Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042660.01.T01 | XP_003627209.1 | 93.169 | 688 | 43 | 2 | 1 | 688 | 1 | 684 | 0 | 1178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042660.01.T01 | G7LJ04 | 93.169 | 688 | 43 | 2 | 1 | 688 | 1 | 684 | 0.0 | 1178 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0480021859.01 | MsG0880042660.01 | 0.802625 | 5.133021e-49 | 2.526401e-46 |
| MsG0380016153.01 | MsG0880042660.01 | 0.836328 | 9.978513e-57 | 1.253544e-53 |
| MsG0780039440.01 | MsG0880042660.01 | 0.804863 | 1.760895e-49 | 9.180119e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042660.01.T01 | MTR_8g018800 | 93.169 | 688 | 43 | 2 | 1 | 688 | 1 | 684 | 0.0 | 1178 |
| MsG0880042660.01.T01 | MTR_2g099520 | 49.189 | 185 | 81 | 7 | 1 | 179 | 1 | 178 | 2.54e-45 | 169 |
| MsG0880042660.01.T01 | MTR_2g099520 | 44.444 | 234 | 86 | 9 | 462 | 680 | 272 | 476 | 7.19e-25 | 109 |
| MsG0880042660.01.T01 | MTR_2g040580 | 38.235 | 102 | 45 | 2 | 574 | 672 | 448 | 534 | 1.11e-12 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042660.01.T01 | AT1G72790 | 33.730 | 252 | 128 | 10 | 3 | 234 | 2 | 234 | 6.13e-26 | 113 |
| MsG0880042660.01.T01 | AT1G72790 | 42.339 | 248 | 87 | 6 | 464 | 682 | 322 | 542 | 1.71e-21 | 99.4 |
Find 197 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTTCCGGTGAAACTTTC+CGG | 0.225344 | 8:-12091434 | MsG0880042660.01.T01:CDS |
| TCCAATTTCTCGATCGCTTT+CGG | 0.234313 | 8:+12090733 | None:intergenic |
| GGGTTCAGGGTGATTATGTT+AGG | 0.237064 | 8:-12090270 | MsG0880042660.01.T01:CDS |
| CTCATATTCACTTCCCTTAT+CGG | 0.246031 | 8:-12091245 | MsG0880042660.01.T01:CDS |
| TATCACCAATGTCACCATTT+TGG | 0.250998 | 8:-12091995 | MsG0880042660.01.T01:CDS |
| AGTTACCGGCATGGAAGTTT+AGG | 0.255361 | 8:-12090291 | MsG0880042660.01.T01:CDS |
| ACCGAAAGCGATCGAGAAAT+TGG | 0.265342 | 8:-12090734 | MsG0880042660.01.T01:CDS |
| TGAGCTTTGGTATCAACATC+TGG | 0.276873 | 8:+12090085 | None:intergenic |
| GGTGGAGGTGGTGGCGGTGG+AGG | 0.290713 | 8:+12090319 | None:intergenic |
| GGCATGGAAGTTTAGGGTTC+AGG | 0.290885 | 8:-12090284 | MsG0880042660.01.T01:CDS |
| GAAAATTAGGAGTGCATCTA+TGG | 0.298924 | 8:-12090992 | MsG0880042660.01.T01:CDS |
| AGTGGAAACGGTTGAGAAAT+TGG | 0.313377 | 8:-12091085 | MsG0880042660.01.T01:CDS |
| CTGAATAAAGTTCTGAGCTT+TGG | 0.313952 | 8:+12090072 | None:intergenic |
| GGCGGTGGTGGTGGCGGAGG+TGG | 0.314623 | 8:+12090493 | None:intergenic |
| TTGAGGGAGAAGCAAGGAAT+TGG | 0.334142 | 8:-12090010 | MsG0880042660.01.T01:CDS |
| AAAATGTAACACCGCCGTTT+TGG | 0.344771 | 8:-12091386 | MsG0880042660.01.T01:CDS |
| GGAGGCGGTGGTGGTGGCGG+AGG | 0.350918 | 8:+12090490 | None:intergenic |
| TTCCTCTCCGGTGCCGGAAC+CGG | 0.352649 | 8:-12090938 | MsG0880042660.01.T01:CDS |
| AAAATCCATCGGTGTTTAAT+CGG | 0.354028 | 8:-12091614 | MsG0880042660.01.T01:CDS |
| ACCTCCACCGTTTAAGTTAC+CGG | 0.356670 | 8:-12090305 | MsG0880042660.01.T01:CDS |
| GTTACCGGCATGGAAGTTTA+GGG | 0.358234 | 8:-12090290 | MsG0880042660.01.T01:CDS |
| ACACTGAAACGCCACCGTTT+TGG | 0.362293 | 8:-12091647 | MsG0880042660.01.T01:CDS |
| AACGGTGGCGTTTCAGTGTC+AGG | 0.362426 | 8:+12091651 | None:intergenic |
| TTACTTCCGGTGAAGTTTCC+CGG | 0.362527 | 8:-12091179 | MsG0880042660.01.T01:CDS |
| ACATCTTCAGTTCGAGAATC+TGG | 0.363891 | 8:+12091135 | None:intergenic |
| CGGTGAGGAAGAAGAAAATT+AGG | 0.364112 | 8:-12091005 | MsG0880042660.01.T01:CDS |
| CTATTACTACATTGACTAAC+TGG | 0.365567 | 8:+12090187 | None:intergenic |
| GGTTCAGGGTGATTATGTTA+GGG | 0.367907 | 8:-12090269 | MsG0880042660.01.T01:CDS |
| TACCGATAACGAAAATTAAC+AGG | 0.373271 | 8:+12091498 | None:intergenic |
| CACAAGATGTTAAACACTCT+TGG | 0.377468 | 8:-12091809 | MsG0880042660.01.T01:CDS |
| TGTGGATTTAGCTCCTGTTC+TGG | 0.380597 | 8:+12090811 | None:intergenic |
| GGATCTCCGGCGGCCGGAGG+TGG | 0.382223 | 8:-12091568 | MsG0880042660.01.T01:CDS |
| GTTCTCTTCGCTGTCGTTTG+TGG | 0.383268 | 8:-12091765 | MsG0880042660.01.T01:CDS |
| TGCAGATTTAGCTCCGGTTC+CGG | 0.387797 | 8:+12090925 | None:intergenic |
| CTGGTTTCACCTCCGGTTGC+CGG | 0.390606 | 8:+12091415 | None:intergenic |
| CCACAATGAGTAAGAAGATT+AGG | 0.392537 | 8:+12091877 | None:intergenic |
| AGAGAATTCTAATTATAGAT+TGG | 0.393160 | 8:-12090389 | MsG0880042660.01.T01:CDS |
| TAGTTATGAGGATGAGGAAG+AGG | 0.394405 | 8:+12091901 | None:intergenic |
| TCTCCGGCGGCCGGAGGTGG+TGG | 0.395023 | 8:-12091565 | MsG0880042660.01.T01:CDS |
| CGGTGAAACTTTCCGGCAAC+CGG | 0.396942 | 8:-12091427 | MsG0880042660.01.T01:CDS |
| CACCGGGAAAAGGTTACTTC+CGG | 0.399269 | 8:-12091192 | MsG0880042660.01.T01:CDS |
| GTCCTCGTCATCGGTGGTTG+TGG | 0.402126 | 8:+12090793 | None:intergenic |
| AACGGTGGAGGTGGTGGCGG+TGG | 0.404884 | 8:+12090316 | None:intergenic |
| CTGATCGGTCTTCGTTTAAC+CGG | 0.406587 | 8:-12091353 | MsG0880042660.01.T01:CDS |
| ATGTCTTCTTCTTGTTCCAT+TGG | 0.407601 | 8:+12092017 | None:intergenic |
| TCCAGTCTAGAGTTCCGATA+AGG | 0.412836 | 8:+12091231 | None:intergenic |
| CCAGTCTAGAGTTCCGATAA+GGG | 0.417066 | 8:+12091232 | None:intergenic |
| GGTGGTGGCGGTGGAGGGAT+AGG | 0.417407 | 8:+12090325 | None:intergenic |
| GAGACGGTGGTGGTTGGTGG+TGG | 0.420974 | 8:+12091962 | None:intergenic |
| TCCACAACTTCATCTGAATC+TGG | 0.423170 | 8:+12090214 | None:intergenic |
| GAGAAGCGGTGGATCGTATC+CGG | 0.425174 | 8:-12091589 | MsG0880042660.01.T01:CDS |
| AACTTAAACGGTGGAGGTGG+TGG | 0.425534 | 8:+12090310 | None:intergenic |
| CACCGGGGAACGGTTACTTC+CGG | 0.427114 | 8:-12091447 | MsG0880042660.01.T01:CDS |
| GGATCTCCGGCGACCGGATG+TGG | 0.427610 | 8:-12091307 | MsG0880042660.01.T01:CDS |
| ACCTCCGGCCGCCGGAGATC+CGG | 0.428139 | 8:+12091570 | None:intergenic |
| TTCCATGCCGGTAACTTAAA+CGG | 0.441773 | 8:+12090298 | None:intergenic |
| GAAATGAAAGAGTATATAGT+AGG | 0.441820 | 8:+12091852 | None:intergenic |
| TCAGGTACTGGTTTCACCTC+CGG | 0.442505 | 8:+12091408 | None:intergenic |
| TTCCTCGCCAGTGCCAGAAC+AGG | 0.443204 | 8:-12090824 | MsG0880042660.01.T01:CDS |
| CAGCGAAGAGAACTAGTATA+AGG | 0.447056 | 8:+12091775 | None:intergenic |
| ACGATCCTCTGCTTCTCAAC+CGG | 0.451057 | 8:+12091334 | None:intergenic |
| ACAAGATGTTAAACACTCTT+GGG | 0.456069 | 8:-12091808 | MsG0880042660.01.T01:CDS |
| GAGAAGCAGAGGATCGTATT+CGG | 0.462852 | 8:-12091328 | MsG0880042660.01.T01:CDS |
| GCGGAGACGGTGGTGGTTGG+TGG | 0.464944 | 8:+12091959 | None:intergenic |
| TCATCTTCAACTTCAAATCT+CGG | 0.465228 | 8:+12091474 | None:intergenic |
| GCATGGAAGTTTAGGGTTCA+GGG | 0.467716 | 8:-12090283 | MsG0880042660.01.T01:CDS |
| TTAGGATAGTTATGAGGATG+AGG | 0.469649 | 8:+12091895 | None:intergenic |
| TTTAGCTCCTGTTCTGGCAC+TGG | 0.470666 | 8:+12090817 | None:intergenic |
| CGGTGAAGTTTCCCGGCGAT+CGG | 0.473511 | 8:-12091172 | MsG0880042660.01.T01:CDS |
| TGGTTTCACCTCCGATCGCC+GGG | 0.476973 | 8:+12091161 | None:intergenic |
| TATGTTAGGGTTGATAGCAT+TGG | 0.477797 | 8:-12090256 | MsG0880042660.01.T01:CDS |
| TATGAGTATCATCATAAAAC+CGG | 0.477830 | 8:+12091262 | None:intergenic |
| GCTAAATCTGCATCGGCAAC+CGG | 0.480634 | 8:-12090914 | MsG0880042660.01.T01:CDS |
| AGATGAATTTCACCGGGAAA+AGG | 0.481806 | 8:-12091202 | MsG0880042660.01.T01:CDS |
| CTGGTTTCACCTCCGATCGC+CGG | 0.481944 | 8:+12091160 | None:intergenic |
| TGAGGGAGAAGCAAGGAATT+GGG | 0.482477 | 8:-12090009 | MsG0880042660.01.T01:CDS |
| TTGCTGACGGCGGCGATGAA+CGG | 0.484527 | 8:-12091542 | MsG0880042660.01.T01:CDS |
| CAAGAGTGTTTAACATCTTG+TGG | 0.484674 | 8:+12091810 | None:intergenic |
| CCGGTATCAGTTGAAGCCGC+GGG | 0.484915 | 8:+12091028 | None:intergenic |
| TTTAGCTCCGGTTCCGGCAC+CGG | 0.490647 | 8:+12090931 | None:intergenic |
| CCGTCAGCAACCACCACCTC+CGG | 0.491662 | 8:+12091555 | None:intergenic |
| CCTAATCTTCTTACTCATTG+TGG | 0.494334 | 8:-12091877 | MsG0880042660.01.T01:CDS |
| CCGGAGGTGGTGGTTGCTGA+CGG | 0.495127 | 8:-12091555 | MsG0880042660.01.T01:CDS |
| CCCGCGGCTTCAACTGATAC+CGG | 0.496273 | 8:-12091028 | MsG0880042660.01.T01:CDS |
| GTGGAGGTGGTGGCGGTGGA+GGG | 0.498886 | 8:+12090320 | None:intergenic |
| CAGGAGTATCATCATAAAAC+CGG | 0.499597 | 8:+12091517 | None:intergenic |
| GGAATTGGGAGGTCCAATCT+TGG | 0.501551 | 8:-12089995 | MsG0880042660.01.T01:CDS |
| TCAGTTCGAGAATCTGGCAC+TGG | 0.502185 | 8:+12091141 | None:intergenic |
| CAACCACCACCTCCGGCCGC+CGG | 0.511321 | 8:+12091562 | None:intergenic |
| ATTCCTCTTAAGAAGAAAAG+AGG | 0.512687 | 8:-12090634 | MsG0880042660.01.T01:CDS |
| ACACCTTTCGTCCTCGTCAT+CGG | 0.515060 | 8:+12090784 | None:intergenic |
| CGGTGGAGGGATAGGAATCA+AGG | 0.515398 | 8:+12090333 | None:intergenic |
| AGAAGATTAGGATAGTTATG+AGG | 0.516036 | 8:+12091889 | None:intergenic |
| GAAAAGAATGTGGTGATGAC+TGG | 0.517990 | 8:-12090367 | MsG0880042660.01.T01:CDS |
| GACGGTGCCACAGCGGTCAA+TGG | 0.521463 | 8:-12090674 | MsG0880042660.01.T01:CDS |
| AAGTTGAAGATGAATTTCAC+CGG | 0.522441 | 8:-12091464 | MsG0880042660.01.T01:CDS |
| TTAAACGGTGGAGGTGGTGG+CGG | 0.524247 | 8:+12090313 | None:intergenic |
| TTGGTATCAACATCTGGGCT+AGG | 0.528025 | 8:+12090091 | None:intergenic |
| TCTTCAACAACTACCACATC+CGG | 0.530241 | 8:+12091294 | None:intergenic |
| TTAGAATTCTCTCTTGCCAT+AGG | 0.533968 | 8:+12090400 | None:intergenic |
| GGCTAAGATGAATTCCTTGA+GGG | 0.534914 | 8:-12090026 | MsG0880042660.01.T01:CDS |
| AATTCCTTGCTTCTCCCTCA+AGG | 0.535611 | 8:+12090012 | None:intergenic |
| GAGGATCGTATTCGGATCTC+CGG | 0.537327 | 8:-12091320 | MsG0880042660.01.T01:CDS |
| CACCGGAAGTAACCGTTCCC+CGG | 0.538199 | 8:+12091445 | None:intergenic |
| ATGTACGGCGGAGACGGTGG+TGG | 0.539182 | 8:+12091952 | None:intergenic |
| AGAGGGTGGTGGTTGTTGTG+AGG | 0.540215 | 8:+12091919 | None:intergenic |
| AGTTATGAGGATGAGGAAGA+GGG | 0.540552 | 8:+12091902 | None:intergenic |
| CGATCGCCGGGAAACTTCAC+CGG | 0.542019 | 8:+12091173 | None:intergenic |
| TTGTTGAAGATGAACGGTAC+CGG | 0.544340 | 8:-12091281 | MsG0880042660.01.T01:CDS |
| TTGATAGCATTGGAAGTTCG+AGG | 0.546368 | 8:-12090246 | MsG0880042660.01.T01:CDS |
| TGAGGAGGAGTGAGTATGTA+CGG | 0.548670 | 8:+12091937 | None:intergenic |
| GAGCTTTGGTATCAACATCT+GGG | 0.551243 | 8:+12090086 | None:intergenic |
| GTGTTTAATCGGTTGAGAAG+CGG | 0.551624 | 8:-12091603 | MsG0880042660.01.T01:CDS |
| TCAATGGCGGAGAGAAAGAC+AGG | 0.552151 | 8:-12090658 | MsG0880042660.01.T01:CDS |
| CCCTTATCGGAACTCTAGAC+TGG | 0.552329 | 8:-12091232 | MsG0880042660.01.T01:CDS |
| ACGGCGGAGACGGTGGTGGT+TGG | 0.555249 | 8:+12091956 | None:intergenic |
| TCCGGATCTCCGGCGGCCGG+AGG | 0.556751 | 8:-12091571 | MsG0880042660.01.T01:CDS |
| GAGGATGAGGAAGAGGGTGG+TGG | 0.557023 | 8:+12091908 | None:intergenic |
| CATGCCGGTAACTTAAACGG+TGG | 0.557154 | 8:+12090301 | None:intergenic |
| GTGGATCGTATCCGGATCTC+CGG | 0.557717 | 8:-12091581 | MsG0880042660.01.T01:CDS |
| GGGTGGTGGTTGTTGTGAGG+AGG | 0.559012 | 8:+12091922 | None:intergenic |
| ACGGCGGCGATGAACGGTAC+CGG | 0.563940 | 8:-12091536 | MsG0880042660.01.T01:CDS |
| CGGTTGCCGGAAAGTTTCAC+CGG | 0.564146 | 8:+12091428 | None:intergenic |
| TGCCGATGCAGATTTAGCTC+CGG | 0.564542 | 8:+12090919 | None:intergenic |
| GTGAGTATGTACGGCGGAGA+CGG | 0.565133 | 8:+12091946 | None:intergenic |
| TGAAGTTTCCCGGCGATCGG+AGG | 0.565329 | 8:-12091169 | MsG0880042660.01.T01:CDS |
| TCGGATATATGAAGTGGAAA+CGG | 0.568181 | 8:-12091097 | MsG0880042660.01.T01:CDS |
| AAAGTGAAGATGAATTTCAC+CGG | 0.570338 | 8:-12091209 | MsG0880042660.01.T01:CDS |
| ACGAGGACGAAAGGTGTTCG+AGG | 0.571005 | 8:-12090778 | MsG0880042660.01.T01:CDS |
| ACCAGATTCAGATGAAGTTG+TGG | 0.571881 | 8:-12090215 | MsG0880042660.01.T01:CDS |
| GCCGGTATCAGTTGAAGCCG+CGG | 0.572155 | 8:+12091027 | None:intergenic |
| CCTTTCGTCCTCGTCATCGG+TGG | 0.573614 | 8:+12090787 | None:intergenic |
| GCCGGTAACTTAAACGGTGG+AGG | 0.573929 | 8:+12090304 | None:intergenic |
| TTTGGTATGATAATTCTGAT+CGG | 0.574483 | 8:-12091368 | MsG0880042660.01.T01:CDS |
| GGGAGCCAAAATGGTGACAT+TGG | 0.575902 | 8:+12091990 | None:intergenic |
| ATCCACAACCACCGATGACG+AGG | 0.577052 | 8:-12090795 | MsG0880042660.01.T01:CDS |
| CTCAACCGATTAAACACCGA+TGG | 0.577997 | 8:+12091609 | None:intergenic |
| GTATCCGGATCTCCGGCGGC+CGG | 0.580053 | 8:-12091574 | MsG0880042660.01.T01:CDS |
| CTCTCCGCCATTGACCGCTG+TGG | 0.581857 | 8:+12090667 | None:intergenic |
| CAACTACCACATCCGGTCGC+CGG | 0.582351 | 8:+12091301 | None:intergenic |
| AGATGAATTTCACCGGGGAA+CGG | 0.583028 | 8:-12091457 | MsG0880042660.01.T01:CDS |
| CCACCGATGACGAGGACGAA+AGG | 0.583667 | 8:-12090787 | MsG0880042660.01.T01:CDS |
| GACCGCTGTGGCACCGTCTG+TGG | 0.584037 | 8:+12090679 | None:intergenic |
| GGTAACTTAAACGGTGGAGG+TGG | 0.586189 | 8:+12090307 | None:intergenic |
| GTATGTTAATGAAAATCCAT+CGG | 0.587828 | 8:-12091625 | MsG0880042660.01.T01:CDS |
| GGTAATCAATGATTCTGTTG+CGG | 0.590854 | 8:-12091064 | MsG0880042660.01.T01:CDS |
| TTTAATCGGTTGAGAAGCGG+TGG | 0.592219 | 8:-12091600 | MsG0880042660.01.T01:CDS |
| AAATGAAAGAGTATATAGTA+GGG | 0.592381 | 8:+12091853 | None:intergenic |
| TGTGGATCGGATATATGAAG+TGG | 0.592416 | 8:-12091103 | MsG0880042660.01.T01:CDS |
| CACCGTTTAAGTTACCGGCA+TGG | 0.595177 | 8:-12090300 | MsG0880042660.01.T01:CDS |
| TTATAGATTGGAAAAGAATG+TGG | 0.595384 | 8:-12090377 | MsG0880042660.01.T01:CDS |
| CTCCGGTTCCGGCACCGGAG+AGG | 0.599813 | 8:+12090936 | None:intergenic |
| TCAGAATTATCATACCAAAA+CGG | 0.601763 | 8:+12091372 | None:intergenic |
| GTATTCGGATCTCCGGCGAC+CGG | 0.604491 | 8:-12091313 | MsG0880042660.01.T01:CDS |
| TTTAACCGGTTGAGAAGCAG+AGG | 0.604996 | 8:-12091339 | MsG0880042660.01.T01:CDS |
| TATGAGGATGAGGAAGAGGG+TGG | 0.607990 | 8:+12091905 | None:intergenic |
| TTCCTCTTAAGAAGAAAAGA+GGG | 0.608244 | 8:-12090633 | MsG0880042660.01.T01:CDS |
| AACCGGAGCTAAATCTGCAT+CGG | 0.611360 | 8:-12090921 | MsG0880042660.01.T01:CDS |
| AGCATTGGAAGTTCGAGGAG+TGG | 0.617418 | 8:-12090241 | MsG0880042660.01.T01:CDS |
| ATGTCGGAAGCAATGTGGAT+CGG | 0.620236 | 8:-12091116 | MsG0880042660.01.T01:CDS |
| TCTCTCTTGCCATAGGAACA+AGG | 0.620330 | 8:+12090407 | None:intergenic |
| AGTTGAAGATGAATTTCACC+GGG | 0.621577 | 8:-12091463 | MsG0880042660.01.T01:CDS |
| TGAAACTTTCCGGCAACCGG+AGG | 0.622094 | 8:-12091424 | MsG0880042660.01.T01:CDS |
| AATTCCTTGAGGGAGAAGCA+AGG | 0.625420 | 8:-12090016 | MsG0880042660.01.T01:CDS |
| GGTGCCACAGCGGTCAATGG+CGG | 0.625724 | 8:-12090671 | MsG0880042660.01.T01:CDS |
| GATTCTCGAACTGAAGATGT+CGG | 0.625936 | 8:-12091132 | MsG0880042660.01.T01:CDS |
| ATTTGAAGTAAACACGGCAG+CGG | 0.627033 | 8:-12090863 | MsG0880042660.01.T01:CDS |
| CGGTATCAGTTGAAGCCGCG+GGG | 0.627416 | 8:+12091029 | None:intergenic |
| AGTATGTACGGCGGAGACGG+TGG | 0.632871 | 8:+12091949 | None:intergenic |
| GGTTGTGAAACAAGTGGTGA+AGG | 0.636680 | 8:+12090514 | None:intergenic |
| TGGCTAAGATGAATTCCTTG+AGG | 0.640884 | 8:-12090027 | MsG0880042660.01.T01:CDS |
| CTCCTGTTCTGGCACTGGCG+AGG | 0.641120 | 8:+12090822 | None:intergenic |
| TGAACCCTAAACTTCCATGC+CGG | 0.644976 | 8:+12090286 | None:intergenic |
| GAGTGAATTTGAAGTAAACA+CGG | 0.649198 | 8:-12090869 | MsG0880042660.01.T01:CDS |
| TGCATCGGCAACCGGCTGTG+AGG | 0.650325 | 8:-12090906 | MsG0880042660.01.T01:CDS |
| GATCGTATCCGGATCTCCGG+CGG | 0.650359 | 8:-12091578 | MsG0880042660.01.T01:CDS |
| AAGTGAAGATGAATTTCACC+GGG | 0.652214 | 8:-12091208 | MsG0880042660.01.T01:CDS |
| TCTTGCCATAGGAACAAGGT+AGG | 0.655501 | 8:+12090411 | None:intergenic |
| TTCAACTGATACCGGCGGTG+AGG | 0.656341 | 8:-12091020 | MsG0880042660.01.T01:CDS |
| TCATTAACATACCAAAACGG+TGG | 0.657812 | 8:+12091636 | None:intergenic |
| CGTGGCAGCAGTGACTTCTG+CGG | 0.658836 | 8:-12090965 | MsG0880042660.01.T01:CDS |
| GGTGGAGGGATAGGAATCAA+GGG | 0.662964 | 8:+12090334 | None:intergenic |
| TGGTAGTTGTTGAAGATGAA+CGG | 0.664007 | 8:-12091287 | MsG0880042660.01.T01:CDS |
| TGAGAATTATCTACCACAGA+CGG | 0.667408 | 8:-12090692 | MsG0880042660.01.T01:CDS |
| TGAAGATGTCGGAAGCAATG+TGG | 0.669827 | 8:-12091121 | MsG0880042660.01.T01:CDS |
| GAGTGCATCTATGGAAAACG+TGG | 0.673615 | 8:-12090983 | MsG0880042660.01.T01:CDS |
| GGTATCAGTTGAAGCCGCGG+GGG | 0.694885 | 8:+12091030 | None:intergenic |
| GCGGCTTCAACTGATACCGG+CGG | 0.695750 | 8:-12091025 | MsG0880042660.01.T01:CDS |
| GGGAGAAGCAAGGAATTGGG+AGG | 0.700685 | 8:-12090006 | MsG0880042660.01.T01:CDS |
| TCTGGGCTAGGACAAAACAA+TGG | 0.702674 | 8:+12090103 | None:intergenic |
| GAGGTGGTGGTTGCTGACGG+CGG | 0.704238 | 8:-12091552 | MsG0880042660.01.T01:CDS |
| GAATTATCATACCAAAACGG+CGG | 0.732726 | 8:+12091375 | None:intergenic |
| GGAGGTGGTTGTGAAACAAG+TGG | 0.741981 | 8:+12090508 | None:intergenic |
| TACCACAGACGGTGCCACAG+CGG | 0.743286 | 8:-12090681 | MsG0880042660.01.T01:CDS |
| GGAGGAGTGAGTATGTACGG+CGG | 0.757317 | 8:+12091940 | None:intergenic |
| GTTGAAGATGAATTTCACCG+GGG | 0.787741 | 8:-12091462 | MsG0880042660.01.T01:CDS |
| TTATAACTATCAAAACGACG+CGG | 0.820679 | 8:+12091702 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATATAAGGATTTTGTAA+AGG | + | Chr8:12092016-12092035 | None:intergenic | 15.0% |
| !! | AGAGAATTCTAATTATAGAT+TGG | - | Chr8:12091595-12091614 | MsG0880042660.01.T01:CDS | 20.0% |
| !!! | AAATGAAAGAGTATATAGTA+GGG | + | Chr8:12090134-12090153 | None:intergenic | 20.0% |
| !!! | TCAAAATTTTCAACACTTTT+TGG | + | Chr8:12091431-12091450 | None:intergenic | 20.0% |
| !!! | TTTTCATTAACATACCAAAA+CGG | + | Chr8:12090354-12090373 | None:intergenic | 20.0% |
| ! | GTATGTTAATGAAAATCCAT+CGG | - | Chr8:12090359-12090378 | MsG0880042660.01.T01:CDS | 25.0% |
| ! | TATGAGTATCATCATAAAAC+CGG | + | Chr8:12090725-12090744 | None:intergenic | 25.0% |
| ! | TCAGAATTATCATACCAAAA+CGG | + | Chr8:12090615-12090634 | None:intergenic | 25.0% |
| ! | TTATAGATTGGAAAAGAATG+TGG | - | Chr8:12091607-12091626 | MsG0880042660.01.T01:CDS | 25.0% |
| ! | TTTGGTATGATAATTCTGAT+CGG | - | Chr8:12090616-12090635 | MsG0880042660.01.T01:CDS | 25.0% |
| !! | GAAATGAAAGAGTATATAGT+AGG | + | Chr8:12090135-12090154 | None:intergenic | 25.0% |
| !!! | GAGTTTTTAACTTCATTAAG+AGG | - | Chr8:12091386-12091405 | MsG0880042660.01.T01:CDS | 25.0% |
| !!! | TTATTCAGAATTTTAGAGCT+GGG | - | Chr8:12091927-12091946 | MsG0880042660.01.T01:CDS | 25.0% |
| !!! | TTTATTCAGAATTTTAGAGC+TGG | - | Chr8:12091926-12091945 | MsG0880042660.01.T01:CDS | 25.0% |
| !!! | TTTTTTGTGTTTGCTTTTGT+TGG | + | Chr8:12091552-12091571 | None:intergenic | 25.0% |
| AAAGTGAAGATGAATTTCAC+CGG | - | Chr8:12090775-12090794 | MsG0880042660.01.T01:CDS | 30.0% | |
| AAGTTGAAGATGAATTTCAC+CGG | - | Chr8:12090520-12090539 | MsG0880042660.01.T01:CDS | 30.0% | |
| ACAAGATGTTAAACACTCTT+GGG | - | Chr8:12090176-12090195 | MsG0880042660.01.T01:CDS | 30.0% | |
| AGAAGATTAGGATAGTTATG+AGG | + | Chr8:12090098-12090117 | None:intergenic | 30.0% | |
| ATTCCTCTTAAGAAGAAAAG+AGG | - | Chr8:12091350-12091369 | MsG0880042660.01.T01:CDS | 30.0% | |
| GAGAAAAATGCTACTGAAAT+TGG | - | Chr8:12091842-12091861 | MsG0880042660.01.T01:CDS | 30.0% | |
| TACCGATAACGAAAATTAAC+AGG | + | Chr8:12090489-12090508 | None:intergenic | 30.0% | |
| TCATCTTCAACTTCAAATCT+CGG | + | Chr8:12090513-12090532 | None:intergenic | 30.0% | |
| TTATAACTATCAAAACGACG+CGG | + | Chr8:12090285-12090304 | None:intergenic | 30.0% | |
| TTCCTCTTAAGAAGAAAAGA+GGG | - | Chr8:12091351-12091370 | MsG0880042660.01.T01:CDS | 30.0% | |
| ! | AAAATCCATCGGTGTTTAAT+CGG | - | Chr8:12090370-12090389 | MsG0880042660.01.T01:CDS | 30.0% |
| ! | ATTTTGTAAAGGACCAAGAT+TGG | + | Chr8:12092005-12092024 | None:intergenic | 30.0% |
| ! | CTATTACTACATTGACTAAC+TGG | + | Chr8:12091800-12091819 | None:intergenic | 30.0% |
| ! | CTCCTGTTAATTTTCGTTAT+CGG | - | Chr8:12090484-12090503 | MsG0880042660.01.T01:CDS | 30.0% |
| ! | GAGTGAATTTGAAGTAAACA+CGG | - | Chr8:12091115-12091134 | MsG0880042660.01.T01:CDS | 30.0% |
| ! | TGAAGGTTGAGAATTTTGAA+TGG | + | Chr8:12091456-12091475 | None:intergenic | 30.0% |
| AAAAACCTACCTTGTTCCTA+TGG | - | Chr8:12091568-12091587 | MsG0880042660.01.T01:CDS | 35.0% | |
| AAGTGAAGATGAATTTCACC+GGG | - | Chr8:12090776-12090795 | MsG0880042660.01.T01:CDS | 35.0% | |
| AGTTGAAGATGAATTTCACC+GGG | - | Chr8:12090521-12090540 | MsG0880042660.01.T01:CDS | 35.0% | |
| CACAAGATGTTAAACACTCT+TGG | - | Chr8:12090175-12090194 | MsG0880042660.01.T01:CDS | 35.0% | |
| CCACAATGAGTAAGAAGATT+AGG | + | Chr8:12090110-12090129 | None:intergenic | 35.0% | |
| CCTAATCTTCTTACTCATTG+TGG | - | Chr8:12090107-12090126 | MsG0880042660.01.T01:CDS | 35.0% | |
| CTCATATTCACTTCCCTTAT+CGG | - | Chr8:12090739-12090758 | MsG0880042660.01.T01:CDS | 35.0% | |
| GAATTATCATACCAAAACGG+CGG | + | Chr8:12090612-12090631 | None:intergenic | 35.0% | |
| GGTAATCAATGATTCTGTTG+CGG | - | Chr8:12090920-12090939 | MsG0880042660.01.T01:CDS | 35.0% | |
| TCATTAACATACCAAAACGG+TGG | + | Chr8:12090351-12090370 | None:intergenic | 35.0% | |
| TCGGATATATGAAGTGGAAA+CGG | - | Chr8:12090887-12090906 | MsG0880042660.01.T01:CDS | 35.0% | |
| TGAGAATTATCTACCACAGA+CGG | - | Chr8:12091292-12091311 | MsG0880042660.01.T01:CDS | 35.0% | |
| TGGTAGTTGTTGAAGATGAA+CGG | - | Chr8:12090697-12090716 | MsG0880042660.01.T01:CDS | 35.0% | |
| TTAGAATTCTCTCTTGCCAT+AGG | + | Chr8:12091587-12091606 | None:intergenic | 35.0% | |
| TTAGGATAGTTATGAGGATG+AGG | + | Chr8:12090092-12090111 | None:intergenic | 35.0% | |
| ! | GAAAATTAGGAGTGCATCTA+TGG | - | Chr8:12090992-12091011 | MsG0880042660.01.T01:CDS | 35.0% |
| ! | TATCACCAATGTCACCATTT+TGG | - | Chr8:12089989-12090008 | MsG0880042660.01.T01:CDS | 35.0% |
| ! | TTCCCTCTTTTCTTCTTAAG+AGG | + | Chr8:12091356-12091375 | None:intergenic | 35.0% |
| !! | CAAGAGTGTTTAACATCTTG+TGG | + | Chr8:12090177-12090196 | None:intergenic | 35.0% |
| !! | CAGGAGTATCATCATAAAAC+CGG | + | Chr8:12090470-12090489 | None:intergenic | 35.0% |
| !! | CTGAATAAAGTTCTGAGCTT+TGG | + | Chr8:12091915-12091934 | None:intergenic | 35.0% |
| !! | TATGTTAGGGTTGATAGCAT+TGG | - | Chr8:12091728-12091747 | MsG0880042660.01.T01:CDS | 35.0% |
| ACATCTTCAGTTCGAGAATC+TGG | + | Chr8:12090852-12090871 | None:intergenic | 40.0% | |
| ACCAGATTCAGATGAAGTTG+TGG | - | Chr8:12091769-12091788 | MsG0880042660.01.T01:CDS | 40.0% | |
| AGATGAATTTCACCGGGAAA+AGG | - | Chr8:12090782-12090801 | MsG0880042660.01.T01:CDS | 40.0% | |
| AGTGGAAACGGTTGAGAAAT+TGG | - | Chr8:12090899-12090918 | MsG0880042660.01.T01:CDS | 40.0% | |
| AGTTATGAGGATGAGGAAGA+GGG | + | Chr8:12090085-12090104 | None:intergenic | 40.0% | |
| CAGCGAAGAGAACTAGTATA+AGG | + | Chr8:12090212-12090231 | None:intergenic | 40.0% | |
| CGGTGAGGAAGAAGAAAATT+AGG | - | Chr8:12090979-12090998 | MsG0880042660.01.T01:CDS | 40.0% | |
| GATTCTCGAACTGAAGATGT+CGG | - | Chr8:12090852-12090871 | MsG0880042660.01.T01:CDS | 40.0% | |
| GGCTAAGATGAATTCCTTGA+GGG | - | Chr8:12091958-12091977 | MsG0880042660.01.T01:CDS | 40.0% | |
| GGTTCAGGGTGATTATGTTA+GGG | - | Chr8:12091715-12091734 | MsG0880042660.01.T01:CDS | 40.0% | |
| GTGTTTAATCGGTTGAGAAG+CGG | - | Chr8:12090381-12090400 | MsG0880042660.01.T01:CDS | 40.0% | |
| GTTGAAGATGAATTTCACCG+GGG | - | Chr8:12090522-12090541 | MsG0880042660.01.T01:CDS | 40.0% | |
| TAGTTATGAGGATGAGGAAG+AGG | + | Chr8:12090086-12090105 | None:intergenic | 40.0% | |
| TCCAATTTCTCGATCGCTTT+CGG | + | Chr8:12091254-12091273 | None:intergenic | 40.0% | |
| TCCACAACTTCATCTGAATC+TGG | + | Chr8:12091773-12091792 | None:intergenic | 40.0% | |
| TCTTCAACAACTACCACATC+CGG | + | Chr8:12090693-12090712 | None:intergenic | 40.0% | |
| TGGCTAAGATGAATTCCTTG+AGG | - | Chr8:12091957-12091976 | MsG0880042660.01.T01:CDS | 40.0% | |
| TGTGGATCGGATATATGAAG+TGG | - | Chr8:12090881-12090900 | MsG0880042660.01.T01:CDS | 40.0% | |
| TTACTTCCGGTGAAACTTTC+CGG | - | Chr8:12090550-12090569 | MsG0880042660.01.T01:CDS | 40.0% | |
| TTCCATGCCGGTAACTTAAA+CGG | + | Chr8:12091689-12091708 | None:intergenic | 40.0% | |
| TTGTTGAAGATGAACGGTAC+CGG | - | Chr8:12090703-12090722 | MsG0880042660.01.T01:CDS | 40.0% | |
| ! | AAAATGTAACACCGCCGTTT+TGG | - | Chr8:12090598-12090617 | MsG0880042660.01.T01:CDS | 40.0% |
| ! | ATTTGAAGTAAACACGGCAG+CGG | - | Chr8:12091121-12091140 | MsG0880042660.01.T01:CDS | 40.0% |
| ! | ATTTTCTTCTTCCTCACAGC+CGG | + | Chr8:12091092-12091111 | None:intergenic | 40.0% |
| ! | GAAAAGAATGTGGTGATGAC+TGG | - | Chr8:12091617-12091636 | MsG0880042660.01.T01:CDS | 40.0% |
| ! | GAGCTTTGGTATCAACATCT+GGG | + | Chr8:12091901-12091920 | None:intergenic | 40.0% |
| ! | TGAGCTTTGGTATCAACATC+TGG | + | Chr8:12091902-12091921 | None:intergenic | 40.0% |
| ! | TGCTTTTGTTGGAAGTGAAC+AGG | + | Chr8:12091541-12091560 | None:intergenic | 40.0% |
| ! | TTGATAGCATTGGAAGTTCG+AGG | - | Chr8:12091738-12091757 | MsG0880042660.01.T01:CDS | 40.0% |
| !!! | AGAATTTTAGAGCTGGGTTG+AGG | - | Chr8:12091933-12091952 | MsG0880042660.01.T01:CDS | 40.0% |
| !!! | GGTGTTACATTTTCAGGTAC+TGG | + | Chr8:12090591-12090610 | None:intergenic | 40.0% |
| AACCGGAGCTAAATCTGCAT+CGG | - | Chr8:12091063-12091082 | MsG0880042660.01.T01:CDS | 45.0% | |
| AATTCCTTGAGGGAGAAGCA+AGG | - | Chr8:12091968-12091987 | MsG0880042660.01.T01:CDS | 45.0% | |
| AATTCCTTGCTTCTCCCTCA+AGG | + | Chr8:12091975-12091994 | None:intergenic | 45.0% | |
| ACCGAAAGCGATCGAGAAAT+TGG | - | Chr8:12091250-12091269 | MsG0880042660.01.T01:CDS | 45.0% | |
| AGATGAATTTCACCGGGGAA+CGG | - | Chr8:12090527-12090546 | MsG0880042660.01.T01:CDS | 45.0% | |
| AGTTACCGGCATGGAAGTTT+AGG | - | Chr8:12091693-12091712 | MsG0880042660.01.T01:CDS | 45.0% | |
| ATGTCGGAAGCAATGTGGAT+CGG | - | Chr8:12090868-12090887 | MsG0880042660.01.T01:CDS | 45.0% | |
| CTCAACCGATTAAACACCGA+TGG | + | Chr8:12090378-12090397 | None:intergenic | 45.0% | |
| CTGATCGGTCTTCGTTTAAC+CGG | - | Chr8:12090631-12090650 | MsG0880042660.01.T01:CDS | 45.0% | |
| GAGAAGCAGAGGATCGTATT+CGG | - | Chr8:12090656-12090675 | MsG0880042660.01.T01:CDS | 45.0% | |
| GAGTGCATCTATGGAAAACG+TGG | - | Chr8:12091001-12091020 | MsG0880042660.01.T01:CDS | 45.0% | |
| GGGTTCAGGGTGATTATGTT+AGG | - | Chr8:12091714-12091733 | MsG0880042660.01.T01:CDS | 45.0% | |
| GGTTGTGAAACAAGTGGTGA+AGG | + | Chr8:12091473-12091492 | None:intergenic | 45.0% | |
| GTTACCGGCATGGAAGTTTA+GGG | - | Chr8:12091694-12091713 | MsG0880042660.01.T01:CDS | 45.0% | |
| TCTCTCTTGCCATAGGAACA+AGG | + | Chr8:12091580-12091599 | None:intergenic | 45.0% | |
| TCTTGCCATAGGAACAAGGT+AGG | + | Chr8:12091576-12091595 | None:intergenic | 45.0% | |
| TGAACCCTAAACTTCCATGC+CGG | + | Chr8:12091701-12091720 | None:intergenic | 45.0% | |
| TGAAGATGTCGGAAGCAATG+TGG | - | Chr8:12090863-12090882 | MsG0880042660.01.T01:CDS | 45.0% | |
| TGAGGAGGAGTGAGTATGTA+CGG | + | Chr8:12090050-12090069 | None:intergenic | 45.0% | |
| TGAGGGAGAAGCAAGGAATT+GGG | - | Chr8:12091975-12091994 | MsG0880042660.01.T01:CDS | 45.0% | |
| TTACTTCCGGTGAAGTTTCC+CGG | - | Chr8:12090805-12090824 | MsG0880042660.01.T01:CDS | 45.0% | |
| TTGAGGGAGAAGCAAGGAAT+TGG | - | Chr8:12091974-12091993 | MsG0880042660.01.T01:CDS | 45.0% | |
| TTGGTATCAACATCTGGGCT+AGG | + | Chr8:12091896-12091915 | None:intergenic | 45.0% | |
| TTTAACCGGTTGAGAAGCAG+AGG | - | Chr8:12090645-12090664 | MsG0880042660.01.T01:CDS | 45.0% | |
| TTTAATCGGTTGAGAAGCGG+TGG | - | Chr8:12090384-12090403 | MsG0880042660.01.T01:CDS | 45.0% | |
| ! | ACCTCCACCGTTTAAGTTAC+CGG | - | Chr8:12091679-12091698 | MsG0880042660.01.T01:CDS | 45.0% |
| ! | ATTTTCTTCTTCCTCACCGC+CGG | + | Chr8:12090978-12090997 | None:intergenic | 45.0% |
| ! | CCAGTCTAGAGTTCCGATAA+GGG | + | Chr8:12090755-12090774 | None:intergenic | 45.0% |
| ! | GCATGGAAGTTTAGGGTTCA+GGG | - | Chr8:12091701-12091720 | MsG0880042660.01.T01:CDS | 45.0% |
| ! | TCCAGTCTAGAGTTCCGATA+AGG | + | Chr8:12090756-12090775 | None:intergenic | 45.0% |
| ! | TCTGGGCTAGGACAAAACAA+TGG | + | Chr8:12091884-12091903 | None:intergenic | 45.0% |
| ! | TGTGGATTTAGCTCCTGTTC+TGG | + | Chr8:12091176-12091195 | None:intergenic | 45.0% |
| ! | TTCTGCGGAATTTTCCTCTC+CGG | - | Chr8:12091034-12091053 | MsG0880042660.01.T01:CDS | 45.0% |
| !! | GTGGTTTTTGGGAGCCAAAA+TGG | + | Chr8:12090006-12090025 | None:intergenic | 45.0% |
| !!! | AACGGCGGTGTTACATTTTC+AGG | + | Chr8:12090597-12090616 | None:intergenic | 45.0% |
| !!! | TTTTAGAGCTGGGTTGAGGA+TGG | - | Chr8:12091937-12091956 | MsG0880042660.01.T01:CDS | 45.0% |
| AACTTAAACGGTGGAGGTGG+TGG | + | Chr8:12091677-12091696 | None:intergenic | 50.0% | |
| ACACCTTTCGTCCTCGTCAT+CGG | + | Chr8:12091203-12091222 | None:intergenic | 50.0% | |
| ACGATCCTCTGCTTCTCAAC+CGG | + | Chr8:12090653-12090672 | None:intergenic | 50.0% | |
| AGGTTGTGAAAAACCGACGC+GGG | + | Chr8:12091521-12091540 | None:intergenic | 50.0% | |
| CACCGGGAAAAGGTTACTTC+CGG | - | Chr8:12090792-12090811 | MsG0880042660.01.T01:CDS | 50.0% | |
| CAGGTTGTGAAAAACCGACG+CGG | + | Chr8:12091522-12091541 | None:intergenic | 50.0% | |
| CATGCCGGTAACTTAAACGG+TGG | + | Chr8:12091686-12091705 | None:intergenic | 50.0% | |
| CCCTTATCGGAACTCTAGAC+TGG | - | Chr8:12090752-12090771 | MsG0880042660.01.T01:CDS | 50.0% | |
| GAGGATCGTATTCGGATCTC+CGG | - | Chr8:12090664-12090683 | MsG0880042660.01.T01:CDS | 50.0% | |
| GGAATTGGGAGGTCCAATCT+TGG | - | Chr8:12091989-12092008 | MsG0880042660.01.T01:CDS | 50.0% | |
| GGAGGTGGTTGTGAAACAAG+TGG | + | Chr8:12091479-12091498 | None:intergenic | 50.0% | |
| GGGAGCCAAAATGGTGACAT+TGG | + | Chr8:12089997-12090016 | None:intergenic | 50.0% | |
| GGTAACTTAAACGGTGGAGG+TGG | + | Chr8:12091680-12091699 | None:intergenic | 50.0% | |
| GGTGGAGGGATAGGAATCAA+GGG | + | Chr8:12091653-12091672 | None:intergenic | 50.0% | |
| TATGAGGATGAGGAAGAGGG+TGG | + | Chr8:12090082-12090101 | None:intergenic | 50.0% | |
| TCAGTTCGAGAATCTGGCAC+TGG | + | Chr8:12090846-12090865 | None:intergenic | 50.0% | |
| ! | ACACTGAAACGCCACCGTTT+TGG | - | Chr8:12090337-12090356 | MsG0880042660.01.T01:CDS | 50.0% |
| ! | AGCATTGGAAGTTCGAGGAG+TGG | - | Chr8:12091743-12091762 | MsG0880042660.01.T01:CDS | 50.0% |
| ! | CACCGGAAGTAACCTTTTCC+CGG | + | Chr8:12090797-12090816 | None:intergenic | 50.0% |
| ! | CACCGTTTAAGTTACCGGCA+TGG | - | Chr8:12091684-12091703 | MsG0880042660.01.T01:CDS | 50.0% |
| ! | GCTAAATCTGCATCGGCAAC+CGG | - | Chr8:12091070-12091089 | MsG0880042660.01.T01:CDS | 50.0% |
| ! | GGCATGGAAGTTTAGGGTTC+AGG | - | Chr8:12091700-12091719 | MsG0880042660.01.T01:CDS | 50.0% |
| ! | GTTCTCTTCGCTGTCGTTTG+TGG | - | Chr8:12090219-12090238 | MsG0880042660.01.T01:CDS | 50.0% |
| ! | TCAATGGCGGAGAGAAAGAC+AGG | - | Chr8:12091326-12091345 | MsG0880042660.01.T01:CDS | 50.0% |
| ! | TGCAGATTTAGCTCCGGTTC+CGG | + | Chr8:12091062-12091081 | None:intergenic | 50.0% |
| ! | TGCCGATGCAGATTTAGCTC+CGG | + | Chr8:12091068-12091087 | None:intergenic | 50.0% |
| ! | TTTAGCTCCTGTTCTGGCAC+TGG | + | Chr8:12091170-12091189 | None:intergenic | 50.0% |
| !! | TCAGGTACTGGTTTCACCTC+CGG | + | Chr8:12090579-12090598 | None:intergenic | 50.0% |
| !!! | GGTGGTTGGTGGTGGTTTTT+GGG | + | Chr8:12090017-12090036 | None:intergenic | 50.0% |
| !!! | TGGTGGTTGGTGGTGGTTTT+TGG | + | Chr8:12090018-12090037 | None:intergenic | 50.0% |
| AACGGTGGCGTTTCAGTGTC+AGG | + | Chr8:12090336-12090355 | None:intergenic | 55.0% | |
| ATCCACAACCACCGATGACG+AGG | - | Chr8:12091189-12091208 | MsG0880042660.01.T01:CDS | 55.0% | |
| CGGTGAAACTTTCCGGCAAC+CGG | - | Chr8:12090557-12090576 | MsG0880042660.01.T01:CDS | 55.0% | |
| CGGTGGAGGGATAGGAATCA+AGG | + | Chr8:12091654-12091673 | None:intergenic | 55.0% | |
| CGGTTGCCGGAAAGTTTCAC+CGG | + | Chr8:12090559-12090578 | None:intergenic | 55.0% | |
| GAGAAGCGGTGGATCGTATC+CGG | - | Chr8:12090395-12090414 | MsG0880042660.01.T01:CDS | 55.0% | |
| GCCGGTAACTTAAACGGTGG+AGG | + | Chr8:12091683-12091702 | None:intergenic | 55.0% | |
| GGAGGAGTGAGTATGTACGG+CGG | + | Chr8:12090047-12090066 | None:intergenic | 55.0% | |
| GGGAGAAGCAAGGAATTGGG+AGG | - | Chr8:12091978-12091997 | MsG0880042660.01.T01:CDS | 55.0% | |
| GGTTGTGAAAAACCGACGCG+GGG | + | Chr8:12091520-12091539 | None:intergenic | 55.0% | |
| GTGAGTATGTACGGCGGAGA+CGG | + | Chr8:12090041-12090060 | None:intergenic | 55.0% | |
| GTGGATCGTATCCGGATCTC+CGG | - | Chr8:12090403-12090422 | MsG0880042660.01.T01:CDS | 55.0% | |
| GTTGTGAAAAACCGACGCGG+GGG | + | Chr8:12091519-12091538 | None:intergenic | 55.0% | |
| TGAAACTTTCCGGCAACCGG+AGG | - | Chr8:12090560-12090579 | MsG0880042660.01.T01:CDS | 55.0% | |
| TTCAACTGATACCGGCGGTG+AGG | - | Chr8:12090964-12090983 | MsG0880042660.01.T01:CDS | 55.0% | |
| TTGTGAAAAACCGACGCGGG+GGG | + | Chr8:12091518-12091537 | None:intergenic | 55.0% | |
| ! | AGAGGGTGGTGGTTGTTGTG+AGG | + | Chr8:12090068-12090087 | None:intergenic | 55.0% |
| ! | GGAATTTTCCTCTCCGGTGC+CGG | - | Chr8:12091040-12091059 | MsG0880042660.01.T01:CDS | 55.0% |
| ! | TTAAACGGTGGAGGTGGTGG+CGG | + | Chr8:12091674-12091693 | None:intergenic | 55.0% |
| !! | ACGAGGACGAAAGGTGTTCG+AGG | - | Chr8:12091206-12091225 | MsG0880042660.01.T01:CDS | 55.0% |
| AGTATGTACGGCGGAGACGG+TGG | + | Chr8:12090038-12090057 | None:intergenic | 60.0% | |
| CAACTACCACATCCGGTCGC+CGG | + | Chr8:12090686-12090705 | None:intergenic | 60.0% | |
| CACCGGAAGTAACCGTTCCC+CGG | + | Chr8:12090542-12090561 | None:intergenic | 60.0% | |
| CACCGGGGAACGGTTACTTC+CGG | - | Chr8:12090537-12090556 | MsG0880042660.01.T01:CDS | 60.0% | |
| CCACCGATGACGAGGACGAA+AGG | - | Chr8:12091197-12091216 | MsG0880042660.01.T01:CDS | 60.0% | |
| CCCGCGGCTTCAACTGATAC+CGG | - | Chr8:12090956-12090975 | MsG0880042660.01.T01:CDS | 60.0% | |
| CCGGTATCAGTTGAAGCCGC+GGG | + | Chr8:12090959-12090978 | None:intergenic | 60.0% | |
| CCTTTCGTCCTCGTCATCGG+TGG | + | Chr8:12091200-12091219 | None:intergenic | 60.0% | |
| CGATCGCCGGGAAACTTCAC+CGG | + | Chr8:12090814-12090833 | None:intergenic | 60.0% | |
| CGGAGAATTCACAACCCCCG+CGG | - | Chr8:12090940-12090959 | MsG0880042660.01.T01:CDS | 60.0% | |
| CGGTATCAGTTGAAGCCGCG+GGG | + | Chr8:12090958-12090977 | None:intergenic | 60.0% | |
| CGGTGAAGTTTCCCGGCGAT+CGG | - | Chr8:12090812-12090831 | MsG0880042660.01.T01:CDS | 60.0% | |
| CGTGGCAGCAGTGACTTCTG+CGG | - | Chr8:12091019-12091038 | MsG0880042660.01.T01:CDS | 60.0% | |
| CTGGTTTCACCTCCGATCGC+CGG | + | Chr8:12090827-12090846 | None:intergenic | 60.0% | |
| CTGGTTTCACCTCCGGTTGC+CGG | + | Chr8:12090572-12090591 | None:intergenic | 60.0% | |
| GAGGATGAGGAAGAGGGTGG+TGG | + | Chr8:12090079-12090098 | None:intergenic | 60.0% | |
| GATCGTATCCGGATCTCCGG+CGG | - | Chr8:12090406-12090425 | MsG0880042660.01.T01:CDS | 60.0% | |
| GCCGGTATCAGTTGAAGCCG+CGG | + | Chr8:12090960-12090979 | None:intergenic | 60.0% | |
| GCGGCTTCAACTGATACCGG+CGG | - | Chr8:12090959-12090978 | MsG0880042660.01.T01:CDS | 60.0% | |
| GGTATCAGTTGAAGCCGCGG+GGG | + | Chr8:12090957-12090976 | None:intergenic | 60.0% | |
| GTATTCGGATCTCCGGCGAC+CGG | - | Chr8:12090671-12090690 | MsG0880042660.01.T01:CDS | 60.0% | |
| GTCCTCGTCATCGGTGGTTG+TGG | + | Chr8:12091194-12091213 | None:intergenic | 60.0% | |
| TGAAGTTTCCCGGCGATCGG+AGG | - | Chr8:12090815-12090834 | MsG0880042660.01.T01:CDS | 60.0% | |
| TGGTTTCACCTCCGATCGCC+GGG | + | Chr8:12090826-12090845 | None:intergenic | 60.0% | |
| TTCCTCGCCAGTGCCAGAAC+AGG | - | Chr8:12091160-12091179 | MsG0880042660.01.T01:CDS | 60.0% | |
| TTGCTGACGGCGGCGATGAA+CGG | - | Chr8:12090442-12090461 | MsG0880042660.01.T01:CDS | 60.0% | |
| ! | GGGTGGTGGTTGTTGTGAGG+AGG | + | Chr8:12090065-12090084 | None:intergenic | 60.0% |
| ! | TTTAGCTCCGGTTCCGGCAC+CGG | + | Chr8:12091056-12091075 | None:intergenic | 60.0% |
| !! | TACCACAGACGGTGCCACAG+CGG | - | Chr8:12091303-12091322 | MsG0880042660.01.T01:CDS | 60.0% |
| ACGGCGGCGATGAACGGTAC+CGG | - | Chr8:12090448-12090467 | MsG0880042660.01.T01:CDS | 65.0% | |
| ATGTACGGCGGAGACGGTGG+TGG | + | Chr8:12090035-12090054 | None:intergenic | 65.0% | |
| CCGTCAGCAACCACCACCTC+CGG | + | Chr8:12090432-12090451 | None:intergenic | 65.0% | |
| CTCTCCGCCATTGACCGCTG+TGG | + | Chr8:12091320-12091339 | None:intergenic | 65.0% | |
| TGAAAAACCGACGCGGGGGG+AGG | + | Chr8:12091515-12091534 | None:intergenic | 65.0% | |
| ! | CCGGAGGTGGTGGTTGCTGA+CGG | - | Chr8:12090429-12090448 | MsG0880042660.01.T01:CDS | 65.0% |
| ! | GAGGTGGTGGTTGCTGACGG+CGG | - | Chr8:12090432-12090451 | MsG0880042660.01.T01:CDS | 65.0% |
| ! | GGTGCCACAGCGGTCAATGG+CGG | - | Chr8:12091313-12091332 | MsG0880042660.01.T01:CDS | 65.0% |
| ! | TGCATCGGCAACCGGCTGTG+AGG | - | Chr8:12091078-12091097 | MsG0880042660.01.T01:CDS | 65.0% |
| ! | TTCCTCTCCGGTGCCGGAAC+CGG | - | Chr8:12091046-12091065 | MsG0880042660.01.T01:CDS | 65.0% |
| !! | CTCCTGTTCTGGCACTGGCG+AGG | + | Chr8:12091165-12091184 | None:intergenic | 65.0% |
| !! | GACGGTGCCACAGCGGTCAA+TGG | - | Chr8:12091310-12091329 | MsG0880042660.01.T01:CDS | 65.0% |
| !! | GAGACGGTGGTGGTTGGTGG+TGG | + | Chr8:12090025-12090044 | None:intergenic | 65.0% |
| AAAACCGACGCGGGGGGAGG+CGG | + | Chr8:12091512-12091531 | None:intergenic | 70.0% | |
| GACCGCTGTGGCACCGTCTG+TGG | + | Chr8:12091308-12091327 | None:intergenic | 70.0% | |
| GGATCTCCGGCGACCGGATG+TGG | - | Chr8:12090677-12090696 | MsG0880042660.01.T01:CDS | 70.0% | |
| GTATCCGGATCTCCGGCGGC+CGG | - | Chr8:12090410-12090429 | MsG0880042660.01.T01:CDS | 70.0% | |
| ! | ACGGCGGAGACGGTGGTGGT+TGG | + | Chr8:12090031-12090050 | None:intergenic | 70.0% |
| ! | GCGGAGACGGTGGTGGTTGG+TGG | + | Chr8:12090028-12090047 | None:intergenic | 70.0% |
| !! | AACGGTGGAGGTGGTGGCGG+TGG | + | Chr8:12091671-12091690 | None:intergenic | 70.0% |
| !! | GGTGGTGGCGGTGGAGGGAT+AGG | + | Chr8:12091662-12091681 | None:intergenic | 70.0% |
| !! | GTGGAGGTGGTGGCGGTGGA+GGG | + | Chr8:12091667-12091686 | None:intergenic | 70.0% |
| ACCTCCGGCCGCCGGAGATC+CGG | + | Chr8:12090417-12090436 | None:intergenic | 75.0% | |
| CAACCACCACCTCCGGCCGC+CGG | + | Chr8:12090425-12090444 | None:intergenic | 75.0% | |
| ! | CTCCGGTTCCGGCACCGGAG+AGG | + | Chr8:12091051-12091070 | None:intergenic | 75.0% |
| !! | GGTGGAGGTGGTGGCGGTGG+AGG | + | Chr8:12091668-12091687 | None:intergenic | 75.0% |
| ! | ACCACCGCCTCCCCCCGCGT+CGG | - | Chr8:12091505-12091524 | MsG0880042660.01.T01:CDS | 80.0% |
| ! | GGATCTCCGGCGGCCGGAGG+TGG | - | Chr8:12090416-12090435 | MsG0880042660.01.T01:CDS | 80.0% |
| ! | TCCGGATCTCCGGCGGCCGG+AGG | - | Chr8:12090413-12090432 | MsG0880042660.01.T01:CDS | 80.0% |
| ! | TCTCCGGCGGCCGGAGGTGG+TGG | - | Chr8:12090419-12090438 | MsG0880042660.01.T01:CDS | 80.0% |
| !!! | GGAGGCGGTGGTGGTGGCGG+AGG | + | Chr8:12091497-12091516 | None:intergenic | 80.0% |
| !!! | GGCGGTGGTGGTGGCGGAGG+TGG | + | Chr8:12091494-12091513 | None:intergenic | 80.0% |
| !!! | GGGGGAGGCGGTGGTGGTGG+CGG | + | Chr8:12091500-12091519 | None:intergenic | 80.0% |
| ! | ACCGACGCGGGGGGAGGCGG+TGG | + | Chr8:12091509-12091528 | None:intergenic | 85.0% |
| ! | GACGCGGGGGGAGGCGGTGG+TGG | + | Chr8:12091506-12091525 | None:intergenic | 85.0% |
| !! | GCGGGGGGAGGCGGTGGTGG+TGG | + | Chr8:12091503-12091522 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 12089970 | 12092036 | 12089970 | ID=MsG0880042660.01;Name=MsG0880042660.01 |
| Chr8 | mRNA | 12089970 | 12092036 | 12089970 | ID=MsG0880042660.01.T01;Parent=MsG0880042660.01;Name=MsG0880042660.01.T01;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|1|1|0|688 |
| Chr8 | exon | 12089970 | 12092036 | 12089970 | ID=MsG0880042660.01.T01:exon:220;Parent=MsG0880042660.01.T01 |
| Chr8 | CDS | 12089970 | 12092036 | 12089970 | ID=MsG0880042660.01.T01:cds;Parent=MsG0880042660.01.T01 |
| Gene Sequence |
| Protein sequence |
