AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042459.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042459.01.T01 MTR_8g014690 93.488 215 14 0 1 215 8 222 1.96e-140 414
MsG0880042459.01.T01 MTR_8g014690 88.571 140 16 0 205 344 491 630 2.51e-69 230
MsG0880042459.01.T01 MTR_8g014690 93.488 215 14 0 1 215 1 215 1.74e-138 414
MsG0880042459.01.T01 MTR_8g014690 93.893 131 8 0 206 336 485 615 2.67e-68 229
MsG0880042459.01.T01 MTR_8g014700 80.861 209 39 1 5 213 10 217 5.47e-114 345
MsG0880042459.01.T01 MTR_8g014700 80.916 131 21 2 206 336 491 617 5.13e-62 209
MsG0880042459.01.T01 MTR_8g014790 80.861 209 39 1 6 213 7 215 8.92e-114 350
MsG0880042459.01.T01 MTR_8g014790 80.800 125 21 1 212 336 493 614 2.59e-59 205
MsG0880042459.01.T01 MTR_8g014700 80.861 209 39 1 5 213 10 217 1.97e-112 347
MsG0880042459.01.T01 MTR_8g014700 80.916 131 21 2 206 336 491 617 3.13e-61 210
MsG0880042459.01.T01 MTR_8g014700 80.861 209 39 1 5 213 10 217 5.60e-112 346
MsG0880042459.01.T01 MTR_8g014700 80.916 131 21 2 206 336 491 617 5.09e-61 210
MsG0880042459.01.T01 MTR_8g014730 75.120 209 52 0 5 213 10 218 1.83e-107 328
MsG0880042459.01.T01 MTR_8g014730 77.600 125 24 2 212 336 491 611 4.96e-55 191
MsG0880042459.01.T01 MTR_8g014760 73.684 209 51 3 5 213 10 214 5.63e-102 311
MsG0880042459.01.T01 MTR_8g014760 77.273 44 10 0 212 255 492 535 1.44e-14 75.1
MsG0880042459.01.T01 MTR_8g014760 73.684 209 51 3 5 213 10 214 4.02e-101 311
MsG0880042459.01.T01 MTR_8g014760 76.296 135 29 1 212 346 492 623 2.66e-63 212
MsG0880042459.01.T01 MTR_8g014930 77.949 195 38 2 19 213 24 213 7.34e-101 311
MsG0880042459.01.T01 MTR_8g014930 49.206 126 22 2 212 336 493 577 1.44e-27 114
MsG0880042459.01.T01 MTR_8g014930 77.949 195 38 2 19 213 24 213 1.36e-100 311
MsG0880042459.01.T01 MTR_8g014930 73.810 126 30 2 212 336 493 616 2.17e-55 192
MsG0880042459.01.T01 MTR_8g015150 73.810 210 47 3 5 213 6 208 1.48e-100 310
MsG0880042459.01.T01 MTR_8g015150 76.190 126 23 2 212 336 487 606 2.44e-50 178
MsG0880042459.01.T01 MTR_8g014760 73.684 209 51 3 5 213 10 214 1.95e-100 311
MsG0880042459.01.T01 MTR_8g014760 71.429 133 35 1 212 344 492 621 7.27e-55 191
MsG0880042459.01.T01 MTR_8g015150 73.810 210 47 3 5 213 6 208 2.70e-100 310
MsG0880042459.01.T01 MTR_8g015150 76.190 126 23 2 212 336 487 606 3.74e-50 178
MsG0880042459.01.T01 MTR_8g014930 77.949 195 38 2 19 213 24 213 2.38e-99 311
MsG0880042459.01.T01 MTR_8g014930 49.206 126 22 2 212 336 493 577 1.37e-27 114
MsG0880042459.01.T01 MTR_8g014930 77.949 195 38 2 19 213 19 208 3.51e-99 312
MsG0880042459.01.T01 MTR_8g014930 73.810 126 30 2 212 336 488 611 8.95e-55 192
MsG0880042459.01.T01 MTR_8g461120 64.202 257 75 8 1 243 16 269 4.32e-99 308
MsG0880042459.01.T01 MTR_8g461120 64.800 125 36 2 212 336 509 625 6.17e-40 149
MsG0880042459.01.T01 MTR_8g014760 73.684 209 51 3 5 213 6 210 4.80e-99 311
MsG0880042459.01.T01 MTR_8g014760 71.429 133 35 1 212 344 488 617 4.59e-54 190
MsG0880042459.01.T01 MTR_8g015150 73.810 210 47 3 5 213 6 208 1.18e-98 310
MsG0880042459.01.T01 MTR_8g015150 76.190 126 23 2 212 336 487 606 1.28e-49 178
MsG0880042459.01.T01 MTR_8g461120 64.202 257 75 8 1 243 16 269 4.74e-98 308
MsG0880042459.01.T01 MTR_8g461120 64.800 125 36 2 212 336 485 601 9.20e-40 149
MsG0880042459.01.T01 MTR_8g461120 64.202 257 75 8 1 243 16 269 6.85e-98 308
MsG0880042459.01.T01 MTR_8g461120 64.800 125 36 2 212 336 509 625 9.48e-40 149
MsG0880042459.01.T01 MTR_8g028110 67.982 228 68 4 5 229 10 235 1.13e-93 298
MsG0880042459.01.T01 MTR_8g028110 73.600 125 28 1 212 336 499 618 8.56e-44 161
MsG0880042459.01.T01 MTR_8g015190 66.071 224 61 4 1 213 14 233 1.04e-92 296
MsG0880042459.01.T01 MTR_8g015190 56.934 137 42 2 212 336 517 648 2.98e-33 130
MsG0880042459.01.T01 MTR_8g015190 66.071 224 61 4 1 213 4 223 6.36e-91 295
MsG0880042459.01.T01 MTR_8g015190 60.256 234 56 3 5 208 984 1210 8.80e-77 256
MsG0880042459.01.T01 MTR_8g015190 56.934 137 42 2 212 336 507 638 3.23e-33 130
MsG0880042459.01.T01 MTR_8g014840 67.143 210 49 3 5 213 5 195 5.33e-88 268
MsG0880042459.01.T01 MTR_8g015340 71.429 210 57 3 5 213 19 226 4.62e-87 281
MsG0880042459.01.T01 MTR_8g015340 35.172 145 81 3 212 344 508 651 1.58e-18 87.4
MsG0880042459.01.T01 MTR_8g015200 68.817 186 57 1 29 213 10 195 7.32e-85 274
MsG0880042459.01.T01 MTR_8g015200 77.600 125 23 1 212 336 469 588 1.72e-56 197
MsG0880042459.01.T01 MTR_8g014860 80.000 125 22 1 212 336 15 136 8.70e-65 204
MsG0880042459.01.T01 MTR_8g014860 80.000 125 22 1 212 336 15 136 8.90e-64 204
MsG0880042459.01.T01 MTR_8g015150 76.190 126 23 2 212 336 242 361 9.25e-51 178
MsG0880042459.01.T01 MTR_6g090605 45.050 202 105 2 7 202 16 217 1.14e-49 171
MsG0880042459.01.T01 MTR_2g100450 48.276 203 94 6 6 202 4 201 1.78e-48 174
MsG0880042459.01.T01 MTR_2g100450 38.519 135 77 2 218 346 496 630 1.02e-21 96.7
MsG0880042459.01.T01 MTR_2g100450 48.276 203 94 6 6 202 4 201 2.58e-48 174
MsG0880042459.01.T01 MTR_2g100450 38.519 135 77 2 218 346 496 630 1.15e-21 96.7
MsG0880042459.01.T01 MTR_8g015040 67.669 133 37 2 204 336 537 663 6.55e-48 173
MsG0880042459.01.T01 MTR_8g015040 38.384 198 109 4 21 207 51 246 4.19e-32 127
MsG0880042459.01.T01 MTR_8g015010 69.118 136 38 2 204 336 527 661 9.79e-48 172
MsG0880042459.01.T01 MTR_8g015010 37.879 198 102 6 21 204 43 233 3.34e-28 116
MsG0880042459.01.T01 MTR_8g014970 70.677 133 33 2 204 336 251 377 5.98e-47 168
MsG0880042459.01.T01 MTR_6g090615 46.040 202 100 3 7 202 10 208 8.89e-46 167
MsG0880042459.01.T01 MTR_6g090615 35.714 140 85 3 206 344 490 625 3.99e-18 86.3
MsG0880042459.01.T01 MTR_2g100470 45.789 190 95 3 27 213 13 197 1.00e-45 166
MsG0880042459.01.T01 MTR_2g100470 36.090 133 79 3 218 346 478 608 1.95e-19 90.1
MsG0880042459.01.T01 MTR_8g015100 70.732 123 32 2 218 336 187 309 1.49e-42 155
MsG0880042459.01.T01 MTR_8g015100 70.732 123 32 2 218 336 404 526 9.96e-42 155
MsG0880042459.01.T01 MTR_8g015100 38.095 210 117 5 21 219 48 255 1.22e-33 132
MsG0880042459.01.T01 MTR_8g015170 66.957 115 31 2 212 326 102 209 2.67e-38 141
MsG0880042459.01.T01 MTR_8g014980 40.000 185 98 4 28 201 14 196 3.49e-33 122
MsG0880042459.01.T01 MTR_1g066950 32.692 208 133 4 28 233 26 228 1.98e-28 116
MsG0880042459.01.T01 MTR_7g100630 33.019 212 135 5 24 233 28 234 1.69e-27 114
MsG0880042459.01.T01 MTR_3g086120 35.393 178 110 4 29 204 25 199 2.12e-26 110
MsG0880042459.01.T01 MTR_3g086120 35.393 178 110 4 29 204 25 199 2.80e-26 110
MsG0880042459.01.T01 MTR_5g058090 38.788 165 90 5 27 182 37 199 9.79e-26 108
MsG0880042459.01.T01 MTR_5g058090 43.796 137 71 4 202 335 497 630 1.07e-18 87.8
MsG0880042459.01.T01 MTR_6g071455 36.413 184 108 6 29 211 26 201 4.83e-25 106
MsG0880042459.01.T01 MTR_6g071455 36.413 184 108 6 29 211 26 201 1.29e-24 105
MsG0880042459.01.T01 MTR_2g100450 38.519 135 77 2 218 346 291 425 1.38e-21 96.3
MsG0880042459.01.T01 MTR_7g057170 29.952 207 128 11 14 211 12 210 1.55e-15 78.2
MsG0880042459.01.T01 MTR_7g057170 29.952 207 128 11 14 211 12 210 1.59e-15 78.2
MsG0880042459.01.T01 MTR_8g037700 28.417 278 162 9 91 346 325 587 4.25e-14 73.9
MsG0880042459.01.T01 MTR_1g104890 39.130 115 65 3 224 335 277 389 2.50e-13 70.9
MsG0880042459.01.T01 MTR_6g052970 35.246 122 72 4 217 335 12 129 2.89e-13 70.1
MsG0880042459.01.T01 MTR_4g109010 30.198 202 98 7 184 346 396 593 3.37e-13 71.2
MsG0880042459.01.T01 MTR_1g104890 39.130 115 65 3 224 335 277 389 3.52e-13 70.9
MsG0880042459.01.T01 MTR_1g104890 39.130 115 65 3 224 335 277 389 4.05e-13 70.9
MsG0880042459.01.T01 MTR_4g061833 23.373 338 192 8 46 346 98 405 4.24e-13 70.9
MsG0880042459.01.T01 MTR_4g061833 23.373 338 192 8 46 346 249 556 5.77e-13 70.5
MsG0880042459.01.T01 MTR_4g061930 23.373 338 192 8 46 346 249 556 5.77e-13 70.5
MsG0880042459.01.T01 MTR_4g130210 36.752 117 69 4 224 336 161 276 9.84e-13 69.3
MsG0880042459.01.T01 MTR_6g055960 40.000 100 56 3 239 335 514 612 1.02e-12 69.7
MsG0880042459.01.T01 MTR_4g086250 27.778 270 168 9 9 268 15 267 1.27e-12 68.9
MsG0880042459.01.T01 MTR_4g130210 36.752 117 69 4 224 336 227 342 1.29e-12 69.3
MsG0880042459.01.T01 MTR_2g103810 34.513 113 71 2 225 335 426 537 1.98e-12 68.9
MsG0880042459.01.T01 MTR_6g053000 39.000 100 57 3 239 335 286 384 1.99e-12 68.6
MsG0880042459.01.T01 MTR_0090s0020 34.677 124 71 4 229 344 431 552 2.48e-12 68.6
MsG0880042459.01.T01 MTR_0090s0020 34.677 124 71 4 229 344 431 552 2.51e-12 68.6
MsG0880042459.01.T01 MTR_0090s0020 34.677 124 71 4 229 344 431 552 2.65e-12 68.2
MsG0880042459.01.T01 MTR_0090s0020 34.959 123 70 4 230 344 432 552 2.69e-12 68.2
MsG0880042459.01.T01 MTR_3g007510 34.127 126 80 2 222 344 446 571 3.55e-12 68.2
MsG0880042459.01.T01 MTR_6g463710 38.384 99 59 1 239 335 521 619 3.92e-12 67.8
MsG0880042459.01.T01 MTR_6g057770 38.384 99 59 1 239 335 521 619 3.96e-12 67.8
MsG0880042459.01.T01 MTR_1g020060 52.632 57 27 0 279 335 38 94 9.17e-12 65.9
MsG0880042459.01.T01 MTR_4g091820 31.250 128 78 4 225 344 462 587 9.33e-12 66.6
MsG0880042459.01.T01 MTR_3g007630 32.800 125 81 2 225 346 445 569 9.70e-12 66.6
MsG0880042459.01.T01 MTR_7g056420 30.000 160 97 4 190 335 728 886 1.11e-11 66.6
MsG0880042459.01.T01 MTR_7g056430 30.000 160 97 4 190 335 728 886 1.11e-11 66.6
MsG0880042459.01.T01 MTR_4g091680 33.065 124 72 3 229 344 436 556 1.17e-11 66.2
MsG0880042459.01.T01 MTR_5g025020 30.660 212 111 12 150 344 232 424 1.57e-11 65.9
MsG0880042459.01.T01 MTR_8g041910 37.838 111 57 3 237 335 286 396 1.92e-11 65.5
MsG0880042459.01.T01 MTR_6g463830 38.000 100 58 3 239 335 520 618 2.08e-11 65.5
MsG0880042459.01.T01 MTR_7g015280 37.097 124 71 3 220 336 438 561 2.39e-11 65.5
MsG0880042459.01.T01 MTR_2g100550 33.333 102 62 3 218 313 266 367 2.97e-11 65.1
MsG0880042459.01.T01 MTR_4g061570 49.153 59 30 0 278 336 83 141 3.13e-11 64.3
MsG0880042459.01.T01 MTR_7g074010 36.607 112 66 3 228 336 379 488 3.23e-11 65.1
MsG0880042459.01.T01 MTR_6g048090 29.448 163 84 4 209 346 396 552 3.58e-11 64.7
MsG0880042459.01.T01 MTR_7g074010 36.607 112 66 3 228 336 558 667 3.68e-11 65.1
MsG0880042459.01.T01 MTR_3g007650 34.579 107 61 3 249 346 475 581 3.76e-11 64.7
MsG0880042459.01.T01 MTR_7g074010 36.607 112 66 3 228 336 513 622 3.86e-11 64.7
MsG0880042459.01.T01 MTR_7g015250 36.478 159 81 7 192 336 413 565 3.96e-11 64.7
MsG0880042459.01.T01 MTR_8g465980 37.624 101 60 2 247 344 445 545 4.13e-11 64.7
MsG0880042459.01.T01 MTR_8g028065 37.624 101 57 3 239 335 518 616 4.55e-11 64.7
MsG0880042459.01.T01 MTR_3g011930 37.615 109 58 3 237 335 133 241 4.65e-11 64.3
MsG0880042459.01.T01 MTR_5g053610 27.556 225 143 8 2 216 3 217 6.15e-11 63.9
MsG0880042459.01.T01 MTR_5g067250 49.254 67 32 1 280 344 490 556 6.35e-11 63.9
MsG0880042459.01.T01 MTR_4g091840 31.250 128 78 4 225 344 464 589 6.40e-11 64.3
MsG0880042459.01.T01 MTR_8g013620 33.333 120 72 4 221 335 434 550 6.81e-11 63.9
MsG0880042459.01.T01 MTR_6g463630 36.842 95 58 1 243 335 206 300 6.86e-11 63.9
MsG0880042459.01.T01 MTR_5g075650 35.455 110 63 2 229 336 559 662 6.91e-11 63.9
MsG0880042459.01.T01 MTR_8g013620 33.333 120 72 4 221 335 434 550 7.11e-11 63.9
MsG0880042459.01.T01 MTR_4g091730 32.031 128 79 3 225 344 384 511 7.65e-11 63.9
MsG0880042459.01.T01 MTR_8g013620 33.333 120 72 4 221 335 434 550 8.21e-11 63.9
MsG0880042459.01.T01 MTR_7g094100 34.959 123 66 5 226 336 211 331 8.92e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042459.01.T01 AT1G51790 54.545 198 85 3 18 213 18 212 2.24e-58 202
MsG0880042459.01.T01 AT1G51790 31.159 138 83 3 218 344 494 630 3.22e-14 74.3
MsG0880042459.01.T01 AT1G51790 54.545 198 85 3 18 213 18 212 2.24e-58 202
MsG0880042459.01.T01 AT1G51790 31.159 138 83 3 218 344 494 630 3.22e-14 74.3
MsG0880042459.01.T01 AT1G51790 54.545 198 85 3 18 213 18 212 2.32e-58 203
MsG0880042459.01.T01 AT1G05700 45.188 239 116 5 14 241 16 250 5.30e-54 190
MsG0880042459.01.T01 AT1G05700 38.298 188 95 10 162 341 446 620 9.21e-18 85.1
MsG0880042459.01.T01 AT1G05700 45.188 239 116 5 14 241 16 250 7.57e-54 190
MsG0880042459.01.T01 AT1G05700 32.710 214 102 9 162 341 446 651 3.70e-15 77.0
MsG0880042459.01.T01 AT1G51890 43.922 255 117 5 5 235 1 253 1.24e-53 188
MsG0880042459.01.T01 AT1G51890 36.184 152 85 4 206 346 475 625 2.14e-19 89.7
MsG0880042459.01.T01 AT1G51890 43.922 255 117 5 5 235 1 253 4.02e-53 188
MsG0880042459.01.T01 AT1G51890 36.184 152 85 4 206 346 475 625 3.06e-19 89.7
MsG0880042459.01.T01 AT1G51800 47.783 203 101 3 7 208 7 205 4.26e-53 188
MsG0880042459.01.T01 AT1G51800 32.468 154 79 5 212 344 490 639 1.39e-16 81.6
MsG0880042459.01.T01 AT1G51890 43.922 255 117 5 5 235 1 253 4.65e-53 188
MsG0880042459.01.T01 AT1G51890 36.184 152 85 4 206 346 475 625 2.92e-19 89.7
MsG0880042459.01.T01 AT1G51910 53.107 177 79 3 20 194 20 194 9.56e-53 187
MsG0880042459.01.T01 AT1G51910 37.313 134 75 5 221 346 497 629 2.28e-16 80.9
MsG0880042459.01.T01 AT4G29990 45.070 213 109 4 5 213 4 212 2.70e-52 184
MsG0880042459.01.T01 AT4G29990 38.710 124 75 1 218 341 502 624 2.01e-20 92.8
MsG0880042459.01.T01 AT4G29990 45.070 213 109 4 5 213 4 212 4.57e-52 185
MsG0880042459.01.T01 AT4G29990 38.710 124 75 1 218 341 502 624 2.65e-20 92.8
MsG0880042459.01.T01 AT2G19210 45.500 200 102 3 18 213 20 216 5.06e-52 185
MsG0880042459.01.T01 AT2G19210 36.429 140 77 4 212 344 495 629 1.68e-19 90.5
MsG0880042459.01.T01 AT1G51880 50.273 183 89 2 7 187 25 207 7.61e-52 184
MsG0880042459.01.T01 AT1G51880 39.167 120 66 2 225 344 533 645 5.52e-19 89.0
MsG0880042459.01.T01 AT1G51880 50.273 183 89 2 7 187 7 189 8.50e-52 184
MsG0880042459.01.T01 AT1G51880 39.167 120 66 2 225 344 507 619 5.26e-19 89.0
MsG0880042459.01.T01 AT1G51880 50.273 183 89 2 7 187 25 207 8.53e-52 184
MsG0880042459.01.T01 AT1G51880 39.167 120 66 2 225 344 525 637 5.87e-19 88.6
MsG0880042459.01.T01 AT2G19230 46.296 216 105 4 2 213 7 215 9.62e-52 184
MsG0880042459.01.T01 AT2G19230 37.121 132 68 3 218 344 502 623 7.20e-22 97.4
MsG0880042459.01.T01 AT2G19230 46.296 216 105 4 2 213 7 215 1.38e-51 183
MsG0880042459.01.T01 AT2G19230 40.909 132 62 4 218 344 502 622 4.74e-22 97.8
MsG0880042459.01.T01 AT1G51860 46.860 207 98 4 5 199 4 210 2.93e-51 182
MsG0880042459.01.T01 AT1G51860 38.095 147 75 6 215 346 494 639 2.23e-18 87.0
MsG0880042459.01.T01 AT1G51870 45.872 218 112 5 5 217 4 220 5.46e-50 179
MsG0880042459.01.T01 AT1G51870 35.220 159 90 5 199 346 430 586 1.88e-18 87.0
MsG0880042459.01.T01 AT1G51870 45.872 218 112 5 5 217 4 220 8.34e-50 179
MsG0880042459.01.T01 AT1G51870 35.915 142 79 4 215 346 499 638 3.19e-18 86.7
MsG0880042459.01.T01 AT3G46330 45.854 205 101 5 7 206 8 207 5.39e-49 176
MsG0880042459.01.T01 AT3G46330 38.318 107 55 2 235 341 498 593 4.00e-15 77.0
MsG0880042459.01.T01 AT3G46330 45.854 205 101 5 7 206 8 207 5.48e-49 176
MsG0880042459.01.T01 AT3G46330 38.318 107 55 2 235 341 522 617 3.76e-15 77.0
MsG0880042459.01.T01 AT4G29450 45.146 206 106 2 14 212 12 217 1.82e-48 174
MsG0880042459.01.T01 AT4G29450 35.833 120 69 2 206 325 490 601 8.32e-12 67.0
MsG0880042459.01.T01 AT2G19190 45.960 198 100 3 20 213 21 215 1.01e-47 172
MsG0880042459.01.T01 AT2G19190 38.760 129 68 5 218 341 502 624 3.84e-16 80.1
MsG0880042459.01.T01 AT3G21340 46.193 197 100 4 18 211 22 215 1.12e-47 171
MsG0880042459.01.T01 AT3G21340 35.862 145 76 4 216 344 503 646 7.99e-17 82.0
MsG0880042459.01.T01 AT3G21340 46.193 197 100 4 18 211 22 215 3.30e-47 171
MsG0880042459.01.T01 AT3G21340 37.313 134 71 3 223 344 514 646 8.97e-17 82.0
MsG0880042459.01.T01 AT4G29180 45.226 199 102 2 10 201 9 207 3.68e-46 168
MsG0880042459.01.T01 AT4G29180 34.188 117 66 4 206 321 489 595 2.93e-12 68.2
MsG0880042459.01.T01 AT4G29180 45.226 199 102 2 10 201 9 207 4.14e-46 168
MsG0880042459.01.T01 AT4G29180 34.188 117 69 3 206 321 487 596 1.39e-11 66.2
MsG0880042459.01.T01 AT4G29180 45.226 199 102 2 10 201 9 207 4.86e-46 168
MsG0880042459.01.T01 AT4G29180 34.188 117 69 3 206 321 489 598 1.39e-11 66.2
MsG0880042459.01.T01 AT1G51840 45.128 195 97 5 6 198 11 197 1.62e-45 154
MsG0880042459.01.T01 AT1G51840 45.128 195 97 5 6 198 11 197 1.62e-45 154
MsG0880042459.01.T01 AT1G51840 45.128 195 97 5 6 198 11 197 1.62e-45 154
MsG0880042459.01.T01 AT1G51840 45.128 195 97 5 6 198 11 197 1.62e-45 154
MsG0880042459.01.T01 AT1G51840 45.128 195 97 5 6 198 11 197 1.62e-45 154
MsG0880042459.01.T01 AT3G46350 43.128 211 111 5 7 211 8 215 2.56e-45 160
MsG0880042459.01.T01 AT5G59650 46.857 175 90 2 13 184 13 187 1.11e-44 164
MsG0880042459.01.T01 AT5G59650 46.857 175 90 2 13 184 13 187 1.15e-44 164
MsG0880042459.01.T01 AT2G14510 42.347 196 106 3 7 198 15 207 1.91e-44 163
MsG0880042459.01.T01 AT2G14510 39.167 120 62 3 224 341 511 621 7.13e-18 85.5
MsG0880042459.01.T01 AT2G14510 42.347 196 106 3 7 198 7 199 1.95e-44 163
MsG0880042459.01.T01 AT2G14510 38.983 118 65 2 224 341 503 613 7.44e-18 85.5
MsG0880042459.01.T01 AT1G51850 46.277 188 86 5 15 197 12 189 4.78e-44 162
MsG0880042459.01.T01 AT1G51850 34.483 145 77 2 218 344 488 632 1.54e-19 90.5
MsG0880042459.01.T01 AT4G20450 40.179 224 116 6 5 212 7 228 2.92e-42 157
MsG0880042459.01.T01 AT4G20450 33.152 184 111 5 162 341 467 642 1.93e-17 84.0
MsG0880042459.01.T01 AT2G29000 45.251 179 94 4 7 184 8 183 2.92e-42 157
MsG0880042459.01.T01 AT2G29000 35.385 130 72 3 218 341 493 616 7.33e-16 79.3
MsG0880042459.01.T01 AT4G20450 40.179 224 116 6 5 212 7 228 2.98e-42 157
MsG0880042459.01.T01 AT4G20450 33.152 184 111 5 162 341 467 642 2.11e-17 84.0
MsG0880042459.01.T01 AT2G28990 41.148 209 117 4 5 211 3 207 7.78e-42 155
MsG0880042459.01.T01 AT2G28990 48.684 76 39 0 266 341 553 628 1.78e-13 72.0
MsG0880042459.01.T01 AT2G28990 41.148 209 117 4 5 211 3 207 7.78e-42 155
MsG0880042459.01.T01 AT2G28990 48.684 76 39 0 266 341 553 628 1.78e-13 72.0
MsG0880042459.01.T01 AT2G28960 45.604 182 93 3 6 184 7 185 9.10e-42 155
MsG0880042459.01.T01 AT2G28960 47.222 72 38 0 270 341 553 624 2.80e-14 74.7
MsG0880042459.01.T01 AT1G07560 46.524 187 85 4 21 200 22 200 1.05e-41 155
MsG0880042459.01.T01 AT1G07560 37.008 127 73 3 218 341 499 621 6.36e-20 91.7
MsG0880042459.01.T01 AT3G46400 44.335 203 92 7 6 195 6 200 2.97e-41 154
MsG0880042459.01.T01 AT3G46400 37.063 143 81 3 206 341 487 627 1.22e-17 84.7
MsG0880042459.01.T01 AT1G51820 45.745 188 90 5 20 205 17 194 4.45e-41 153
MsG0880042459.01.T01 AT1G51820 37.671 146 71 3 218 344 488 632 9.09e-18 85.1
MsG0880042459.01.T01 AT1G07550 42.408 191 99 4 13 198 13 197 1.04e-40 152
MsG0880042459.01.T01 AT1G07550 40.594 101 53 2 244 344 520 613 1.72e-15 78.2
MsG0880042459.01.T01 AT5G16900 44.633 177 93 3 23 197 18 191 1.05e-40 151
MsG0880042459.01.T01 AT5G16900 38.889 126 74 1 216 341 502 624 1.66e-18 87.0
MsG0880042459.01.T01 AT5G59670 43.077 195 105 4 20 211 19 210 1.10e-40 152
MsG0880042459.01.T01 AT5G59670 40.860 93 49 1 255 341 523 615 9.66e-14 72.8
MsG0880042459.01.T01 AT5G59670 43.077 195 105 4 20 211 19 210 1.10e-40 152
MsG0880042459.01.T01 AT5G59670 40.860 93 49 1 255 341 523 615 9.66e-14 72.8
MsG0880042459.01.T01 AT5G16900 44.633 177 93 3 23 197 18 191 1.66e-40 152
MsG0880042459.01.T01 AT5G16900 38.889 126 74 1 216 341 502 624 1.98e-18 87.0
MsG0880042459.01.T01 AT5G16900 44.633 177 93 3 23 197 18 191 1.66e-40 152
MsG0880042459.01.T01 AT5G16900 38.889 126 74 1 216 341 502 624 1.98e-18 87.0
MsG0880042459.01.T01 AT1G49100 41.589 214 120 4 8 217 9 221 3.46e-40 151
MsG0880042459.01.T01 AT1G49100 30.597 134 88 2 216 344 502 635 3.70e-15 77.0
MsG0880042459.01.T01 AT3G46420 44.751 181 97 3 7 184 7 187 9.59e-40 149
MsG0880042459.01.T01 AT3G46420 52.542 59 28 0 283 341 524 582 1.52e-11 66.2
MsG0880042459.01.T01 AT2G04300 42.157 204 100 6 6 197 4 201 1.29e-39 149
MsG0880042459.01.T01 AT2G04300 43.750 96 54 0 249 344 500 595 2.08e-20 93.2
MsG0880042459.01.T01 AT1G51805 44.262 183 91 5 18 197 15 189 1.39e-39 149
MsG0880042459.01.T01 AT1G51805 39.355 155 78 4 206 344 477 631 7.69e-20 91.3
MsG0880042459.01.T01 AT2G04300 42.157 204 100 6 6 197 4 201 1.78e-39 149
MsG0880042459.01.T01 AT2G04300 43.750 96 54 0 249 344 541 636 2.43e-20 92.8
MsG0880042459.01.T01 AT5G59680 43.017 179 96 3 22 197 22 197 3.62e-39 148
MsG0880042459.01.T01 AT2G14440 44.022 184 95 4 20 198 20 200 2.22e-38 145
MsG0880042459.01.T01 AT2G14440 39.167 120 62 3 224 341 504 614 6.73e-18 85.5
MsG0880042459.01.T01 AT1G51805 44.643 168 85 4 18 182 15 177 1.06e-37 144
MsG0880042459.01.T01 AT1G51805 38.710 155 79 4 206 344 453 607 7.89e-20 91.3
MsG0880042459.01.T01 AT3G46340 43.216 199 101 5 9 198 6 201 1.59e-37 143
MsG0880042459.01.T01 AT3G46340 46.154 78 41 1 265 341 560 637 3.65e-13 71.2
MsG0880042459.01.T01 AT1G51850 42.021 188 74 5 15 197 12 169 2.15e-37 143
MsG0880042459.01.T01 AT1G51850 34.483 145 77 2 218 344 468 612 1.47e-19 90.5
MsG0880042459.01.T01 AT3G46270 33.333 231 134 10 10 230 16 236 2.96e-24 103
MsG0880042459.01.T01 AT3G46270 32.900 231 135 10 10 230 8 228 2.98e-24 103
MsG0880042459.01.T01 AT1G67720 30.808 198 126 5 8 202 8 197 9.98e-23 100
MsG0880042459.01.T01 AT3G46370 41.071 112 63 2 87 195 1 112 5.93e-21 94.7
MsG0880042459.01.T01 AT3G46370 44.565 92 50 1 250 341 448 538 1.30e-17 84.7
MsG0880042459.01.T01 AT3G46370 41.071 112 63 2 87 195 1 112 5.93e-21 94.7
MsG0880042459.01.T01 AT3G46370 44.565 92 50 1 250 341 448 538 1.30e-17 84.7
MsG0880042459.01.T01 AT2G37050 29.858 211 139 6 28 234 27 232 1.69e-20 93.2
MsG0880042459.01.T01 AT2G37050 29.858 211 139 6 28 234 27 232 1.72e-20 93.2
MsG0880042459.01.T01 AT2G37050 30.332 211 138 6 28 234 27 232 2.34e-20 92.8
MsG0880042459.01.T01 AT2G37050 30.332 211 138 6 28 234 27 232 2.41e-20 92.8
MsG0880042459.01.T01 AT1G51890 53.191 94 42 2 5 96 1 94 5.84e-20 91.7
MsG0880042459.01.T01 AT1G51890 36.184 152 85 4 206 346 411 561 2.83e-19 89.7
MsG0880042459.01.T01 AT1G51890 36.184 152 85 4 206 346 203 353 2.29e-19 89.7
MsG0880042459.01.T01 AT1G51830 34.884 129 76 2 224 344 319 447 2.66e-19 89.7
MsG0880042459.01.T01 AT1G51830 34.884 129 76 2 224 344 312 440 2.87e-19 89.4
MsG0880042459.01.T01 AT1G51810 32.394 142 81 3 218 344 363 504 1.47e-18 87.4
MsG0880042459.01.T01 AT5G16900 38.889 126 74 1 216 341 316 438 1.85e-18 87.0
MsG0880042459.01.T01 AT1G51860 38.095 147 75 6 215 346 350 495 1.96e-18 87.0
MsG0880042459.01.T01 AT3G46280 35.000 160 91 6 30 182 25 178 2.97e-18 85.9
MsG0880042459.01.T01 AT3G46260 31.148 183 109 7 20 194 22 195 7.72e-18 84.7
MsG0880042459.01.T01 AT1G51820 37.671 146 71 3 218 344 226 370 1.19e-17 84.7
MsG0880042459.01.T01 AT5G59660 36.923 130 50 3 8 135 20 119 5.29e-16 79.7
MsG0880042459.01.T01 AT5G59660 37.600 125 71 3 218 335 434 558 1.54e-14 75.5
MsG0880042459.01.T01 AT5G59660 36.923 130 50 3 8 135 20 119 5.33e-16 79.7
MsG0880042459.01.T01 AT5G59660 37.600 125 71 3 218 335 431 555 1.48e-14 75.5
MsG0880042459.01.T01 AT1G24485 32.086 187 117 5 8 192 11 189 8.51e-16 78.6
MsG0880042459.01.T01 AT1G24485 32.086 187 117 5 8 192 11 189 9.36e-16 78.6
MsG0880042459.01.T01 AT1G24485 32.086 187 117 5 8 192 11 189 1.06e-15 78.2
MsG0880042459.01.T01 AT2G28970 35.971 139 77 2 218 344 395 533 1.10e-15 78.6
MsG0880042459.01.T01 AT2G28970 42.529 87 46 3 6 90 4 88 3.10e-12 68.2
MsG0880042459.01.T01 AT1G24485 32.086 187 117 5 8 192 11 189 1.10e-15 78.2
MsG0880042459.01.T01 AT2G28970 35.971 139 77 2 218 344 360 498 1.26e-15 78.6
MsG0880042459.01.T01 AT5G35370 29.082 196 113 5 165 335 366 560 5.59e-15 76.6
MsG0880042459.01.T01 AT3G46240 35.294 136 78 4 30 162 6 134 7.08e-15 75.9
MsG0880042459.01.T01 AT5G59660 37.600 125 71 3 218 335 409 533 1.35e-14 75.5
MsG0880042459.01.T01 AT5G59660 36.449 107 49 3 30 135 9 97 4.31e-13 70.9
MsG0880042459.01.T01 AT2G28960 47.222 72 38 0 270 341 421 492 2.28e-14 74.7
MsG0880042459.01.T01 AT3G19230 31.868 182 109 6 28 201 22 196 5.36e-14 73.2
MsG0880042459.01.T01 AT5G48740 31.646 158 99 7 28 182 20 171 6.32e-14 73.6
MsG0880042459.01.T01 AT5G48740 32.414 145 94 3 202 344 518 660 3.42e-11 65.1
MsG0880042459.01.T01 AT5G61350 24.390 369 182 15 62 346 226 581 3.02e-13 71.2
MsG0880042459.01.T01 AT1G61360 32.231 121 74 3 224 336 343 463 3.03e-13 71.2
MsG0880042459.01.T01 AT1G61360 32.231 121 74 3 224 336 343 463 3.03e-13 71.2
MsG0880042459.01.T01 AT1G61360 32.231 121 74 3 224 336 343 463 3.03e-13 71.2
MsG0880042459.01.T01 AT1G61360 32.231 121 74 3 224 336 424 544 3.68e-13 71.2
MsG0880042459.01.T01 AT1G61400 35.593 118 66 4 224 335 432 545 4.41e-13 70.9
MsG0880042459.01.T01 AT1G61400 35.593 118 66 4 224 335 432 545 4.56e-13 70.9
MsG0880042459.01.T01 AT1G61420 34.746 118 71 2 224 335 272 389 3.97e-12 67.8
MsG0880042459.01.T01 AT1G61490 35.593 118 66 3 224 335 396 509 4.72e-12 67.8
MsG0880042459.01.T01 AT1G61490 35.593 118 66 3 224 335 396 509 4.72e-12 67.8
MsG0880042459.01.T01 AT1G61490 35.593 118 66 3 224 335 272 385 4.87e-12 67.4
MsG0880042459.01.T01 AT1G61490 35.593 118 66 3 224 335 422 535 5.23e-12 67.4
MsG0880042459.01.T01 AT1G61490 35.593 118 66 3 224 335 422 535 5.23e-12 67.4
MsG0880042459.01.T01 AT1G61490 35.593 118 66 3 224 335 422 535 5.23e-12 67.4
MsG0880042459.01.T01 AT1G61490 35.593 118 66 3 224 335 422 535 5.23e-12 67.4
MsG0880042459.01.T01 AT2G43700 26.966 178 105 7 179 344 201 365 5.44e-12 67.4
MsG0880042459.01.T01 AT2G43700 26.966 178 105 7 179 344 201 365 5.44e-12 67.4
MsG0880042459.01.T01 AT2G43700 26.966 178 105 7 179 344 201 365 5.44e-12 67.4
MsG0880042459.01.T01 AT2G43700 26.966 178 105 7 179 344 201 365 5.44e-12 67.4
MsG0880042459.01.T01 AT1G61420 34.746 118 71 2 224 335 422 539 5.57e-12 67.4
MsG0880042459.01.T01 AT1G56145 29.524 210 115 7 130 335 552 732 5.87e-12 67.4
MsG0880042459.01.T01 AT4G39110 47.826 69 34 1 280 346 514 582 5.95e-12 67.4
MsG0880042459.01.T01 AT1G56145 29.524 210 115 7 130 335 449 629 6.35e-12 67.4
MsG0880042459.01.T01 AT1G56145 29.665 209 114 7 131 335 553 732 6.61e-12 67.4
MsG0880042459.01.T01 AT4G23320 39.130 115 64 3 224 335 138 249 6.75e-12 67.0
MsG0880042459.01.T01 AT4G23320 39.130 115 64 3 224 335 117 228 6.93e-12 67.0
MsG0880042459.01.T01 AT4G23320 39.130 115 64 3 224 335 117 228 6.93e-12 67.0
MsG0880042459.01.T01 AT1G61420 35.833 120 69 3 224 335 272 391 7.21e-12 67.0
MsG0880042459.01.T01 AT1G66910 38.393 112 54 3 233 335 284 389 7.49e-12 67.0
MsG0880042459.01.T01 AT1G66910 38.393 112 54 3 233 335 287 392 7.71e-12 67.0
MsG0880042459.01.T01 AT2G43700 26.966 178 105 7 179 344 225 389 8.09e-12 67.0
MsG0880042459.01.T01 AT1G61420 35.833 120 69 3 224 335 422 541 9.15e-12 66.6
MsG0880042459.01.T01 AT1G61420 35.833 120 69 3 224 335 422 541 9.15e-12 66.6
MsG0880042459.01.T01 AT1G06840 37.963 108 59 3 232 336 569 671 9.39e-12 66.6
MsG0880042459.01.T01 AT4G23190 39.091 110 57 3 228 335 294 395 1.10e-11 66.2
MsG0880042459.01.T01 AT2G21480 44.928 69 36 1 280 346 513 581 1.24e-11 66.2
MsG0880042459.01.T01 AT2G48010 37.288 118 59 4 232 336 214 329 1.30e-11 66.2
MsG0880042459.01.T01 AT4G23190 39.091 110 57 3 228 335 216 317 1.31e-11 66.2
MsG0880042459.01.T01 AT4G23190 39.091 110 57 3 228 335 216 317 1.31e-11 66.2
MsG0880042459.01.T01 AT4G23190 39.091 110 57 3 228 335 294 395 1.48e-11 65.9
MsG0880042459.01.T01 AT4G11470 37.500 96 55 2 242 335 292 384 2.13e-11 65.5
MsG0880042459.01.T01 AT4G23180 44.444 90 47 2 248 335 305 393 2.22e-11 65.5
MsG0880042459.01.T01 AT4G11470 37.500 96 55 2 242 335 297 389 2.43e-11 65.5
MsG0880042459.01.T01 AT4G23180 44.444 90 47 2 248 335 305 393 2.51e-11 65.1
MsG0880042459.01.T01 AT1G23540 47.368 76 38 1 273 346 352 427 2.59e-11 65.1
MsG0880042459.01.T01 AT4G23180 44.444 90 47 2 248 335 305 393 2.70e-11 65.1
MsG0880042459.01.T01 AT1G23540 47.368 76 38 1 273 346 352 427 2.81e-11 65.1
MsG0880042459.01.T01 AT1G61550 33.898 118 72 2 224 335 417 534 3.91e-11 64.7
MsG0880042459.01.T01 AT5G24080 33.036 112 69 1 224 335 343 448 4.31e-11 64.7
MsG0880042459.01.T01 AT5G24080 33.036 112 69 1 224 335 343 448 4.31e-11 64.7
MsG0880042459.01.T01 AT2G25220 30.000 130 71 3 226 335 13 142 4.42e-11 63.9
MsG0880042459.01.T01 AT1G61370 31.707 123 77 3 220 335 424 546 4.74e-11 64.7
MsG0880042459.01.T01 AT1G61370 31.707 123 77 3 220 335 273 395 4.86e-11 64.3
MsG0880042459.01.T01 AT5G24080 33.036 112 69 1 224 335 470 575 5.35e-11 64.3
MsG0880042459.01.T01 AT2G25220 30.000 130 71 3 226 335 62 191 5.55e-11 63.9
MsG0880042459.01.T01 AT1G11410 29.851 201 108 6 169 336 345 545 5.74e-11 64.3
MsG0880042459.01.T01 AT2G25220 30.000 130 71 3 226 335 13 142 5.76e-11 63.5
MsG0880042459.01.T01 AT4G30520 35.398 113 67 4 229 336 239 350 5.97e-11 64.3
MsG0880042459.01.T01 AT1G11410 29.851 201 108 6 169 336 254 454 6.34e-11 64.3
MsG0880042459.01.T01 AT1G11410 29.851 201 108 6 169 336 369 569 7.18e-11 63.9
MsG0880042459.01.T01 AT1G11410 29.851 201 108 6 169 336 376 576 7.40e-11 63.9
MsG0880042459.01.T01 AT3G05990 32.121 165 93 7 30 182 28 185 7.59e-11 63.5
MsG0880042459.01.T01 AT2G25220 30.000 130 71 3 226 335 62 191 7.70e-11 63.2
MsG0880042459.01.T01 AT1G61440 35.593 118 66 3 224 335 415 528 8.20e-11 63.9
MsG0880042459.01.T01 AT3G25560 33.898 118 72 4 224 336 243 359 8.46e-11 63.5
MsG0880042459.01.T01 AT2G25220 30.000 130 71 3 226 335 62 191 8.46e-11 63.2
MsG0880042459.01.T01 AT3G25560 33.898 118 72 4 224 336 243 359 9.01e-11 63.5
MsG0880042459.01.T01 AT3G25560 33.898 118 72 4 224 336 244 360 9.18e-11 63.5

Find 47 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACAATTTGATCTTCATTT+TGG 0.111609 8:+9135923 MsG0880042459.01.T01:CDS
TACACCACTGTCTATGAATT+TGG 0.169825 8:-9135732 None:intergenic
GATAACTTCAAAACTATTAT+TGG 0.177303 8:+9137992 MsG0880042459.01.T01:CDS
TGTACTTACTACTTTGGTTT+TGG 0.266771 8:+9135514 MsG0880042459.01.T01:CDS
ATTATTGGAGAAGGAGGATT+TGG 0.287014 8:+9138007 MsG0880042459.01.T01:CDS
GATTGTCATGCGTGATAAAT+TGG 0.302258 8:-9135975 None:intergenic
GCTTAACAGCGACTTGAGTT+TGG 0.365849 8:-9138057 None:intergenic
TACTTCTTTCGATTTGATAT+AGG 0.366048 8:+9136148 MsG0880042459.01.T01:CDS
TGTAGAACAGTATTGCTTGT+AGG 0.379830 8:-9135770 None:intergenic
CGCCTTCAAATTCTAAGAAA+AGG 0.389234 8:+9137912 MsG0880042459.01.T01:CDS
GCTTGGTGTACTTACTACTT+TGG 0.407419 8:+9135508 MsG0880042459.01.T01:CDS
GTACAAGCTCAGGATCAATC+AGG 0.461922 8:+9135536 MsG0880042459.01.T01:CDS
GGATTTGGAAAAGTTTACTT+TGG 0.476489 8:+9138022 MsG0880042459.01.T01:CDS
TTATAACCTTGCATCGATGA+TGG 0.490770 8:-9138088 None:intergenic
AAAATCCAAGAGAAATCAAA+AGG 0.491798 8:-9137556 None:intergenic
CCTGTATTCTAAGTTTGTGA+TGG 0.492833 8:-9136173 None:intergenic
TTGCAAGATTCCGTCATACA+AGG 0.492936 8:-9137479 None:intergenic
AACTCTATAGCTGAGATGAA+TGG 0.497045 8:-9136067 None:intergenic
TAGACAGTGGTGTAAGTAAG+AGG 0.501755 8:+9135741 MsG0880042459.01.T01:CDS
TTCAAAACTATTATTGGAGA+AGG 0.502648 8:+9137998 MsG0880042459.01.T01:CDS
AAAACTATTATTGGAGAAGG+AGG 0.505118 8:+9138001 MsG0880042459.01.T01:CDS
CAAAATGAAGATCAAATTGT+GGG 0.509056 8:-9135922 None:intergenic
CCATCACAAACTTAGAATAC+AGG 0.513044 8:+9136173 MsG0880042459.01.T01:CDS
TTTATCACGCATGACAATCA+AGG 0.534041 8:+9135979 MsG0880042459.01.T01:CDS
AGCTATTCTGAGACGAGCAC+AGG 0.540174 8:+9135689 MsG0880042459.01.T01:CDS
TGTCTTGTTAACACAGGCAA+AGG 0.553002 8:+9136040 MsG0880042459.01.T01:CDS
GTCTTGTTAACACAGGCAAA+GGG 0.563362 8:+9136041 MsG0880042459.01.T01:CDS
TTATAATGAATTTCAATCAG+AGG 0.570275 8:+9138105 MsG0880042459.01.T01:CDS
CCAAAATGAAGATCAAATTG+TGG 0.584899 8:-9135923 None:intergenic
AAACTCAAGTCGCTGTTAAG+CGG 0.587782 8:+9138059 MsG0880042459.01.T01:CDS
TTGCCTGTGTTAACAAGACA+TGG 0.589284 8:-9136037 None:intergenic
CTTTCACCATCATCGATGCA+AGG 0.609372 8:+9138082 MsG0880042459.01.T01:CDS
TAACCTTGGTCCTTGTATGA+CGG 0.610657 8:+9137469 MsG0880042459.01.T01:CDS
AAAATGAAGATCAAATTGTG+GGG 0.619321 8:-9135921 None:intergenic
GGTTGTATGTAATCTTGTGA+TGG 0.623386 8:-9136016 None:intergenic
GCTGAAAACGATGCAGCAAG+TGG 0.624937 8:-9137521 None:intergenic
TACAAAATAGATGTAACCAA+TGG 0.644074 8:+9135839 MsG0880042459.01.T01:CDS
AAATGAAGATCAAATTGTGG+GGG 0.648294 8:-9135920 None:intergenic
ACTGAAAGAAAATGCAAAGG+CGG 0.653607 8:-9135482 None:intergenic
GGATTCATTAGCATAGATTG+CGG 0.657236 8:+9135650 MsG0880042459.01.T01:intron
AATACTGAAAGAAAATGCAA+AGG 0.661353 8:-9135485 None:intergenic
CAACCATGTCTTGTTAACAC+AGG 0.665613 8:+9136034 MsG0880042459.01.T01:CDS
TACAGCAACTAGAATACGTG+AGG 0.668051 8:+9135789 MsG0880042459.01.T01:CDS
AGTGTGGATGATGATAACCT+TGG 0.685153 8:+9137455 MsG0880042459.01.T01:intron
ATTCCGTCATACAAGGACCA+AGG 0.691805 8:-9137472 None:intergenic
GATGCCAAATTCATAGACAG+TGG 0.699222 8:+9135728 MsG0880042459.01.T01:CDS
TACGTGAGGAGCTTTCCCAG+TGG 0.728840 8:+9135803 MsG0880042459.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGATGTAATATAATTA+AGG - Chr8:9136318-9136337 None:intergenic 10.0%
!! AAAAGATGTAATATAATTAA+GGG - Chr8:9136317-9136336 None:intergenic 10.0%
!!! AATTTGTTGATTTTTAATAT+TGG - Chr8:9136412-9136431 None:intergenic 10.0%
!! ATTCAAAAAAATTGTTCAAA+AGG - Chr8:9136565-9136584 None:intergenic 15.0%
!! CTTATTATTATTAACATAAC+AGG - Chr8:9137342-9137361 None:intergenic 15.0%
!!! AATAATAGTTTTGAAGTTAT+CGG - Chr8:9137993-9138012 None:intergenic 15.0%
!!! AGTTTTTAAATTTATGCATA+TGG - Chr8:9136764-9136783 None:intergenic 15.0%
!!! CATTTAAATTGTTTTCTTTA+GGG + Chr8:9136992-9137011 MsG0880042459.01.T01:intron 15.0%
!! AACAATGAAATTACATTTGA+TGG - Chr8:9137105-9137124 None:intergenic 20.0%
!! CATTTAACCAAATGATATTT+AGG - Chr8:9136905-9136924 None:intergenic 20.0%
!! GATAACTTCAAAACTATTAT+TGG + Chr8:9137992-9138011 MsG0880042459.01.T01:CDS 20.0%
!! TGAAATTATTCTCTCTTTAT+TGG + Chr8:9136948-9136967 MsG0880042459.01.T01:intron 20.0%
!! TGTAAAACAATGTTGATATT+AGG - Chr8:9137394-9137413 None:intergenic 20.0%
!! TTATAATGAATTTCAATCAG+AGG + Chr8:9138105-9138124 MsG0880042459.01.T01:CDS 20.0%
!! TTATCAAACAATAGCTTAAA+TGG + Chr8:9137017-9137036 MsG0880042459.01.T01:intron 20.0%
!! TTATGCATATGGTTTATTTA+AGG - Chr8:9136753-9136772 None:intergenic 20.0%
!!! ACTATATAGCTAAAGTTTTA+TGG - Chr8:9137867-9137886 None:intergenic 20.0%
!!! GATTAAATATTTTGTACCAT+TGG - Chr8:9135858-9135877 None:intergenic 20.0%
!!! GCATTTAAATTGTTTTCTTT+AGG + Chr8:9136991-9137010 MsG0880042459.01.T01:intron 20.0%
!!! TAATATAATTAAGGGTATGT+TGG - Chr8:9136309-9136328 None:intergenic 20.0%
! AAAACAATGTTGATATTAGG+AGG - Chr8:9137391-9137410 None:intergenic 25.0%
! AAAATCCAAGAGAAATCAAA+AGG - Chr8:9137559-9137578 None:intergenic 25.0%
! AAAATGAAGATCAAATTGTG+GGG - Chr8:9135924-9135943 None:intergenic 25.0%
! AATACTGAAAGAAAATGCAA+AGG - Chr8:9135488-9135507 None:intergenic 25.0%
! AATATGTTCCTATATATCTC+AGG + Chr8:9135629-9135648 MsG0880042459.01.T01:intron 25.0%
! ACTTACAAAGATGTAATTCT+TGG - Chr8:9136722-9136741 None:intergenic 25.0%
! AGAAGACAAAAAAGACAAAA+AGG + Chr8:9137587-9137606 MsG0880042459.01.T01:CDS 25.0%
! ATCAAGATGATCCTATATTT+GGG - Chr8:9136256-9136275 None:intergenic 25.0%
! ATTTGCAAATATAACTTCAG+AGG - Chr8:9136795-9136814 None:intergenic 25.0%
! CAAAATGAAGATCAAATTGT+GGG - Chr8:9135925-9135944 None:intergenic 25.0%
! CTATATTCATCCCTAAATAT+AGG - Chr8:9136486-9136505 None:intergenic 25.0%
! CTTACAAAGATGTAATTCTT+GGG - Chr8:9136721-9136740 None:intergenic 25.0%
! GTGTAAAGTAATGTGAAAAT+TGG + Chr8:9136531-9136550 MsG0880042459.01.T01:intron 25.0%
! TAATGAATCCTGAGATATAT+AGG - Chr8:9135640-9135659 None:intergenic 25.0%
! TACAAAATAGATGTAACCAA+TGG + Chr8:9135839-9135858 MsG0880042459.01.T01:CDS 25.0%
! TATCAAGATGATCCTATATT+TGG - Chr8:9136257-9136276 None:intergenic 25.0%
! TGTGATTAATACAACCTATA+AGG - Chr8:9137659-9137678 None:intergenic 25.0%
! TTCAAAACTATTATTGGAGA+AGG + Chr8:9137998-9138017 MsG0880042459.01.T01:CDS 25.0%
!! ATCAGAGCTTCTTTTTATTA+TGG + Chr8:9135875-9135894 MsG0880042459.01.T01:CDS 25.0%
!! TACTTCTTTCGATTTGATAT+AGG + Chr8:9136148-9136167 MsG0880042459.01.T01:CDS 25.0%
!!! ATAAACACTTTTTGTGTGTT+TGG - Chr8:9137682-9137701 None:intergenic 25.0%
!!! TTAATATAGCTTTGAGTATG+AGG - Chr8:9137267-9137286 None:intergenic 25.0%
!!! TTTTGATTTCTCTTGGATTT+TGG + Chr8:9137558-9137577 MsG0880042459.01.T01:CDS 25.0%
AAAACTATTATTGGAGAAGG+AGG + Chr8:9138001-9138020 MsG0880042459.01.T01:CDS 30.0%
AAATGAAGATCAAATTGTGG+GGG - Chr8:9135923-9135942 None:intergenic 30.0%
AAGAATTAGTATAGCAACAG+TGG - Chr8:9137743-9137762 None:intergenic 30.0%
ATCCACACTGAAAAAATCAA+AGG - Chr8:9137444-9137463 None:intergenic 30.0%
CCAAAATGAAGATCAAATTG+TGG - Chr8:9135926-9135945 None:intergenic 30.0%
GATAAACTAATTCTTTCTCC+TGG + Chr8:9136370-9136389 MsG0880042459.01.T01:intron 30.0%
GGATTTGGAAAAGTTTACTT+TGG + Chr8:9138022-9138041 MsG0880042459.01.T01:CDS 30.0%
GTGAGTTCCTAAATATCATT+TGG + Chr8:9136895-9136914 MsG0880042459.01.T01:intron 30.0%
TACTATCACAAACATCAAGA+AGG + Chr8:9136601-9136620 MsG0880042459.01.T01:intron 30.0%
TTATATTTGCAAATGCAACC+AGG + Chr8:9136801-9136820 MsG0880042459.01.T01:intron 30.0%
! AAAACGACAGATTTTCAATG+AGG + Chr8:9137304-9137323 MsG0880042459.01.T01:intron 30.0%
! CATTTTCTTTCAGTATTGCT+TGG + Chr8:9135491-9135510 MsG0880042459.01.T01:CDS 30.0%
! CCACAATTTGATCTTCATTT+TGG + Chr8:9135923-9135942 MsG0880042459.01.T01:CDS 30.0%
! CTCCTTTTCTTAGAATTTGA+AGG - Chr8:9137917-9137936 None:intergenic 30.0%
! TAACAATTTTTCACTCCACT+GGG - Chr8:9135821-9135840 None:intergenic 30.0%
! TAACATAGTGAGCTTTGATA+TGG - Chr8:9136867-9136886 None:intergenic 30.0%
! TAATTAAGGGTATGTTGGTA+AGG - Chr8:9136304-9136323 None:intergenic 30.0%
! TACATTTGATGGATCAACAT+GGG - Chr8:9137094-9137113 None:intergenic 30.0%
! TTACATTTGATGGATCAACA+TGG - Chr8:9137095-9137114 None:intergenic 30.0%
!! TGTACTTACTACTTTGGTTT+TGG + Chr8:9135514-9135533 MsG0880042459.01.T01:CDS 30.0%
!!! GTAATCCTTTTGATTTCTCT+TGG + Chr8:9137551-9137570 MsG0880042459.01.T01:CDS 30.0%
!!! TCAGAATAGCTCGATTTTTT+AGG - Chr8:9135680-9135699 None:intergenic 30.0%
!!! TCATTTTGGAGCTAATGTTT+GGG + Chr8:9135937-9135956 MsG0880042459.01.T01:CDS 30.0%
!!! TTCATTTTGGAGCTAATGTT+TGG + Chr8:9135936-9135955 MsG0880042459.01.T01:CDS 30.0%
AAACTAATTCTTTCTCCTGG+AGG + Chr8:9136373-9136392 MsG0880042459.01.T01:intron 35.0%
AACTCTATAGCTGAGATGAA+TGG - Chr8:9136070-9136089 None:intergenic 35.0%
AAGATGATCCTATATTTGGG+AGG - Chr8:9136253-9136272 None:intergenic 35.0%
AAGGTATGCATTCAAACCAA+TGG - Chr8:9137640-9137659 None:intergenic 35.0%
ACTGAAAGAAAATGCAAAGG+CGG - Chr8:9135485-9135504 None:intergenic 35.0%
ATTATTGGAGAAGGAGGATT+TGG + Chr8:9138007-9138026 MsG0880042459.01.T01:CDS 35.0%
CCATCACAAACTTAGAATAC+AGG + Chr8:9136173-9136192 MsG0880042459.01.T01:CDS 35.0%
CCTGTATTCTAAGTTTGTGA+TGG - Chr8:9136176-9136195 None:intergenic 35.0%
CTTCTTGAGAGATCAAAAAC+AGG + Chr8:9137222-9137241 MsG0880042459.01.T01:intron 35.0%
GATTGTCATGCGTGATAAAT+TGG - Chr8:9135978-9135997 None:intergenic 35.0%
GCATATTACCTCCCAAATAT+AGG + Chr8:9136242-9136261 MsG0880042459.01.T01:intron 35.0%
GGAGTAGTGTATTAATCCAT+TGG + Chr8:9137621-9137640 MsG0880042459.01.T01:intron 35.0%
GGATTCATTAGCATAGATTG+CGG + Chr8:9135650-9135669 MsG0880042459.01.T01:intron 35.0%
GGTTGTATGTAATCTTGTGA+TGG - Chr8:9136019-9136038 None:intergenic 35.0%
GGTTTGAATGCATACCTTAT+AGG + Chr8:9137642-9137661 MsG0880042459.01.T01:intron 35.0%
GTCATGTATTTGTCCTTTCA+TGG + Chr8:9137153-9137172 MsG0880042459.01.T01:intron 35.0%
TACACCACTGTCTATGAATT+TGG - Chr8:9135735-9135754 None:intergenic 35.0%
TGTAGAACAGTATTGCTTGT+AGG - Chr8:9135773-9135792 None:intergenic 35.0%
TTGCATCAGAAAATCAGGTA+TGG - Chr8:9137045-9137064 None:intergenic 35.0%
TTTATCACGCATGACAATCA+AGG + Chr8:9135979-9135998 MsG0880042459.01.T01:CDS 35.0%
! ATGGGACTTACAAGACTTTT+AGG - Chr8:9137076-9137095 None:intergenic 35.0%
! CGCCTTCAAATTCTAAGAAA+AGG + Chr8:9137912-9137931 MsG0880042459.01.T01:CDS 35.0%
! CTGATTTTCTGATGCAATTC+CGG + Chr8:9137048-9137067 MsG0880042459.01.T01:intron 35.0%
! GCAACAGTGGATTTAAATTG+CGG - Chr8:9137730-9137749 None:intergenic 35.0%
! GTAACAATTTTTCACTCCAC+TGG - Chr8:9135822-9135841 None:intergenic 35.0%
! TGGGACTTACAAGACTTTTA+GGG - Chr8:9137075-9137094 None:intergenic 35.0%
! TTATAACCTTGCATCGATGA+TGG - Chr8:9138091-9138110 None:intergenic 35.0%
!!! CACCTTTGATTTTTTCAGTG+TGG + Chr8:9137439-9137458 MsG0880042459.01.T01:intron 35.0%
AAACAGGTTCACTATCACTG+AGG + Chr8:9137238-9137257 MsG0880042459.01.T01:intron 40.0%
AAACATCAAGAAGGCCTATG+CGG + Chr8:9136610-9136629 MsG0880042459.01.T01:intron 40.0%
AAACTCAAGTCGCTGTTAAG+CGG + Chr8:9138059-9138078 MsG0880042459.01.T01:CDS 40.0%
ACCAGGAATTTGTCTTCAAG+TGG + Chr8:9136818-9136837 MsG0880042459.01.T01:intron 40.0%
AGTGTGGATGATGATAACCT+TGG + Chr8:9137455-9137474 MsG0880042459.01.T01:intron 40.0%
CGGAATTGCATCAGAAAATC+AGG - Chr8:9137050-9137069 None:intergenic 40.0%
CTTCCCACATGTAATTCACA+GGG - Chr8:9136667-9136686 None:intergenic 40.0%
GATGCCAAATTCATAGACAG+TGG + Chr8:9135728-9135747 MsG0880042459.01.T01:CDS 40.0%
GTGGATTTAAATTGCGGATG+TGG - Chr8:9137724-9137743 None:intergenic 40.0%
TAACCTTGGTCCTTGTATGA+CGG + Chr8:9137469-9137488 MsG0880042459.01.T01:CDS 40.0%
TACAGCAACTAGAATACGTG+AGG + Chr8:9135789-9135808 MsG0880042459.01.T01:CDS 40.0%
TAGACAGTGGTGTAAGTAAG+AGG + Chr8:9135741-9135760 MsG0880042459.01.T01:CDS 40.0%
TCAACGAGCGCCTATATTTA+GGG + Chr8:9136473-9136492 MsG0880042459.01.T01:intron 40.0%
TCCACTTGAAGACAAATTCC+TGG - Chr8:9136822-9136841 None:intergenic 40.0%
TGCCATCGATACTACAGTTT+AGG - Chr8:9136691-9136710 None:intergenic 40.0%
TTCCCACATGTAATTCACAG+GGG - Chr8:9136666-9136685 None:intergenic 40.0%
TTGCAAGATTCCGTCATACA+AGG - Chr8:9137482-9137501 None:intergenic 40.0%
TTGCCTGTGTTAACAAGACA+TGG - Chr8:9136040-9136059 None:intergenic 40.0%
! CAACCATGTCTTGTTAACAC+AGG + Chr8:9136034-9136053 MsG0880042459.01.T01:CDS 40.0%
! GTCTTGTTAACACAGGCAAA+GGG + Chr8:9136041-9136060 MsG0880042459.01.T01:CDS 40.0%
! TGTCTTGTTAACACAGGCAA+AGG + Chr8:9136040-9136059 MsG0880042459.01.T01:CDS 40.0%
!! ATGACTCTTAGTGTCACTTG+TGG + Chr8:9136509-9136528 MsG0880042459.01.T01:intron 40.0%
!! CTTACAAGACTTTTAGGGAC+CGG - Chr8:9137070-9137089 None:intergenic 40.0%
!! GACAAAAAGGTACTTCTCAG+AGG + Chr8:9137600-9137619 MsG0880042459.01.T01:intron 40.0%
!! GCTTGGTGTACTTACTACTT+TGG + Chr8:9135508-9135527 MsG0880042459.01.T01:CDS 40.0%
!! TTGTCTTCAAGTGGATTGAC+AGG + Chr8:9136827-9136846 MsG0880042459.01.T01:intron 40.0%
!!! TTTGGTTTTGGTACAAGCTC+AGG + Chr8:9135526-9135545 MsG0880042459.01.T01:CDS 40.0%
ATTCCGTCATACAAGGACCA+AGG - Chr8:9137475-9137494 None:intergenic 45.0%
CACTTGGAACTAACCCTGTA+AGG - Chr8:9137200-9137219 None:intergenic 45.0%
CCTGTGAATTACATGTGGGA+AGG + Chr8:9136665-9136684 MsG0880042459.01.T01:intron 45.0%
CCTTCCCACATGTAATTCAC+AGG - Chr8:9136668-9136687 None:intergenic 45.0%
CTCAACGAGCGCCTATATTT+AGG + Chr8:9136472-9136491 MsG0880042459.01.T01:intron 45.0%
CTTTCACCATCATCGATGCA+AGG + Chr8:9138082-9138101 MsG0880042459.01.T01:CDS 45.0%
GATCTCTCAAGAAGTCCACT+TGG - Chr8:9137216-9137235 None:intergenic 45.0%
GCTTAACAGCGACTTGAGTT+TGG - Chr8:9138060-9138079 None:intergenic 45.0%
GGTTTAGAAGTTTAGCCTCC+AGG - Chr8:9136391-9136410 None:intergenic 45.0%
GTACAAGCTCAGGATCAATC+AGG + Chr8:9135536-9135555 MsG0880042459.01.T01:CDS 45.0%
TCCTTTCATGGCAGAAACCT+GGG + Chr8:9137165-9137184 MsG0880042459.01.T01:intron 45.0%
TGCCCCTGTGAATTACATGT+GGG + Chr8:9136661-9136680 MsG0880042459.01.T01:intron 45.0%
TGGGGAAGAACAACCTTACA+GGG + Chr8:9137184-9137203 MsG0880042459.01.T01:intron 45.0%
! ATGTAATTCACAGGGGCACA+TGG - Chr8:9136659-9136678 None:intergenic 45.0%
! GGCCTAAACTGTAGTATCGA+TGG + Chr8:9136686-9136705 MsG0880042459.01.T01:intron 45.0%
!! CTTACAGGGTTAGTTCCAAG+TGG + Chr8:9137198-9137217 MsG0880042459.01.T01:intron 45.0%
CCTATGCGGTGGCTAGAAAT+TGG + Chr8:9136624-9136643 MsG0880042459.01.T01:intron 50.0%
CCTTTCATGGCAGAAACCTG+GGG + Chr8:9137166-9137185 MsG0880042459.01.T01:intron 50.0%
CTGGGGAAGAACAACCTTAC+AGG + Chr8:9137183-9137202 MsG0880042459.01.T01:intron 50.0%
CTGTAAGGTTGTTCTTCCCC+AGG - Chr8:9137185-9137204 None:intergenic 50.0%
GCGCTCGTTGAGTAAATCAC+GGG - Chr8:9136464-9136483 None:intergenic 50.0%
GCTGAAAACGATGCAGCAAG+TGG - Chr8:9137524-9137543 None:intergenic 50.0%
GGCGCTCGTTGAGTAAATCA+CGG - Chr8:9136465-9136484 None:intergenic 50.0%
GTCCTTTCATGGCAGAAACC+TGG + Chr8:9137164-9137183 MsG0880042459.01.T01:intron 50.0%
GTGCCCCTGTGAATTACATG+TGG + Chr8:9136660-9136679 MsG0880042459.01.T01:intron 50.0%
TTGCGGATGTGGACGCAATA+TGG - Chr8:9137713-9137732 None:intergenic 50.0%
!! AGCTATTCTGAGACGAGCAC+AGG + Chr8:9135689-9135708 MsG0880042459.01.T01:CDS 50.0%
!! CCAATTTCTAGCCACCGCAT+AGG - Chr8:9136627-9136646 None:intergenic 50.0%
CATCAAGAAGGCCTATGCGG+TGG + Chr8:9136613-9136632 MsG0880042459.01.T01:intron 55.0%
CCCCAGGTTTCTGCCATGAA+AGG - Chr8:9137169-9137188 None:intergenic 55.0%
GCGGTGGCTAGAAATTGGCA+AGG + Chr8:9136629-9136648 MsG0880042459.01.T01:intron 55.0%
TACGTGAGGAGCTTTCCCAG+TGG + Chr8:9135803-9135822 MsG0880042459.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr8 gene 9135476 9138165 9135476 ID=MsG0880042459.01;Name=MsG0880042459.01
Chr8 mRNA 9135476 9138165 9135476 ID=MsG0880042459.01.T01;Parent=MsG0880042459.01;Name=MsG0880042459.01.T01;_AED=0.49;_eAED=0.50;_QI=0|0|0|1|1|1|4|0|346
Chr8 exon 9135476 9135557 9135476 ID=MsG0880042459.01.T01:exon:3840;Parent=MsG0880042459.01.T01
Chr8 exon 9135651 9136194 9135651 ID=MsG0880042459.01.T01:exon:3841;Parent=MsG0880042459.01.T01
Chr8 exon 9137457 9137608 9137457 ID=MsG0880042459.01.T01:exon:3842;Parent=MsG0880042459.01.T01
Chr8 exon 9137903 9138165 9137903 ID=MsG0880042459.01.T01:exon:3843;Parent=MsG0880042459.01.T01
Chr8 CDS 9135476 9135557 9135476 ID=MsG0880042459.01.T01:cds;Parent=MsG0880042459.01.T01
Chr8 CDS 9135651 9136194 9135651 ID=MsG0880042459.01.T01:cds;Parent=MsG0880042459.01.T01
Chr8 CDS 9137457 9137608 9137457 ID=MsG0880042459.01.T01:cds;Parent=MsG0880042459.01.T01
Chr8 CDS 9137903 9138165 9137903 ID=MsG0880042459.01.T01:cds;Parent=MsG0880042459.01.T01
Gene Sequence

>MsG0880042459.01.T01

ATGTTACCGCCTTTGCATTTTCTTTCAGTATTGCTTGGTGTACTTACTACTTTGGTTTTGGTACAAGCTCAGGATCAATCAGGATTCATTAGCATAGATTGCGGTCTACCTAAAAAATCGAGCTATTCTGAGACGAGCACAGGCATAAATTACATTTCAGATGCCAAATTCATAGACAGTGGTGTAAGTAAGAGGATACTACCTACAAGCAATACTGTTCTACAGCAACTAGAATACGTGAGGAGCTTTCCCAGTGGAGTGAAAAATTGTTACAAAATAGATGTAACCAATGGTACAAAATATTTAATCAGAGCTTCTTTTTATTATGGAAACTATGATGATTTAAATGATCCCCCACAATTTGATCTTCATTTTGGAGCTAATGTTTGGGATACAGTAAAGTTCACCAATTTATCACGCATGACAATCAAGGAGATCATATACACTCCATCACAAGATTACATACAACCATGTCTTGTTAACACAGGCAAAGGGACTCCATTCATCTCAGCTATAGAGTTGAGAACTTTGAACAATAATGCTTATGTCACATACGCAGCTAAATCATCAGTATTATCATACTTCTTTCGATTTGATATAGGTTCCATCACAAACTTAGAATACAGTGTGGATGATGATAACCTTGGTCCTTGTATGACGGAATCTTGCAAAAAGAAGAACATTGCTGTACCACTTGCTGCATCGTTTTCAGCATTAGTTGTAATCCTTTTGATTTCTCTTGGATTTTGGCTATTCAGAAGACAAAAAAGACAAAAAGCTGTAGTTACGCCTTCAAATTCTAAGAAAAGGAGTTCAATGAAATCAAAACATCAAAAATTCAGTTACACTGAAATTGTCAATATTACCGATAACTTCAAAACTATTATTGGAGAAGGAGGATTTGGAAAAGTTTACTTTGGCACTCTACAAGACCAAACTCAAGTCGCTGTTAAGCGGCTTTCACCATCATCGATGCAAGGTTATAATGAATTTCAATCAGAGGTTAGACACTGCATTGAAGTTAAAAAACAATATATTTAA
Protein sequence

>MsG0880042459.01.T01

MLPPLHFLSVLLGVLTTLVLVQAQDQSGFISIDCGLPKKSSYSETSTGINYISDAKFIDSGVSKRILPTSNTVLQQLEYVRSFPSGVKNCYKIDVTNGTKYLIRASFYYGNYDDLNDPPQFDLHFGANVWDTVKFTNLSRMTIKEIIYTPSQDYIQPCLVNTGKGTPFISAIELRTLNNNAYVTYAAKSSVLSYFFRFDIGSITNLEYSVDDDNLGPCMTESCKKKNIAVPLAASFSALVVILLISLGFWLFRRQKRQKAVVTPSNSKKRSSMKSKHQKFSYTEIVNITDNFKTIIGEGGFGKVYFGTLQDQTQVAVKRLSPSSMQGYNEFQSEVRHCIEVKKQYI*