AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042437.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042437.01.T01 MTR_8g018790 96.086 511 20 0 129 639 377 887 0.0 979
MsG0880042437.01.T01 MTR_8g018790 88.679 106 12 0 4 109 124 229 2.10e-55 202
MsG0880042437.01.T01 MTR_8g018790 96.086 511 20 0 129 639 244 754 0.0 978
MsG0880042437.01.T01 MTR_8g018790 87.500 96 12 0 14 109 1 96 9.76e-49 182
MsG0880042437.01.T01 MTR_3g104720 49.511 511 246 4 129 638 155 654 9.09e-177 517
MsG0880042437.01.T01 MTR_3g104720 49.511 511 246 4 129 638 375 874 8.27e-174 517
MsG0880042437.01.T01 MTR_3g104720 62.727 110 35 1 3 112 121 224 2.12e-37 149
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042437.01.T01 AT4G33090 49.509 509 250 3 129 636 375 877 2.78e-171 511
MsG0880042437.01.T01 AT4G33090 62.727 110 35 1 3 112 121 224 8.78e-38 150

Find 115 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGCTTGCATATTACCTTTC+TGG 0.158504 8:-8686178 None:intergenic
TCCTATCATGTCAACTTATT+TGG 0.159095 8:+8682534 MsG0880042437.01.T01:CDS
CCTTGGAGATGTTACATTTC+AGG 0.180009 8:+8684341 MsG0880042437.01.T01:CDS
TTGCTTCCTACTGATAAATT+TGG 0.231301 8:+8685214 MsG0880042437.01.T01:CDS
TCAATTAACAGATAACATTT+TGG 0.233090 8:+8684782 MsG0880042437.01.T01:CDS
GTCATCTTTGCTTATGTTGA+TGG 0.247022 8:+8685453 MsG0880042437.01.T01:CDS
TTGAATTGTTACTTGCTAAT+AGG 0.251377 8:-8687586 None:intergenic
AGTCTAGTTTATCAATAGTT+TGG 0.259305 8:+8687688 MsG0880042437.01.T01:three_prime_UTR
AAGACAGACAAAATTTCTTT+TGG 0.270921 8:+8684991 MsG0880042437.01.T01:CDS
TTCAATTCATTCACCGAATC+TGG 0.274082 8:-8685656 None:intergenic
GATACCTAATGCAGGATAAC+TGG 0.287369 8:+8687190 MsG0880042437.01.T01:intron
TAGGAGGCCACCGCCATATT+TGG 0.295445 8:-8687226 None:intergenic
CGGCATGAAGACCGGATAAA+AGG 0.319395 8:-8684922 None:intergenic
GAAAGAATCTTGGCCAAATA+TGG 0.321375 8:+8687213 MsG0880042437.01.T01:CDS
TTAGGTTGGGATTCTATATC+TGG 0.324165 8:+8686012 MsG0880042437.01.T01:CDS
TTGAACAGCACTTATGTTGA+TGG 0.336637 8:+8682225 MsG0880042437.01.T01:CDS
GCATATTACCTTTCTGGTGT+TGG 0.358586 8:-8686172 None:intergenic
ATGCAAGAACAGAAGATCTA+TGG 0.365654 8:+8684673 MsG0880042437.01.T01:CDS
GTCTAGTTTATCAATAGTTT+GGG 0.372442 8:+8687689 MsG0880042437.01.T01:three_prime_UTR
AGAACCTCTAGAACAACATT+TGG 0.379085 8:-8686814 None:intergenic
TACGCATTTATGAGACCGTT+TGG 0.385416 8:+8682635 MsG0880042437.01.T01:CDS
TATTTGGTGGCTGTTGTTGT+TGG 0.390439 8:+8682550 MsG0880042437.01.T01:CDS
TCAATTTAATGATGAACAAT+TGG 0.393019 8:+8684727 MsG0880042437.01.T01:CDS
CTGGGATGAACCTGCTCTTA+AGG 0.397192 8:+8682314 MsG0880042437.01.T01:CDS
TAAATTACAGGCAACTTTCA+AGG 0.397294 8:+8682411 MsG0880042437.01.T01:intron
CGACGGAAACGCTCTTTGTC+AGG 0.401597 8:+8685414 MsG0880042437.01.T01:CDS
AGGTTAGTCAAGAAAATCTA+TGG 0.401673 8:+8685098 MsG0880042437.01.T01:CDS
GTTAATTGTTTGATCAAGTC+TGG 0.413540 8:-8687532 None:intergenic
TATCATGTCAACTTATTTGG+TGG 0.423293 8:+8682537 MsG0880042437.01.T01:CDS
CTAAGCGGAATAAGCTTAGA+AGG 0.424160 8:+8686981 MsG0880042437.01.T01:CDS
GTTAATTGAACATGAATAAC+CGG 0.428688 8:-8684768 None:intergenic
GACAAAGAGCACGGGATATC+CGG 0.431826 8:+8684749 MsG0880042437.01.T01:CDS
ACCGTTATGTTGAACCAGTT+CGG 0.438786 8:-8685041 None:intergenic
TTGTTCATCATTAAATTGAC+TGG 0.439451 8:-8684723 None:intergenic
CGAATCTGGAATGGCGTCAA+TGG 0.444500 8:-8685642 None:intergenic
AAAAGTTTGTATCTATGGAT+TGG 0.446668 8:+8687740 MsG0880042437.01.T01:three_prime_UTR
GAACCAATACACAAGGTTAT+CGG 0.451080 8:-8684962 None:intergenic
GTTCCGATAACCTTGTGTAT+TGG 0.451223 8:+8684959 MsG0880042437.01.T01:CDS
CATTGACGCCATTCCAGATT+CGG 0.452747 8:+8685643 MsG0880042437.01.T01:CDS
ACCAAATAAGTTGACATGAT+AGG 0.453198 8:-8682535 None:intergenic
GAACCTCTAGAACAACATTT+GGG 0.456961 8:-8686813 None:intergenic
TACTGTTTGTGCAGACGGTT+AGG 0.461207 8:+8685994 MsG0880042437.01.T01:intron
CTCACAAGTGATATGTTAGT+AGG 0.474896 8:-8682676 None:intergenic
GTTGAAAATGAAAAGCTAGA+TGG 0.480379 8:+8682481 MsG0880042437.01.T01:CDS
TGGCTTATTTGATCATATTG+AGG 0.483123 8:+8682570 MsG0880042437.01.T01:CDS
TTTGTGCAGACGGTTAGGTT+GGG 0.485537 8:+8685999 MsG0880042437.01.T01:intron
GTTTGTGCAGACGGTTAGGT+TGG 0.485838 8:+8685998 MsG0880042437.01.T01:intron
ACATAAATGATATCTTGATC+TGG 0.491459 8:-8686957 None:intergenic
GGATAACTGGGAAAGAATCT+TGG 0.495540 8:+8687203 MsG0880042437.01.T01:intron
ACAAGCTTGCGGTTCGATTG+AGG 0.500013 8:+8685170 MsG0880042437.01.T01:CDS
AAGGGTTGATATATCCGAAC+TGG 0.507435 8:+8685027 MsG0880042437.01.T01:CDS
TTAGGAATATCCTAGTCTGC+TGG 0.510308 8:-8687628 None:intergenic
TATGGTCACAACACAGTTTG+AGG 0.512165 8:+8682263 MsG0880042437.01.T01:CDS
GACTTATGAAGTTGGTAAGT+AGG 0.514943 8:-8687245 None:intergenic
TACATACATACCTTAAGAGC+AGG 0.517213 8:-8682324 None:intergenic
GTGTTCTGCTCCAGCAGACT+AGG 0.517244 8:+8687618 MsG0880042437.01.T01:three_prime_UTR
AAAGTCAATGTTGATCAAAG+TGG 0.517933 8:+8685124 MsG0880042437.01.T01:CDS
TTATCCGGTCTTCATGCCGA+TGG 0.517987 8:+8684926 MsG0880042437.01.T01:CDS
CTGTCCATCGGCATGAAGAC+CGG 0.518274 8:-8684930 None:intergenic
GGGAGAAGTTATCGAGGCAT+TGG 0.518708 8:+8686062 MsG0880042437.01.T01:CDS
GACAATGCAGTTAACTCTGA+TGG 0.525557 8:-8682448 None:intergenic
TTCAAGTTCATAACGATGGA+AGG 0.527005 8:-8687442 None:intergenic
GATGCTGTCAGCTATGAGAA+AGG 0.528116 8:+8684288 MsG0880042437.01.T01:CDS
AGAATGTTGCAGAGTTACCT+TGG 0.529952 8:+8684324 MsG0880042437.01.T01:CDS
AACTGCAGTCAAATGGTTGA+AGG 0.530392 8:+8687010 MsG0880042437.01.T01:CDS
GATGGAAGGGTTCATGCGGC+TGG 0.532676 8:-8687428 None:intergenic
CTCAAACAAGTCAATCCAAA+CGG 0.534632 8:-8682650 None:intergenic
TACTGGTGAAAGGAGTGGAT+TGG 0.538472 8:+8686307 MsG0880042437.01.T01:CDS
GCGGTGGAACTGCAGTCAAA+TGG 0.543053 8:+8687003 MsG0880042437.01.T01:CDS
GCTGTAATGAGGAGTACTAC+TGG 0.544418 8:+8686290 MsG0880042437.01.T01:CDS
ATACCTAATGCAGGATAACT+GGG 0.545306 8:+8687191 MsG0880042437.01.T01:intron
CATAAGTCTGATAGTTCCAC+TGG 0.547429 8:+8687260 MsG0880042437.01.T01:CDS
CAATCCACCTTGCTTTGATG+CGG 0.555970 8:-8687483 None:intergenic
AACGTGCTTTCAGAGGTATC+TGG 0.558318 8:+8684696 MsG0880042437.01.T01:CDS
TCCGAACTGGTTCAACATAA+CGG 0.561048 8:+8685040 MsG0880042437.01.T01:CDS
CGTTCAACAAAATCTGAAAA+CGG 0.561122 8:-8686125 None:intergenic
TTCATTCACCGAATCTGGAA+TGG 0.563269 8:-8685651 None:intergenic
GTCTTCATGCCGATGGACAG+TGG 0.568664 8:+8684933 MsG0880042437.01.T01:CDS
AACTATCAGACTTATGAAGT+TGG 0.577467 8:-8687253 None:intergenic
ATTGAGGATAGAACTTCTAC+TGG 0.578223 8:+8682586 MsG0880042437.01.T01:CDS
TACGTTCAAGTTCATAACGA+TGG 0.579877 8:-8687446 None:intergenic
CGGAACAATCCACTGTCCAT+CGG 0.585883 8:-8684942 None:intergenic
CTGCTTATATAGCTGTAATG+AGG 0.590610 8:+8686279 MsG0880042437.01.T01:CDS
AGACCCAAATGTTGTTCTAG+AGG 0.594011 8:+8686810 MsG0880042437.01.T01:CDS
GAACAATTGGACAAAGAGCA+CGG 0.595132 8:+8684740 MsG0880042437.01.T01:CDS
TTTGGATAAAAGCGACGGAA+GGG 0.595185 8:+8685009 MsG0880042437.01.T01:CDS
CACACACCAAATTTATCAGT+AGG 0.597903 8:-8685220 None:intergenic
GCTTACAGCCAACACCAGAA+AGG 0.602694 8:+8686164 MsG0880042437.01.T01:CDS
ATCTTGGCCAAATATGGCGG+TGG 0.606342 8:+8687219 MsG0880042437.01.T01:CDS
AAAAGATCCGCATCAAAGCA+AGG 0.616764 8:+8687476 MsG0880042437.01.T01:CDS
CCTGAAATGTAACATCTCCA+AGG 0.619020 8:-8684341 None:intergenic
TCAAGTTCATAACGATGGAA+GGG 0.619067 8:-8687441 None:intergenic
AACAATTGGACAAAGAGCAC+GGG 0.620967 8:+8684741 MsG0880042437.01.T01:CDS
TTCAAATGAAAATAAGCATG+AGG 0.623037 8:+8685075 MsG0880042437.01.T01:CDS
CCCTCAAAAGTGAATTAGAG+TGG 0.623689 8:-8686041 None:intergenic
GGAATAAGCTTAGAAGGCGG+TGG 0.624845 8:+8686987 MsG0880042437.01.T01:CDS
TGAGGAGTACTACTGGTGAA+AGG 0.629184 8:+8686297 MsG0880042437.01.T01:CDS
ACTCTGCTGAATACATGAGA+AGG 0.629297 8:-8685694 None:intergenic
TTATGAAGTTGGTAAGTAGG+AGG 0.629794 8:-8687242 None:intergenic
AGTACTACTGGTGAAAGGAG+TGG 0.642999 8:+8686302 MsG0880042437.01.T01:CDS
GATATCATTTATGTACTAAG+CGG 0.646482 8:+8686966 MsG0880042437.01.T01:CDS
TCTATGGAACGTGCTTTCAG+AGG 0.650247 8:+8684689 MsG0880042437.01.T01:CDS
AAATGAAAATAAGCATGAGG+AGG 0.663625 8:+8685078 MsG0880042437.01.T01:CDS
TTCATATGAACCAATACACA+AGG 0.666323 8:-8684969 None:intergenic
AAATTATGAAGACAAGCTTG+CGG 0.668821 8:+8685159 MsG0880042437.01.T01:CDS
AGAGCAGGTTCATCCCAGCA+TGG 0.669027 8:-8682309 None:intergenic
AGAATCTTGGCCAAATATGG+CGG 0.676230 8:+8687216 MsG0880042437.01.T01:CDS
TAACGATGGAAGGGTTCATG+CGG 0.677875 8:-8687432 None:intergenic
AAAGTGTGACGGTGTCATGT+TGG 0.678720 8:-8687766 None:intergenic
TTTGAGGGGAGAAGTTATCG+AGG 0.686347 8:+8686056 MsG0880042437.01.T01:CDS
TTTCGAAGTTTATACAAACG+AGG 0.687715 8:-8687825 None:intergenic
ACTTTATATTGAAAGTGTGA+CGG 0.689564 8:-8687777 None:intergenic
GTTGCAGGTTAACAGCAATG+AGG 0.717666 8:+8687378 MsG0880042437.01.T01:intron
AGCGGAATAAGCTTAGAAGG+CGG 0.733115 8:+8686984 MsG0880042437.01.T01:CDS
AGATCCGCATCAAAGCAAGG+TGG 0.749107 8:+8687479 MsG0880042437.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTCAATGAATATATAA+AGG - Chr8:8684434-8684453 None:intergenic 10.0%
!! TAAATAATTTCAATAAACAA+AGG - Chr8:8686931-8686950 None:intergenic 10.0%
!! AATAATAATGTGTTTGAAAA+AGG + Chr8:8687093-8687112 MsG0880042437.01.T01:intron 15.0%
!! ACATAAACACTTATATAATA+AGG + Chr8:8682853-8682872 MsG0880042437.01.T01:intron 15.0%
!! ATATTTGTAAAATATTTGTC+AGG + Chr8:8686256-8686275 MsG0880042437.01.T01:intron 15.0%
!! CATAAACACTTATATAATAA+GGG + Chr8:8682854-8682873 MsG0880042437.01.T01:intron 15.0%
!!! ATCTTTTGAACTTTTTTTAT+AGG + Chr8:8682946-8682965 MsG0880042437.01.T01:intron 15.0%
!!! TCTTTTGAACTTTTTTTATA+GGG + Chr8:8682947-8682966 MsG0880042437.01.T01:intron 15.0%
!! AAAAAAGAAATCAAGAAAGA+AGG + Chr8:8683249-8683268 MsG0880042437.01.T01:intron 20.0%
!! AAAAAGATAAATGAAAGAAG+TGG - Chr8:8684054-8684073 None:intergenic 20.0%
!! AAATAAGCTGAAACAATTTA+TGG + Chr8:8686548-8686567 MsG0880042437.01.T01:intron 20.0%
!! ATTAAAATTCACTTCTCTTA+AGG - Chr8:8685377-8685396 None:intergenic 20.0%
!! ATTATTCATAGATCAATCAA+TGG - Chr8:8683843-8683862 None:intergenic 20.0%
!! ATTTAAAAGTAAACCATTGA+AGG - Chr8:8684487-8684506 None:intergenic 20.0%
!! TAACAACTGAATTATTTATG+TGG + Chr8:8684364-8684383 MsG0880042437.01.T01:intron 20.0%
!! TACTAAAAAGTTTGTATCTA+TGG + Chr8:8687735-8687754 MsG0880042437.01.T01:three_prime_UTR 20.0%
!! TAGAAAAAAAACTGTATCAT+AGG - Chr8:8685272-8685291 None:intergenic 20.0%
!! TCAATTTAATGATGAACAAT+TGG + Chr8:8684727-8684746 MsG0880042437.01.T01:CDS 20.0%
!! TGAAATTCAACTTAAATTAG+TGG + Chr8:8687132-8687151 MsG0880042437.01.T01:intron 20.0%
!!! ATGTTTTCAGATAAGTTATA+TGG + Chr8:8683879-8683898 MsG0880042437.01.T01:intron 20.0%
!!! ATTAAAGACTGTTTATTTTG+AGG + Chr8:8682507-8682526 MsG0880042437.01.T01:CDS 20.0%
!!! GAAGTGAATTTTAATTTTAC+AGG + Chr8:8685382-8685401 MsG0880042437.01.T01:intron 20.0%
!!! GTTTTGTTAACAAAATAAAG+TGG - Chr8:8683142-8683161 None:intergenic 20.0%
!!! TCAATTAACAGATAACATTT+TGG + Chr8:8684782-8684801 MsG0880042437.01.T01:CDS 20.0%
!!! TCTATGAAGTTTTATTTAAG+AGG + Chr8:8685288-8685307 MsG0880042437.01.T01:intron 20.0%
!!! TTTTAATTTTACAGGCATTT+TGG + Chr8:8685390-8685409 MsG0880042437.01.T01:intron 20.0%
!!! TTTTCATAAACTATCTTGAA+GGG - Chr8:8682769-8682788 None:intergenic 20.0%
! AAAAGTTTGTATCTATGGAT+TGG + Chr8:8687740-8687759 MsG0880042437.01.T01:three_prime_UTR 25.0%
! AAATTATTCACCATAATGGT+TGG + Chr8:8685739-8685758 MsG0880042437.01.T01:intron 25.0%
! AATAAACACTATGGTATACA+TGG + Chr8:8683174-8683193 MsG0880042437.01.T01:intron 25.0%
! ACAAATGTAACAATTTGTGT+CGG - Chr8:8683338-8683357 None:intergenic 25.0%
! ACATAAATGATATCTTGATC+TGG - Chr8:8686960-8686979 None:intergenic 25.0%
! ACTCAAATTATTCACCATAA+TGG + Chr8:8685735-8685754 MsG0880042437.01.T01:intron 25.0%
! AGAGCATACTAAGAAATATA+GGG + Chr8:8685813-8685832 MsG0880042437.01.T01:intron 25.0%
! CTAGAGATAAATAAACACTA+TGG + Chr8:8683165-8683184 MsG0880042437.01.T01:intron 25.0%
! GAAGTAAATATTCACTCAAA+GGG - Chr8:8685770-8685789 None:intergenic 25.0%
! GAGTATTCAAAAAGTTGAAA+GGG - Chr8:8683076-8683095 None:intergenic 25.0%
! GATATCATTTATGTACTAAG+CGG + Chr8:8686966-8686985 MsG0880042437.01.T01:CDS 25.0%
! GTTAATTGAACATGAATAAC+CGG - Chr8:8684771-8684790 None:intergenic 25.0%
! TATATCCAGAATGGAATATT+TGG + Chr8:8683914-8683933 MsG0880042437.01.T01:intron 25.0%
! TATCTAAAGGAAACAAATGA+AGG - Chr8:8683683-8683702 None:intergenic 25.0%
! TGAAGTAAATATTCACTCAA+AGG - Chr8:8685771-8685790 None:intergenic 25.0%
! TGAGTATTCAAAAAGTTGAA+AGG - Chr8:8683077-8683096 None:intergenic 25.0%
! TTAGAATCCATTTCTGTTAA+AGG + Chr8:8685952-8685971 MsG0880042437.01.T01:intron 25.0%
! TTCAAATGAAAATAAGCATG+AGG + Chr8:8685075-8685094 MsG0880042437.01.T01:CDS 25.0%
! TTCTATGCAAAGACATAATT+AGG - Chr8:8684391-8684410 None:intergenic 25.0%
! TTGAATTTATGGAATCATTC+TGG + Chr8:8687164-8687183 MsG0880042437.01.T01:intron 25.0%
! TTGTTCATCATTAAATTGAC+TGG - Chr8:8684726-8684745 None:intergenic 25.0%
! TTTGATATGAAAACCTTCAA+TGG + Chr8:8684471-8684490 MsG0880042437.01.T01:intron 25.0%
!! AAGACAGACAAAATTTCTTT+TGG + Chr8:8684991-8685010 MsG0880042437.01.T01:CDS 25.0%
!! ACTTTATATTGAAAGTGTGA+CGG - Chr8:8687780-8687799 None:intergenic 25.0%
!! AGTCTAGTTTATCAATAGTT+TGG + Chr8:8687688-8687707 MsG0880042437.01.T01:three_prime_UTR 25.0%
!! ATTGAAGGTTTTCATATCAA+AGG - Chr8:8684472-8684491 None:intergenic 25.0%
!! CCTTTGAAAATAACTGTTAT+TGG + Chr8:8684876-8684895 MsG0880042437.01.T01:intron 25.0%
!! GTCTAGTTTATCAATAGTTT+GGG + Chr8:8687689-8687708 MsG0880042437.01.T01:three_prime_UTR 25.0%
!! GTTTTCATAAACTATCTTGA+AGG - Chr8:8682770-8682789 None:intergenic 25.0%
!! TAGTTTTCTAATGCAAATTC+TGG + Chr8:8686865-8686884 MsG0880042437.01.T01:intron 25.0%
!! TGATCAAAGTGGTTTTTATA+GGG + Chr8:8685135-8685154 MsG0880042437.01.T01:CDS 25.0%
!! TGTAATTTTCTTACCTCAAT+TGG - Chr8:8684000-8684019 None:intergenic 25.0%
!! TTGAATTGTTACTTGCTAAT+AGG - Chr8:8687589-8687608 None:intergenic 25.0%
!! TTGATCAAAGTGGTTTTTAT+AGG + Chr8:8685134-8685153 MsG0880042437.01.T01:CDS 25.0%
!!! AAGCAAGTAATTGTTTTGTA+CGG - Chr8:8685200-8685219 None:intergenic 25.0%
!!! ACAGCTTTATTAATCACTTA+TGG + Chr8:8686424-8686443 MsG0880042437.01.T01:intron 25.0%
!!! ATATTAGTCTGTTTCTAAAG+TGG + Chr8:8685870-8685889 MsG0880042437.01.T01:intron 25.0%
!!! CCAATAACAGTTATTTTCAA+AGG - Chr8:8684879-8684898 None:intergenic 25.0%
!!! GAACTTTTTTTATAGGGTTA+TGG + Chr8:8682953-8682972 MsG0880042437.01.T01:intron 25.0%
!!! GGATGTCTATTTTGAATTTA+TGG + Chr8:8687153-8687172 MsG0880042437.01.T01:intron 25.0%
!!! TAACATTTTGGAATTCAAAC+AGG + Chr8:8684794-8684813 MsG0880042437.01.T01:CDS 25.0%
!!! TCGTAATTCATTTTTATGAC+AGG + Chr8:8685595-8685614 MsG0880042437.01.T01:intron 25.0%
!!! TTGAGTTTTATCATGATCAA+GGG - Chr8:8686091-8686110 None:intergenic 25.0%
!!! TTTTTTTATAGGGTTATGGT+TGG + Chr8:8682957-8682976 MsG0880042437.01.T01:intron 25.0%
AAAGGTCAATCAATTGAGAA+GGG - Chr8:8686913-8686932 None:intergenic 30.0%
AAAGTCAATGTTGATCAAAG+TGG + Chr8:8685124-8685143 MsG0880042437.01.T01:CDS 30.0%
AAATGAAAATAAGCATGAGG+AGG + Chr8:8685078-8685097 MsG0880042437.01.T01:CDS 30.0%
AAATTATGAAGACAAGCTTG+CGG + Chr8:8685159-8685178 MsG0880042437.01.T01:CDS 30.0%
AACTATCAGACTTATGAAGT+TGG - Chr8:8687256-8687275 None:intergenic 30.0%
AAGTTGCCTGTAATTTAGAA+TGG - Chr8:8682408-8682427 None:intergenic 30.0%
AATTCAAGGAAAGAGAAGTT+TGG - Chr8:8687352-8687371 None:intergenic 30.0%
ACAAGTAAACAATGCATGAT+TGG + Chr8:8685316-8685335 MsG0880042437.01.T01:intron 30.0%
ACACTAAATCTACATTTGCA+TGG + Chr8:8683109-8683128 MsG0880042437.01.T01:intron 30.0%
ACCTGAAAATGTGTTTATAC+AGG - Chr8:8684231-8684250 None:intergenic 30.0%
AGTTGAAAAATTGTTGCCTA+TGG - Chr8:8684852-8684871 None:intergenic 30.0%
ATATCACTTGTGAGACTATT+TGG + Chr8:8682685-8682704 MsG0880042437.01.T01:intron 30.0%
ATTACTGATGTTTGTATGTC+TGG + Chr8:8683376-8683395 MsG0880042437.01.T01:intron 30.0%
ATTCAAAAAGTTGAAAGGGA+AGG - Chr8:8683072-8683091 None:intergenic 30.0%
CAAACATCAGTAATAGTTTG+AGG - Chr8:8683370-8683389 None:intergenic 30.0%
CAGAGCATACTAAGAAATAT+AGG + Chr8:8685812-8685831 MsG0880042437.01.T01:intron 30.0%
CCATGCATAGTAAAAACATT+AGG - Chr8:8687649-8687668 None:intergenic 30.0%
CGTTCAACAAAATCTGAAAA+CGG - Chr8:8686128-8686147 None:intergenic 30.0%
CTGGAATTCTGTGATTATAT+TGG + Chr8:8686717-8686736 MsG0880042437.01.T01:intron 30.0%
CTGTGACAATTGTTATCTAA+AGG - Chr8:8683696-8683715 None:intergenic 30.0%
CTTTGACCATTCTAAATTAC+AGG + Chr8:8682399-8682418 MsG0880042437.01.T01:intron 30.0%
GATTAAACCATAATTCTCCA+TGG - Chr8:8683523-8683542 None:intergenic 30.0%
GTGGTACAAATATCTCAAAT+TGG + Chr8:8685889-8685908 MsG0880042437.01.T01:intron 30.0%
GTTAATTGTTTGATCAAGTC+TGG - Chr8:8687535-8687554 None:intergenic 30.0%
GTTGAAAATGAAAAGCTAGA+TGG + Chr8:8682481-8682500 MsG0880042437.01.T01:CDS 30.0%
TAAATTACAGGCAACTTTCA+AGG + Chr8:8682411-8682430 MsG0880042437.01.T01:intron 30.0%
TATCACTTGTGAGACTATTT+GGG + Chr8:8682686-8682705 MsG0880042437.01.T01:intron 30.0%
TATCATGTCAACTTATTTGG+TGG + Chr8:8682537-8682556 MsG0880042437.01.T01:CDS 30.0%
TCCTATCATGTCAACTTATT+TGG + Chr8:8682534-8682553 MsG0880042437.01.T01:CDS 30.0%
TGGAGAAGTGAAGAAAAATA+TGG + Chr8:8682245-8682264 MsG0880042437.01.T01:CDS 30.0%
TGGCTTATTTGATCATATTG+AGG + Chr8:8682570-8682589 MsG0880042437.01.T01:CDS 30.0%
TTACCAAATTTCCAAACCAT+TGG - Chr8:8683735-8683754 None:intergenic 30.0%
TTCAAAAAGTTGAAAGGGAA+GGG - Chr8:8683071-8683090 None:intergenic 30.0%
TTCATATGAACCAATACACA+AGG - Chr8:8684972-8684991 None:intergenic 30.0%
TTGCTTCCTACTGATAAATT+TGG + Chr8:8685214-8685233 MsG0880042437.01.T01:CDS 30.0%
TTGTCAGCAAAAAAGGAAAT+TGG + Chr8:8684148-8684167 MsG0880042437.01.T01:intron 30.0%
TTTCGAAGTTTATACAAACG+AGG - Chr8:8687828-8687847 None:intergenic 30.0%
TTTCTTGCCTTTAACAGAAA+TGG - Chr8:8685962-8685981 None:intergenic 30.0%
! ACCAAATAAGTTGACATGAT+AGG - Chr8:8682538-8682557 None:intergenic 30.0%
! AGGTTAGTCAAGAAAATCTA+TGG + Chr8:8685098-8685117 MsG0880042437.01.T01:CDS 30.0%
! ATCTTCTGTTCTTGCATTTT+TGG - Chr8:8684670-8684689 None:intergenic 30.0%
! GAAATTTGGTAACTATGGAA+TGG + Chr8:8683743-8683762 MsG0880042437.01.T01:intron 30.0%
! GTAATTGGTTTCTTAACCTT+CGG + Chr8:8683804-8683823 MsG0880042437.01.T01:intron 30.0%
! GTTTGGAAATTTGGTAACTA+TGG + Chr8:8683738-8683757 MsG0880042437.01.T01:intron 30.0%
! TAATTGGTTTCTTAACCTTC+GGG + Chr8:8683805-8683824 MsG0880042437.01.T01:intron 30.0%
! TCAATTGAGTTTTGCAACAT+GGG + Chr8:8683782-8683801 MsG0880042437.01.T01:intron 30.0%
! TCCTGTATAAACACATTTTC+AGG + Chr8:8684227-8684246 MsG0880042437.01.T01:intron 30.0%
! TTTCTTTTGGATAAAAGCGA+CGG + Chr8:8685004-8685023 MsG0880042437.01.T01:CDS 30.0%
!! CAAACTTTTTAGTAGTAGCT+TGG - Chr8:8687729-8687748 None:intergenic 30.0%
!! CCTAATGTTTTTACTATGCA+TGG + Chr8:8687646-8687665 MsG0880042437.01.T01:three_prime_UTR 30.0%
!! GTTGAGTTTTATCATGATCA+AGG - Chr8:8686092-8686111 None:intergenic 30.0%
!! TTGCTGTTAGTTATTTCTCA+CGG - Chr8:8687053-8687072 None:intergenic 30.0%
!!! CAAGCAAAGAGTTTTATTGA+AGG - Chr8:8683220-8683239 None:intergenic 30.0%
!!! TCTAGCTTTTCATTTTCAAC+TGG - Chr8:8682481-8682500 None:intergenic 30.0%
AACACTATGGTATACATGGA+AGG + Chr8:8683178-8683197 MsG0880042437.01.T01:intron 35.0%
AACTGCTAGTGGTTTATGAA+TGG + Chr8:8683954-8683973 MsG0880042437.01.T01:intron 35.0%
AAGGGAAATTCCAACCATTA+TGG - Chr8:8685752-8685771 None:intergenic 35.0%
AAGGTCAATCAATTGAGAAG+GGG - Chr8:8686912-8686931 None:intergenic 35.0%
ATACAAGTGCACAATATGTG+TGG - Chr8:8685840-8685859 None:intergenic 35.0%
ATACCTAATGCAGGATAACT+GGG + Chr8:8687191-8687210 MsG0880042437.01.T01:intron 35.0%
ATCAAATGCGACAGTTATTG+TGG + Chr8:8684091-8684110 MsG0880042437.01.T01:intron 35.0%
ATGCAAGAACAGAAGATCTA+TGG + Chr8:8684673-8684692 MsG0880042437.01.T01:CDS 35.0%
ATTGAGGATAGAACTTCTAC+TGG + Chr8:8682586-8682605 MsG0880042437.01.T01:CDS 35.0%
CAAAGGTCAATCAATTGAGA+AGG - Chr8:8686914-8686933 None:intergenic 35.0%
CACACACCAAATTTATCAGT+AGG - Chr8:8685223-8685242 None:intergenic 35.0%
CAGATTGATAGAAATGTTGC+AGG - Chr8:8684580-8684599 None:intergenic 35.0%
CATAATCTGAATGCAACTTC+TGG + Chr8:8686698-8686717 MsG0880042437.01.T01:intron 35.0%
CCAACATCTTATATCCAGAA+TGG + Chr8:8683905-8683924 MsG0880042437.01.T01:intron 35.0%
CCATTCTGGATATAAGATGT+TGG - Chr8:8683908-8683927 None:intergenic 35.0%
CTCAAACAAGTCAATCCAAA+CGG - Chr8:8682653-8682672 None:intergenic 35.0%
CTCACAAGTGATATGTTAGT+AGG - Chr8:8682679-8682698 None:intergenic 35.0%
CTGCTTATATAGCTGTAATG+AGG + Chr8:8686279-8686298 MsG0880042437.01.T01:CDS 35.0%
CTTTATACTGTTTGTGCAGA+CGG + Chr8:8685989-8686008 MsG0880042437.01.T01:intron 35.0%
GAAAGAATCTTGGCCAAATA+TGG + Chr8:8687213-8687232 MsG0880042437.01.T01:CDS 35.0%
GAACCAATACACAAGGTTAT+CGG - Chr8:8684965-8684984 None:intergenic 35.0%
GACAAAATTTACACAAGCGA+TGG - Chr8:8683417-8683436 None:intergenic 35.0%
GGAAAAATCACATCCAATTG+AGG + Chr8:8683984-8684003 MsG0880042437.01.T01:intron 35.0%
GTCACTATAGATAGATGTTG+AGG - Chr8:8685569-8685588 None:intergenic 35.0%
GTCATCTTTGCTTATGTTGA+TGG + Chr8:8685453-8685472 MsG0880042437.01.T01:CDS 35.0%
TAAAGCTGTTTAGCTAGTCA+AGG - Chr8:8686413-8686432 None:intergenic 35.0%
TACATACATACCTTAAGAGC+AGG - Chr8:8682327-8682346 None:intergenic 35.0%
TAGATAGATGTTGAGGTCAT+TGG - Chr8:8685562-8685581 None:intergenic 35.0%
TCAAAACTAACATGCACCAT+AGG + Chr8:8684833-8684852 MsG0880042437.01.T01:intron 35.0%
TCAACACAGCATAAGAAGAT+TGG - Chr8:8682924-8682943 None:intergenic 35.0%
TCAAGTTCATAACGATGGAA+GGG - Chr8:8687444-8687463 None:intergenic 35.0%
TGACTCCAAATATTCCATTC+TGG - Chr8:8683922-8683941 None:intergenic 35.0%
TGGTTATAAATCAAACCCGA+AGG - Chr8:8683823-8683842 None:intergenic 35.0%
TTCAATTCATTCACCGAATC+TGG - Chr8:8685659-8685678 None:intergenic 35.0%
TTGAACAGCACTTATGTTGA+TGG + Chr8:8682225-8682244 MsG0880042437.01.T01:CDS 35.0%
! AAGAAGATGTTTTCCATGCT+GGG + Chr8:8682296-8682315 MsG0880042437.01.T01:CDS 35.0%
! ACACTGATGTTTTGCAAGAA+AGG + Chr8:8686354-8686373 MsG0880042437.01.T01:CDS 35.0%
! AGTTTTGCAACATGGGTAAT+TGG + Chr8:8683789-8683808 MsG0880042437.01.T01:intron 35.0%
! ATTTGGTAACTATGGAATGG+TGG + Chr8:8683746-8683765 MsG0880042437.01.T01:intron 35.0%
! CACTGATGTTTTGCAAGAAA+GGG + Chr8:8686355-8686374 MsG0880042437.01.T01:CDS 35.0%
! CTCAATTGAGTTTTGCAACA+TGG + Chr8:8683781-8683800 MsG0880042437.01.T01:intron 35.0%
! GTATTCTTTAGGGGGAAAAA+AGG - Chr8:8686201-8686220 None:intergenic 35.0%
! TACGTTCAAGTTCATAACGA+TGG - Chr8:8687449-8687468 None:intergenic 35.0%
! TCACCAATGGTTTGGAAATT+TGG + Chr8:8683729-8683748 MsG0880042437.01.T01:intron 35.0%
! TTCAAGTTCATAACGATGGA+AGG - Chr8:8687445-8687464 None:intergenic 35.0%
! TTTCTTCTAGAAACTGCTAG+TGG + Chr8:8683943-8683962 MsG0880042437.01.T01:intron 35.0%
! TTTTGTCTTTGACATCACCT+AGG + Chr8:8683430-8683449 MsG0880042437.01.T01:intron 35.0%
!! ACCACTCTAATTCACTTTTG+AGG + Chr8:8686040-8686059 MsG0880042437.01.T01:CDS 35.0%
!! AGAACCTCTAGAACAACATT+TGG - Chr8:8686817-8686836 None:intergenic 35.0%
!! CACTCTAATTCACTTTTGAG+GGG + Chr8:8686042-8686061 MsG0880042437.01.T01:CDS 35.0%
!! CCACTCTAATTCACTTTTGA+GGG + Chr8:8686041-8686060 MsG0880042437.01.T01:CDS 35.0%
!! GAACCTCTAGAACAACATTT+GGG - Chr8:8686816-8686835 None:intergenic 35.0%
!! GAATCTTTTGTTGTCTGATG+AGG + Chr8:8686837-8686856 MsG0880042437.01.T01:CDS 35.0%
!! GACTTATGAAGTTGGTAAGT+AGG - Chr8:8687248-8687267 None:intergenic 35.0%
!! GTTTTGTTATGAACTCATGC+AGG + Chr8:8686769-8686788 MsG0880042437.01.T01:intron 35.0%
!! TTAGGTTGGGATTCTATATC+TGG + Chr8:8686012-8686031 MsG0880042437.01.T01:CDS 35.0%
!! TTATGAAGTTGGTAAGTAGG+AGG - Chr8:8687245-8687264 None:intergenic 35.0%
!!! TTCCTTTTTTGCTGACAAAG+TGG - Chr8:8684146-8684165 None:intergenic 35.0%
AAAAGATCCGCATCAAAGCA+AGG + Chr8:8687476-8687495 MsG0880042437.01.T01:CDS 40.0%
AAAGGGAAGGGAATTCACAT+TGG - Chr8:8683059-8683078 None:intergenic 40.0%
AAATGCAGAGAAAGCTGAGT+TGG + Chr8:8687288-8687307 MsG0880042437.01.T01:intron 40.0%
AACTGCAGTCAAATGGTTGA+AGG + Chr8:8687010-8687029 MsG0880042437.01.T01:CDS 40.0%
AATGCGACAGTTATTGTGGA+CGG + Chr8:8684095-8684114 MsG0880042437.01.T01:intron 40.0%
ACCGTTATGTTGAACCAGTT+CGG - Chr8:8685044-8685063 None:intergenic 40.0%
ACTCTGCTGAATACATGAGA+AGG - Chr8:8685697-8685716 None:intergenic 40.0%
AGAAGGAAATGATCCATACG+AGG + Chr8:8683266-8683285 MsG0880042437.01.T01:intron 40.0%
AGAATCTTGGCCAAATATGG+CGG + Chr8:8687216-8687235 MsG0880042437.01.T01:CDS 40.0%
AGAATGTTGCAGAGTTACCT+TGG + Chr8:8684324-8684343 MsG0880042437.01.T01:CDS 40.0%
AGACCCAAATGTTGTTCTAG+AGG + Chr8:8686810-8686829 MsG0880042437.01.T01:CDS 40.0%
AGGCTTGCATATTACCTTTC+TGG - Chr8:8686181-8686200 None:intergenic 40.0%
CATAAGTCTGATAGTTCCAC+TGG + Chr8:8687260-8687279 MsG0880042437.01.T01:CDS 40.0%
CATACTCTTTGCTTCTTTGC+AGG - Chr8:8683592-8683611 None:intergenic 40.0%
CCCTCAAAAGTGAATTAGAG+TGG - Chr8:8686044-8686063 None:intergenic 40.0%
CCTGAAATGTAACATCTCCA+AGG - Chr8:8684344-8684363 None:intergenic 40.0%
CCTGCAACATCATGAATTCA+AGG - Chr8:8687366-8687385 None:intergenic 40.0%
CCTTGAATTCATGATGTTGC+AGG + Chr8:8687363-8687382 MsG0880042437.01.T01:intron 40.0%
CCTTGGAGATGTTACATTTC+AGG + Chr8:8684341-8684360 MsG0880042437.01.T01:CDS 40.0%
CTAAGCGGAATAAGCTTAGA+AGG + Chr8:8686981-8687000 MsG0880042437.01.T01:CDS 40.0%
CTATGGTATACATGGAAGGA+AGG + Chr8:8683182-8683201 MsG0880042437.01.T01:intron 40.0%
CTCATGTATTCAGCAGAGTA+AGG + Chr8:8685698-8685717 MsG0880042437.01.T01:intron 40.0%
CTCCACTTTGTCAGCAAAAA+AGG + Chr8:8684141-8684160 MsG0880042437.01.T01:intron 40.0%
GAACAATTGGACAAAGAGCA+CGG + Chr8:8684740-8684759 MsG0880042437.01.T01:CDS 40.0%
GACAATGCAGTTAACTCTGA+TGG - Chr8:8682451-8682470 None:intergenic 40.0%
GATACCTAATGCAGGATAAC+TGG + Chr8:8687190-8687209 MsG0880042437.01.T01:intron 40.0%
GCTGTTGGAAAAAGTGATCA+GGG + Chr8:8682990-8683009 MsG0880042437.01.T01:intron 40.0%
GGATAACTGGGAAAGAATCT+TGG + Chr8:8687203-8687222 MsG0880042437.01.T01:intron 40.0%
GTTCCGATAACCTTGTGTAT+TGG + Chr8:8684959-8684978 MsG0880042437.01.T01:CDS 40.0%
GTTGGTGTATATTGTGCTGT+TGG + Chr8:8682975-8682994 MsG0880042437.01.T01:intron 40.0%
TACGCATTTATGAGACCGTT+TGG + Chr8:8682635-8682654 MsG0880042437.01.T01:CDS 40.0%
TATGGTCACAACACAGTTTG+AGG + Chr8:8682263-8682282 MsG0880042437.01.T01:CDS 40.0%
TGAGGTCATTGGAGAAAGTA+TGG - Chr8:8685551-8685570 None:intergenic 40.0%
TGCTGTTGGAAAAAGTGATC+AGG + Chr8:8682989-8683008 MsG0880042437.01.T01:intron 40.0%
TGGTTTATGAATGGACGCAT+TGG + Chr8:8683963-8683982 MsG0880042437.01.T01:intron 40.0%
TTAGGAATATCCTAGTCTGC+TGG - Chr8:8687631-8687650 None:intergenic 40.0%
TTCATTCACCGAATCTGGAA+TGG - Chr8:8685654-8685673 None:intergenic 40.0%
TTTCCCAGTTATCCTGCATT+AGG - Chr8:8687197-8687216 None:intergenic 40.0%
TTTGGATAAAAGCGACGGAA+GGG + Chr8:8685009-8685028 MsG0880042437.01.T01:CDS 40.0%
! AACAATTGGACAAAGAGCAC+GGG + Chr8:8684741-8684760 MsG0880042437.01.T01:CDS 40.0%
! ATGTTTTGCAAGAAAGGGAC+AGG + Chr8:8686360-8686379 MsG0880042437.01.T01:CDS 40.0%
! CAAGAAGATGTTTTCCATGC+TGG + Chr8:8682295-8682314 MsG0880042437.01.T01:CDS 40.0%
! GCATATTACCTTTCTGGTGT+TGG - Chr8:8686175-8686194 None:intergenic 40.0%
! TATTTGGTGGCTGTTGTTGT+TGG + Chr8:8682550-8682569 MsG0880042437.01.T01:CDS 40.0%
! TCCGAACTGGTTCAACATAA+CGG + Chr8:8685040-8685059 MsG0880042437.01.T01:CDS 40.0%
! TCTCTGCATTTTCTTACCAG+TGG - Chr8:8687279-8687298 None:intergenic 40.0%
! TCTGGTTTGATACCTAATGC+AGG + Chr8:8687182-8687201 MsG0880042437.01.T01:intron 40.0%
! TTTACAGGCATTTTGGACGA+CGG + Chr8:8685397-8685416 MsG0880042437.01.T01:intron 40.0%
! TTTTGGATAAAAGCGACGGA+AGG + Chr8:8685008-8685027 MsG0880042437.01.T01:CDS 40.0%
!! AAGGGTTGATATATCCGAAC+TGG + Chr8:8685027-8685046 MsG0880042437.01.T01:CDS 40.0%
ACTAGATTCCGCTTAGGAAG+TGG - Chr8:8683474-8683493 None:intergenic 45.0%
ACTGCAACTAGATTCCGCTT+AGG - Chr8:8683480-8683499 None:intergenic 45.0%
AGCGGAATAAGCTTAGAAGG+CGG + Chr8:8686984-8687003 MsG0880042437.01.T01:CDS 45.0%
AGTACTACTGGTGAAAGGAG+TGG + Chr8:8686302-8686321 MsG0880042437.01.T01:CDS 45.0%
CAAGGAAAGAGAAGTTTGGC+TGG - Chr8:8687348-8687367 None:intergenic 45.0%
CAATCCACCTTGCTTTGATG+CGG - Chr8:8687486-8687505 None:intergenic 45.0%
CACTTGTGAGACTATTTGGG+AGG + Chr8:8682689-8682708 MsG0880042437.01.T01:intron 45.0%
CATTGACGCCATTCCAGATT+CGG + Chr8:8685643-8685662 MsG0880042437.01.T01:CDS 45.0%
CTCATGAAGTAGCTCACCAA+TGG + Chr8:8683716-8683735 MsG0880042437.01.T01:intron 45.0%
GAAGTAGCTCACCAATGGTT+TGG + Chr8:8683721-8683740 MsG0880042437.01.T01:intron 45.0%
GAGACTATTTGGGAGGCTTA+TGG + Chr8:8682696-8682715 MsG0880042437.01.T01:intron 45.0%
GATGCTGTCAGCTATGAGAA+AGG + Chr8:8684288-8684307 MsG0880042437.01.T01:CDS 45.0%
GTTGCAGGTTAACAGCAATG+AGG + Chr8:8687378-8687397 MsG0880042437.01.T01:intron 45.0%
TAACGATGGAAGGGTTCATG+CGG - Chr8:8687435-8687454 None:intergenic 45.0%
TACTGGTGAAAGGAGTGGAT+TGG + Chr8:8686307-8686326 MsG0880042437.01.T01:CDS 45.0%
TACTGTTTGTGCAGACGGTT+AGG + Chr8:8685994-8686013 MsG0880042437.01.T01:intron 45.0%
TCTATGGAACGTGCTTTCAG+AGG + Chr8:8684689-8684708 MsG0880042437.01.T01:CDS 45.0%
TGCCTTATCCACTTCCTAAG+CGG + Chr8:8683463-8683482 MsG0880042437.01.T01:intron 45.0%
TTCCGCTTAGGAAGTGGATA+AGG - Chr8:8683468-8683487 None:intergenic 45.0%
TTGGCTGGACTGAAGCAAAT+TGG - Chr8:8687333-8687352 None:intergenic 45.0%
TTTGAGGGGAGAAGTTATCG+AGG + Chr8:8686056-8686075 MsG0880042437.01.T01:CDS 45.0%
TTTGTGCAGACGGTTAGGTT+GGG + Chr8:8685999-8686018 MsG0880042437.01.T01:intron 45.0%
! CAGTCGCGATTCCTTTTATC+CGG + Chr8:8684911-8684930 MsG0880042437.01.T01:intron 45.0%
!! AAAGTGTGACGGTGTCATGT+TGG - Chr8:8687769-8687788 None:intergenic 45.0%
!! AACGTGCTTTCAGAGGTATC+TGG + Chr8:8684696-8684715 MsG0880042437.01.T01:CDS 45.0%
!! GCTGTAATGAGGAGTACTAC+TGG + Chr8:8686290-8686309 MsG0880042437.01.T01:CDS 45.0%
!! TAAGGCACTGAGAAGTACCT+AGG - Chr8:8683450-8683469 None:intergenic 45.0%
!! TGAGGAGTACTACTGGTGAA+AGG + Chr8:8686297-8686316 MsG0880042437.01.T01:CDS 45.0%
!! TGTCGGTGTCGTGTCAATAT+CGG - Chr8:8683321-8683340 None:intergenic 45.0%
ACAAGCTTGCGGTTCGATTG+AGG + Chr8:8685170-8685189 MsG0880042437.01.T01:CDS 50.0%
AGATCCGCATCAAAGCAAGG+TGG + Chr8:8687479-8687498 MsG0880042437.01.T01:CDS 50.0%
ATCTTGGCCAAATATGGCGG+TGG + Chr8:8687219-8687238 MsG0880042437.01.T01:CDS 50.0%
ATGGCTCCAGCAGAAAACTC+AGG - Chr8:8683504-8683523 None:intergenic 50.0%
CAGGTGCAGAGTGCAATTCA+TGG - Chr8:8683573-8683592 None:intergenic 50.0%
CATACGAGGTCCTATCACCA+TGG + Chr8:8683280-8683299 MsG0880042437.01.T01:intron 50.0%
CATGGTGATAGGACCTCGTA+TGG - Chr8:8683282-8683301 None:intergenic 50.0%
CGACAGTTATTGTGGACGGA+GGG + Chr8:8684099-8684118 MsG0880042437.01.T01:intron 50.0%
CGGAACAATCCACTGTCCAT+CGG - Chr8:8684945-8684964 None:intergenic 50.0%
CGGCATGAAGACCGGATAAA+AGG - Chr8:8684925-8684944 None:intergenic 50.0%
CTGGGATGAACCTGCTCTTA+AGG + Chr8:8682314-8682333 MsG0880042437.01.T01:CDS 50.0%
GCTGGAGCCATGGAGAATTA+TGG + Chr8:8683513-8683532 MsG0880042437.01.T01:intron 50.0%
GCTTACAGCCAACACCAGAA+AGG + Chr8:8686164-8686183 MsG0880042437.01.T01:CDS 50.0%
GGAATAAGCTTAGAAGGCGG+TGG + Chr8:8686987-8687006 MsG0880042437.01.T01:CDS 50.0%
GGACACACTTCCATGGTGAT+AGG - Chr8:8683293-8683312 None:intergenic 50.0%
GGGAGAAGTTATCGAGGCAT+TGG + Chr8:8686062-8686081 MsG0880042437.01.T01:CDS 50.0%
GTCGTGTCAATATCGGACAC+TGG - Chr8:8683314-8683333 None:intergenic 50.0%
GTGATCAGGGAAGCTTGCAT+TGG + Chr8:8683003-8683022 MsG0880042437.01.T01:intron 50.0%
GTTTGTGCAGACGGTTAGGT+TGG + Chr8:8685998-8686017 MsG0880042437.01.T01:intron 50.0%
TTATCCGGTCTTCATGCCGA+TGG + Chr8:8684926-8684945 MsG0880042437.01.T01:CDS 50.0%
! CGAATCTGGAATGGCGTCAA+TGG - Chr8:8685645-8685664 None:intergenic 50.0%
! GACAAAGAGCACGGGATATC+CGG + Chr8:8684749-8684768 MsG0880042437.01.T01:CDS 50.0%
! GCAGTTCCTGAGTTTTCTGC+TGG + Chr8:8683495-8683514 MsG0880042437.01.T01:intron 50.0%
! TGAGTTTTCTGCTGGAGCCA+TGG + Chr8:8683503-8683522 MsG0880042437.01.T01:intron 50.0%
! TGCAGAGAAAGCTGAGTTGG+TGG + Chr8:8687291-8687310 MsG0880042437.01.T01:intron 50.0%
AGAGCAGGTTCATCCCAGCA+TGG - Chr8:8682312-8682331 None:intergenic 55.0%
CGACGGAAACGCTCTTTGTC+AGG + Chr8:8685414-8685433 MsG0880042437.01.T01:CDS 55.0%
CTGTCCATCGGCATGAAGAC+CGG - Chr8:8684933-8684952 None:intergenic 55.0%
GCGACAGTTATTGTGGACGG+AGG + Chr8:8684098-8684117 MsG0880042437.01.T01:intron 55.0%
GCGGTGGAACTGCAGTCAAA+TGG + Chr8:8687003-8687022 MsG0880042437.01.T01:CDS 55.0%
GGACACTGGACACACTTCCA+TGG - Chr8:8683300-8683319 None:intergenic 55.0%
GTCTTCATGCCGATGGACAG+TGG + Chr8:8684933-8684952 MsG0880042437.01.T01:CDS 55.0%
GTGTTCTGCTCCAGCAGACT+AGG + Chr8:8687618-8687637 MsG0880042437.01.T01:three_prime_UTR 55.0%
TAGGAGGCCACCGCCATATT+TGG - Chr8:8687229-8687248 None:intergenic 55.0%
GATGGAAGGGTTCATGCGGC+TGG - Chr8:8687431-8687450 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 8682225 8687861 8682225 ID=MsG0880042437.01;Name=MsG0880042437.01
Chr8 mRNA 8682225 8687861 8682225 ID=MsG0880042437.01.T01;Parent=MsG0880042437.01;Name=MsG0880042437.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0.91|0.84|1|0.91|0.92|13|294|639
Chr8 exon 8682225 8682335 8682225 ID=MsG0880042437.01.T01:exon:4008;Parent=MsG0880042437.01.T01
Chr8 exon 8682421 8682693 8682421 ID=MsG0880042437.01.T01:exon:4009;Parent=MsG0880042437.01.T01
Chr8 exon 8684249 8684362 8684249 ID=MsG0880042437.01.T01:exon:4010;Parent=MsG0880042437.01.T01
Chr8 exon 8684633 8684815 8684633 ID=MsG0880042437.01.T01:exon:4011;Parent=MsG0880042437.01.T01
Chr8 exon 8684914 8685235 8684914 ID=MsG0880042437.01.T01:exon:4012;Parent=MsG0880042437.01.T01
Chr8 exon 8685404 8685525 8685404 ID=MsG0880042437.01.T01:exon:4013;Parent=MsG0880042437.01.T01
Chr8 exon 8685617 8685714 8685617 ID=MsG0880042437.01.T01:exon:4014;Parent=MsG0880042437.01.T01
Chr8 exon 8686008 8686185 8686008 ID=MsG0880042437.01.T01:exon:4015;Parent=MsG0880042437.01.T01
Chr8 exon 8686278 8686389 8686278 ID=MsG0880042437.01.T01:exon:4016;Parent=MsG0880042437.01.T01
Chr8 exon 8686791 8686858 8686791 ID=MsG0880042437.01.T01:exon:4017;Parent=MsG0880042437.01.T01
Chr8 exon 8686954 8687031 8686954 ID=MsG0880042437.01.T01:exon:4018;Parent=MsG0880042437.01.T01
Chr8 exon 8687204 8687281 8687204 ID=MsG0880042437.01.T01:exon:4019;Parent=MsG0880042437.01.T01
Chr8 exon 8687385 8687861 8687385 ID=MsG0880042437.01.T01:exon:4020;Parent=MsG0880042437.01.T01
Chr8 CDS 8682225 8682335 8682225 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 CDS 8682421 8682693 8682421 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 CDS 8684249 8684362 8684249 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 CDS 8684633 8684815 8684633 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 CDS 8684914 8685235 8684914 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 CDS 8685404 8685525 8685404 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 CDS 8685617 8685714 8685617 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 CDS 8686008 8686185 8686008 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 CDS 8686278 8686389 8686278 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 CDS 8686791 8686858 8686791 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 CDS 8686954 8687031 8686954 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 CDS 8687204 8687281 8687204 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 CDS 8687385 8687567 8687385 ID=MsG0880042437.01.T01:cds;Parent=MsG0880042437.01.T01
Chr8 three_prime_UTR 8687568 8687861 8687568 ID=MsG0880042437.01.T01:three_prime_utr;Parent=MsG0880042437.01.T01
Gene Sequence

>MsG0880042437.01.T01

TTGAACAGCACTTATGTTGATGGAGAAGTGAAGAAAAATATGGTCACAACACAGTTTGAGGCAGTAGATGCAAGAAGATGTTTTCCATGCTGGGATGAACCTGCTCTTAAGGCAACTTTCAAGGTAACACTTACTATGCCATCAGAGTTAACTGCATTGTCTAATATGCCAGTTGAAAATGAAAAGCTAGATGGTGAATTAAAGACTGTTTATTTTGAGGAGTCTCCTATCATGTCAACTTATTTGGTGGCTGTTGTTGTTGGCTTATTTGATCATATTGAGGATAGAACTTCTACTGGTACGCAAATGAGTTTATCTACTAGTATACGCATTTATGAGACCGTTTGGATTGACTTGTTTGAGTTACCTACTAACATATCACTTGTAGAAATATATCATGCAAGATCAGTTATTGAAATTTTTGATGCTGTCAGCTATGAGAAAGGATCTTCTGTAATTAGAATGTTGCAGAGTTACCTTGGAGATGTTACATTTCAGAAATCATTAAGCACATATATAAGAAAATATCAAGCCAAAAATGCAAGAACAGAAGATCTATGGAACGTGCTTTCAGAGGTATCTGGTGAGCCAGTCAATTTAATGATGAACAATTGGACAAAGAGCACGGGATATCCGGTTATTCATGTTCAATTAACAGATAACATTTTGGAATTCAAACAGTCGCGATTCCTTTTATCCGGTCTTCATGCCGATGGACAGTGGATTGTTCCGATAACCTTGTGTATTGGTTCATATGAAAGACAGACAAAATTTCTTTTGGATAAAAGCGACGGAAGGGTTGATATATCCGAACTGGTTCAACATAACGGTGATGATGTAAATTCAAATGAAAATAAGCATGAGGAGGTTAGTCAAGAAAATCTATGGATCAAAGTCAATGTTGATCAAAGTGGTTTTTATAGGGTAAATTATGAAGACAAGCTTGCGGTTCGATTGAGGAAAGCCGTACAAAACAATTACTTGCTTCCTACTGATAAATTTGGCATTTTGGACGACGGAAACGCTCTTTGTCAGGCTTGTGAACAGTCACTGTCATCTTTGCTTATGTTGATGGATGTTTATAGAAAAGAGTTAGATTATGTTATTGTATCGAGACTGATCGATGTTTGTTATGATGTTCTGAAAATCGCCATTGACGCCATTCCAGATTCGGTGAATGAATTGAAGCAATATTTTATCAGCCTTCTCATGTATTCAGCAGAACGGTTAGGTTGGGATTCTATATCTGGCGAAGACCACTCTAATTCACTTTTGAGGGGAGAAGTTATCGAGGCATTGGCTACCCTTGATCATGATAAAACTCAACATGAAGCAATGCGCCGTTTTCAGATTTTGTTGAACGACAGAAACACTTCTCTGCTTACAGCCAACACCAGAAAGGCTGCTTATATAGCTGTAATGAGGAGTACTACTGGTGAAAGGAGTGGATTGGAGTCTCTGTTCAGTTTCTATAAGAACACTGATGTTTTGCAAGAAAGGGACAGGATATTGCGCTGTATCGCATCAAGTGCAGACCCAAATGTTGTTCTAGAGGTTCTGAATCTTTTGTTGTCTGATGAGATTCCAGATCAAGATATCATTTATGTACTAAGCGGAATAAGCTTAGAAGGCGGTGGAACTGCAGTCAAATGGTTGAAGGATAACTGGGAAAGAATCTTGGCCAAATATGGCGGTGGCCTCCTACTTACCAACTTCATAAGTCTGATAGTTCCACTGGTTAACAGCAATGAGGAAGCAGATGACATAGAAGCATTTTTTGCCAGCCGCATGAACCCTTCCATCGTTATGAACTTGAACGTAAGCATCGAAAAGATCCGCATCAAAGCAAGGTGGATTGAGAGTGTGAAGCAAGAACACTCTCTGCCAGACTTGATCAAACAATTAACTCACAGAAAATGA
Protein sequence

>MsG0880042437.01.T01

LNSTYVDGEVKKNMVTTQFEAVDARRCFPCWDEPALKATFKVTLTMPSELTALSNMPVENEKLDGELKTVYFEESPIMSTYLVAVVVGLFDHIEDRTSTGTQMSLSTSIRIYETVWIDLFELPTNISLVEIYHARSVIEIFDAVSYEKGSSVIRMLQSYLGDVTFQKSLSTYIRKYQAKNARTEDLWNVLSEVSGEPVNLMMNNWTKSTGYPVIHVQLTDNILEFKQSRFLLSGLHADGQWIVPITLCIGSYERQTKFLLDKSDGRVDISELVQHNGDDVNSNENKHEEVSQENLWIKVNVDQSGFYRVNYEDKLAVRLRKAVQNNYLLPTDKFGILDDGNALCQACEQSLSSLLMLMDVYRKELDYVIVSRLIDVCYDVLKIAIDAIPDSVNELKQYFISLLMYSAERLGWDSISGEDHSNSLLRGEVIEALATLDHDKTQHEAMRRFQILLNDRNTSLLTANTRKAAYIAVMRSTTGERSGLESLFSFYKNTDVLQERDRILRCIASSADPNVVLEVLNLLLSDEIPDQDIIYVLSGISLEGGGTAVKWLKDNWERILAKYGGGLLLTNFISLIVPLVNSNEEADDIEAFFASRMNPSIVMNLNVSIEKIRIKARWIESVKQEHSLPDLIKQLTHRK*