCGT+TGG 0.589756 4:-84133188 MsG0480023354.01.T01:CDS
GCAACGGAGGACTTGAAAGA+TGG 0.590175 4:-84132264 MsG0480023354.01.T01:CDS
TCCTGTAGAATAAGGAGCTG+AGG 0.591674 4:+84133352 None:intergenic
AAGGCTAATGGAATTGGCAT+AGG 0.593123 4:+84128773 None:intergenic
AATACATTTCTAGATGAGAA+GGG 0.594656 4:-84132789 MsG0480023354.01.T01:CDS
GGCATTTAGTGGTGCAACGG+AGG 0.600836 4:-84132277 MsG0480023354.01.T01:CDS
CACATAAGGAATAAGTCGGA+AGG 0.606610 4:-84132447 MsG0480023354.01.T01:CDS
ATTGCTGAAGATCATAATGC+TGG 0.611167 4:-84132984 MsG0480023354.01.T01:CDS
CTCGGTAAGCCCAATAGGAG+CGG 0.612081 4:+84132422 None:intergenic
ATATCACATAAGGAATAAGT+CGG 0.613145 4:-84132451 MsG0480023354.01.T01:CDS
TGATATTCCTCAAGGAGGGT+AGG 0.615245 4:+84132468 None:intergenic
TCCACTCTCCAAATCTCCAA+CGG 0.625691 4:+84133172 None:intergenic
CTAGGCATTTAGTGGTGCAA+CGG 0.626694 4:-84132280 MsG0480023354.01.T01:intron
TCAGGAGCTTAAGAGAGAGA+GGG 0.630189 4:-84131509 MsG0480023354.01.T01:intron
TATTCCTCAAGGAGGGTAGG+TGG 0.635993 4:+84132471 None:intergenic
AACGAGAGTAGATCAGATGG+AGG 0.637592 4:-84133791 MsG0480023354.01.T01:CDS
TATGTGATATTCCTCAAGGA+GGG 0.637767 4:+84132464 None:intergenic
TGTAGAGCATGCTGAGCAGA+AGG 0.641501 4:-84133087 MsG0480023354.01.T01:CDS
ATTGTCTAGAAGAAAGTGTG+AGG 0.650588 4:-84128884 MsG0480023354.01.T01:CDS
ATACATTTCTAGATGAGAAG+GGG 0.652402 4:-84132788 MsG0480023354.01.T01:CDS
GAAAATATAATTAGTTGGGG+AGG 0.653466 4:-84129129 MsG0480023354.01.T01:intron
TTATGTGATATTCCTCAAGG+AGG 0.659296 4:+84132463 None:intergenic
ACATACATCGCCATCTACAC+AGG 0.662961 4:-84132814 MsG0480023354.01.T01:CDS
ATATCAGAAGTGTCTTGCAG+AGG 0.665634 4:+84133005 None:intergenic
AGAAATAGAGGAAAGAAGGG+AGG 0.666008 4:-84132739 MsG0480023354.01.T01:intron
TTGTCTAGAAGAAAGTGTGA+GGG 0.667079 4:-84128883 MsG0480023354.01.T01:CDS
CGTACAAGCCATCCATGCTG+CGG 0.671445 4:-84132205 MsG0480023354.01.T01:CDS
ACAACCACCTACCCTCCTTG+AGG 0.673959 4:-84132475 MsG0480023354.01.T01:CDS
GAGGATAGTCAAATCGCTAG+AGG 0.683862 4:-84133772 MsG0480023354.01.T01:CDS
TGATCCTAGTAAAGAGAGTG+TGG 0.702360 4:-84132910 MsG0480023354.01.T01:CDS
TCAAATGCATCGAAACCTGG+TGG 0.713380 4:-84133377 MsG0480023354.01.T01:CDS
GGTGAAGCAAGCAAGAAACA+GGG 0.728573 4:-84128829 MsG0480023354.01.T01:CDS
TTAGAACCATGAGACTCGGG+CGG 0.744411 4:+84133326 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGTTAACAAAAAAATAA+AGG + Chr4:84130230-84130249 None:intergenic 10.0%
!! AGAAATATTAATGTTAAAAA+AGG - Chr4:84132313-84132332 MsG0480023354.01.T01:intron 10.0%
!! AGCTATAAAAAATTTAAATA+TGG + Chr4:84131444-84131463 None:intergenic 10.0%
!! ATGCTTTATATAAATTTATA+AGG + Chr4:84133124-84133143 None:intergenic 10.0%
!! GCTATAAAAAATTTAAATAT+GGG + Chr4:84131443-84131462 None:intergenic 10.0%
!! TATCTAATATTAATATATAC+AGG + Chr4:84131223-84131242 None:intergenic 10.0%
!!! AAATCTAAAATTATATTGTA+TGG + Chr4:84133243-84133262 None:intergenic 10.0%
!!! TCATTTTAAATTGAATAAAA+AGG + Chr4:84130682-84130701 None:intergenic 10.0%
!!! TTTTTTTTTTGTTTATTGAT+GGG - Chr4:84130517-84130536 MsG0480023354.01.T01:intron 10.0%
!!! TTTTTTTTTTTGTTTATTGA+TGG - Chr4:84130516-84130535 MsG0480023354.01.T01:intron 10.0%
!! ATTTAGAAAGAAAAAATGTA+AGG + Chr4:84130014-84130033 None:intergenic 15.0%
!!! ATAATATTTGTTAAAGTAAG+TGG - Chr4:84131240-84131259 MsG0480023354.01.T01:CDS 15.0%
!!! ATATTTTGTATTTTCATTCA+AGG + Chr4:84132072-84132091 None:intergenic 15.0%
!!! TATCATATTTTTAGCTAATA+AGG - Chr4:84132373-84132392 MsG0480023354.01.T01:intron 15.0%
!!! TCTTCATTTATTTTTGTATA+TGG - Chr4:84132104-84132123 MsG0480023354.01.T01:intron 15.0%
!!! TTTTTTTGTTAACATTTTAG+TGG - Chr4:84130233-84130252 MsG0480023354.01.T01:intron 15.0%
!! AAAATATGAAAAGAAGTTGA+AGG - Chr4:84130581-84130600 MsG0480023354.01.T01:intron 20.0%
!! AAACAATAATTTCTGTATGT+GGG - Chr4:84130774-84130793 MsG0480023354.01.T01:intron 20.0%
!! AAGAAAAAATGTAAGGAAAA+AGG + Chr4:84130007-84130026 None:intergenic 20.0%
!! AAGGGTAATAAATTAGAAAA+GGG + Chr4:84129131-84129150 None:intergenic 20.0%
!! AATGGGAAAATATAATTAGT+TGG - Chr4:84133453-84133472 MsG0480023354.01.T01:intron 20.0%
!! ATATTAATATATACAGGAAG+CGG + Chr4:84131217-84131236 None:intergenic 20.0%
!! ATGGGAAAATATAATTAGTT+GGG - Chr4:84133454-84133473 MsG0480023354.01.T01:intron 20.0%
!! CTAACTTCAATTTATGAAAA+GGG - Chr4:84131462-84131481 MsG0480023354.01.T01:CDS 20.0%
!! GAAATTCAATATGAACTATT+AGG + Chr4:84130862-84130881 None:intergenic 20.0%
!!! AAGTCAAAGTCTTTTTTAAT+TGG - Chr4:84129282-84129301 MsG0480023354.01.T01:CDS 20.0%
!!! AATATATTCAACGTTTGTTT+TGG + Chr4:84132002-84132021 None:intergenic 20.0%
!!! ACAAACGTTGAATATATTTT+TGG - Chr4:84132004-84132023 MsG0480023354.01.T01:intron 20.0%
!!! TGATATTTGTTTGTTCATTT+TGG - Chr4:84130699-84130718 MsG0480023354.01.T01:intron 20.0%
!!! TTTTATCTCAATACTTTATC+AGG - Chr4:84131060-84131079 MsG0480023354.01.T01:intron 20.0%
! AAAGATAGAACTTGAACAAA+AGG - Chr4:84131153-84131172 MsG0480023354.01.T01:intron 25.0%
! AATATGTAATGCAGAAATGA+AGG + Chr4:84129150-84129169 None:intergenic 25.0%
! ACAACCTAAGTAGTAAATTA+CGG + Chr4:84129061-84129080 None:intergenic 25.0%
! ACGTAGATAAATTACCAATA+TGG - Chr4:84133407-84133426 MsG0480023354.01.T01:CDS 25.0%
! AGAAAGTTTGAAGAAAAATC+AGG - Chr4:84131295-84131314 MsG0480023354.01.T01:CDS 25.0%
! AGTATACTCAAAATTGCATA+AGG + Chr4:84131625-84131644 None:intergenic 25.0%
! ATATCACATAAGGAATAAGT+CGG - Chr4:84130136-84130155 MsG0480023354.01.T01:intron 25.0%
! ATATGTAATGCAGAAATGAA+GGG + Chr4:84129149-84129168 None:intergenic 25.0%
! ATGATATATGACAGAACATT+AGG - Chr4:84128911-84128930 MsG0480023354.01.T01:CDS 25.0%
! CAAACAATAATTTCTGTATG+TGG - Chr4:84130773-84130792 MsG0480023354.01.T01:intron 25.0%
! CATAAATGTAAATGCCATAT+TGG + Chr4:84133424-84133443 None:intergenic 25.0%
! GAAGGGTAATAAATTAGAAA+AGG + Chr4:84129132-84129151 None:intergenic 25.0%
! GCTAACTTCAATTTATGAAA+AGG - Chr4:84131461-84131480 MsG0480023354.01.T01:CDS 25.0%
! TAAGTCACTTCAAGAAAAAA+TGG - Chr4:84131120-84131139 MsG0480023354.01.T01:intron 25.0%
! TATTAATATATACAGGAAGC+GGG + Chr4:84131216-84131235 None:intergenic 25.0%
! TGATATATGACAGAACATTA+GGG - Chr4:84128912-84128931 MsG0480023354.01.T01:CDS 25.0%
! TGGGAAAATATAATTAGTTG+GGG - Chr4:84133455-84133474 MsG0480023354.01.T01:intron 25.0%
! TTAGTAGGAAATTACATTCA+TGG - Chr4:84131663-84131682 MsG0480023354.01.T01:intron 25.0%
! TTGCAGTTTGATATCATAAA+AGG - Chr4:84133297-84133316 MsG0480023354.01.T01:CDS 25.0%
!! AAAGGGATATGATTTTCATT+AGG - Chr4:84131479-84131498 MsG0480023354.01.T01:CDS 25.0%
!! AATACATTTCTAGATGAGAA+GGG - Chr4:84129798-84129817 MsG0480023354.01.T01:intron 25.0%
!! AATATCATCTGTGATCTTTT+TGG - Chr4:84129908-84129927 MsG0480023354.01.T01:intron 25.0%
!! CATGCAAATAAATTTAGTTC+TGG - Chr4:84131590-84131609 MsG0480023354.01.T01:intron 25.0%
!! TAAAAAACCTCTTTTTCTTC+AGG + Chr4:84130203-84130222 None:intergenic 25.0%
!! TTATATTTTCTGTTACTCCA+TGG - Chr4:84130063-84130082 MsG0480023354.01.T01:CDS 25.0%
!!! TAATTTGTGTTTTGATACAC+TGG - Chr4:84133499-84133518 MsG0480023354.01.T01:intron 25.0%
!!! TCAAAGTCTTTTTTAATTGG+AGG - Chr4:84129285-84129304 MsG0480023354.01.T01:CDS 25.0%
!!! TGAACTAGTTATTTTGTCTA+TGG - Chr4:84132177-84132196 MsG0480023354.01.T01:CDS 25.0%
!!! TTTCTTTTATATGTGCTGTT+TGG - Chr4:84131006-84131025 MsG0480023354.01.T01:intron 25.0%
!!! TTTTTTGTTTATTGATGGGT+TGG - Chr4:84130521-84130540 MsG0480023354.01.T01:intron 25.0%
AAACACAAATTATGTCTCCA+TGG + Chr4:84133491-84133510 None:intergenic 30.0%
AACAAGAAATAGAGGAAAGA+AGG - Chr4:84129844-84129863 MsG0480023354.01.T01:CDS 30.0%
AACTACAAGAGAAACTACTA+AGG - Chr4:84128856-84128875 MsG0480023354.01.T01:CDS 30.0%
AATGTAATTTCCTACTAAGC+AGG + Chr4:84131661-84131680 None:intergenic 30.0%
ACAAGAAATAGAGGAAAGAA+GGG - Chr4:84129845-84129864 MsG0480023354.01.T01:CDS 30.0%
ACATTTATGTGTGTGCTTAA+TGG - Chr4:84133435-84133454 MsG0480023354.01.T01:intron 30.0%
AGAGATGAAAATGAGAGTTA+GGG + Chr4:84133547-84133566 None:intergenic 30.0%
ATACCCAAGCAAAACTATTA+TGG + Chr4:84131531-84131550 None:intergenic 30.0%
ATATGAACTATTAGGCTCAA+TGG + Chr4:84130854-84130873 None:intergenic 30.0%
ATGTGAAACTGACGAAAATT+TGG + Chr4:84129104-84129123 None:intergenic 30.0%
ATTAATATATACAGGAAGCG+GGG + Chr4:84131215-84131234 None:intergenic 30.0%
ATTGCAAAAGACAATAACAC+AGG - Chr4:84130736-84130755 MsG0480023354.01.T01:intron 30.0%
ATTGTTAGATTTCTCACTAG+TGG + Chr4:84129469-84129488 None:intergenic 30.0%
CAATTACAAAACAACTTGAC+AGG + Chr4:84130956-84130975 None:intergenic 30.0%
CATTCCGTAATTTACTACTT+AGG - Chr4:84129054-84129073 MsG0480023354.01.T01:CDS 30.0%
CATTTATCTAGAGAATCAGA+TGG + Chr4:84132510-84132529 None:intergenic 30.0%
CATTTATGTGTGTGCTTAAT+GGG - Chr4:84133436-84133455 MsG0480023354.01.T01:intron 30.0%
CTGAAGCAAATATTAATGTG+AGG - Chr4:84131384-84131403 MsG0480023354.01.T01:intron 30.0%
CTTAGATAAATACGTTGAGA+AGG - Chr4:84129353-84129372 MsG0480023354.01.T01:intron 30.0%
GAAAAGATTCAAACAATGAC+AGG + Chr4:84131944-84131963 None:intergenic 30.0%
GAAAATATAATTAGTTGGGG+AGG - Chr4:84133458-84133477 MsG0480023354.01.T01:intron 30.0%
GATTCTAATTCTGTCTGAAT+TGG + Chr4:84132734-84132753 None:intergenic 30.0%
GTTAGACCAAGAATTTACAT+TGG + Chr4:84131738-84131757 None:intergenic 30.0%
TAACAAAGTTGAGAGTTACT+TGG - Chr4:84133653-84133672 MsG0480023354.01.T01:intron 30.0%
TAGAGATGAAAATGAGAGTT+AGG + Chr4:84133548-84133567 None:intergenic 30.0%
TATATTAGTGACAAATCCGT+TGG - Chr4:84133055-84133074 MsG0480023354.01.T01:CDS 30.0%
TGAATGTCAAAGATAACCAA+CGG + Chr4:84133074-84133093 None:intergenic 30.0%
TGACTGTATTTAGTAGGATA+AGG - Chr4:84128955-84128974 MsG0480023354.01.T01:CDS 30.0%
TGTTAAAAAAGGCAAAACAC+AGG - Chr4:84132324-84132343 MsG0480023354.01.T01:intron 30.0%
TTAACTAATACATTCTGCCA+TGG + Chr4:84130083-84130102 None:intergenic 30.0%
TTATTAATGTACGTGCTTCT+TGG - Chr4:84132411-84132430 MsG0480023354.01.T01:CDS 30.0%
TTCATTAAAACCTGCTTAGT+AGG - Chr4:84131648-84131667 MsG0480023354.01.T01:intron 30.0%
TTGTTAGATTTCTCACTAGT+GGG + Chr4:84129468-84129487 None:intergenic 30.0%
! ACTTGTTTGCTAAGAATTAC+GGG + Chr4:84131773-84131792 None:intergenic 30.0%
! ATACATTTCTAGATGAGAAG+GGG - Chr4:84129799-84129818 MsG0480023354.01.T01:intron 30.0%
! CAATACATTTCTAGATGAGA+AGG - Chr4:84129797-84129816 MsG0480023354.01.T01:intron 30.0%
! CACTTGTTTGCTAAGAATTA+CGG + Chr4:84131774-84131793 None:intergenic 30.0%
! CTGTTGATTACAAGAATGTA+GGG - Chr4:84128986-84129005 MsG0480023354.01.T01:CDS 30.0%
! GTCATTGTTTGAATCTTTTC+TGG - Chr4:84131944-84131963 MsG0480023354.01.T01:intron 30.0%
! GTTTCTCTTGTAGTTTTTCT+AGG + Chr4:84128851-84128870 None:intergenic 30.0%
! GTTTTGCCAATGTAAATTCT+TGG - Chr4:84131729-84131748 MsG0480023354.01.T01:intron 30.0%
! TAAAGATTCAGTGTTGGATT+TGG - Chr4:84132781-84132800 MsG0480023354.01.T01:CDS 30.0%
! TAGACTACTTTGAGGATATT+CGG + Chr4:84129649-84129668 None:intergenic 30.0%
! TATGTTTTGCTAGACAACTA+CGG - Chr4:84132224-84132243 MsG0480023354.01.T01:CDS 30.0%
! TCATTTTCCTGAAGAAAAAG+AGG - Chr4:84130193-84130212 MsG0480023354.01.T01:intron 30.0%
! TTTACATGGTAGGTTAGTTA+TGG - Chr4:84131805-84131824 MsG0480023354.01.T01:intron 30.0%
!! ATAGCCATAATAGTTTTGCT+TGG - Chr4:84131524-84131543 MsG0480023354.01.T01:intron 30.0%
!! TAGCCATAATAGTTTTGCTT+GGG - Chr4:84131525-84131544 MsG0480023354.01.T01:intron 30.0%
!!! TCATTTTGGTCTTAAATACC+TGG - Chr4:84130713-84130732 MsG0480023354.01.T01:intron 30.0%
!!! TTATCTGCTGTTGACTTTTT+GGG - Chr4:84132885-84132904 MsG0480023354.01.T01:CDS 30.0%
!!! TTCAGACATTTTTTCAAGCT+GGG + Chr4:84131369-84131388 None:intergenic 30.0%
AAGAAACTGCAATGTTGGAT+AGG - Chr4:84130634-84130653 MsG0480023354.01.T01:intron 35.0%
AATCAAAAGAAAGCTCTGCA+AGG + Chr4:84132965-84132984 None:intergenic 35.0%
AATGTAAGGAAAAAGGCTCT+TGG + Chr4:84130000-84130019 None:intergenic 35.0%
AATGTATTGTCCTGTGTAGA+TGG + Chr4:84129786-84129805 None:intergenic 35.0%
ACCAAAGCAACAAGAAATAG+AGG - Chr4:84129836-84129855 MsG0480023354.01.T01:CDS 35.0%
AGAAACTGCAATGTTGGATA+GGG - Chr4:84130635-84130654 MsG0480023354.01.T01:intron 35.0%
AGAAAGAGACATTACTGAGT+TGG - Chr4:84128880-84128899 MsG0480023354.01.T01:CDS 35.0%
AGCTAACTTCTTGAAACACT+AGG - Chr4:84130289-84130308 MsG0480023354.01.T01:intron 35.0%
AGTTTGTCAACTGATCAAGT+CGG - Chr4:84130979-84130998 MsG0480023354.01.T01:intron 35.0%
ATGCACAGATAACAAGAAAC+TGG + Chr4:84132661-84132680 None:intergenic 35.0%
ATTGCTGAAGATCATAATGC+TGG - Chr4:84129603-84129622 MsG0480023354.01.T01:intron 35.0%
CACAGATAAAGATTCAGTGT+TGG - Chr4:84132775-84132794 MsG0480023354.01.T01:CDS 35.0%
CGATGCTTATAGCATGAATA+TGG - Chr4:84133008-84133027 MsG0480023354.01.T01:CDS 35.0%
CTCGTTTCTACAAAATCTAC+AGG + Chr4:84128782-84128801 None:intergenic 35.0%
CTGAGTTTGTCTTGATATAC+AGG - Chr4:84129876-84129895 MsG0480023354.01.T01:CDS 35.0%
CTTGAATTGCAATGCATTTC+TGG + Chr4:84129546-84129565 None:intergenic 35.0%
GAAAGATGGTTATGTGACTA+AGG - Chr4:84130337-84130356 MsG0480023354.01.T01:intron 35.0%
GATAACAAGAAACTGGTAAG+TGG + Chr4:84132654-84132673 None:intergenic 35.0%
GCATTTGCAATTAAAGCAGA+AGG - Chr4:84132850-84132869 MsG0480023354.01.T01:CDS 35.0%
GTAACAGTCAACTACATTTC+AGG + Chr4:84133200-84133219 None:intergenic 35.0%
GTATTTAGTAGGATAAGGCT+TGG - Chr4:84128960-84128979 MsG0480023354.01.T01:CDS 35.0%
TAAAAGCAAAGTTCAAGACC+AGG + Chr4:84131045-84131064 None:intergenic 35.0%
TATGTGATATTCCTCAAGGA+GGG + Chr4:84130126-84130145 None:intergenic 35.0%
TCAGATGATAGACTACTTTG+AGG + Chr4:84129657-84129676 None:intergenic 35.0%
TCATGTAAGGCTAATGGAAT+TGG + Chr4:84133823-84133842 None:intergenic 35.0%
TCCTTATGTGATATTCCTCA+AGG + Chr4:84130130-84130149 None:intergenic 35.0%
TCCTTGAGGAATATCACATA+AGG - Chr4:84130126-84130145 MsG0480023354.01.T01:intron 35.0%
TGATTACAAGAATGTAGGGA+AGG - Chr4:84128990-84129009 MsG0480023354.01.T01:CDS 35.0%
TGCATGTTCATTTACATGGT+AGG - Chr4:84131795-84131814 MsG0480023354.01.T01:intron 35.0%
TGTAGCTGACTGTATTTAGT+AGG - Chr4:84128949-84128968 MsG0480023354.01.T01:CDS 35.0%
TTAATATATACAGGAAGCGG+GGG + Chr4:84131214-84131233 None:intergenic 35.0%
TTATCTACGTACCTTCAACA+AGG + Chr4:84133397-84133416 None:intergenic 35.0%
TTATGTGATATTCCTCAAGG+AGG + Chr4:84130127-84130146 None:intergenic 35.0%
TTCAGGAAAATGACTGTTCT+CGG + Chr4:84130186-84130205 None:intergenic 35.0%
TTGAAACACTAGGCATTTAG+TGG - Chr4:84130299-84130318 MsG0480023354.01.T01:intron 35.0%
TTGACTGCTGAAGAACTTTA+TGG - Chr4:84133149-84133168 MsG0480023354.01.T01:CDS 35.0%
TTTCGAGAAGATAGATGTGA+AGG + Chr4:84129183-84129202 None:intergenic 35.0%
! AGACTACTTTGAGGATATTC+GGG + Chr4:84129648-84129667 None:intergenic 35.0%
! ATTGTCTAGAAGAAAGTGTG+AGG - Chr4:84133703-84133722 MsG0480023354.01.T01:CDS 35.0%
! GCTGTTGATTACAAGAATGT+AGG - Chr4:84128985-84129004 MsG0480023354.01.T01:CDS 35.0%
! GTTATTGTCTTTTGCAATCC+AGG + Chr4:84130734-84130753 None:intergenic 35.0%
! TCCTCTATTTCTTGTTGCTT+TGG + Chr4:84129840-84129859 None:intergenic 35.0%
! TGGCTACCTTTATTTCTTTC+TGG - Chr4:84133519-84133538 MsG0480023354.01.T01:intron 35.0%
! TTCAGCAAGCATTAGTTCTT+TGG + Chr4:84130616-84130635 None:intergenic 35.0%
! TTGAACAAAAGGTGCACATT+AGG - Chr4:84131164-84131183 MsG0480023354.01.T01:intron 35.0%
! TTGTCTAGAAGAAAGTGTGA+GGG - Chr4:84133704-84133723 MsG0480023354.01.T01:CDS 35.0%
!! AGGTGCACATTAGGTTTTAT+TGG - Chr4:84131173-84131192 MsG0480023354.01.T01:intron 35.0%
!! ATAGATGTGAAGGTATCTTC+TGG + Chr4:84129173-84129192 None:intergenic 35.0%
!! CATGGTTGGCTTGAAATTAT+TGG - Chr4:84132247-84132266 MsG0480023354.01.T01:CDS 35.0%
!! GATCTTTTTGGTAATCATGC+TGG - Chr4:84129920-84129939 MsG0480023354.01.T01:intron 35.0%
!! TGAAGAGAAGAAAGCATTGA+AGG - Chr4:84130442-84130461 MsG0480023354.01.T01:intron 35.0%
!! TGAGGCTTACTCTAGAATTA+AGG - Chr4:84131402-84131421 MsG0480023354.01.T01:intron 35.0%
!!! CAACGTTTGTTTTGGTCTTT+GGG + Chr4:84131994-84132013 None:intergenic 35.0%
!!! CAGATGATTTTGTTATTCCC+TGG - Chr4:84129966-84129985 MsG0480023354.01.T01:intron 35.0%
!!! CTTATCTGCTGTTGACTTTT+TGG - Chr4:84132884-84132903 MsG0480023354.01.T01:CDS 35.0%
!!! CTTCAGACATTTTTTCAAGC+TGG + Chr4:84131370-84131389 None:intergenic 35.0%
!!! TCAACGTTTGTTTTGGTCTT+TGG + Chr4:84131995-84132014 None:intergenic 35.0%
!!! TCTTTTTTAATTGGAGGTGC+TGG - Chr4:84129291-84129310 MsG0480023354.01.T01:intron 35.0%
!!! TGACAGGTTTGCTGTTATTT+TGG + Chr4:84131928-84131947 None:intergenic 35.0%
!!! TTTTAGGGTAACATCTGCTT+CGG + Chr4:84129736-84129755 None:intergenic 35.0%
AAGGCTAATGGAATTGGCAT+AGG + Chr4:84133817-84133836 None:intergenic 40.0%
ACCATCTATCTGAGCTTCTT+GGG + Chr4:84129394-84129413 None:intergenic 40.0%
ACTCTCTAATCTATGCGAGT+AGG - Chr4:84130472-84130491 MsG0480023354.01.T01:intron 40.0%
AGAAACGAGAGTAGATCAGA+TGG - Chr4:84128793-84128812 MsG0480023354.01.T01:CDS 40.0%
AGAAATAGAGGAAAGAAGGG+AGG - Chr4:84129848-84129867 MsG0480023354.01.T01:CDS 40.0%
AGCAGATGTTACCCTAAAAC+CGG - Chr4:84129737-84129756 MsG0480023354.01.T01:intron 40.0%
AGCATAAAATGCCATGCACA+AGG + Chr4:84132533-84132552 None:intergenic 40.0%
AGGTATGTTGGCACATTCTT+TGG - Chr4:84133359-84133378 MsG0480023354.01.T01:CDS 40.0%
ATTCAATCCCATCACCTGAT+TGG + Chr4:84133626-84133645 None:intergenic 40.0%
CACATAAGGAATAAGTCGGA+AGG - Chr4:84130140-84130159 MsG0480023354.01.T01:intron 40.0%
CAGCTTCCTTAACCTGAATA+TGG + Chr4:84133602-84133621 None:intergenic 40.0%
CCTGAAGAGACAAGAAACAA+CGG - Chr4:84132818-84132837 MsG0480023354.01.T01:CDS 40.0%
CTAGATAAATGCCTTGTGCA+TGG - Chr4:84132519-84132538 MsG0480023354.01.T01:intron 40.0%
CTTCTGGCAGCTTATCAATT+TGG - Chr4:84129327-84129346 MsG0480023354.01.T01:intron 40.0%
CTTGAAGATGCACTGTCAAA+AGG - Chr4:84132704-84132723 MsG0480023354.01.T01:intron 40.0%
GAAAAATCAGGAGTTAGCAC+AGG - Chr4:84131307-84131326 MsG0480023354.01.T01:CDS 40.0%
GAGTGGACAACATTCAATAG+AGG - Chr4:84129431-84129450 MsG0480023354.01.T01:intron 40.0%
GATGGTTATGTGACTAAGGA+TGG - Chr4:84130341-84130360 MsG0480023354.01.T01:intron 40.0%
GTCAACAGCAGATAAGAACA+CGG + Chr4:84132880-84132899 None:intergenic 40.0%
GTGCTGCATGTTCATTTACA+TGG - Chr4:84131791-84131810 MsG0480023354.01.T01:intron 40.0%
GTTAAATGCAGCCATAGCAA+AGG - Chr4:84131334-84131353 MsG0480023354.01.T01:intron 40.0%
GTTTCTTGTCTCTTCAGGAA+GGG + Chr4:84132816-84132835 None:intergenic 40.0%
TAATATATACAGGAAGCGGG+GGG + Chr4:84131213-84131232 None:intergenic 40.0%
TACAAGAATGTAGGGAAGGA+AGG - Chr4:84128994-84129013 MsG0480023354.01.T01:CDS 40.0%
TACCATCTATCTGAGCTTCT+TGG + Chr4:84129395-84129414 None:intergenic 40.0%
TGACTTAGAACCATGAGACT+CGG + Chr4:84129268-84129287 None:intergenic 40.0%
TGATCCTAGTAAAGAGAGTG+TGG - Chr4:84129677-84129696 MsG0480023354.01.T01:intron 40.0%
TGCAACAATTTCTGCAGCTT+GGG + Chr4:84133733-84133752 None:intergenic 40.0%
TGCAGAAATTGTTGCAGGTT+GGG - Chr4:84133737-84133756 MsG0480023354.01.T01:CDS 40.0%
TGCTGAAGAAACTGCAATGT+TGG - Chr4:84130629-84130648 MsG0480023354.01.T01:intron 40.0%
TGGTAAGCAGAATTGGAAAC+TGG + Chr4:84132634-84132653 None:intergenic 40.0%
TGGTAAGTGGTAAGCAGAAT+TGG + Chr4:84132641-84132660 None:intergenic 40.0%
TGTGACTAAGGATGGAAAAG+TGG - Chr4:84130349-84130368 MsG0480023354.01.T01:intron 40.0%
TGTTTCTTGTCTCTTCAGGA+AGG + Chr4:84132817-84132836 None:intergenic 40.0%
TTCTCAAATGCATCGAAACC+TGG - Chr4:84129207-84129226 MsG0480023354.01.T01:intron 40.0%
TTTGAGGATATTCGGGAAAC+TGG + Chr4:84129641-84129660 None:intergenic 40.0%
! AATTGCCTCTTCCGGTTTTA+GGG + Chr4:84129751-84129770 None:intergenic 40.0%
! ACATGGTAGGTTAGTTATGG+AGG - Chr4:84131808-84131827 MsG0480023354.01.T01:intron 40.0%
! AGGGCACCAGAAAGAAATAA+AGG + Chr4:84133528-84133547 None:intergenic 40.0%
! CATTTGACTCGTTAGTTACG+TGG - Chr4:84130825-84130844 MsG0480023354.01.T01:intron 40.0%
! CTTGCATCTTTGTTTGTGCT+AGG - Chr4:84130558-84130577 MsG0480023354.01.T01:intron 40.0%
! GTTTTGCTTGGGTATAAAGC+CGG - Chr4:84131536-84131555 MsG0480023354.01.T01:intron 40.0%
! TGCTGCACAAAGTTTTGCTT+TGG - Chr4:84132579-84132598 MsG0480023354.01.T01:intron 40.0%
! TTTTGCTTGGGTATAAAGCC+GGG - Chr4:84131537-84131556 MsG0480023354.01.T01:intron 40.0%
!! ATATCAGAAGTGTCTTGCAG+AGG + Chr4:84129585-84129604 None:intergenic 40.0%
!! GAGCATTGAAGGAAGTTATC+TGG + Chr4:84131892-84131911 None:intergenic 40.0%
!! GTCGACTTTTGATAGTTGCA+AGG - Chr4:84132346-84132365 MsG0480023354.01.T01:intron 40.0%
!! GTTGCTTCTTTGAGGTTGAA+AGG - Chr4:84132133-84132152 MsG0480023354.01.T01:intron 40.0%
!! TTTGGCTCTACAATGTTACC+TGG - Chr4:84131024-84131043 MsG0480023354.01.T01:intron 40.0%
AACGAGAGTAGATCAGATGG+AGG - Chr4:84128796-84128815 MsG0480023354.01.T01:CDS 45.0%
AAGCTGACCAATCAGGTGAT+GGG - Chr4:84133616-84133635 MsG0480023354.01.T01:intron 45.0%
ACATACATCGCCATCTACAC+AGG - Chr4:84129773-84129792 MsG0480023354.01.T01:intron 45.0%
AGAGACAAGAAACAACGGCA+CGG - Chr4:84132823-84132842 MsG0480023354.01.T01:CDS 45.0%
AGATGGTACCGTTGGAGATT+TGG - Chr4:84129407-84129426 MsG0480023354.01.T01:intron 45.0%
AGTCAAATCGCTAGAGGTAG+AGG - Chr4:84128821-84128840 MsG0480023354.01.T01:CDS 45.0%
ATCAGGAGCTTAAGAGAGAG+AGG - Chr4:84131077-84131096 MsG0480023354.01.T01:intron 45.0%
ATCCATAGTAGAAGTTGCCC+CGG + Chr4:84131558-84131577 None:intergenic 45.0%
CAAACTGTTGCGCCATATTC+AGG - Chr4:84133587-84133606 MsG0480023354.01.T01:intron 45.0%
CAAGCTGCAGAAATTGTTGC+AGG - Chr4:84133732-84133751 MsG0480023354.01.T01:CDS 45.0%
CATTCAGTACAGCTGTACCA+AGG - Chr4:84132034-84132053 MsG0480023354.01.T01:intron 45.0%
CCATCTATCTGAGCTTCTTG+GGG + Chr4:84129393-84129412 None:intergenic 45.0%
CTAGGCATTTAGTGGTGCAA+CGG - Chr4:84130307-84130326 MsG0480023354.01.T01:intron 45.0%
CTGCAACAATTTCTGCAGCT+TGG + Chr4:84133734-84133753 None:intergenic 45.0%
CTGCAGAAATTGTTGCAGGT+TGG - Chr4:84133736-84133755 MsG0480023354.01.T01:CDS 45.0%
GACTTAGAACCATGAGACTC+GGG + Chr4:84129267-84129286 None:intergenic 45.0%
GAGGATAGTCAAATCGCTAG+AGG - Chr4:84128815-84128834 MsG0480023354.01.T01:CDS 45.0%
GCGTATAGCATCCTTGTTGA+AGG - Chr4:84133383-84133402 MsG0480023354.01.T01:CDS 45.0%
GGTGAAGCAAGCAAGAAACA+GGG - Chr4:84133758-84133777 MsG0480023354.01.T01:CDS 45.0%
GTATGTGGAATTGCCTCTTC+CGG + Chr4:84129759-84129778 None:intergenic 45.0%
GTGCAATCTGATGGAACTGT+TGG - Chr4:84129699-84129718 MsG0480023354.01.T01:intron 45.0%
GTTAAGGAAGCTGACCAATC+AGG - Chr4:84133609-84133628 MsG0480023354.01.T01:intron 45.0%
GTTGAGAGTTACTTGGCAGA+AGG - Chr4:84133660-84133679 MsG0480023354.01.T01:CDS 45.0%
TCAAATGCATCGAAACCTGG+TGG - Chr4:84129210-84129229 MsG0480023354.01.T01:intron 45.0%
TCAGGAGCTTAAGAGAGAGA+GGG - Chr4:84131078-84131097 MsG0480023354.01.T01:intron 45.0%
TCCACTCTCCAAATCTCCAA+CGG + Chr4:84129418-84129437 None:intergenic 45.0%
TCCTGTAGAATAAGGAGCTG+AGG + Chr4:84129238-84129257 None:intergenic 45.0%
TGATATTCCTCAAGGAGGGT+AGG + Chr4:84130122-84130141 None:intergenic 45.0%
TGCACCACACTCTCTTTACT+AGG + Chr4:84129684-84129703 None:intergenic 45.0%
TGTGTAGATGGCGATGTATG+TGG + Chr4:84129774-84129793 None:intergenic 45.0%
TGTTACCCTAAAACCGGAAG+AGG - Chr4:84129743-84129762 MsG0480023354.01.T01:intron 45.0%
TTTGCTAGACAACTACGGCA+TGG - Chr4:84132229-84132248 MsG0480023354.01.T01:CDS 45.0%
TTTGCTTGGGTATAAAGCCG+GGG - Chr4:84131538-84131557 MsG0480023354.01.T01:intron 45.0%
! GAAGTGTCTTGCAGAGGAAT+CGG + Chr4:84129579-84129598 None:intergenic 45.0%
! GAATTGCCTCTTCCGGTTTT+AGG + Chr4:84129752-84129771 None:intergenic 45.0%
! GTTGCGCCATATTCAGGTTA+AGG - Chr4:84133593-84133612 MsG0480023354.01.T01:intron 45.0%
! TGGTGTAAGTGCTGTTCTTC+TGG - Chr4:84129311-84129330 MsG0480023354.01.T01:intron 45.0%
!! AAACAGGGCTATTTCTGAGC+AGG - Chr4:84133773-84133792 MsG0480023354.01.T01:CDS 45.0%
!! CATTTCTGGCTGTGAAAGAC+GGG + Chr4:84129532-84129551 None:intergenic 45.0%
!! CCGTTGTTTCTTGTCTCTTC+AGG + Chr4:84132821-84132840 None:intergenic 45.0%
!! CTCATCACGAAGAGCATTGA+AGG + Chr4:84131903-84131922 None:intergenic 45.0%
!! GCATTTCTGGCTGTGAAAGA+CGG + Chr4:84129533-84129552 None:intergenic 45.0%
!! GCTTCTTTGAGGTTGAAAGG+TGG - Chr4:84132136-84132155 MsG0480023354.01.T01:intron 45.0%
!! GGACTTGTGTTGCTTCTTTG+AGG - Chr4:84132125-84132144 MsG0480023354.01.T01:intron 45.0%
ACCGTTGGAGATTTGGAGAG+TGG - Chr4:84129414-84129433 MsG0480023354.01.T01:intron 50.0%
CCCCAAGAAGCTCAGATAGA+TGG - Chr4:84129390-84129409 MsG0480023354.01.T01:intron 50.0%
CTAGACAACTACGGCATGGT+TGG - Chr4:84132233-84132252 MsG0480023354.01.T01:CDS 50.0%
CTGTTCTCGGTAAGCCCAAT+AGG + Chr4:84130173-84130192 None:intergenic 50.0%
GAAGCTGACCAATCAGGTGA+TGG - Chr4:84133615-84133634 MsG0480023354.01.T01:intron 50.0%
GCAACGGAGGACTTGAAAGA+TGG - Chr4:84130323-84130342 MsG0480023354.01.T01:intron 50.0%
GCCTCAGCTCCTTATTCTAC+AGG - Chr4:84129234-84129253 MsG0480023354.01.T01:intron 50.0%
GCTCAGATAGATGGTACCGT+TGG - Chr4:84129399-84129418 MsG0480023354.01.T01:intron 50.0%
GGCGCAACAGTTTGTACTTC+AGG + Chr4:84133581-84133600 None:intergenic 50.0%
GGCGGCTTTCCTGTAGAATA+AGG + Chr4:84129246-84129265 None:intergenic 50.0%
GGGTGAAGCAAGCAAGAAAC+AGG - Chr4:84133757-84133776 MsG0480023354.01.T01:CDS 50.0%
GTTGGGGAGGTGAAATTCCA+TGG - Chr4:84133471-84133490 MsG0480023354.01.T01:intron 50.0%
TATTCCTCAAGGAGGGTAGG+TGG + Chr4:84130119-84130138 None:intergenic 50.0%
TGCAGCCATAGCAAAGGAGA+AGG - Chr4:84131340-84131359 MsG0480023354.01.T01:intron 50.0%
TGCTCAGCATGCTCTACAAC+AGG + Chr4:84129498-84129517 None:intergenic 50.0%
TGTAGAGCATGCTGAGCAGA+AGG - Chr4:84129500-84129519 MsG0480023354.01.T01:intron 50.0%
TTAGAACCATGAGACTCGGG+CGG + Chr4:84129264-84129283 None:intergenic 50.0%
! GAGAGTGTGGTGCAATCTGA+TGG - Chr4:84129690-84129709 MsG0480023354.01.T01:intron 50.0%
ACAACCACCTACCCTCCTTG+AGG - Chr4:84130112-84130131 MsG0480023354.01.T01:intron 55.0%
AGCCGGGGCAACTTCTACTA+TGG - Chr4:84131553-84131572 MsG0480023354.01.T01:intron 55.0%
AGGCTCTTGGTCTGAATGCC+AGG + Chr4:84129987-84130006 None:intergenic 55.0%
CAAGGTGAACACACCAGCCT+TGG + Chr4:84132054-84132073 None:intergenic 55.0%
CAAGTGCAAGTGCTCTCTGC+AGG + Chr4:84132688-84132707 None:intergenic 55.0%
CACTTCGTCTTCTTCCCACC+AGG - Chr4:84133330-84133349 MsG0480023354.01.T01:CDS 55.0%
CAGTACAGCTGTACCAAGGC+TGG - Chr4:84132038-84132057 MsG0480023354.01.T01:intron 55.0%
CCATCCATGCTGCGGAGAAA+AGG - Chr4:84130390-84130409 MsG0480023354.01.T01:intron 55.0%
CGGAAGGAACCGCTCCTATT+GGG - Chr4:84130156-84130175 MsG0480023354.01.T01:intron 55.0%
CGTACAAGCCATCCATGCTG+CGG - Chr4:84130382-84130401 MsG0480023354.01.T01:intron 55.0%
CTCGGTAAGCCCAATAGGAG+CGG + Chr4:84130168-84130187 None:intergenic 55.0%
GGCATTTAGTGGTGCAACGG+AGG - Chr4:84130310-84130329 MsG0480023354.01.T01:intron 55.0%
GGCTCTTGGTCTGAATGCCA+GGG + Chr4:84129986-84130005 None:intergenic 55.0%
GGCTGCCTTCTCCTTTGCTA+TGG + Chr4:84131348-84131367 None:intergenic 55.0%
TCGGAAGGAACCGCTCCTAT+TGG - Chr4:84130155-84130174 MsG0480023354.01.T01:intron 55.0%
TCGTCTTCTTCCCACCAGGA+GGG - Chr4:84133334-84133353 MsG0480023354.01.T01:CDS 55.0%
TTCGTCTTCTTCCCACCAGG+AGG - Chr4:84133333-84133352 MsG0480023354.01.T01:CDS 55.0%
! CCTTTTCTCCGCAGCATGGA+TGG + Chr4:84130393-84130412 None:intergenic 55.0%
! CTTGCCTTTTCTCCGCAGCA+TGG + Chr4:84130397-84130416 None:intergenic 55.0%
AACATACCTCCCCCTCCTGG+TGG + Chr4:84133348-84133367 None:intergenic 60.0%
ACATACCTCCCCCTCCTGGT+GGG + Chr4:84133347-84133366 None:intergenic 60.0%
CGTCTTCTTCCCACCAGGAG+GGG - Chr4:84133335-84133354 MsG0480023354.01.T01:CDS 60.0%
GCTGCGGAGAAAAGGCAAGC+TGG - Chr4:84130398-84130417 MsG0480023354.01.T01:intron 60.0%
GTCTTCTTCCCACCAGGAGG+GGG - Chr4:84133336-84133355 MsG0480023354.01.T01:CDS 60.0%
! ACCAGGAGGGGGAGGTATGT+TGG - Chr4:84133347-84133366 MsG0480023354.01.T01:CDS 60.0%
! TAAGGAGCTGAGGCACCACC+AGG + Chr4:84129228-84129247 None:intergenic 60.0%
GCCAACATACCTCCCCCTCC+TGG + Chr4:84133351-84133370 None:intergenic 65.0%
GGAAAGCCGCCCGAGTCTCA+TGG - Chr4:84129255-84129274 MsG0480023354.01.T01:CDS 65.0%
TTCTTCCCACCAGGAGGGGG+AGG - Chr4:84133339-84133358 MsG0480023354.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 84128767 84133842 84128767 ID=MsG0480023354.01;Name=MsG0480023354.01
Chr4 mRNA 84128767 84133842 84128767 ID=MsG0480023354.01.T01;Parent=MsG0480023354.01;Name=MsG0480023354.01.T01;_AED=0.35;_eAED=0.42;_QI=0|0.55|0.5|1|1|1|10|0|662
Chr4 exon 84133660 84133842 84133660 ID=MsG0480023354.01.T01:exon:12157;Parent=MsG0480023354.01.T01
Chr4 exon 84132740 84133435 84132740 ID=MsG0480023354.01.T01:exon:12156;Parent=MsG0480023354.01.T01
Chr4 exon 84132395 84132520 84132395 ID=MsG0480023354.01.T01:exon:12155;Parent=MsG0480023354.01.T01
Chr4 exon 84132146 84132298 84132146 ID=MsG0480023354.01.T01:exon:12154;Parent=MsG0480023354.01.T01
Chr4 exon 84131435 84131527 84131435 ID=MsG0480023354.01.T01:exon:12153;Parent=MsG0480023354.01.T01
Chr4 exon 84131209 84131328 84131209 ID=MsG0480023354.01.T01:exon:12152;Parent=MsG0480023354.01.T01
Chr4 exon 84130009 84130086 84130009 ID=MsG0480023354.01.T01:exon:12151;Parent=MsG0480023354.01.T01
Chr4 exon 84129807 84129917 84129807 ID=MsG0480023354.01.T01:exon:12150;Parent=MsG0480023354.01.T01
Chr4 exon 84129249 84129306 84129249 ID=MsG0480023354.01.T01:exon:12149;Parent=MsG0480023354.01.T01
Chr4 exon 84128767 84129137 84128767 ID=MsG0480023354.01.T01:exon:12148;Parent=MsG0480023354.01.T01
Chr4 CDS 84133660 84133842 84133660 ID=MsG0480023354.01.T01:cds;Parent=MsG0480023354.01.T01
Chr4 CDS 84132740 84133435 84132740 ID=MsG0480023354.01.T01:cds;Parent=MsG0480023354.01.T01
Chr4 CDS 84132395 84132520 84132395 ID=MsG0480023354.01.T01:cds;Parent=MsG0480023354.01.T01
Chr4 CDS 84132146 84132298 84132146 ID=MsG0480023354.01.T01:cds;Parent=MsG0480023354.01.T01
Chr4 CDS 84131435 84131527 84131435 ID=MsG0480023354.01.T01:cds;Parent=MsG0480023354.01.T01
Chr4 CDS 84131209 84131328 84131209 ID=MsG0480023354.01.T01:cds;Parent=MsG0480023354.01.T01
Chr4 CDS 84130009 84130086 84130009 ID=MsG0480023354.01.T01:cds;Parent=MsG0480023354.01.T01
Chr4 CDS 84129807 84129917 84129807 ID=MsG0480023354.01.T01:cds;Parent=MsG0480023354.01.T01
Chr4 CDS 84129249 84129306 84129249 ID=MsG0480023354.01.T01:cds;Parent=MsG0480023354.01.T01
Chr4 CDS 84128767 84129137 84128767 ID=MsG0480023354.01.T01:cds;Parent=MsG0480023354.01.T01
Gene Sequence

>MsG0480023354.01.T01

ATGGAAAGAAGACCTGTAGATTTTGTAGAAACGAGAGTAGATCAGATGGAGGATAGTCAAATCGCTAGAGGTAGAGGAAGACCTAGAAAAACTACAAGAGAAACTACTAAGGAAGAAAGAGACATTACTGAGTTGGATAGAGATATGATATATGACAGAACATTAGGGCATTATTTGATCAATAAGATACCTTCACATCTATCTTCTCGAAAGAAATTCTCAAATGCATCGAAACCTGGTGGTGCCTCAGCTCCTTATTCTACAGGAAAGCCGCCCGAGTCTCATGGTTCTAAGTCAAAGTCTTTTTTAATTGGAGGTGCTGGTGTAAGTGCTGTTCTTCTGGCAGCTTATCAATTTGGTTTCTTAGATAAATACGTTGAGAAGGAGAAGCTTAGTATTCCCCAAGAAGCTCAGATAGATGGTACCGTTGGAGATTTGGAGAGTGGACAACATTCAATAGAGGAGTTAATTTCACCCACTAGTGAGAAATCTAACAATGAAAATCCTGTTGTAGAGCATGCTGAGCAGAAGGTTGATACCCGTCTTTCACAGCCAGAAATGCATTGCAATTCAAGATGTGATAAACCGATTCCTCTGCAAGACACTTCTGATATTGCTGAAGATCATAATGCTGGTGCAAAAGAAAACCAGTTTCCCGAATATCCTCAAAGTAGTCTATCATCTGATGATCCTAGTAAAGAGAGTGTGGTGCAATCTGATGGAACTGTTGGCATAAAAAGCACCGAAGCAGATGTTACCCTAAAACCGGAAGAGGCAATTCCACATACATCGCCATCTACACAGGACAATACATTTCTAGATGAGAAGGGGACAGAAAATATTCAACCAAAGCAACAAGAAATAGAGGAAAGAAGGGAGAATGTATTAGTTAAAGATATAGAACAACCACCTACCCTCCTTGAGGAATATCACATAAGGAATAAGTCGGAAGGAACCGCTCCTATTGGGCTTACCGAGAACAGTCATTTTCCTGAAGAAAAAGAGGCATTTAGTGGTGCAACGGAGGACTTGAAAGATGGTTATGTGACTAAGGATGGAAAAGTGGTTCTTGATTTCGTACAAGCCATCCATGCTGCGGAGAAAAGGCAAGCTGGAATAGATGCACATGCTTTTAATGAAGAGAAGAAAGCATTGAAGGAGCTTAAGAGAGAGAGGGCAAAAGCAGCTCTTGCTATTAAGTCACTTCAAGAAAAAATGGACGAGAAACTAAAGATAGAACTTGAACAAAAGAAAATCGAAGCAGAAGAAAGTTTGAAGAAAAATCAGGAGTTAGCACAGGCAGAGTTAAATGCAGCCATAGCAAAGGAGAAGGCAGCCCAGCTTGAAAAAATGTCTGAAGCAAATATTAATATAAATGCCTTGTGCATGGCATTTTATGCTCGATCTGAAGAAGCTCGTCAAAGTCATGCTGCACAAAGTTTTGCTTTGAGAGCACTTGCACTTGAAGATGCACTGTCAAAAGGATTGCCAATTCAGACAGAATTAGAATCTTTGCAGTCTTATCTTGAAGGCACAGATAAAGATTCAGTGTTGGATTTGTTTGATATCATAAAAGGTAATGTACGACACTTCGTCTTCTTCCCACCAGGAGGGGGAGTTGGGGAGGTGAAATTCCATGGAGACATAATTTGTGTTTTGATACACTGGCTACCTTTATTTCTTTCTGGTGCCCTAACTCTCATTTTCATCTCTATCGAATTCATCCTGAAGTACAAACTGTTGCGCCATATTCAGGTTAAGGAAGCTGACCAATCAGGTGATGGGATTGAATCTGTTATTAACAAAGTTGAGAGTTACTTGGCAGAAGGAAAACTTGCTGAAGCAGCAGATTGTCTAGAAGAAAGTGTGAGGGATACCCAAGCTGCAGAAATTGTTGCAGGTTGGGTGAAGCAAGCAAGAAACAGGGCTATTTCTGAGCAGGCTGTAGTTTTTCTTCAATCCTATGCCAATTCCATTAGCCTTACATGA

Protein sequence

>MsG0480023354.01.T01

MERRPVDFVETRVDQMEDSQIARGRGRPRKTTRETTKEERDITELDRDMIYDRTLGHYLINKIPSHLSSRKKFSNASKPGGASAPYSTGKPPESHGSKSKSFLIGGAGVSAVLLAAYQFGFLDKYVEKEKLSIPQEAQIDGTVGDLESGQHSIEELISPTSEKSNNENPVVEHAEQKVDTRLSQPEMHCNSRCDKPIPLQDTSDIAEDHNAGAKENQFPEYPQSSLSSDDPSKESVVQSDGTVGIKSTEADVTLKPEEAIPHTSPSTQDNTFLDEKGTENIQPKQQEIEERRENVLVKDIEQPPTLLEEYHIRNKSEGTAPIGLTENSHFPEEKEAFSGATEDLKDGYVTKDGKVVLDFVQAIHAAEKRQAGIDAHAFNEEKKALKELKRERAKAALAIKSLQEKMDEKLKIELEQKKIEAEESLKKNQELAQAELNAAIAKEKAAQLEKMSEANININALCMAFYARSEEARQSHAAQSFALRALALEDALSKGLPIQTELESLQSYLEGTDKDSVLDLFDIIKGNVRHFVFFPPGGGVGEVKFHGDIICVLIHWLPLFLSGALTLIFISIEFILKYKLLRHIQVKEADQSGDGIESVINKVESYLAEGKLAEAADCLEESVRDTQAAEIVAGWVKQARNRAISEQAVVFLQSYANSISLT*