Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030606.01.T01 | XP_013450849.1 | 96.986 | 365 | 10 | 1 | 1 | 364 | 1 | 365 | 0 | 700 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030606.01.T01 | Q94JU2 | 46.361 | 371 | 175 | 7 | 1 | 354 | 1 | 364 | 8.20E-106 | 318 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030606.01.T01 | A0A072U715 | 96.986 | 365 | 10 | 1 | 1 | 364 | 1 | 365 | 0.0 | 700 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0280011424.01 | MsG0680030606.01 | 0.800357 | 1.496874e-48 | 6.955737e-46 |
| MsG0380014756.01 | MsG0680030606.01 | 0.805496 | 1.297835e-49 | 6.876388e-47 |
| MsG0480019384.01 | MsG0680030606.01 | 0.814112 | 1.818153e-51 | 1.209217e-48 |
| MsG0580025564.01 | MsG0680030606.01 | 0.808057 | 3.733264e-50 | 2.113235e-47 |
| MsG0580025644.01 | MsG0680030606.01 | 0.810658 | 1.033020e-50 | 6.263648e-48 |
| MsG0380017014.01 | MsG0680030606.01 | -0.826121 | 3.228203e-54 | 3.000166e-51 |
| MsG0380017793.01 | MsG0680030606.01 | 0.811599 | 6.458775e-51 | 4.014828e-48 |
| MsG0680030605.01 | MsG0680030606.01 | 0.873572 | 1.325735e-67 | 5.781235e-64 |
| MsG0680030606.01 | MsG0680030607.01 | 0.852797 | 3.646034e-61 | 7.709455e-58 |
| MsG0680030606.01 | MsG0680030608.01 | 0.807134 | 5.861975e-50 | 3.239250e-47 |
| MsG0680030606.01 | MsG0680030907.01 | 0.804809 | 1.807507e-49 | 9.409865e-47 |
| MsG0680030606.01 | MsG0780040235.01 | 0.809520 | 1.817245e-50 | 1.069277e-47 |
| MsG0680030606.01 | MsG0880042437.01 | 0.835880 | 1.296754e-56 | 1.606902e-53 |
| MsG0680030606.01 | MsG0880042659.01 | 0.815205 | 1.041560e-51 | 7.134862e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030606.01.T01 | MTR_6g007757 | 96.986 | 365 | 10 | 1 | 1 | 364 | 1 | 365 | 0.0 | 700 |
| MsG0680030606.01.T01 | MTR_6g007743 | 80.663 | 362 | 69 | 1 | 1 | 362 | 1 | 361 | 0.0 | 582 |
| MsG0680030606.01.T01 | MTR_6g007747 | 80.495 | 364 | 68 | 1 | 1 | 364 | 1 | 361 | 0.0 | 569 |
| MsG0680030606.01.T01 | MTR_6g007750 | 80.328 | 366 | 70 | 2 | 1 | 364 | 1 | 366 | 0.0 | 558 |
| MsG0680030606.01.T01 | MTR_6g007740 | 78.512 | 363 | 77 | 1 | 1 | 363 | 1 | 362 | 0.0 | 545 |
| MsG0680030606.01.T01 | MTR_6g007753 | 78.035 | 346 | 70 | 3 | 24 | 364 | 303 | 647 | 0.0 | 520 |
| MsG0680030606.01.T01 | MTR_6g007753 | 68.681 | 364 | 73 | 2 | 1 | 364 | 1 | 323 | 3.74e-164 | 474 |
| MsG0680030606.01.T01 | MTR_6g007757 | 96.875 | 256 | 8 | 0 | 1 | 256 | 1 | 256 | 1.36e-177 | 494 |
| MsG0680030606.01.T01 | MTR_0103s0090 | 55.707 | 368 | 155 | 4 | 1 | 364 | 1 | 364 | 6.82e-141 | 404 |
| MsG0680030606.01.T01 | MTR_6g007760 | 56.592 | 311 | 130 | 3 | 1 | 308 | 1 | 309 | 7.42e-115 | 337 |
| MsG0680030606.01.T01 | MTR_0103s0090 | 57.455 | 275 | 111 | 2 | 94 | 364 | 1 | 273 | 7.41e-109 | 320 |
| MsG0680030606.01.T01 | MTR_1g014510 | 43.590 | 351 | 187 | 5 | 8 | 349 | 7 | 355 | 6.19e-94 | 288 |
| MsG0680030606.01.T01 | MTR_5g034980 | 45.062 | 324 | 158 | 3 | 17 | 329 | 12 | 326 | 4.47e-84 | 259 |
| MsG0680030606.01.T01 | MTR_4g106720 | 40.401 | 349 | 201 | 4 | 7 | 350 | 6 | 352 | 7.38e-82 | 253 |
| MsG0680030606.01.T01 | MTR_3g090550 | 43.314 | 344 | 188 | 5 | 12 | 354 | 6 | 343 | 4.19e-81 | 251 |
| MsG0680030606.01.T01 | MTR_5g034990 | 40.979 | 327 | 183 | 5 | 28 | 350 | 30 | 350 | 2.81e-73 | 231 |
| MsG0680030606.01.T01 | MTR_5g034930 | 41.056 | 341 | 191 | 4 | 15 | 350 | 9 | 344 | 8.41e-73 | 230 |
| MsG0680030606.01.T01 | MTR_5g034910 | 44.118 | 306 | 163 | 3 | 29 | 329 | 24 | 326 | 9.12e-73 | 230 |
| MsG0680030606.01.T01 | MTR_5g034970 | 42.947 | 319 | 163 | 4 | 15 | 329 | 10 | 313 | 8.54e-67 | 214 |
| MsG0680030606.01.T01 | MTR_5g034980 | 43.933 | 239 | 114 | 3 | 29 | 256 | 24 | 253 | 1.27e-52 | 177 |
| MsG0680030606.01.T01 | MTR_3g072560 | 36.667 | 300 | 184 | 4 | 37 | 333 | 43 | 339 | 2.00e-51 | 176 |
| MsG0680030606.01.T01 | MTR_3g095460 | 32.344 | 337 | 219 | 3 | 13 | 342 | 6 | 340 | 1.20e-49 | 170 |
| MsG0680030606.01.T01 | MTR_0096s0100 | 30.380 | 316 | 212 | 5 | 37 | 348 | 43 | 354 | 5.38e-49 | 169 |
| MsG0680030606.01.T01 | MTR_2g027030 | 35.366 | 328 | 201 | 6 | 9 | 328 | 8 | 332 | 9.01e-49 | 168 |
| MsG0680030606.01.T01 | MTR_4g094340 | 32.571 | 350 | 215 | 6 | 13 | 348 | 10 | 352 | 9.58e-49 | 168 |
| MsG0680030606.01.T01 | MTR_4g094340 | 33.634 | 333 | 200 | 6 | 30 | 348 | 45 | 370 | 1.55e-48 | 168 |
| MsG0680030606.01.T01 | MTR_2g007970 | 34.954 | 329 | 203 | 6 | 12 | 332 | 11 | 336 | 6.94e-48 | 167 |
| MsG0680030606.01.T01 | MTR_2g007990 | 33.754 | 317 | 189 | 9 | 30 | 333 | 33 | 341 | 2.20e-47 | 166 |
| MsG0680030606.01.T01 | MTR_8g041390 | 29.940 | 334 | 221 | 5 | 17 | 340 | 18 | 348 | 6.35e-47 | 164 |
| MsG0680030606.01.T01 | MTR_3g095450 | 30.435 | 345 | 220 | 4 | 25 | 361 | 20 | 352 | 9.87e-47 | 163 |
| MsG0680030606.01.T01 | MTR_3g072530 | 33.226 | 310 | 197 | 5 | 38 | 340 | 40 | 346 | 1.72e-46 | 162 |
| MsG0680030606.01.T01 | MTR_1g038560 | 30.205 | 341 | 218 | 8 | 14 | 344 | 4 | 334 | 2.91e-46 | 161 |
| MsG0680030606.01.T01 | MTR_2g007960 | 30.663 | 362 | 234 | 7 | 1 | 349 | 1 | 358 | 4.65e-46 | 162 |
| MsG0680030606.01.T01 | MTR_1g030400 | 32.659 | 346 | 207 | 7 | 32 | 354 | 27 | 369 | 8.72e-46 | 160 |
| MsG0680030606.01.T01 | MTR_1g030600 | 32.667 | 300 | 193 | 4 | 37 | 329 | 43 | 340 | 2.87e-45 | 160 |
| MsG0680030606.01.T01 | MTR_1g074120 | 33.127 | 323 | 202 | 8 | 32 | 347 | 36 | 351 | 5.33e-45 | 158 |
| MsG0680030606.01.T01 | MTR_4g094362 | 32.353 | 340 | 212 | 8 | 13 | 340 | 15 | 348 | 5.68e-45 | 159 |
| MsG0680030606.01.T01 | MTR_2g016710 | 29.938 | 324 | 221 | 4 | 30 | 349 | 26 | 347 | 7.62e-45 | 158 |
| MsG0680030606.01.T01 | MTR_1g068630 | 34.437 | 302 | 193 | 4 | 30 | 328 | 33 | 332 | 1.28e-44 | 157 |
| MsG0680030606.01.T01 | MTR_3g012420 | 33.548 | 310 | 196 | 5 | 38 | 340 | 43 | 349 | 1.44e-44 | 158 |
| MsG0680030606.01.T01 | MTR_1g074020 | 36.601 | 306 | 176 | 10 | 37 | 334 | 38 | 333 | 2.15e-44 | 156 |
| MsG0680030606.01.T01 | MTR_1g030580 | 32.381 | 315 | 203 | 4 | 37 | 347 | 41 | 349 | 7.47e-44 | 155 |
| MsG0680030606.01.T01 | MTR_1g074160 | 32.602 | 319 | 198 | 8 | 32 | 339 | 33 | 345 | 8.21e-44 | 155 |
| MsG0680030606.01.T01 | MTR_4g094360 | 31.180 | 356 | 225 | 7 | 10 | 350 | 12 | 362 | 1.95e-43 | 155 |
| MsG0680030606.01.T01 | MTR_8g092650 | 31.563 | 339 | 220 | 3 | 13 | 341 | 6 | 342 | 2.45e-43 | 154 |
| MsG0680030606.01.T01 | MTR_3g095420 | 29.091 | 330 | 224 | 3 | 13 | 333 | 8 | 336 | 2.47e-43 | 154 |
| MsG0680030606.01.T01 | MTR_7g111830 | 32.468 | 308 | 195 | 4 | 32 | 328 | 27 | 332 | 3.22e-43 | 154 |
| MsG0680030606.01.T01 | MTR_4g094340 | 33.803 | 284 | 167 | 5 | 82 | 348 | 7 | 286 | 5.07e-43 | 151 |
| MsG0680030606.01.T01 | MTR_6g036450 | 33.856 | 319 | 196 | 6 | 25 | 333 | 31 | 344 | 1.28e-42 | 152 |
| MsG0680030606.01.T01 | MTR_3g072500 | 32.692 | 312 | 198 | 6 | 37 | 339 | 45 | 353 | 1.87e-42 | 152 |
| MsG0680030606.01.T01 | MTR_1g114210 | 31.250 | 304 | 200 | 5 | 30 | 328 | 29 | 328 | 3.42e-42 | 150 |
| MsG0680030606.01.T01 | MTR_2g102340 | 32.000 | 325 | 204 | 6 | 30 | 343 | 30 | 348 | 9.64e-42 | 150 |
| MsG0680030606.01.T01 | MTR_1g070175 | 28.487 | 337 | 232 | 5 | 5 | 339 | 9 | 338 | 4.00e-41 | 148 |
| MsG0680030606.01.T01 | MTR_1g073990 | 34.783 | 299 | 185 | 6 | 37 | 329 | 41 | 335 | 4.72e-41 | 148 |
| MsG0680030606.01.T01 | MTR_1g051120 | 30.882 | 340 | 223 | 9 | 14 | 344 | 17 | 353 | 6.01e-40 | 145 |
| MsG0680030606.01.T01 | MTR_2g007260 | 33.025 | 324 | 200 | 6 | 16 | 328 | 22 | 339 | 6.91e-40 | 146 |
| MsG0680030606.01.T01 | MTR_7g100050 | 31.268 | 339 | 212 | 8 | 30 | 358 | 31 | 358 | 8.43e-40 | 145 |
| MsG0680030606.01.T01 | MTR_6g081840 | 34.532 | 278 | 173 | 4 | 71 | 340 | 67 | 343 | 1.30e-39 | 144 |
| MsG0680030606.01.T01 | MTR_1g023180 | 30.435 | 345 | 216 | 5 | 32 | 354 | 41 | 383 | 1.62e-39 | 145 |
| MsG0680030606.01.T01 | MTR_4g094360 | 32.692 | 312 | 186 | 7 | 59 | 350 | 8 | 315 | 1.92e-39 | 143 |
| MsG0680030606.01.T01 | MTR_3g072500 | 34.000 | 250 | 158 | 3 | 97 | 339 | 1 | 250 | 3.43e-39 | 141 |
| MsG0680030606.01.T01 | MTR_8g006010 | 32.733 | 333 | 210 | 4 | 32 | 361 | 30 | 351 | 7.33e-39 | 142 |
| MsG0680030606.01.T01 | MTR_1g074070 | 30.938 | 320 | 209 | 7 | 32 | 346 | 36 | 348 | 3.46e-38 | 140 |
| MsG0680030606.01.T01 | MTR_4g129650 | 31.210 | 314 | 203 | 6 | 26 | 331 | 21 | 329 | 8.37e-38 | 139 |
| MsG0680030606.01.T01 | MTR_4g094342 | 30.395 | 329 | 212 | 6 | 30 | 346 | 31 | 354 | 8.41e-38 | 139 |
| MsG0680030606.01.T01 | MTR_3g095440 | 30.915 | 317 | 209 | 4 | 25 | 333 | 20 | 334 | 2.71e-37 | 138 |
| MsG0680030606.01.T01 | MTR_2g065550 | 31.044 | 364 | 240 | 7 | 6 | 361 | 3 | 363 | 2.89e-37 | 138 |
| MsG0680030606.01.T01 | MTR_3g112480 | 28.863 | 343 | 223 | 4 | 32 | 355 | 40 | 380 | 8.66e-37 | 137 |
| MsG0680030606.01.T01 | MTR_4g094352 | 30.931 | 333 | 215 | 7 | 9 | 328 | 8 | 338 | 2.80e-36 | 135 |
| MsG0680030606.01.T01 | MTR_2g016710 | 29.749 | 279 | 192 | 3 | 30 | 306 | 26 | 302 | 7.30e-35 | 130 |
| MsG0680030606.01.T01 | MTR_3g112480 | 29.260 | 311 | 198 | 4 | 64 | 355 | 18 | 325 | 1.30e-34 | 130 |
| MsG0680030606.01.T01 | MTR_5g021160 | 30.519 | 308 | 192 | 5 | 41 | 328 | 22 | 327 | 1.05e-33 | 128 |
| MsG0680030606.01.T01 | MTR_8g006120 | 32.566 | 304 | 198 | 5 | 36 | 333 | 34 | 336 | 1.34e-33 | 128 |
| MsG0680030606.01.T01 | MTR_5g089390 | 28.920 | 287 | 193 | 5 | 46 | 328 | 48 | 327 | 3.44e-33 | 127 |
| MsG0680030606.01.T01 | MTR_4g094360 | 29.967 | 307 | 200 | 6 | 10 | 306 | 12 | 313 | 8.97e-33 | 124 |
| MsG0680030606.01.T01 | MTR_8g092650 | 30.126 | 239 | 158 | 1 | 112 | 341 | 26 | 264 | 1.29e-31 | 120 |
| MsG0680030606.01.T01 | MTR_3g072520 | 29.063 | 320 | 217 | 5 | 34 | 345 | 31 | 348 | 1.70e-31 | 122 |
| MsG0680030606.01.T01 | MTR_4g129650 | 32.589 | 224 | 141 | 3 | 110 | 328 | 1 | 219 | 5.00e-31 | 119 |
| MsG0680030606.01.T01 | MTR_3g019050 | 34.298 | 242 | 149 | 3 | 94 | 328 | 99 | 337 | 5.64e-31 | 121 |
| MsG0680030606.01.T01 | MTR_5g068790 | 28.667 | 300 | 205 | 3 | 36 | 328 | 42 | 339 | 1.00e-30 | 120 |
| MsG0680030606.01.T01 | MTR_8g006090 | 31.595 | 326 | 212 | 6 | 32 | 348 | 31 | 354 | 1.75e-30 | 119 |
| MsG0680030606.01.T01 | MTR_5g021160 | 32.068 | 237 | 156 | 2 | 97 | 328 | 8 | 244 | 3.92e-30 | 117 |
| MsG0680030606.01.T01 | MTR_1g052205 | 31.276 | 243 | 144 | 6 | 117 | 348 | 2 | 232 | 4.64e-30 | 115 |
| MsG0680030606.01.T01 | MTR_5g025340 | 28.612 | 353 | 221 | 8 | 23 | 348 | 13 | 361 | 2.11e-29 | 117 |
| MsG0680030606.01.T01 | MTR_5g069040 | 27.795 | 331 | 224 | 6 | 36 | 353 | 42 | 370 | 3.98e-29 | 116 |
| MsG0680030606.01.T01 | MTR_5g012650 | 32.131 | 305 | 187 | 9 | 56 | 348 | 52 | 348 | 1.27e-28 | 114 |
| MsG0680030606.01.T01 | MTR_5g025400 | 27.660 | 376 | 225 | 11 | 23 | 362 | 14 | 378 | 1.35e-28 | 115 |
| MsG0680030606.01.T01 | MTR_8g006090 | 32.787 | 244 | 157 | 4 | 112 | 348 | 31 | 274 | 2.37e-28 | 112 |
| MsG0680030606.01.T01 | MTR_5g025290 | 26.741 | 359 | 231 | 10 | 25 | 356 | 16 | 369 | 1.60e-27 | 112 |
| MsG0680030606.01.T01 | MTR_5g025290 | 26.446 | 363 | 227 | 10 | 25 | 356 | 44 | 397 | 2.61e-27 | 111 |
| MsG0680030606.01.T01 | MTR_5g025370 | 27.247 | 356 | 222 | 9 | 32 | 360 | 30 | 375 | 3.82e-27 | 110 |
| MsG0680030606.01.T01 | MTR_8g006050 | 30.124 | 322 | 202 | 7 | 22 | 336 | 4 | 309 | 4.09e-27 | 110 |
| MsG0680030606.01.T01 | MTR_1g014790 | 42.276 | 123 | 64 | 2 | 89 | 205 | 39 | 160 | 5.23e-27 | 106 |
| MsG0680030606.01.T01 | MTR_5g025330 | 27.557 | 352 | 230 | 9 | 32 | 363 | 29 | 375 | 7.68e-27 | 112 |
| MsG0680030606.01.T01 | MTR_3g095440 | 29.482 | 251 | 167 | 4 | 13 | 254 | 6 | 255 | 1.82e-26 | 106 |
| MsG0680030606.01.T01 | MTR_4g094340 | 31.535 | 241 | 147 | 5 | 30 | 259 | 27 | 260 | 5.26e-26 | 105 |
| MsG0680030606.01.T01 | MTR_8g072350 | 26.205 | 332 | 215 | 8 | 25 | 329 | 14 | 342 | 5.47e-26 | 107 |
| MsG0680030606.01.T01 | MTR_1g074160 | 31.739 | 230 | 144 | 7 | 32 | 254 | 33 | 256 | 9.58e-26 | 104 |
| MsG0680030606.01.T01 | MTR_4g094340 | 31.535 | 241 | 147 | 5 | 30 | 259 | 45 | 278 | 9.95e-26 | 105 |
| MsG0680030606.01.T01 | MTR_4g100840 | 28.793 | 323 | 207 | 9 | 38 | 348 | 40 | 351 | 3.21e-25 | 105 |
| MsG0680030606.01.T01 | MTR_3g112480 | 27.273 | 253 | 166 | 2 | 121 | 355 | 1 | 253 | 8.21e-24 | 99.4 |
| MsG0680030606.01.T01 | MTR_3g072500 | 29.515 | 227 | 150 | 5 | 37 | 256 | 45 | 268 | 6.10e-21 | 91.7 |
| MsG0680030606.01.T01 | MTR_2g102340 | 28.936 | 235 | 153 | 5 | 30 | 256 | 56 | 284 | 1.54e-20 | 91.7 |
| MsG0680030606.01.T01 | MTR_5g021160 | 29.911 | 224 | 135 | 5 | 41 | 244 | 22 | 243 | 1.87e-20 | 90.5 |
| MsG0680030606.01.T01 | MTR_4g094340 | 35.484 | 186 | 102 | 5 | 30 | 204 | 45 | 223 | 3.16e-20 | 88.6 |
| MsG0680030606.01.T01 | MTR_8g006090 | 28.929 | 280 | 192 | 4 | 32 | 306 | 31 | 308 | 2.36e-19 | 87.8 |
| MsG0680030606.01.T01 | MTR_3g072530 | 28.346 | 254 | 138 | 7 | 38 | 250 | 40 | 290 | 1.09e-18 | 85.9 |
| MsG0680030606.01.T01 | MTR_1g051120 | 28.713 | 202 | 135 | 6 | 14 | 209 | 17 | 215 | 1.93e-16 | 77.8 |
| MsG0680030606.01.T01 | MTR_3g072500 | 36.000 | 125 | 75 | 3 | 37 | 159 | 45 | 166 | 5.08e-15 | 73.9 |
| MsG0680030606.01.T01 | MTR_1g051120 | 28.105 | 153 | 106 | 3 | 14 | 164 | 17 | 167 | 5.45e-15 | 74.7 |
| MsG0680030606.01.T01 | MTR_1g061900 | 72.340 | 47 | 13 | 0 | 140 | 186 | 46 | 92 | 7.05e-14 | 68.9 |
| MsG0680030606.01.T01 | MTR_8g006090 | 29.719 | 249 | 161 | 6 | 32 | 275 | 31 | 270 | 2.84e-13 | 70.1 |
| MsG0680030606.01.T01 | MTR_4g094342 | 29.570 | 186 | 114 | 6 | 30 | 203 | 31 | 211 | 3.48e-13 | 69.3 |
| MsG0680030606.01.T01 | MTR_8g006090 | 30.539 | 167 | 106 | 4 | 112 | 275 | 31 | 190 | 2.40e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030606.01.T01 | AT3G28050 | 46.361 | 371 | 175 | 7 | 1 | 354 | 1 | 364 | 8.36e-107 | 318 |
| MsG0680030606.01.T01 | AT5G40240 | 44.722 | 360 | 180 | 5 | 5 | 354 | 11 | 361 | 8.06e-98 | 295 |
| MsG0680030606.01.T01 | AT5G40240 | 44.722 | 360 | 180 | 5 | 5 | 354 | 11 | 361 | 8.06e-98 | 295 |
| MsG0680030606.01.T01 | AT5G40240 | 44.722 | 360 | 180 | 5 | 5 | 354 | 25 | 375 | 2.15e-97 | 294 |
| MsG0680030606.01.T01 | AT5G40230 | 44.167 | 360 | 188 | 4 | 2 | 354 | 9 | 362 | 1.41e-96 | 292 |
| MsG0680030606.01.T01 | AT5G40210 | 41.124 | 338 | 183 | 4 | 17 | 353 | 17 | 339 | 2.20e-82 | 254 |
| MsG0680030606.01.T01 | AT4G15540 | 42.373 | 354 | 190 | 4 | 2 | 354 | 5 | 345 | 4.14e-81 | 251 |
| MsG0680030606.01.T01 | AT4G15540 | 42.373 | 354 | 190 | 4 | 2 | 354 | 5 | 345 | 4.14e-81 | 251 |
| MsG0680030606.01.T01 | AT3G28080 | 42.647 | 340 | 184 | 5 | 21 | 354 | 22 | 356 | 9.02e-73 | 230 |
| MsG0680030606.01.T01 | AT3G28100 | 42.025 | 326 | 178 | 5 | 29 | 348 | 30 | 350 | 7.02e-71 | 225 |
| MsG0680030606.01.T01 | AT3G28130 | 42.857 | 336 | 179 | 6 | 21 | 350 | 21 | 349 | 1.05e-70 | 225 |
| MsG0680030606.01.T01 | AT3G28070 | 41.265 | 332 | 183 | 5 | 29 | 354 | 33 | 358 | 6.11e-67 | 216 |
| MsG0680030606.01.T01 | AT3G28080 | 41.369 | 336 | 178 | 5 | 25 | 354 | 26 | 348 | 2.12e-66 | 214 |
| MsG0680030606.01.T01 | AT3G28080 | 42.910 | 268 | 143 | 4 | 93 | 354 | 4 | 267 | 3.94e-61 | 197 |
| MsG0680030606.01.T01 | AT3G28080 | 42.910 | 268 | 143 | 4 | 93 | 354 | 4 | 267 | 3.94e-61 | 197 |
| MsG0680030606.01.T01 | AT3G28080 | 42.910 | 268 | 143 | 4 | 93 | 354 | 4 | 267 | 3.94e-61 | 197 |
| MsG0680030606.01.T01 | AT3G28080 | 42.910 | 268 | 143 | 4 | 93 | 354 | 4 | 267 | 3.94e-61 | 197 |
| MsG0680030606.01.T01 | AT3G28070 | 41.045 | 268 | 147 | 4 | 93 | 354 | 4 | 266 | 1.70e-60 | 196 |
| MsG0680030606.01.T01 | AT3G28130 | 44.215 | 242 | 128 | 3 | 93 | 328 | 6 | 246 | 1.07e-57 | 189 |
| MsG0680030606.01.T01 | AT3G28130 | 44.215 | 242 | 128 | 3 | 93 | 328 | 6 | 246 | 1.07e-57 | 189 |
| MsG0680030606.01.T01 | AT4G08300 | 34.262 | 359 | 209 | 11 | 9 | 349 | 6 | 355 | 3.04e-53 | 180 |
| MsG0680030606.01.T01 | AT3G28070 | 41.549 | 284 | 158 | 4 | 29 | 306 | 33 | 314 | 3.77e-53 | 178 |
| MsG0680030606.01.T01 | AT1G21890 | 33.134 | 335 | 183 | 6 | 37 | 347 | 35 | 352 | 1.37e-52 | 179 |
| MsG0680030606.01.T01 | AT1G70260 | 32.362 | 343 | 220 | 4 | 10 | 341 | 9 | 350 | 7.27e-50 | 171 |
| MsG0680030606.01.T01 | AT1G44800 | 34.000 | 300 | 190 | 4 | 37 | 331 | 35 | 331 | 2.66e-49 | 170 |
| MsG0680030606.01.T01 | AT3G30340 | 32.622 | 328 | 206 | 5 | 30 | 346 | 28 | 351 | 8.72e-49 | 168 |
| MsG0680030606.01.T01 | AT2G39510 | 35.072 | 345 | 199 | 7 | 32 | 363 | 27 | 359 | 1.83e-47 | 165 |
| MsG0680030606.01.T01 | AT3G28100 | 43.348 | 233 | 125 | 3 | 29 | 255 | 30 | 261 | 1.12e-46 | 160 |
| MsG0680030606.01.T01 | AT3G28080 | 39.316 | 234 | 132 | 4 | 127 | 354 | 1 | 230 | 9.47e-46 | 156 |
| MsG0680030606.01.T01 | AT5G07050 | 33.553 | 304 | 188 | 4 | 38 | 329 | 43 | 344 | 3.01e-45 | 160 |
| MsG0680030606.01.T01 | AT3G28130 | 42.083 | 240 | 132 | 3 | 21 | 254 | 21 | 259 | 9.73e-45 | 155 |
| MsG0680030606.01.T01 | AT3G28070 | 37.179 | 234 | 136 | 4 | 127 | 354 | 1 | 229 | 2.63e-44 | 153 |
| MsG0680030606.01.T01 | AT1G60050 | 30.328 | 366 | 233 | 8 | 1 | 348 | 4 | 365 | 3.26e-44 | 157 |
| MsG0680030606.01.T01 | AT2G40900 | 31.290 | 310 | 196 | 4 | 37 | 339 | 35 | 334 | 7.92e-44 | 156 |
| MsG0680030606.01.T01 | AT4G08290 | 31.124 | 347 | 228 | 6 | 9 | 347 | 8 | 351 | 3.91e-43 | 154 |
| MsG0680030606.01.T01 | AT3G28130 | 41.346 | 208 | 115 | 3 | 127 | 328 | 1 | 207 | 7.09e-43 | 149 |
| MsG0680030606.01.T01 | AT2G37460 | 32.399 | 321 | 204 | 6 | 30 | 343 | 32 | 346 | 9.38e-43 | 153 |
| MsG0680030606.01.T01 | AT1G21890 | 32.881 | 295 | 161 | 5 | 37 | 307 | 35 | 316 | 2.76e-42 | 151 |
| MsG0680030606.01.T01 | AT4G28040 | 32.628 | 331 | 209 | 6 | 16 | 344 | 13 | 331 | 2.77e-42 | 151 |
| MsG0680030606.01.T01 | AT4G28040 | 32.628 | 331 | 209 | 6 | 16 | 344 | 13 | 331 | 2.77e-42 | 151 |
| MsG0680030606.01.T01 | AT4G28040 | 32.628 | 331 | 209 | 6 | 16 | 344 | 13 | 331 | 2.77e-42 | 151 |
| MsG0680030606.01.T01 | AT4G28040 | 32.628 | 331 | 209 | 6 | 16 | 344 | 13 | 331 | 2.77e-42 | 151 |
| MsG0680030606.01.T01 | AT4G28040 | 32.628 | 331 | 209 | 6 | 16 | 344 | 13 | 331 | 2.77e-42 | 151 |
| MsG0680030606.01.T01 | AT5G13670 | 29.970 | 337 | 220 | 7 | 13 | 341 | 8 | 336 | 2.45e-41 | 149 |
| MsG0680030606.01.T01 | AT3G28080 | 38.577 | 267 | 102 | 4 | 93 | 354 | 4 | 213 | 5.55e-41 | 144 |
| MsG0680030606.01.T01 | AT3G56620 | 31.724 | 290 | 194 | 3 | 37 | 325 | 35 | 321 | 7.46e-41 | 148 |
| MsG0680030606.01.T01 | AT4G01430 | 28.274 | 336 | 228 | 7 | 14 | 339 | 9 | 341 | 9.48e-41 | 147 |
| MsG0680030606.01.T01 | AT1G09380 | 32.343 | 303 | 193 | 6 | 32 | 325 | 27 | 326 | 2.07e-40 | 146 |
| MsG0680030606.01.T01 | AT5G64700 | 32.288 | 319 | 201 | 4 | 32 | 338 | 27 | 342 | 1.21e-39 | 144 |
| MsG0680030606.01.T01 | AT3G18200 | 31.650 | 297 | 198 | 3 | 61 | 355 | 84 | 377 | 3.49e-39 | 143 |
| MsG0680030606.01.T01 | AT3G28100 | 48.913 | 184 | 88 | 2 | 29 | 207 | 30 | 212 | 1.20e-38 | 139 |
| MsG0680030606.01.T01 | AT1G75500 | 31.068 | 309 | 200 | 4 | 32 | 329 | 39 | 345 | 1.29e-38 | 142 |
| MsG0680030606.01.T01 | AT1G75500 | 31.068 | 309 | 200 | 4 | 32 | 329 | 39 | 345 | 1.29e-38 | 142 |
| MsG0680030606.01.T01 | AT1G11450 | 29.217 | 332 | 227 | 6 | 13 | 339 | 15 | 343 | 2.55e-38 | 140 |
| MsG0680030606.01.T01 | AT1G01070 | 29.846 | 325 | 213 | 7 | 14 | 328 | 16 | 335 | 9.29e-37 | 136 |
| MsG0680030606.01.T01 | AT3G28130 | 46.073 | 191 | 97 | 2 | 21 | 206 | 21 | 210 | 1.27e-36 | 132 |
| MsG0680030606.01.T01 | AT1G43650 | 32.258 | 310 | 205 | 4 | 32 | 339 | 26 | 332 | 2.60e-36 | 135 |
| MsG0680030606.01.T01 | AT1G11450 | 29.866 | 298 | 202 | 5 | 46 | 339 | 5 | 299 | 5.53e-36 | 133 |
| MsG0680030606.01.T01 | AT4G01440 | 28.571 | 308 | 208 | 7 | 36 | 334 | 32 | 336 | 1.49e-35 | 133 |
| MsG0680030606.01.T01 | AT1G11460 | 28.261 | 322 | 223 | 5 | 13 | 328 | 15 | 334 | 2.14e-35 | 132 |
| MsG0680030606.01.T01 | AT3G53210 | 30.640 | 297 | 199 | 4 | 38 | 329 | 35 | 329 | 2.16e-35 | 133 |
| MsG0680030606.01.T01 | AT1G68170 | 32.899 | 307 | 195 | 6 | 30 | 328 | 30 | 333 | 2.96e-35 | 132 |
| MsG0680030606.01.T01 | AT1G68170 | 32.899 | 307 | 195 | 6 | 30 | 328 | 20 | 323 | 4.09e-35 | 132 |
| MsG0680030606.01.T01 | AT1G25270 | 30.178 | 338 | 220 | 6 | 17 | 344 | 7 | 338 | 4.31e-35 | 132 |
| MsG0680030606.01.T01 | AT1G01070 | 30.797 | 276 | 178 | 5 | 61 | 328 | 18 | 288 | 8.29e-35 | 130 |
| MsG0680030606.01.T01 | AT3G28080 | 47.872 | 188 | 92 | 2 | 21 | 203 | 22 | 208 | 9.87e-35 | 130 |
| MsG0680030606.01.T01 | AT3G28080 | 43.820 | 89 | 47 | 1 | 266 | 354 | 217 | 302 | 4.31e-16 | 78.6 |
| MsG0680030606.01.T01 | AT1G11450 | 29.592 | 294 | 200 | 5 | 50 | 339 | 2 | 292 | 1.02e-34 | 129 |
| MsG0680030606.01.T01 | AT4G30420 | 31.138 | 334 | 212 | 7 | 18 | 341 | 8 | 333 | 4.16e-34 | 129 |
| MsG0680030606.01.T01 | AT4G30420 | 31.138 | 334 | 212 | 7 | 18 | 341 | 18 | 343 | 4.71e-34 | 130 |
| MsG0680030606.01.T01 | AT5G45370 | 28.354 | 328 | 220 | 6 | 32 | 355 | 39 | 355 | 1.01e-32 | 125 |
| MsG0680030606.01.T01 | AT4G01430 | 28.322 | 286 | 193 | 6 | 30 | 306 | 26 | 308 | 8.84e-32 | 122 |
| MsG0680030606.01.T01 | AT1G11450 | 30.677 | 251 | 170 | 3 | 92 | 339 | 2 | 251 | 1.57e-31 | 120 |
| MsG0680030606.01.T01 | AT3G53210 | 31.489 | 235 | 157 | 2 | 99 | 329 | 38 | 272 | 2.38e-31 | 120 |
| MsG0680030606.01.T01 | AT3G18200 | 32.000 | 250 | 163 | 3 | 110 | 355 | 1 | 247 | 4.77e-31 | 118 |
| MsG0680030606.01.T01 | AT5G45370 | 26.301 | 346 | 228 | 6 | 32 | 355 | 39 | 379 | 8.34e-30 | 118 |
| MsG0680030606.01.T01 | AT5G45370 | 26.301 | 346 | 228 | 6 | 32 | 355 | 39 | 379 | 8.34e-30 | 118 |
| MsG0680030606.01.T01 | AT2G37450 | 33.333 | 249 | 147 | 5 | 102 | 336 | 4 | 247 | 1.55e-29 | 115 |
| MsG0680030606.01.T01 | AT4G01440 | 27.500 | 280 | 194 | 6 | 36 | 309 | 32 | 308 | 2.26e-29 | 115 |
| MsG0680030606.01.T01 | AT2G37450 | 33.077 | 260 | 155 | 5 | 91 | 336 | 65 | 319 | 2.54e-29 | 116 |
| MsG0680030606.01.T01 | AT3G30340 | 31.897 | 232 | 151 | 3 | 30 | 256 | 28 | 257 | 2.80e-29 | 114 |
| MsG0680030606.01.T01 | AT5G47470 | 31.633 | 294 | 186 | 7 | 61 | 348 | 79 | 363 | 1.01e-28 | 115 |
| MsG0680030606.01.T01 | AT5G47470 | 31.633 | 294 | 186 | 7 | 61 | 348 | 107 | 391 | 1.04e-28 | 115 |
| MsG0680030606.01.T01 | AT1G11450 | 27.090 | 299 | 211 | 5 | 13 | 306 | 15 | 311 | 6.20e-28 | 112 |
| MsG0680030606.01.T01 | AT4G01440 | 27.632 | 228 | 159 | 3 | 113 | 334 | 1 | 228 | 1.71e-27 | 109 |
| MsG0680030606.01.T01 | AT4G01440 | 27.632 | 228 | 159 | 3 | 113 | 334 | 1 | 228 | 1.71e-27 | 109 |
| MsG0680030606.01.T01 | AT5G47470 | 31.655 | 278 | 176 | 6 | 61 | 332 | 107 | 376 | 2.70e-27 | 111 |
| MsG0680030606.01.T01 | AT4G08290 | 32.143 | 252 | 160 | 6 | 9 | 252 | 8 | 256 | 1.54e-26 | 107 |
| MsG0680030606.01.T01 | AT4G01430 | 28.431 | 204 | 140 | 2 | 142 | 339 | 1 | 204 | 3.82e-24 | 99.4 |
| MsG0680030606.01.T01 | AT5G64700 | 32.340 | 235 | 144 | 4 | 32 | 254 | 27 | 258 | 5.12e-23 | 97.4 |
| MsG0680030606.01.T01 | AT4G19185 | 25.904 | 332 | 216 | 6 | 25 | 329 | 25 | 353 | 7.42e-23 | 99.0 |
| MsG0680030606.01.T01 | AT4G01440 | 29.778 | 225 | 149 | 6 | 36 | 254 | 32 | 253 | 1.01e-22 | 96.7 |
| MsG0680030606.01.T01 | AT5G45370 | 25.000 | 280 | 186 | 4 | 97 | 355 | 1 | 277 | 1.47e-22 | 96.3 |
| MsG0680030606.01.T01 | AT5G45370 | 25.000 | 280 | 186 | 4 | 97 | 355 | 1 | 277 | 1.47e-22 | 96.3 |
| MsG0680030606.01.T01 | AT3G45870 | 25.974 | 308 | 208 | 5 | 32 | 323 | 31 | 334 | 1.53e-22 | 98.2 |
| MsG0680030606.01.T01 | AT4G01450 | 27.410 | 332 | 229 | 6 | 13 | 339 | 10 | 334 | 5.53e-22 | 96.3 |
| MsG0680030606.01.T01 | AT3G28060 | 37.398 | 123 | 75 | 2 | 185 | 306 | 33 | 154 | 1.95e-21 | 90.1 |
| MsG0680030606.01.T01 | AT4G19185 | 25.194 | 258 | 174 | 3 | 90 | 329 | 19 | 275 | 1.97e-21 | 94.0 |
| MsG0680030606.01.T01 | AT2G37450 | 31.556 | 225 | 135 | 5 | 126 | 336 | 61 | 280 | 2.44e-21 | 93.2 |
| MsG0680030606.01.T01 | AT3G53210 | 32.432 | 185 | 118 | 4 | 38 | 217 | 35 | 217 | 4.75e-21 | 91.7 |
| MsG0680030606.01.T01 | AT4G01450 | 27.138 | 269 | 184 | 6 | 13 | 276 | 10 | 271 | 9.54e-21 | 92.4 |
| MsG0680030606.01.T01 | AT4G24980 | 28.216 | 241 | 127 | 6 | 91 | 329 | 43 | 239 | 1.58e-20 | 90.5 |
| MsG0680030606.01.T01 | AT1G43650 | 32.589 | 224 | 146 | 4 | 32 | 253 | 26 | 246 | 2.44e-19 | 87.0 |
| MsG0680030606.01.T01 | AT4G01450 | 27.935 | 247 | 166 | 6 | 13 | 254 | 10 | 249 | 2.26e-18 | 84.3 |
| MsG0680030606.01.T01 | AT4G16620 | 28.685 | 251 | 148 | 6 | 99 | 332 | 1 | 237 | 1.45e-17 | 82.0 |
| MsG0680030606.01.T01 | AT4G16620 | 28.685 | 251 | 148 | 6 | 99 | 332 | 1 | 237 | 1.45e-17 | 82.0 |
| MsG0680030606.01.T01 | AT3G45870 | 24.399 | 291 | 200 | 5 | 32 | 306 | 31 | 317 | 5.96e-17 | 81.3 |
| MsG0680030606.01.T01 | AT4G16620 | 28.685 | 251 | 148 | 6 | 99 | 332 | 98 | 334 | 7.17e-17 | 81.3 |
| MsG0680030606.01.T01 | AT4G01450 | 29.767 | 215 | 139 | 6 | 13 | 222 | 10 | 217 | 8.76e-16 | 76.6 |
| MsG0680030606.01.T01 | AT5G45370 | 24.603 | 252 | 160 | 6 | 128 | 355 | 74 | 319 | 9.53e-15 | 74.7 |
| MsG0680030606.01.T01 | AT3G45870 | 24.180 | 244 | 165 | 4 | 95 | 323 | 21 | 259 | 1.67e-13 | 70.9 |
| MsG0680030606.01.T01 | AT3G28070 | 51.020 | 98 | 47 | 1 | 29 | 126 | 33 | 129 | 1.15e-11 | 64.3 |
| MsG0680030606.01.T01 | AT3G45870 | 24.454 | 229 | 154 | 4 | 32 | 244 | 31 | 256 | 3.34e-11 | 63.9 |
Find 74 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCCTGGGCAATACACTTAA+AGG | 0.175056 | 6:+6007691 | MsG0680030606.01.T01:CDS |
| TCATGCTAGCTGTTACTTTC+AGG | 0.201149 | 6:+6005815 | MsG0680030606.01.T01:CDS |
| AGTAGTAATGCTAAGGTAAT+TGG | 0.223192 | 6:+6006407 | MsG0680030606.01.T01:CDS |
| AATTCAAGTGCTTGGAAAAT+AGG | 0.233495 | 6:+6007171 | MsG0680030606.01.T01:CDS |
| CAGATGTGCATCTCAGATTC+TGG | 0.249223 | 6:+6005720 | MsG0680030606.01.T01:intron |
| TTGGTCTTTATGCTGTATTA+TGG | 0.276154 | 6:+6008123 | MsG0680030606.01.T01:CDS |
| TATGCAAAAGTGTGCTTCTT+GGG | 0.297599 | 6:+6004988 | MsG0680030606.01.T01:CDS |
| AAGACCAATTGAGATTATTA+TGG | 0.308192 | 6:-6008108 | None:intergenic |
| TGCTTCAGCAATTGCCAATC+TGG | 0.326863 | 6:+6005777 | MsG0680030606.01.T01:CDS |
| TGGTCTTTATGCTGTATTAT+GGG | 0.328682 | 6:+6008124 | MsG0680030606.01.T01:CDS |
| TGGCAAAACATCCATGTAAA+AGG | 0.335783 | 6:-6004515 | None:intergenic |
| AGTGTGCTTCTTGGGGCAAT+AGG | 0.339967 | 6:+6004996 | MsG0680030606.01.T01:CDS |
| ATATGCAAAAGTGTGCTTCT+TGG | 0.358268 | 6:+6004987 | MsG0680030606.01.T01:CDS |
| CAGTTCCAAATTCAAGTGCT+TGG | 0.364190 | 6:+6007163 | MsG0680030606.01.T01:CDS |
| CATATAATGGATAAAGTGAT+TGG | 0.365930 | 6:-6004969 | None:intergenic |
| TGCAAATTGTTATCTCCGTT+TGG | 0.366008 | 6:+6007744 | MsG0680030606.01.T01:CDS |
| AGGACTAAAGTTAGTTCATC+AGG | 0.368404 | 6:-6007090 | None:intergenic |
| GATTCAAGCTGGGCCATTGC+TGG | 0.372562 | 6:+6006536 | MsG0680030606.01.T01:CDS |
| GCTCTATAGCTTTGCAAAAG+AGG | 0.379932 | 6:-6008212 | None:intergenic |
| TTCAAAGCAGCCACACTTCA+AGG | 0.384126 | 6:+6004589 | MsG0680030606.01.T01:CDS |
| TCAAGTCTGTGGATTCAAGC+TGG | 0.406376 | 6:+6006525 | MsG0680030606.01.T01:CDS |
| GTATCTTACAGAAGAAATAA+TGG | 0.408518 | 6:-6007214 | None:intergenic |
| CTCGGTGATACTCTTCATCT+TGG | 0.414439 | 6:+6007782 | MsG0680030606.01.T01:CDS |
| TGGCAGTTATGGAATATATC+AGG | 0.422216 | 6:-6007110 | None:intergenic |
| ATTGCTTATGCTTATGCTGT+TGG | 0.423773 | 6:+6004631 | MsG0680030606.01.T01:CDS |
| ATTGTTATCTCCGTTTGGTT+GGG | 0.429576 | 6:+6007749 | MsG0680030606.01.T01:CDS |
| AATTGTTATCTCCGTTTGGT+TGG | 0.430607 | 6:+6007748 | MsG0680030606.01.T01:CDS |
| GTGTGCTTCTTGGGGCAATA+GGG | 0.444672 | 6:+6004997 | MsG0680030606.01.T01:CDS |
| GCCTGGGCAATACACTTAAA+GGG | 0.449896 | 6:+6007692 | MsG0680030606.01.T01:CDS |
| AGAGGAAGATGTTGGTAGCT+TGG | 0.463078 | 6:+6008166 | MsG0680030606.01.T01:CDS |
| GGAGCCATAATAATCTCAAT+TGG | 0.466604 | 6:+6008104 | MsG0680030606.01.T01:CDS |
| CAAAGCAACAGAAGAGATAG+AGG | 0.466891 | 6:+6008148 | MsG0680030606.01.T01:CDS |
| GAATATAACGCCCAACCAAA+CGG | 0.472042 | 6:-6007759 | None:intergenic |
| AGATGTGCATCTCAGATTCT+GGG | 0.472571 | 6:+6005721 | MsG0680030606.01.T01:intron |
| TGAAGCAAGTGTTGGAGAAC+TGG | 0.474644 | 6:-6005761 | None:intergenic |
| AGATATGATTGTGGCAGTTA+TGG | 0.474728 | 6:-6007121 | None:intergenic |
| AGAGGTGCATTCTCAGTAGA+TGG | 0.478733 | 6:-6008194 | None:intergenic |
| TAGGCAATATAGTTTCTGCC+TGG | 0.481099 | 6:+6007675 | MsG0680030606.01.T01:CDS |
| CCCCTTTAAGTGTATTGCCC+AGG | 0.499563 | 6:-6007693 | None:intergenic |
| GAAGAGATAGAGGAAGATGT+TGG | 0.505673 | 6:+6008158 | MsG0680030606.01.T01:CDS |
| ACAGACTTGAGAAAGTCAAT+TGG | 0.519975 | 6:-6006512 | None:intergenic |
| TGGTTGGGCGTTATATTCCT+CGG | 0.528524 | 6:+6007764 | MsG0680030606.01.T01:CDS |
| CAAGTCTGTGGATTCAAGCT+GGG | 0.528710 | 6:+6006526 | MsG0680030606.01.T01:CDS |
| GAGTAGAAGTAGTAATGCTA+AGG | 0.539451 | 6:+6006400 | MsG0680030606.01.T01:CDS |
| AATTTGCAATGGCTTGAATG+AGG | 0.542043 | 6:-6007729 | None:intergenic |
| AATTGACTTTCTCAAGTCTG+TGG | 0.542290 | 6:+6006514 | MsG0680030606.01.T01:CDS |
| CTTCTGGTGAAAAGAGTGAC+AGG | 0.545087 | 6:-6004670 | None:intergenic |
| ATGGATAAAGTGATTGGAGG+AGG | 0.547691 | 6:-6004963 | None:intergenic |
| AGTGAAAGCAGGTACCAGAT+TGG | 0.548690 | 6:-6005791 | None:intergenic |
| AGGCAATATAGTTTCTGCCT+GGG | 0.551084 | 6:+6007676 | MsG0680030606.01.T01:CDS |
| GCAATTGCTGAAGCAAGTGT+TGG | 0.552785 | 6:-6005769 | None:intergenic |
| GGAAGCATAATATCAATAGC+AGG | 0.554009 | 6:+6006428 | MsG0680030606.01.T01:CDS |
| GGTCTTTATGCTGTATTATG+GGG | 0.556844 | 6:+6008125 | MsG0680030606.01.T01:CDS |
| GTGATACTCTTCATCTTGGA+AGG | 0.558004 | 6:+6007786 | MsG0680030606.01.T01:CDS |
| ATAATGGATAAAGTGATTGG+AGG | 0.571736 | 6:-6004966 | None:intergenic |
| TCATAGCATATAATCACAGC+AGG | 0.577064 | 6:-6004538 | None:intergenic |
| ATGCAAAAGTGTGCTTCTTG+GGG | 0.582659 | 6:+6004989 | MsG0680030606.01.T01:CDS |
| ATTGGTTGATGAAGTGATGA+GGG | 0.584559 | 6:-6006494 | None:intergenic |
| AAGTGATGAGGGATTCATGA+TGG | 0.585068 | 6:-6006483 | None:intergenic |
| ATTGTTCATTCCTTGAAGTG+TGG | 0.597270 | 6:-6004599 | None:intergenic |
| TGTCAGCAGAATGCCAGCAA+TGG | 0.597793 | 6:-6006549 | None:intergenic |
| TCAGAAACATGACAAGAAGA+TGG | 0.604265 | 6:+6004491 | MsG0680030606.01.T01:exon |
| TACAACTGTAGATATGATTG+TGG | 0.610384 | 6:-6007130 | None:intergenic |
| CCTGGGCAATACACTTAAAG+GGG | 0.611872 | 6:+6007693 | MsG0680030606.01.T01:CDS |
| GCTAGCATGAAAGTGAAAGC+AGG | 0.619412 | 6:-6005802 | None:intergenic |
| TTTGTGTTGACTTTCTACAA+AGG | 0.624165 | 6:+6006455 | MsG0680030606.01.T01:CDS |
| ACGGAGATAACAATTTGCAA+TGG | 0.629852 | 6:-6007740 | None:intergenic |
| GGACTAAAGTTAGTTCATCA+GGG | 0.635900 | 6:-6007089 | None:intergenic |
| GATGTGCATCTCAGATTCTG+GGG | 0.640710 | 6:+6005722 | MsG0680030606.01.T01:intron |
| TAGCATATAATCACAGCAGG+TGG | 0.648190 | 6:-6004535 | None:intergenic |
| AATTGGTTGATGAAGTGATG+AGG | 0.661461 | 6:-6006495 | None:intergenic |
| ATGCTATGAATGTATTGACA+TGG | 0.692356 | 6:+6004552 | MsG0680030606.01.T01:CDS |
| CTGGGCAATACACTTAAAGG+GGG | 0.717095 | 6:+6007694 | MsG0680030606.01.T01:CDS |
| CAAGATGAAGAGTATCACCG+AGG | 0.790458 | 6:-6007781 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAATATCATATATATAT+TGG | - | Chr6:6007492-6007511 | None:intergenic | 10.0% |
| !! | GAAACAAAAATATACATAAA+TGG | - | Chr6:6008065-6008084 | None:intergenic | 15.0% |
| !!! | TATAAATTTTGCCAAAATTT+CGG | - | Chr6:6004801-6004820 | None:intergenic | 15.0% |
| !!! | TTCAATTTGATTTAACAATT+CGG | - | Chr6:6007902-6007921 | None:intergenic | 15.0% |
| !!! | TTTTGGCAAAATTTATATAT+TGG | + | Chr6:6004804-6004823 | MsG0680030606.01.T01:intron | 15.0% |
| !! | AAATATACACTTAGAAATTG+GGG | + | Chr6:6007529-6007548 | MsG0680030606.01.T01:intron | 20.0% |
| !! | CAAATATACACTTAGAAATT+GGG | + | Chr6:6007528-6007547 | MsG0680030606.01.T01:intron | 20.0% |
| !! | CAAGTTACTATAATACTAAA+AGG | - | Chr6:6005593-6005612 | None:intergenic | 20.0% |
| !! | GTAAAATAACTTAGTTTCAA+AGG | - | Chr6:6005878-6005897 | None:intergenic | 20.0% |
| !! | TCAAATATACACTTAGAAAT+TGG | + | Chr6:6007527-6007546 | MsG0680030606.01.T01:intron | 20.0% |
| !! | TTGGAATTACAATAGAATTA+CGG | + | Chr6:6004823-6004842 | MsG0680030606.01.T01:intron | 20.0% |
| !!! | ACTTTTGAAAAGAAAATAGA+TGG | + | Chr6:6008239-6008258 | MsG0680030606.01.T01:CDS | 20.0% |
| !!! | AGAAAAAGTACAGTTTTTTA+GGG | - | Chr6:6005353-6005372 | None:intergenic | 20.0% |
| !!! | AGTAATAGTTTTGTCAATTA+CGG | + | Chr6:6006022-6006041 | MsG0680030606.01.T01:intron | 20.0% |
| !!! | AGTTATTTTTTTCATTTCAC+AGG | + | Chr6:6007047-6007066 | MsG0680030606.01.T01:intron | 20.0% |
| !!! | ATGATTTATGTTTCATGTTT+TGG | + | Chr6:6005677-6005696 | MsG0680030606.01.T01:intron | 20.0% |
| !!! | CATTTTCTCAAAAATGTTAT+CGG | + | Chr6:6005500-6005519 | MsG0680030606.01.T01:intron | 20.0% |
| !!! | CTTTTAGTATTATAGTAACT+TGG | + | Chr6:6005591-6005610 | MsG0680030606.01.T01:intron | 20.0% |
| !!! | TTGTTTCTTAACTTGATTTT+AGG | - | Chr6:6006661-6006680 | None:intergenic | 20.0% |
| !!! | TTTAATTTTCCTTTGATCTA+TGG | - | Chr6:6006258-6006277 | None:intergenic | 20.0% |
| ! | AAGACCAATTGAGATTATTA+TGG | - | Chr6:6008111-6008130 | None:intergenic | 25.0% |
| ! | ATAACAGGAAAACAAATAAG+TGG | - | Chr6:6006346-6006365 | None:intergenic | 25.0% |
| ! | ATCATATATATATTGGACCA+CGG | - | Chr6:6007485-6007504 | None:intergenic | 25.0% |
| ! | GTATCTTACAGAAGAAATAA+TGG | - | Chr6:6007217-6007236 | None:intergenic | 25.0% |
| ! | GTTAATGAAGTTCAAAATTG+TGG | - | Chr6:6007417-6007436 | None:intergenic | 25.0% |
| ! | GTTAGTTAGTTATAGTTACA+GGG | + | Chr6:6005631-6005650 | MsG0680030606.01.T01:intron | 25.0% |
| ! | TGTTAGTTAGTTATAGTTAC+AGG | + | Chr6:6005630-6005649 | MsG0680030606.01.T01:intron | 25.0% |
| ! | TTAAACAGTCCTATTAGATT+TGG | - | Chr6:6007862-6007881 | None:intergenic | 25.0% |
| ! | TTAAATTAAGCTGAATGAGA+AGG | + | Chr6:6006273-6006292 | MsG0680030606.01.T01:intron | 25.0% |
| ! | TTAGTTAGTTATAGTTACAG+GGG | + | Chr6:6005632-6005651 | MsG0680030606.01.T01:intron | 25.0% |
| ! | TTCTATCATACACCATATTT+CGG | - | Chr6:6005099-6005118 | None:intergenic | 25.0% |
| !! | TTTGATTTAACAATTCGGTT+TGG | - | Chr6:6007897-6007916 | None:intergenic | 25.0% |
| !! | TTTTTGCATTTGATTCTTTG+TGG | + | Chr6:6007823-6007842 | MsG0680030606.01.T01:intron | 25.0% |
| !!! | CAGAAAAAGTACAGTTTTTT+AGG | - | Chr6:6005354-6005373 | None:intergenic | 25.0% |
| !!! | CATATAATGGATAAAGTGAT+TGG | - | Chr6:6004972-6004991 | None:intergenic | 25.0% |
| !!! | GTTTTTTCTAATCCTTGAAT+AGG | + | Chr6:6005238-6005257 | MsG0680030606.01.T01:intron | 25.0% |
| !!! | TTTCATGTTTTGGAATTGTT+TGG | + | Chr6:6005687-6005706 | MsG0680030606.01.T01:intron | 25.0% |
| AATTCAAGTGCTTGGAAAAT+AGG | + | Chr6:6007171-6007190 | MsG0680030606.01.T01:CDS | 30.0% | |
| AGTAGTAATGCTAAGGTAAT+TGG | + | Chr6:6006407-6006426 | MsG0680030606.01.T01:CDS | 30.0% | |
| ATAAAGAATTGTGAACCTTC+TGG | - | Chr6:6004689-6004708 | None:intergenic | 30.0% | |
| ATTAGAAAAAACCTATGTCC+TGG | - | Chr6:6005230-6005249 | None:intergenic | 30.0% | |
| CTTGTTAGTATGTGAAAAGT+GGG | + | Chr6:6005946-6005965 | MsG0680030606.01.T01:intron | 30.0% | |
| GTCAAATATCAGCTATATAG+AGG | - | Chr6:6006190-6006209 | None:intergenic | 30.0% | |
| GTTATCATTGCAATTAAGGA+TGG | + | Chr6:6006361-6006380 | MsG0680030606.01.T01:intron | 30.0% | |
| TAACAGCAGGAACAAAAAAA+AGG | - | Chr6:6005071-6005090 | None:intergenic | 30.0% | |
| TACAACTGTAGATATGATTG+TGG | - | Chr6:6007133-6007152 | None:intergenic | 30.0% | |
| TCCTGTTATCATTGCAATTA+AGG | + | Chr6:6006357-6006376 | MsG0680030606.01.T01:intron | 30.0% | |
| TCCTTAATTGCAATGATAAC+AGG | - | Chr6:6006361-6006380 | None:intergenic | 30.0% | |
| TGGTCTTTATGCTGTATTAT+GGG | + | Chr6:6008124-6008143 | MsG0680030606.01.T01:CDS | 30.0% | |
| ! | AAATTTTGCCAAAATTTCGG+TGG | - | Chr6:6004798-6004817 | None:intergenic | 30.0% |
| ! | AAGCACACTTTTGCATATAA+TGG | - | Chr6:6004985-6005004 | None:intergenic | 30.0% |
| ! | ACAAAACCATCCTGAAATTT+TGG | - | Chr6:6005394-6005413 | None:intergenic | 30.0% |
| ! | ACTTGTTAGTATGTGAAAAG+TGG | + | Chr6:6005945-6005964 | MsG0680030606.01.T01:intron | 30.0% |
| ! | ATGCTATGAATGTATTGACA+TGG | + | Chr6:6004552-6004571 | MsG0680030606.01.T01:CDS | 30.0% |
| ! | ATTTTCCAAGCACTTGAATT+TGG | - | Chr6:6007171-6007190 | None:intergenic | 30.0% |
| ! | TCTATGGACTAACATCATTA+TGG | - | Chr6:6006242-6006261 | None:intergenic | 30.0% |
| ! | TCTGCATTTTGCAGTATAAT+TGG | + | Chr6:6008083-6008102 | MsG0680030606.01.T01:intron | 30.0% |
| ! | TGTGATTTTAAGCATACACT+TGG | + | Chr6:6004872-6004891 | MsG0680030606.01.T01:intron | 30.0% |
| ! | TTGGTCTTTATGCTGTATTA+TGG | + | Chr6:6008123-6008142 | MsG0680030606.01.T01:CDS | 30.0% |
| ! | TTTCTTTTCCAGGGAATTTT+CGG | + | Chr6:6007644-6007663 | MsG0680030606.01.T01:intron | 30.0% |
| !! | ATAATGGATAAAGTGATTGG+AGG | - | Chr6:6004969-6004988 | None:intergenic | 30.0% |
| !! | TTTGTGTTGACTTTCTACAA+AGG | + | Chr6:6006455-6006474 | MsG0680030606.01.T01:CDS | 30.0% |
| !!! | TAACAATTCGGTTTGGTTTT+TGG | - | Chr6:6007890-6007909 | None:intergenic | 30.0% |
| AACTCTCCAAAATTTCAGGA+TGG | + | Chr6:6005385-6005404 | MsG0680030606.01.T01:intron | 35.0% | |
| AATTGTTATCTCCGTTTGGT+TGG | + | Chr6:6007748-6007767 | MsG0680030606.01.T01:CDS | 35.0% | |
| AATTTGCAATGGCTTGAATG+AGG | - | Chr6:6007732-6007751 | None:intergenic | 35.0% | |
| ACAGACTTGAGAAAGTCAAT+TGG | - | Chr6:6006515-6006534 | None:intergenic | 35.0% | |
| ACCAAACTCTCCAAAATTTC+AGG | + | Chr6:6005381-6005400 | MsG0680030606.01.T01:intron | 35.0% | |
| ACGGAGATAACAATTTGCAA+TGG | - | Chr6:6007743-6007762 | None:intergenic | 35.0% | |
| AGATATGATTGTGGCAGTTA+TGG | - | Chr6:6007124-6007143 | None:intergenic | 35.0% | |
| AGGACTAAAGTTAGTTCATC+AGG | - | Chr6:6007093-6007112 | None:intergenic | 35.0% | |
| ATATATATTGGACCACGGTT+CGG | - | Chr6:6007480-6007499 | None:intergenic | 35.0% | |
| ATGAACTGTCAGTCACATTT+CGG | + | Chr6:6007985-6008004 | MsG0680030606.01.T01:intron | 35.0% | |
| ATTGCTTATGCTTATGCTGT+TGG | + | Chr6:6004631-6004650 | MsG0680030606.01.T01:CDS | 35.0% | |
| ATTGTTATCTCCGTTTGGTT+GGG | + | Chr6:6007749-6007768 | MsG0680030606.01.T01:CDS | 35.0% | |
| ATTGTTCATTCCTTGAAGTG+TGG | - | Chr6:6004602-6004621 | None:intergenic | 35.0% | |
| CAGTCAATTTGACGAAATCA+TGG | - | Chr6:6004854-6004873 | None:intergenic | 35.0% | |
| CCAATTGTGTGTCAAATATC+CGG | - | Chr6:6005192-6005211 | None:intergenic | 35.0% | |
| CTTCATATATAAGACGTGTC+TGG | - | Chr6:6006786-6006805 | None:intergenic | 35.0% | |
| GAAACCGAACCAAATCTAAT+AGG | + | Chr6:6007850-6007869 | MsG0680030606.01.T01:intron | 35.0% | |
| GAGTAGAAGTAGTAATGCTA+AGG | + | Chr6:6006400-6006419 | MsG0680030606.01.T01:CDS | 35.0% | |
| GATGTTAGTCCATAGATCAA+AGG | + | Chr6:6006246-6006265 | MsG0680030606.01.T01:intron | 35.0% | |
| GGACTAAAGTTAGTTCATCA+GGG | - | Chr6:6007092-6007111 | None:intergenic | 35.0% | |
| GGAGCCATAATAATCTCAAT+TGG | + | Chr6:6008104-6008123 | MsG0680030606.01.T01:CDS | 35.0% | |
| GGTCTTTATGCTGTATTATG+GGG | + | Chr6:6008125-6008144 | MsG0680030606.01.T01:CDS | 35.0% | |
| GGTTGAACTGTCTTCTAAAT+AGG | + | Chr6:6005289-6005308 | MsG0680030606.01.T01:intron | 35.0% | |
| GTCAACGATGTTCAAAATTG+TGG | + | Chr6:6007551-6007570 | MsG0680030606.01.T01:intron | 35.0% | |
| TATCATACACCATATTTCGG+TGG | - | Chr6:6005096-6005115 | None:intergenic | 35.0% | |
| TATGATTCTGACAAACTCAC+CGG | - | Chr6:6004770-6004789 | None:intergenic | 35.0% | |
| TCAACCTCGTGTGAAAAATT+TGG | - | Chr6:6005275-6005294 | None:intergenic | 35.0% | |
| TCAGAAACATGACAAGAAGA+TGG | + | Chr6:6004491-6004510 | MsG0680030606.01.T01:exon | 35.0% | |
| TCATAGCATATAATCACAGC+AGG | - | Chr6:6004541-6004560 | None:intergenic | 35.0% | |
| TGAAAATAACCGAACTGTGA+TGG | + | Chr6:6007918-6007937 | MsG0680030606.01.T01:intron | 35.0% | |
| TGCAAATTGTTATCTCCGTT+TGG | + | Chr6:6007744-6007763 | MsG0680030606.01.T01:CDS | 35.0% | |
| TGGCAAAACATCCATGTAAA+AGG | - | Chr6:6004518-6004537 | None:intergenic | 35.0% | |
| TGGCAGTTATGGAATATATC+AGG | - | Chr6:6007113-6007132 | None:intergenic | 35.0% | |
| TTAGTGCATGTTTGAATTGC+CGG | + | Chr6:6004748-6004767 | MsG0680030606.01.T01:intron | 35.0% | |
| TTCTAGCATCAGTGTATGTT+TGG | + | Chr6:6006945-6006964 | MsG0680030606.01.T01:intron | 35.0% | |
| ! | AAGAAGATGGTCCTTTTACA+TGG | + | Chr6:6004504-6004523 | MsG0680030606.01.T01:CDS | 35.0% |
| ! | AATTGACTTTCTCAAGTCTG+TGG | + | Chr6:6006514-6006533 | MsG0680030606.01.T01:CDS | 35.0% |
| ! | ACATCCAAATTTTTCACACG+AGG | + | Chr6:6005268-6005287 | MsG0680030606.01.T01:intron | 35.0% |
| ! | ATAGTGTTCCACCGAAATTT+TGG | + | Chr6:6004787-6004806 | MsG0680030606.01.T01:intron | 35.0% |
| ! | ATATGCAAAAGTGTGCTTCT+TGG | + | Chr6:6004987-6005006 | MsG0680030606.01.T01:CDS | 35.0% |
| ! | CAGTCCTATTAGATTTGGTT+CGG | - | Chr6:6007857-6007876 | None:intergenic | 35.0% |
| ! | CGATAACACTTTCTTTTCCA+GGG | + | Chr6:6007635-6007654 | MsG0680030606.01.T01:intron | 35.0% |
| ! | GCTGACAATTGACTATTTTC+TGG | + | Chr6:6006565-6006584 | MsG0680030606.01.T01:CDS | 35.0% |
| ! | GGAAGCATAATATCAATAGC+AGG | + | Chr6:6006428-6006447 | MsG0680030606.01.T01:CDS | 35.0% |
| ! | TATGCAAAAGTGTGCTTCTT+GGG | + | Chr6:6004988-6005007 | MsG0680030606.01.T01:CDS | 35.0% |
| ! | TCGATAACACTTTCTTTTCC+AGG | + | Chr6:6007634-6007653 | MsG0680030606.01.T01:intron | 35.0% |
| ! | TTCGCTATGGTACATTTTAC+AGG | + | Chr6:6006589-6006608 | MsG0680030606.01.T01:CDS | 35.0% |
| ! | TTCTTTTCCAGGGAATTTTC+GGG | + | Chr6:6007645-6007664 | MsG0680030606.01.T01:intron | 35.0% |
| !! | AATTGGTTGATGAAGTGATG+AGG | - | Chr6:6006498-6006517 | None:intergenic | 35.0% |
| !! | ATTGGTTGATGAAGTGATGA+GGG | - | Chr6:6006497-6006516 | None:intergenic | 35.0% |
| !! | GGAATTTTCGGGAAGTTAAT+AGG | + | Chr6:6007656-6007675 | MsG0680030606.01.T01:CDS | 35.0% |
| !! | TCCTGAAATTTTGGAGAGTT+TGG | - | Chr6:6005385-6005404 | None:intergenic | 35.0% |
| !! | TTGTGGTTAACTGTTTTGAG+TGG | + | Chr6:6007568-6007587 | MsG0680030606.01.T01:intron | 35.0% |
| !!! | ACTATTTTCTGGTTTCGCTA+TGG | + | Chr6:6006576-6006595 | MsG0680030606.01.T01:CDS | 35.0% |
| !!! | GTACAGTTTTTTAGGGAACT+CGG | - | Chr6:6005346-6005365 | None:intergenic | 35.0% |
| !!! | TACAGTTTTTTAGGGAACTC+GGG | - | Chr6:6005345-6005364 | None:intergenic | 35.0% |
| AAGAACCTGAGTTCGATTGT+TGG | - | Chr6:6005320-6005339 | None:intergenic | 40.0% | |
| AAGTGATGAGGGATTCATGA+TGG | - | Chr6:6006486-6006505 | None:intergenic | 40.0% | |
| ACACCTTCAATCAGAAGAGT+CGG | - | Chr6:6005430-6005449 | None:intergenic | 40.0% | |
| ACTCTTCATCTTGGAAGGTA+TGG | + | Chr6:6007791-6007810 | MsG0680030606.01.T01:intron | 40.0% | |
| AGATGTGCATCTCAGATTCT+GGG | + | Chr6:6005721-6005740 | MsG0680030606.01.T01:intron | 40.0% | |
| AGGCAATATAGTTTCTGCCT+GGG | + | Chr6:6007676-6007695 | MsG0680030606.01.T01:CDS | 40.0% | |
| ATGGATAAAGTGATTGGAGG+AGG | - | Chr6:6004966-6004985 | None:intergenic | 40.0% | |
| ATGTAGTCGACCTTACTTAC+TGG | + | Chr6:6005140-6005159 | MsG0680030606.01.T01:intron | 40.0% | |
| ATTGTGTGTCAAATATCCGG+TGG | - | Chr6:6005189-6005208 | None:intergenic | 40.0% | |
| CAAAGCAACAGAAGAGATAG+AGG | + | Chr6:6008148-6008167 | MsG0680030606.01.T01:CDS | 40.0% | |
| CAGTTCCAAATTCAAGTGCT+TGG | + | Chr6:6007163-6007182 | MsG0680030606.01.T01:CDS | 40.0% | |
| CCGGATATTTGACACACAAT+TGG | + | Chr6:6005189-6005208 | MsG0680030606.01.T01:intron | 40.0% | |
| CTAAGATATCTCCAGGACAT+AGG | + | Chr6:6005216-6005235 | MsG0680030606.01.T01:intron | 40.0% | |
| GAAGAGATAGAGGAAGATGT+TGG | + | Chr6:6008158-6008177 | MsG0680030606.01.T01:CDS | 40.0% | |
| GAATATAACGCCCAACCAAA+CGG | - | Chr6:6007762-6007781 | None:intergenic | 40.0% | |
| GCTGTTAATCCACCGAAATA+TGG | + | Chr6:6005084-6005103 | MsG0680030606.01.T01:intron | 40.0% | |
| GTGATACTCTTCATCTTGGA+AGG | + | Chr6:6007786-6007805 | MsG0680030606.01.T01:CDS | 40.0% | |
| TAGCATATAATCACAGCAGG+TGG | - | Chr6:6004538-6004557 | None:intergenic | 40.0% | |
| TAGGCAATATAGTTTCTGCC+TGG | + | Chr6:6007675-6007694 | MsG0680030606.01.T01:CDS | 40.0% | |
| TGTAGTCGACCTTACTTACT+GGG | + | Chr6:6005141-6005160 | MsG0680030606.01.T01:intron | 40.0% | |
| TGTGTATCTGAACACGTGAA+AGG | - | Chr6:6007439-6007458 | None:intergenic | 40.0% | |
| TTAACTTCCCGAAAATTCCC+TGG | - | Chr6:6007655-6007674 | None:intergenic | 40.0% | |
| TTACTTACTGGGAAAAGGCT+TGG | + | Chr6:6005152-6005171 | MsG0680030606.01.T01:intron | 40.0% | |
| TTGTGGTGAATTGTGTGTAG+TGG | - | Chr6:6007400-6007419 | None:intergenic | 40.0% | |
| ! | AAAGTGTTTGAGTGTGACTG+TGG | - | Chr6:6005994-6006013 | None:intergenic | 40.0% |
| ! | AAGCCTTTTCCCAGTAAGTA+AGG | - | Chr6:6005153-6005172 | None:intergenic | 40.0% |
| ! | ATGCAAAAGTGTGCTTCTTG+GGG | + | Chr6:6004989-6005008 | MsG0680030606.01.T01:CDS | 40.0% |
| ! | GCTCTATAGCTTTGCAAAAG+AGG | - | Chr6:6008215-6008234 | None:intergenic | 40.0% |
| ! | GTTTTGTCAATTACGGATCG+CGG | + | Chr6:6006029-6006048 | MsG0680030606.01.T01:intron | 40.0% |
| !! | GGTTAACTGTTTTGAGTGGA+TGG | + | Chr6:6007572-6007591 | MsG0680030606.01.T01:intron | 40.0% |
| !! | TATTTCGGTGGATTAACAGC+AGG | - | Chr6:6005084-6005103 | None:intergenic | 40.0% |
| !! | TCATGCTAGCTGTTACTTTC+AGG | + | Chr6:6005815-6005834 | MsG0680030606.01.T01:CDS | 40.0% |
| AATCAGAAGAGTCGGTGCAT+AGG | - | Chr6:6005422-6005441 | None:intergenic | 45.0% | |
| AGGCCTTAACCTATGAAGCA+CGG | - | Chr6:6005573-6005592 | None:intergenic | 45.0% | |
| AGTGAAAGCAGGTACCAGAT+TGG | - | Chr6:6005794-6005813 | None:intergenic | 45.0% | |
| CAAGTCTGTGGATTCAAGCT+GGG | + | Chr6:6006526-6006545 | MsG0680030606.01.T01:CDS | 45.0% | |
| CACAAGTGTCTGTGTTGTGT+CGG | - | Chr6:6005463-6005482 | None:intergenic | 45.0% | |
| CAGATGTGCATCTCAGATTC+TGG | + | Chr6:6005720-6005739 | MsG0680030606.01.T01:intron | 45.0% | |
| CCTGGGCAATACACTTAAAG+GGG | + | Chr6:6007693-6007712 | MsG0680030606.01.T01:CDS | 45.0% | |
| CGACCTTACTTACTGGGAAA+AGG | + | Chr6:6005147-6005166 | MsG0680030606.01.T01:intron | 45.0% | |
| CTCGGTGATACTCTTCATCT+TGG | + | Chr6:6007782-6007801 | MsG0680030606.01.T01:CDS | 45.0% | |
| CTGGGCAATACACTTAAAGG+GGG | + | Chr6:6007694-6007713 | MsG0680030606.01.T01:CDS | 45.0% | |
| CTTCTGGTGAAAAGAGTGAC+AGG | - | Chr6:6004673-6004692 | None:intergenic | 45.0% | |
| GAGATGCACATCTGCATAAC+AGG | - | Chr6:6005714-6005733 | None:intergenic | 45.0% | |
| GATGTGCATCTCAGATTCTG+GGG | + | Chr6:6005722-6005741 | MsG0680030606.01.T01:intron | 45.0% | |
| GCAATTGCTGAAGCAAGTGT+TGG | - | Chr6:6005772-6005791 | None:intergenic | 45.0% | |
| GCCTGGGCAATACACTTAAA+GGG | + | Chr6:6007692-6007711 | MsG0680030606.01.T01:CDS | 45.0% | |
| GCTAGCATGAAAGTGAAAGC+AGG | - | Chr6:6005805-6005824 | None:intergenic | 45.0% | |
| GCTATAGCACTGTTGCATAG+CGG | - | Chr6:6006077-6006096 | None:intergenic | 45.0% | |
| GTGAGCTATCCATCACAGTT+CGG | - | Chr6:6007930-6007949 | None:intergenic | 45.0% | |
| TCAAGTCTGTGGATTCAAGC+TGG | + | Chr6:6006525-6006544 | MsG0680030606.01.T01:CDS | 45.0% | |
| TCACGAACTTAACTGAACCG+AGG | + | Chr6:6007946-6007965 | MsG0680030606.01.T01:intron | 45.0% | |
| TCTGTGTTGTGTCGGACATA+GGG | - | Chr6:6005455-6005474 | None:intergenic | 45.0% | |
| TGACTCCAACAATCGAACTC+AGG | + | Chr6:6005312-6005331 | MsG0680030606.01.T01:intron | 45.0% | |
| TGCCTGGGCAATACACTTAA+AGG | + | Chr6:6007691-6007710 | MsG0680030606.01.T01:CDS | 45.0% | |
| TGCTTCAGCAATTGCCAATC+TGG | + | Chr6:6005777-6005796 | MsG0680030606.01.T01:CDS | 45.0% | |
| TGGCATGCTAAGATATCTCC+AGG | + | Chr6:6005209-6005228 | MsG0680030606.01.T01:intron | 45.0% | |
| TGGTTGGGCGTTATATTCCT+CGG | + | Chr6:6007764-6007783 | MsG0680030606.01.T01:CDS | 45.0% | |
| TGTCCGTGCTTCATAGGTTA+AGG | + | Chr6:6005567-6005586 | MsG0680030606.01.T01:intron | 45.0% | |
| TTCAAAGCAGCCACACTTCA+AGG | + | Chr6:6004589-6004608 | MsG0680030606.01.T01:CDS | 45.0% | |
| TTGCGATTACCACAGCTCAA+AGG | + | Chr6:6007354-6007373 | MsG0680030606.01.T01:intron | 45.0% | |
| ! | AGAGGTGCATTCTCAGTAGA+TGG | - | Chr6:6008197-6008216 | None:intergenic | 45.0% |
| ! | CTGTCACTCTTTTCACCAGA+AGG | + | Chr6:6004671-6004690 | MsG0680030606.01.T01:CDS | 45.0% |
| ! | GATGTGTCACTGCCTATTCA+AGG | - | Chr6:6005253-6005272 | None:intergenic | 45.0% |
| ! | TTAACTGAACCGAGGTGCTT+CGG | + | Chr6:6007954-6007973 | MsG0680030606.01.T01:intron | 45.0% |
| !! | AGAGGAAGATGTTGGTAGCT+TGG | + | Chr6:6008166-6008185 | MsG0680030606.01.T01:CDS | 45.0% |
| !! | CAAGATGAAGAGTATCACCG+AGG | - | Chr6:6007784-6007803 | None:intergenic | 45.0% |
| !! | CTTGGTTGTTGGTAATCCAC+CGG | + | Chr6:6005170-6005189 | MsG0680030606.01.T01:intron | 45.0% |
| !! | TGAAGCAAGTGTTGGAGAAC+TGG | - | Chr6:6005764-6005783 | None:intergenic | 45.0% |
| AGTGTGCTTCTTGGGGCAAT+AGG | + | Chr6:6004996-6005015 | MsG0680030606.01.T01:CDS | 50.0% | |
| ATGAAGCACGGACACAGACA+CGG | - | Chr6:6005561-6005580 | None:intergenic | 50.0% | |
| CCCCTTTAAGTGTATTGCCC+AGG | - | Chr6:6007696-6007715 | None:intergenic | 50.0% | |
| CTGTCAGTCACATTTCGGTG+CGG | + | Chr6:6007990-6008009 | MsG0680030606.01.T01:intron | 50.0% | |
| GTCTGTGTTGTGTCGGACAT+AGG | - | Chr6:6005456-6005475 | None:intergenic | 50.0% | |
| GTGTGCTTCTTGGGGCAATA+GGG | + | Chr6:6004997-6005016 | MsG0680030606.01.T01:CDS | 50.0% | |
| GTTGCAACACCTTTGAGCTG+TGG | - | Chr6:6007366-6007385 | None:intergenic | 50.0% | |
| TCCATTAACCATCCGAACCG+TGG | + | Chr6:6007465-6007484 | MsG0680030606.01.T01:intron | 50.0% | |
| TGTCAGCAGAATGCCAGCAA+TGG | - | Chr6:6006552-6006571 | None:intergenic | 50.0% | |
| TGTCTGTGTCCGTGCTTCAT+AGG | + | Chr6:6005561-6005580 | MsG0680030606.01.T01:intron | 50.0% | |
| TTACGGATCGCGGAGAATAG+AGG | + | Chr6:6006039-6006058 | MsG0680030606.01.T01:intron | 50.0% | |
| ! | ACCACGGTTCGGATGGTTAA+TGG | - | Chr6:6007469-6007488 | None:intergenic | 50.0% |
| ! | ATATTGGACCACGGTTCGGA+TGG | - | Chr6:6007476-6007495 | None:intergenic | 50.0% |
| ! | CTGGGAAAAGGCTTGGTTGT+TGG | + | Chr6:6005159-6005178 | MsG0680030606.01.T01:intron | 50.0% |
| ! | TGAACTGAACCGAAGCACCT+CGG | - | Chr6:6007966-6007985 | None:intergenic | 50.0% |
| !! | GCACCGACTCTTCTGATTGA+AGG | + | Chr6:6005424-6005443 | MsG0680030606.01.T01:intron | 50.0% |
| !! | TATCGGTGTCAACGTGTCTG+TGG | + | Chr6:6005517-6005536 | MsG0680030606.01.T01:intron | 50.0% |
| GATTCAAGCTGGGCCATTGC+TGG | + | Chr6:6006536-6006555 | MsG0680030606.01.T01:CDS | 55.0% | |
| GTCTGTGGCAGTGTCATGTC+TGG | + | Chr6:6005532-6005551 | MsG0680030606.01.T01:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 6004447 | 6008271 | 6004447 | ID=MsG0680030606.01;Name=MsG0680030606.01 |
| Chr6 | mRNA | 6004447 | 6008271 | 6004447 | ID=MsG0680030606.01.T01;Parent=MsG0680030606.01;Name=MsG0680030606.01.T01;_AED=0.48;_eAED=0.49;_QI=52|0.83|0.85|1|1|1|7|0|364 |
| Chr6 | exon | 6004447 | 6004692 | 6004447 | ID=MsG0680030606.01.T01:exon:5877;Parent=MsG0680030606.01.T01 |
| Chr6 | exon | 6004950 | 6005018 | 6004950 | ID=MsG0680030606.01.T01:exon:5878;Parent=MsG0680030606.01.T01 |
| Chr6 | exon | 6005723 | 6005836 | 6005723 | ID=MsG0680030606.01.T01:exon:5879;Parent=MsG0680030606.01.T01 |
| Chr6 | exon | 6006379 | 6006610 | 6006379 | ID=MsG0680030606.01.T01:exon:5880;Parent=MsG0680030606.01.T01 |
| Chr6 | exon | 6007069 | 6007227 | 6007069 | ID=MsG0680030606.01.T01:exon:5881;Parent=MsG0680030606.01.T01 |
| Chr6 | exon | 6007656 | 6007807 | 6007656 | ID=MsG0680030606.01.T01:exon:5882;Parent=MsG0680030606.01.T01 |
| Chr6 | exon | 6008097 | 6008271 | 6008097 | ID=MsG0680030606.01.T01:exon:5883;Parent=MsG0680030606.01.T01 |
| Chr6 | five_prime_UTR | 6004447 | 6004498 | 6004447 | ID=MsG0680030606.01.T01:five_prime_utr;Parent=MsG0680030606.01.T01 |
| Chr6 | CDS | 6004499 | 6004692 | 6004499 | ID=MsG0680030606.01.T01:cds;Parent=MsG0680030606.01.T01 |
| Chr6 | CDS | 6004950 | 6005018 | 6004950 | ID=MsG0680030606.01.T01:cds;Parent=MsG0680030606.01.T01 |
| Chr6 | CDS | 6005723 | 6005836 | 6005723 | ID=MsG0680030606.01.T01:cds;Parent=MsG0680030606.01.T01 |
| Chr6 | CDS | 6006379 | 6006610 | 6006379 | ID=MsG0680030606.01.T01:cds;Parent=MsG0680030606.01.T01 |
| Chr6 | CDS | 6007069 | 6007227 | 6007069 | ID=MsG0680030606.01.T01:cds;Parent=MsG0680030606.01.T01 |
| Chr6 | CDS | 6007656 | 6007807 | 6007656 | ID=MsG0680030606.01.T01:cds;Parent=MsG0680030606.01.T01 |
| Chr6 | CDS | 6008097 | 6008271 | 6008097 | ID=MsG0680030606.01.T01:cds;Parent=MsG0680030606.01.T01 |
| Gene Sequence |
| Protein sequence |
