AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042710.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042710.01.T01 MTR_8g020330 85.940 697 39 6 1 672 1 663 0.0 1174
MsG0880042710.01.T01 MTR_8g020330 86.063 696 35 6 1 672 1 658 0.0 1172
MsG0880042710.01.T01 MTR_8g020330 85.449 701 39 7 1 672 1 667 0.0 1168
MsG0880042710.01.T01 MTR_8g020330 85.571 700 35 7 1 672 1 662 0.0 1167
MsG0880042710.01.T01 MTR_8g020330 84.270 623 32 7 1 595 1 585 0.0 1025
MsG0880042710.01.T01 MTR_1g063940 38.095 126 75 2 517 640 305 429 1.15e-17 86.7
MsG0880042710.01.T01 MTR_1g063940 37.795 127 75 3 517 640 305 430 2.52e-17 85.5
MsG0880042710.01.T01 MTR_1g063940 37.795 127 75 3 517 640 313 438 2.75e-17 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042710.01.T01 AT1G72650 38.798 549 267 14 96 642 143 624 7.02e-95 306
MsG0880042710.01.T01 AT1G72650 38.798 549 267 14 96 642 149 630 9.67e-95 306
MsG0880042710.01.T01 AT1G17460 32.583 666 334 22 7 643 5 584 6.43e-71 242
MsG0880042710.01.T01 AT1G17460 31.777 664 321 20 7 643 5 563 4.03e-69 236
MsG0880042710.01.T01 AT1G17460 37.609 460 219 13 186 643 211 604 3.45e-68 235
MsG0880042710.01.T01 AT2G37025 50.000 94 46 1 548 640 288 381 6.39e-20 93.2
MsG0880042710.01.T01 AT2G37025 50.000 94 46 1 548 640 288 381 6.39e-20 93.2
MsG0880042710.01.T01 AT2G37025 50.000 94 46 1 548 640 288 381 6.39e-20 93.2
MsG0880042710.01.T01 AT3G53790 33.600 125 67 4 517 633 272 388 7.03e-11 65.1

Find 168 sgRNAs with CRISPR-Local

Find 494 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAACTTCATGAACTGTTTA+AGG 0.149927 8:+13006552 MsG0880042710.01.T01:CDS
CCCGAGTAACACAAGGAATT+TGG 0.234511 8:-13007125 None:intergenic
GAAGCTAAATGCAAAGTTTC+AGG 0.239086 8:+13005330 MsG0880042710.01.T01:CDS
TTAGACTCTCTTGGAGGTTC+TGG 0.260346 8:+13007099 MsG0880042710.01.T01:CDS
CTAAAATTGGCTCAGGAATC+GGG 0.284289 8:-13010097 None:intergenic
TCTCTCACACGTACTAAAAT+TGG 0.292996 8:-13010110 None:intergenic
AGGCACTGCAGAGGCAGATT+TGG 0.303362 8:+13005307 MsG0880042710.01.T01:CDS
TGTAACCTCTGCGGAAAATA+TGG 0.305933 8:+13006744 MsG0880042710.01.T01:CDS
TCCAAATTCCTTGTGTTACT+CGG 0.328725 8:+13007124 MsG0880042710.01.T01:CDS
ACTAAAATTGGCTCAGGAAT+CGG 0.332607 8:-13010098 None:intergenic
AAGACTGGAAAATCTTAATA+TGG 0.340239 8:+13006849 MsG0880042710.01.T01:CDS
GAACTGTTTAAGGTCACTTT+TGG 0.340400 8:+13006562 MsG0880042710.01.T01:CDS
TTAGGCCTCAATTCCTGCCT+TGG 0.347102 8:-13008840 None:intergenic
CCCTCTGTGGCATGACTTGA+GGG 0.348574 8:-13008873 None:intergenic
ATGCTATAGAATGTGCTTCC+TGG 0.350653 8:-13006360 None:intergenic
GGCACTGCAGAGGCAGATTT+GGG 0.356296 8:+13005308 MsG0880042710.01.T01:CDS
ATACCCAGGCGTTTCACATT+AGG 0.370419 8:+13005287 MsG0880042710.01.T01:intron
AGCTGTTAACTTGCTTGAAC+TGG 0.373535 8:-13010168 None:intergenic
GTGGTAAATGTTCTTGTCTC+TGG 0.379761 8:-13007072 None:intergenic
TATAGTCTTAGTAATCAATC+TGG 0.381950 8:+13006394 MsG0880042710.01.T01:CDS
CGAACAAGTTTGTACACAAC+TGG 0.389839 8:-13003064 None:intergenic
TCAATCGAAAGATCATCTTC+TGG 0.395851 8:+13004839 MsG0880042710.01.T01:CDS
ACGGGCGAGGCTGCAAAGTC+AGG 0.403600 8:+13007806 MsG0880042710.01.T01:CDS
TGCAGACACTGGACAGAGTA+TGG 0.406324 8:+13004808 MsG0880042710.01.T01:CDS
TCTGTCTGAAACTCCATTCC+AGG 0.407475 8:+13006342 MsG0880042710.01.T01:CDS
GGAAACAGTTGTTGGAATTG+AGG 0.407478 8:+13002961 MsG0880042710.01.T01:CDS
CCTTGTTGAGGTATTGAAAC+TGG 0.410633 8:+13008959 MsG0880042710.01.T01:CDS
CAGTTGTGTACAAACTTGTT+CGG 0.413667 8:+13003065 MsG0880042710.01.T01:CDS
ACCTTCACAGGCATTGAACT+TGG 0.414599 8:-13007893 None:intergenic
ACCTTCACAGGCATTGAACT+TGG 0.414599 8:-13007986 None:intergenic
TATCACTCCTCCGGAAGGTC+TGG 0.414828 8:-13006434 None:intergenic
AATAAAGTCGTTAGCAATCA+TGG 0.425285 8:+13007830 MsG0880042710.01.T01:CDS
GACAGATGGAGAAATATGTT+TGG 0.426126 8:+13006513 MsG0880042710.01.T01:CDS
TATTCAATGGAAACAGTTGT+TGG 0.426429 8:+13002953 None:intergenic
TCAGTTGTGCCAATCATTAC+CGG 0.432862 8:-13008816 None:intergenic
TTGCTTGAACTGGAATTTGA+AGG 0.433165 8:-13010158 None:intergenic
TCAAGCAAGTTAACAGCTAA+TGG 0.433448 8:+13010173 MsG0880042710.01.T01:CDS
ACCACCAGGTTAGACTCTCT+TGG 0.437848 8:+13007090 MsG0880042710.01.T01:CDS
GATCAGTGTTCCAGACCTTC+CGG 0.438443 8:+13006424 MsG0880042710.01.T01:CDS
CATGTTATGCCGGGCCTGCT+AGG 0.439474 8:+13007040 MsG0880042710.01.T01:CDS
GATGCTGCAAAAGGTTAAAC+AGG 0.440482 8:+13006219 MsG0880042710.01.T01:intron
TTTCAGAAATTCCATCCAAC+TGG 0.446041 8:+13007782 MsG0880042710.01.T01:intron
GGAATTGAGGATTATGATGA+TGG 0.451484 8:+13002974 MsG0880042710.01.T01:CDS
CATCTTCTGGAAGCTTCGAT+TGG 0.452862 8:+13004852 MsG0880042710.01.T01:CDS
GGTGTGTCGCGGTGTGGACC+AGG 0.455670 8:+13008987 MsG0880042710.01.T01:CDS
GCAGCCTCGCCCGTGCCAGT+TGG 0.456464 8:-13007797 None:intergenic
ATGTCTTAAGTTATTCATCA+TGG 0.457588 8:+13010427 MsG0880042710.01.T01:three_prime_UTR
TAAAAGTACGGGACACATAC+AGG 0.458554 8:+13007008 MsG0880042710.01.T01:CDS
CGCGGTGTGGACCAGGGAGG+TGG 0.459826 8:+13008994 MsG0880042710.01.T01:CDS
ACAAACAGTGGTTGAGGAGG+AGG 0.470154 8:+13006605 MsG0880042710.01.T01:CDS
GATTATGATGATGGGAAGCT+TGG 0.470512 8:+13002983 MsG0880042710.01.T01:CDS
GTCAAGTTCTAATAAAAGTA+CGG 0.470595 8:+13006996 MsG0880042710.01.T01:CDS
GCCCTCTGTGGCATGACTTG+AGG 0.473621 8:-13008874 None:intergenic
GCATCAGAACCATGCTTAGT+TGG 0.474664 8:-13007932 None:intergenic
AAGCAGTATCCGGTAATGAT+TGG 0.478775 8:+13008807 MsG0880042710.01.T01:CDS
CCTCGCCCGTGCCAGTTGGA+TGG 0.484094 8:-13007793 None:intergenic
AGTTGTGTACAAACTTGTTC+GGG 0.487495 8:+13003066 MsG0880042710.01.T01:CDS
CCAAATTCCTTGTGTTACTC+GGG 0.488276 8:+13007125 MsG0880042710.01.T01:CDS
GAGGTATTGAAACTGGTTGA+TGG 0.490269 8:+13008966 MsG0880042710.01.T01:CDS
CCATCCAACTGGCACGGGCG+AGG 0.493525 8:+13007793 MsG0880042710.01.T01:CDS
GAAAGATAAGAAGCAGTATC+CGG 0.494461 8:+13008797 MsG0880042710.01.T01:CDS
AGAAACTTCGCTTGTCATCT+CGG 0.494772 8:+13006245 MsG0880042710.01.T01:CDS
AGTATGCATGGAGACAGAGC+AGG 0.495168 8:+13010215 MsG0880042710.01.T01:CDS
CTCTTCAATATATCGCTTAG+TGG 0.496612 8:-13006935 None:intergenic
ATCAGATGTTCGAAGTATTG+AGG 0.497059 8:+13010388 MsG0880042710.01.T01:three_prime_UTR
ACAGCTAATGGTGCAACTAA+TGG 0.498002 8:+13010185 MsG0880042710.01.T01:CDS
AGTTAATATTCCCACTGCTA+AGG 0.498162 8:+13008902 MsG0880042710.01.T01:CDS
ATAGAATGTGCTTCCTGGAA+TGG 0.499600 8:-13006355 None:intergenic
GGAAAATATGGCTGTACAAA+GGG 0.504045 8:+13006756 MsG0880042710.01.T01:CDS
GCTTCTCCAACATGTTATGC+CGG 0.508015 8:+13007030 MsG0880042710.01.T01:CDS
TGCACCAACACCTGCTGATG+AGG 0.508018 8:+13009243 MsG0880042710.01.T01:CDS
GTCTTGTTTCAGAAGCAACT+TGG 0.508839 8:-13006831 None:intergenic
ACCGTCTGATGAACCTTCAC+AGG 0.512080 8:-13007905 None:intergenic
ACCGTCTGATGAACCTTCAC+AGG 0.512080 8:-13007998 None:intergenic
ATTTGTACATGAGAATGAAC+AGG 0.513633 8:-13006271 None:intergenic
GTTAATATTCCCACTGCTAA+GGG 0.514901 8:+13008903 MsG0880042710.01.T01:CDS
AAATTCCATCCAACTGGCAC+GGG 0.516476 8:+13007788 MsG0880042710.01.T01:CDS
TCTGGATAAGCATTCCTAGC+AGG 0.519734 8:-13007054 None:intergenic
CTGATCCAAGGCAGGAATTG+AGG 0.519818 8:+13008835 MsG0880042710.01.T01:CDS
TATTGAACAGATGCTGCAAA+AGG 0.522438 8:+13006210 MsG0880042710.01.T01:intron
ACGATGTGAGTACGAAGAAA+AGG 0.527449 8:-13009036 None:intergenic
AATCTAGAGAGCAAATTCCT+AGG 0.527590 8:+13006971 MsG0880042710.01.T01:CDS
TCAAGTTCTAATAAAAGTAC+GGG 0.529173 8:+13006997 MsG0880042710.01.T01:CDS
AAGTTTGTACACAACTGGAT+TGG 0.533387 8:-13003059 None:intergenic
GGAGGTGGTCTGAGATCAAA+CGG 0.534301 8:+13009009 MsG0880042710.01.T01:CDS
AGAACCTTCTCATTTCTGAC+AGG 0.535005 8:-13006322 None:intergenic
ATCAACTTCGCAACCACCCA+CGG 0.535596 8:-13006803 None:intergenic
ACATATTTCTCCATCTGTCA+TGG 0.536255 8:-13006509 None:intergenic
AGTTGCTTCTGAAACAAGAC+TGG 0.537136 8:+13006834 MsG0880042710.01.T01:CDS
CTTCGATTGGAGTGCTCGGA+AGG 0.537545 8:+13004865 MsG0880042710.01.T01:CDS
CTTCTCCAACATGTTATGCC+GGG 0.538783 8:+13007031 MsG0880042710.01.T01:CDS
CGGAAAATATGGCTGTACAA+AGG 0.539341 8:+13006755 MsG0880042710.01.T01:CDS
TTGATCTCAGACCACCTCCC+TGG 0.544021 8:-13009005 None:intergenic
TCTTCAATATATCGCTTAGT+GGG 0.545730 8:-13006934 None:intergenic
CAGATGAATTCGCGGAAGCA+TGG 0.549879 8:+13010068 MsG0880042710.01.T01:intron
ACCAGGTTAGACTCTCTTGG+AGG 0.551035 8:+13007093 MsG0880042710.01.T01:CDS
ACCACTTTCTATCACTCCTC+CGG 0.551691 8:-13006443 None:intergenic
ACACGTACTAAAATTGGCTC+AGG 0.556714 8:-13010104 None:intergenic
GTGTATGACAGATGAATTCG+CGG 0.560439 8:+13010060 MsG0880042710.01.T01:intron
CCCTCAAGTCATGCCACAGA+GGG 0.560986 8:+13008873 MsG0880042710.01.T01:CDS
GCACCAACACCTGCTGATGA+GGG 0.561140 8:+13009244 MsG0880042710.01.T01:CDS
CTCATTCCACCCTTAGCAGT+GGG 0.563593 8:-13008912 None:intergenic
TTATTAGAACTTGACGACCT+AGG 0.567947 8:-13006988 None:intergenic
ATAGTCTTAGTAATCAATCT+GGG 0.568164 8:+13006395 MsG0880042710.01.T01:CDS
ACTGGATTGGAAATCCGCTT+CGG 0.568642 8:-13003046 None:intergenic
ATTTCCTGTCAGAAATGAGA+AGG 0.570033 8:+13006318 MsG0880042710.01.T01:CDS
GAAATTCCATCCAACTGGCA+CGG 0.574444 8:+13007787 MsG0880042710.01.T01:intron
TTGCTTTGCAGGACAAGTGG+AGG 0.574686 8:+13009200 MsG0880042710.01.T01:intron
GCCAAGTTCAATGCCTGTGA+AGG 0.575095 8:+13007892 MsG0880042710.01.T01:CDS
GCCAAGTTCAATGCCTGTGA+AGG 0.575095 8:+13007985 MsG0880042710.01.T01:CDS
GTATAATGATTCAAAAGCCG+TGG 0.575963 8:+13006786 MsG0880042710.01.T01:CDS
GGAACATGAATTAGAAGATG+AGG 0.581860 8:+13006870 MsG0880042710.01.T01:CDS
TGATGCTGATAGTGAAATTG+AGG 0.581949 8:+13007856 MsG0880042710.01.T01:CDS
TGATGCTGATAGTGAAATTG+AGG 0.581949 8:+13007949 MsG0880042710.01.T01:CDS
GCCTGTGAAGGTTCATCAGA+CGG 0.582544 8:+13007904 MsG0880042710.01.T01:CDS
GCCTGTGAAGGTTCATCAGA+CGG 0.582544 8:+13007997 MsG0880042710.01.T01:CDS
GAAATTTATCAGCAGAACAC+TGG 0.582582 8:-13006300 None:intergenic
GTGTGTCGCGGTGTGGACCA+GGG 0.582938 8:+13008988 MsG0880042710.01.T01:CDS
TGGCACAACTGATCCAAGGC+AGG 0.586281 8:+13008827 MsG0880042710.01.T01:CDS
GAAGCTTCGATTGGAGTGCT+CGG 0.587115 8:+13004861 MsG0880042710.01.T01:CDS
ATAAGCATTCCTAGCAGGCC+CGG 0.588525 8:-13007049 None:intergenic
GGAGGAAGCATCATCGAGCA+TGG 0.588802 8:+13008934 MsG0880042710.01.T01:CDS
TCGTACCTCTGTTGATCTCA+AGG 0.591435 8:+13009055 MsG0880042710.01.T01:CDS
TGAAAGACAAACAGTGGTTG+AGG 0.593919 8:+13006599 MsG0880042710.01.T01:CDS
TCCGGAGGAGTGATAGAAAG+TGG 0.595035 8:+13006442 MsG0880042710.01.T01:CDS
AATGGTGCAAGGAGTATGCA+TGG 0.595350 8:+13010203 MsG0880042710.01.T01:CDS
ATGGGAAGCTTGGAGACCGT+GGG 0.600318 8:+13002993 MsG0880042710.01.T01:CDS
ATGCTTTGTCTTCACCGAAG+CGG 0.604040 8:+13003032 MsG0880042710.01.T01:CDS
GACTGCTTCTATCAATCCCA+CGG 0.607200 8:-13003009 None:intergenic
GAATTGAGGATTATGATGAT+GGG 0.607731 8:+13002975 MsG0880042710.01.T01:CDS
GAAATGCGTGTTGCAGACAC+TGG 0.614142 8:+13004797 MsG0880042710.01.T01:CDS
ACCAACACCTGCTGATGAGG+GGG 0.616120 8:+13009246 MsG0880042710.01.T01:CDS
GTTGATGGTGTGTCGCGGTG+TGG 0.617079 8:+13008981 MsG0880042710.01.T01:CDS
CCTCATTCCACCCTTAGCAG+TGG 0.618351 8:-13008913 None:intergenic
GCAGGCCCGGCATAACATGT+TGG 0.619397 8:-13007036 None:intergenic
TCGAGCATGGACCCTTGTTG+AGG 0.624113 8:+13008947 MsG0880042710.01.T01:CDS
CTTTCTATCACTCCTCCGGA+AGG 0.629182 8:-13006439 None:intergenic
CCAGTTTCAATACCTCAACA+AGG 0.630743 8:-13008959 None:intergenic
AGACAAGAACATTTACCACC+AGG 0.632627 8:+13007076 MsG0880042710.01.T01:CDS
CACCAACACCTGCTGATGAG+GGG 0.632966 8:+13009245 MsG0880042710.01.T01:CDS
GTATGCATGGAGACAGAGCA+GGG 0.633101 8:+13010216 MsG0880042710.01.T01:CDS
CTGCTAAGGGTGGAATGAGG+AGG 0.634715 8:+13008916 MsG0880042710.01.T01:CDS
AATATTCCCACTGCTAAGGG+TGG 0.635127 8:+13008906 MsG0880042710.01.T01:CDS
TAAAATTGGCTCAGGAATCG+GGG 0.636315 8:-13010096 None:intergenic
TGATTGGCACAACTGATCCA+AGG 0.638247 8:+13008823 MsG0880042710.01.T01:CDS
CTTCGCACCCGAGTAACACA+AGG 0.639559 8:-13007132 None:intergenic
ACGGTAAGACCAACTAAGCA+TGG 0.639838 8:+13007923 MsG0880042710.01.T01:CDS
ACCTCCAAGAGAGTCTAACC+TGG 0.641656 8:-13007094 None:intergenic
ATTAACTATATTGCCCTCTG+TGG 0.645795 8:-13008886 None:intergenic
ATGGTGCAACTAATGGTGCA+AGG 0.647506 8:+13010192 MsG0880042710.01.T01:CDS
GATGGGAAGCTTGGAGACCG+TGG 0.648980 8:+13002992 MsG0880042710.01.T01:CDS
TTTCACATTAGGCACTGCAG+AGG 0.649466 8:+13005298 MsG0880042710.01.T01:CDS
CCACTGCTAAGGGTGGAATG+AGG 0.651906 8:+13008913 MsG0880042710.01.T01:CDS
TATAATGATTCAAAAGCCGT+GGG 0.654536 8:+13006787 MsG0880042710.01.T01:CDS
AAGACAAACAGTGGTTGAGG+AGG 0.656203 8:+13006602 MsG0880042710.01.T01:CDS
GGGTGCGAAGAAGTCGTCCA+CGG 0.656929 8:+13007145 MsG0880042710.01.T01:CDS
AACTGGTTGATGGTGTGTCG+CGG 0.661368 8:+13008976 MsG0880042710.01.T01:CDS
CAAAGCGGAATTGACAGCAG+AGG 0.662074 8:-13006473 None:intergenic
AATGATTCAAAAGCCGTGGG+TGG 0.666719 8:+13006790 MsG0880042710.01.T01:CDS
CTACTGTGAAAGACAAACAG+TGG 0.669591 8:+13006593 MsG0880042710.01.T01:CDS
TCCCTCAAGTCATGCCACAG+AGG 0.700875 8:+13008872 MsG0880042710.01.T01:CDS
TCCAAGAGAGTCTAACCTGG+TGG 0.701922 8:-13007091 None:intergenic
TGCTGCAGCTGTAACCTCTG+CGG 0.706466 8:+13006735 MsG0880042710.01.T01:CDS
CAGTGTTCCAGACCTTCCGG+AGG 0.711228 8:+13006427 MsG0880042710.01.T01:CDS
TGTCGCGGTGTGGACCAGGG+AGG 0.718246 8:+13008991 MsG0880042710.01.T01:CDS
GAGTACCTTGAGATCAACAG+AGG 0.719395 8:-13009060 None:intergenic
CAGTTTCAATACCTCAACAA+GGG 0.719688 8:-13008958 None:intergenic
AATTGGCTCAGGAATCGGGG+CGG 0.733377 8:-13010093 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGAACAAAAAAAATAAT+GGG - Chr8:13009626-13009645 None:intergenic 10.0%
!! GATTTATTAAGTTATTTATT+TGG - Chr8:13003570-13003589 None:intergenic 10.0%
!!! AGTTAAATACTTTTTTTTTT+TGG - Chr8:13010296-13010315 None:intergenic 10.0%
!!! GTTAAATACTTTTTTTTTTT+GGG - Chr8:13010295-13010314 None:intergenic 10.0%
!!! TTTAATTACAATAATCATTT+TGG - Chr8:13009506-13009525 None:intergenic 10.0%
!!! TTTTATTTTTCTTGATTAAT+GGG + Chr8:13006088-13006107 MsG0880042710.01.T01:intron 10.0%
!!! TTTTTATTTTTCTTGATTAA+TGG + Chr8:13006087-13006106 MsG0880042710.01.T01:intron 10.0%
!! AAAAGGAAAAGAAAAAAAAA+AGG - Chr8:13003688-13003707 None:intergenic 15.0%
!! AATATATTTGAAAGGTAATT+TGG + Chr8:13004582-13004601 MsG0880042710.01.T01:intron 15.0%
!! AGAAATTCATTAAGATAAAA+AGG + Chr8:13008119-13008138 MsG0880042710.01.T01:intron 15.0%
!! GATATGAACAAAAAAAATAA+TGG - Chr8:13009627-13009646 None:intergenic 15.0%
!! TATTTATATTAAGTATCACA+TGG + Chr8:13005898-13005917 MsG0880042710.01.T01:intron 15.0%
!! TCTACATTTCATAATTAATA+AGG - Chr8:13005555-13005574 None:intergenic 15.0%
!!! GAAAATTTAAATTAAGTTGA+AGG - Chr8:13005641-13005660 None:intergenic 15.0%
!!! TTTGAATTTTGTTAAGTTTT+AGG + Chr8:13005201-13005220 MsG0880042710.01.T01:intron 15.0%
!! AAATCAAAATGACTATAACA+TGG - Chr8:13008736-13008755 None:intergenic 20.0%
!! AACCATGTAACAAAAAATTA+GGG - Chr8:13004625-13004644 None:intergenic 20.0%
!! AAGGATGAATATTATTACAA+AGG + Chr8:13008138-13008157 MsG0880042710.01.T01:intron 20.0%
!! AATAGAAAAAAATAAAGGAG+AGG - Chr8:13008698-13008717 None:intergenic 20.0%
!! AATCATAAGATCTACTAATA+AGG - Chr8:13004367-13004386 None:intergenic 20.0%
!! ACATTTCATAATTAATAAGG+AGG - Chr8:13005552-13005571 None:intergenic 20.0%
!! ATAAACACAATTAGAAAGTT+AGG + Chr8:13007502-13007521 MsG0880042710.01.T01:intron 20.0%
!! ATCATTCTAATAAAAATGTG+TGG - Chr8:13003595-13003614 None:intergenic 20.0%
!! ATGAATAACTAGACTATAAA+AGG - Chr8:13003763-13003782 None:intergenic 20.0%
!! ATGAATGCAATCATAAATAA+CGG - Chr8:13003653-13003672 None:intergenic 20.0%
!! CAAAAACAAAGTACAATTAT+AGG + Chr8:13008161-13008180 MsG0880042710.01.T01:intron 20.0%
!! GAATGATAAAAAGAGTTAAT+AGG - Chr8:13009737-13009756 None:intergenic 20.0%
!! TAAACACAATTAGAAAGTTA+GGG + Chr8:13007503-13007522 MsG0880042710.01.T01:intron 20.0%
!! TACATATATGTTCTAACTTA+TGG + Chr8:13004273-13004292 MsG0880042710.01.T01:intron 20.0%
!! TCATATATTTAAGCAAGAAA+AGG - Chr8:13007202-13007221 None:intergenic 20.0%
!! TCCATTTATTATCGAAAATT+TGG - Chr8:13004521-13004540 None:intergenic 20.0%
!! TGAAAAGGAATATATTTGAA+AGG + Chr8:13004574-13004593 MsG0880042710.01.T01:intron 20.0%
!! TTGGAATATAATTATTTCCA+GGG - Chr8:13009487-13009506 None:intergenic 20.0%
!! TTGTTACTAGATATAATACA+TGG + Chr8:13005833-13005852 MsG0880042710.01.T01:intron 20.0%
!! TTTATATTTAAGTGATTGCA+TGG + Chr8:13004458-13004477 MsG0880042710.01.T01:intron 20.0%
!!! AAATTAGTTCTTAGTTGTTA+CGG + Chr8:13009537-13009556 MsG0880042710.01.T01:intron 20.0%
!!! AAGAAAAAAAAAAGGTATCA+AGG - Chr8:13003680-13003699 None:intergenic 20.0%
!!! ATGTTATGTGTAGTTTTATT+TGG + Chr8:13006020-13006039 MsG0880042710.01.T01:intron 20.0%
!!! CATATATTCTTTTTGTTTGT+TGG + Chr8:13003419-13003438 MsG0880042710.01.T01:intron 20.0%
!!! GATGTTAAGATTGTTTTTTT+AGG + Chr8:13003886-13003905 MsG0880042710.01.T01:intron 20.0%
!!! TAACTATTAGAAGTATTGAT+AGG + Chr8:13008506-13008525 MsG0880042710.01.T01:intron 20.0%
!!! TAAGATTGTTTTTTTAGGAT+CGG + Chr8:13003891-13003910 MsG0880042710.01.T01:intron 20.0%
!!! TATACTAGAAGAAATTTTAG+AGG - Chr8:13006192-13006211 None:intergenic 20.0%
!!! TATAGTCATTTTGATTTTGT+GGG + Chr8:13008739-13008758 MsG0880042710.01.T01:intron 20.0%
!!! TATCATATATCAGTTATTTC+TGG - Chr8:13007711-13007730 None:intergenic 20.0%
!!! TCCAAATTTTCGATAATAAA+TGG + Chr8:13004517-13004536 MsG0880042710.01.T01:intron 20.0%
!!! TTATAGTCATTTTGATTTTG+TGG + Chr8:13008738-13008757 MsG0880042710.01.T01:intron 20.0%
!!! TTTGGAATATAATTATTTCC+AGG - Chr8:13009488-13009507 None:intergenic 20.0%
!!! TTTTTATGAGTCTCTTAAAT+TGG + Chr8:13005979-13005998 MsG0880042710.01.T01:intron 20.0%
! AAACTCTATGCATCTAAAAA+AGG - Chr8:13010340-13010359 None:intergenic 25.0%
! AACTACACATAACATTGTAA+AGG - Chr8:13006015-13006034 None:intergenic 25.0%
! AAGACTGGAAAATCTTAATA+TGG + Chr8:13006849-13006868 MsG0880042710.01.T01:CDS 25.0%
! ACTAAGAACTAATTTGATTG+AGG - Chr8:13009532-13009551 None:intergenic 25.0%
! AGAAAATAAAAACAATTGCC+AGG - Chr8:13007736-13007755 None:intergenic 25.0%
! AGTTTGTCAAAAATGAAGTT+TGG - Chr8:13005728-13005747 None:intergenic 25.0%
! ATAATGCAACCAAATTACAA+AGG - Chr8:13004488-13004507 None:intergenic 25.0%
! ATCTACTACAAAATATCTGA+TGG + Chr8:13003727-13003746 MsG0880042710.01.T01:intron 25.0%
! ATGTCTTAAGTTATTCATCA+TGG + Chr8:13010427-13010446 MsG0880042710.01.T01:three_prime_UTR 25.0%
! CCGTCAACATAAAAAAATTA+CGG - Chr8:13003991-13004010 None:intergenic 25.0%
! GAAAAATATCACATCTCTTA+TGG + Chr8:13007167-13007186 MsG0880042710.01.T01:CDS 25.0%
! GAACCATGTAACAAAAAATT+AGG - Chr8:13004626-13004645 None:intergenic 25.0%
! GGCTTCTTAATTATTAGATT+GGG - Chr8:13003548-13003567 None:intergenic 25.0%
! GTCATAAAACAACTAAAAGA+AGG - Chr8:13005044-13005063 None:intergenic 25.0%
! TATATGATTAGAACACTTCA+TGG - Chr8:13003405-13003424 None:intergenic 25.0%
! TATTAGTCGCTAAAAATTGT+AGG - Chr8:13009670-13009689 None:intergenic 25.0%
! TCTATCAGAGATACATATAA+AGG + Chr8:13005508-13005527 MsG0880042710.01.T01:intron 25.0%
! TGAAAATGGAATTTATTGTG+TGG + Chr8:13004551-13004570 MsG0880042710.01.T01:intron 25.0%
! TGATGTATGCTTAGTTTATA+TGG + Chr8:13005177-13005196 MsG0880042710.01.T01:intron 25.0%
! TGGATGTTGAAATTTGAAAA+TGG + Chr8:13004537-13004556 MsG0880042710.01.T01:intron 25.0%
! TTATATGTATCTCTGATAGA+AGG - Chr8:13005508-13005527 None:intergenic 25.0%
! TTCTTAATTATTAGATTGGG+CGG - Chr8:13003545-13003564 None:intergenic 25.0%
!! AATTAGTTCTTAGTTGTTAC+GGG + Chr8:13009538-13009557 MsG0880042710.01.T01:intron 25.0%
!! ATAGTCTTAGTAATCAATCT+GGG + Chr8:13006395-13006414 MsG0880042710.01.T01:CDS 25.0%
!! ATTTGAGGAATTTTCATTTC+TGG - Chr8:13009865-13009884 None:intergenic 25.0%
!! CAAAAAAAATAATGGGAGAT+AGG - Chr8:13009619-13009638 None:intergenic 25.0%
!! GTCAAGTTCTAATAAAAGTA+CGG + Chr8:13006996-13007015 MsG0880042710.01.T01:CDS 25.0%
!! GTTCAGTTTTTAAACATTTG+AGG - Chr8:13009880-13009899 None:intergenic 25.0%
!! TATAGTCTTAGTAATCAATC+TGG + Chr8:13006394-13006413 MsG0880042710.01.T01:CDS 25.0%
!! TCAAGTTCTAATAAAAGTAC+GGG + Chr8:13006997-13007016 MsG0880042710.01.T01:CDS 25.0%
!!! ACAATTTTTAGCGACTAATA+TGG + Chr8:13009670-13009689 MsG0880042710.01.T01:intron 25.0%
!!! AGAAATTTTAGAGGTAAAGA+AGG - Chr8:13006183-13006202 None:intergenic 25.0%
!!! ATTTTTTTATGTTGACGGTT+CGG + Chr8:13003993-13004012 MsG0880042710.01.T01:intron 25.0%
!!! CAAAGTTTTAAAAACCAAAC+TGG - Chr8:13009965-13009984 None:intergenic 25.0%
!!! CCGTAATTTTTTTATGTTGA+CGG + Chr8:13003988-13004007 MsG0880042710.01.T01:intron 25.0%
!!! TGGTAGTATTTTGTTTTCTA+GGG + Chr8:13006156-13006175 MsG0880042710.01.T01:intron 25.0%
!!! TTCCCTAATTTTTTGTTACA+TGG + Chr8:13004620-13004639 MsG0880042710.01.T01:intron 25.0%
!!! TTCCTTTTTGTTTGTTTCTT+CGG + Chr8:13005408-13005427 MsG0880042710.01.T01:intron 25.0%
!!! TTGGTAGTATTTTGTTTTCT+AGG + Chr8:13006155-13006174 MsG0880042710.01.T01:intron 25.0%
AAAAAACTAAACCCAGATTG+GGG - Chr8:13003960-13003979 None:intergenic 30.0%
AAACTGGTAGAGAACATATA+AGG + Chr8:13009135-13009154 MsG0880042710.01.T01:intron 30.0%
AACAAAATACTACCAATGTC+AGG - Chr8:13006151-13006170 None:intergenic 30.0%
AACACGTAGATTATGTAGTA+AGG + Chr8:13003304-13003323 MsG0880042710.01.T01:intron 30.0%
AAGCATGTATATATGTACTC+TGG - Chr8:13005944-13005963 None:intergenic 30.0%
AATAAAGTCGTTAGCAATCA+TGG + Chr8:13007830-13007849 MsG0880042710.01.T01:CDS 30.0%
AATAATGACATAACTGCATC+AGG + Chr8:13005610-13005629 MsG0880042710.01.T01:intron 30.0%
AATTTATGACAATGTCTGTG+TGG + Chr8:13008189-13008208 MsG0880042710.01.T01:intron 30.0%
ACATATATACATGCTTGGTT+GGG + Chr8:13005948-13005967 MsG0880042710.01.T01:intron 30.0%
AGAACTTCATGAACTGTTTA+AGG + Chr8:13006552-13006571 MsG0880042710.01.T01:CDS 30.0%
AGAGTACATATATACATGCT+TGG + Chr8:13005943-13005962 MsG0880042710.01.T01:intron 30.0%
AGCATTGTTCAGATAAAACA+TGG - Chr8:13009760-13009779 None:intergenic 30.0%
ATAAACAACATTCAAATCCC+TGG - Chr8:13005019-13005038 None:intergenic 30.0%
ATAATGACATAACTGCATCA+GGG + Chr8:13005611-13005630 MsG0880042710.01.T01:intron 30.0%
ATATATTACGAGTGAATCAC+CGG + Chr8:13009426-13009445 MsG0880042710.01.T01:intron 30.0%
ATGATAAGACTAGACATGAT+AGG + Chr8:13003184-13003203 MsG0880042710.01.T01:intron 30.0%
ATTTGTACATGAGAATGAAC+AGG - Chr8:13006274-13006293 None:intergenic 30.0%
CAAAAAACTAAACCCAGATT+GGG - Chr8:13003961-13003980 None:intergenic 30.0%
CAAAGTAACAAAGACAGATT+GGG - Chr8:13003492-13003511 None:intergenic 30.0%
CACGATCATACAATTTAGAA+CGG + Chr8:13003845-13003864 MsG0880042710.01.T01:intron 30.0%
CTAATGACACAAAGAGATAA+AGG - Chr8:13005672-13005691 None:intergenic 30.0%
GAATTGAGGATTATGATGAT+GGG + Chr8:13002975-13002994 MsG0880042710.01.T01:CDS 30.0%
GAATTTATTGTGTGGTGAAA+AGG + Chr8:13004559-13004578 MsG0880042710.01.T01:intron 30.0%
GAGAAATAAGTTAGCTAACA+TGG - Chr8:13005233-13005252 None:intergenic 30.0%
GCATTGTTCAGATAAAACAT+GGG - Chr8:13009759-13009778 None:intergenic 30.0%
GGGCTTCTTAATTATTAGAT+TGG - Chr8:13003549-13003568 None:intergenic 30.0%
GGTATTAGTTGGAAGAAAAT+AGG - Chr8:13005272-13005291 None:intergenic 30.0%
GTAACAGTGTTCTCAAATAT+CGG + Chr8:13008399-13008418 MsG0880042710.01.T01:intron 30.0%
GTGATTCACTCGTAATATAT+GGG - Chr8:13009426-13009445 None:intergenic 30.0%
TAACTGATATATGATAGTCC+TGG + Chr8:13007715-13007734 MsG0880042710.01.T01:intron 30.0%
TACATATATACATGCTTGGT+TGG + Chr8:13005947-13005966 MsG0880042710.01.T01:intron 30.0%
TACTTTGTGATGCTATAGTT+TGG + Chr8:13005792-13005811 MsG0880042710.01.T01:intron 30.0%
TAGGAAGTGATAACAAGTAA+TGG + Chr8:13008525-13008544 MsG0880042710.01.T01:intron 30.0%
TATAATGATTCAAAAGCCGT+GGG + Chr8:13006787-13006806 MsG0880042710.01.T01:CDS 30.0%
TATGACTCAAATTTGTGTGT+TGG + Chr8:13005058-13005077 MsG0880042710.01.T01:intron 30.0%
TATGTTTATTGAGTCCAAGA+TGG - Chr8:13005878-13005897 None:intergenic 30.0%
TATTCTTTATGAATTGGCCA+CGG - Chr8:13008448-13008467 None:intergenic 30.0%
TCAAAGTAACAAAGACAGAT+TGG - Chr8:13003493-13003512 None:intergenic 30.0%
TCTTAATTATTAGATTGGGC+GGG - Chr8:13003544-13003563 None:intergenic 30.0%
TCTTCAATATATCGCTTAGT+GGG - Chr8:13006937-13006956 None:intergenic 30.0%
TGAGTTCGTGTGTTTAATAA+AGG - Chr8:13008370-13008389 None:intergenic 30.0%
TGATATCTGATATGATGTTC+AGG + Chr8:13004699-13004718 MsG0880042710.01.T01:intron 30.0%
TGTTGAAATTACAGGTGTTT+AGG + Chr8:13007277-13007296 MsG0880042710.01.T01:intron 30.0%
TTAATAAATAGGCTCATCAC+TGG - Chr8:13005587-13005606 None:intergenic 30.0%
TTCCTATTGATGTTGTCTTT+AGG + Chr8:13007606-13007625 MsG0880042710.01.T01:intron 30.0%
TTGCTAGTGATATTCGTATA+AGG + Chr8:13008037-13008056 MsG0880042710.01.T01:intron 30.0%
! ACGATCATACAATTTAGAAC+GGG + Chr8:13003846-13003865 MsG0880042710.01.T01:intron 30.0%
! ATAGAGTTTTGCAATGTTGT+AGG + Chr8:13010351-13010370 MsG0880042710.01.T01:three_prime_UTR 30.0%
! CCTAGTAAAAGTACAAATCA+CGG - Chr8:13004661-13004680 None:intergenic 30.0%
! GAACATATAAGGCTAGATTT+TGG + Chr8:13009146-13009165 MsG0880042710.01.T01:intron 30.0%
! GATATTTTGTAGTAGATTGC+AGG - Chr8:13003724-13003743 None:intergenic 30.0%
! TCAATCATACTAGTCCTTTT+GGG - Chr8:13009590-13009609 None:intergenic 30.0%
! TCGATTATCACTTGAGATTT+TGG + Chr8:13005142-13005161 MsG0880042710.01.T01:intron 30.0%
! TTACTTGTTTAAGATGTCGT+TGG + Chr8:13008308-13008327 MsG0880042710.01.T01:intron 30.0%
! TTTTAGACGATCGCTTAAAA+TGG - Chr8:13007408-13007427 None:intergenic 30.0%
! TTTTCCTTTTCTTCCAGAAT+TGG + Chr8:13003698-13003717 MsG0880042710.01.T01:intron 30.0%
! TTTTGCAGTGTTAAGCAATT+TGG - Chr8:13010268-13010287 None:intergenic 30.0%
!! AGTTTTATCTCTGAAAAACC+AGG + Chr8:13004998-13005017 MsG0880042710.01.T01:intron 30.0%
!! CCACAATTTTAGAGAAAAAC+CGG - Chr8:13009448-13009467 None:intergenic 30.0%
!! CGTGATTTGTACTTTTACTA+GGG + Chr8:13004659-13004678 MsG0880042710.01.T01:intron 30.0%
!! GCTTTTCTCTGGTTATTTTA+AGG + Chr8:13007570-13007589 MsG0880042710.01.T01:intron 30.0%
!! GTTTTATCTCTGAAAAACCA+GGG + Chr8:13004999-13005018 MsG0880042710.01.T01:intron 30.0%
!! TAGAGTCAACTATTTTTCCA+GGG + Chr8:13004952-13004971 MsG0880042710.01.T01:intron 30.0%
!! TCAATAGGAAGCATTAGATT+TGG - Chr8:13007596-13007615 None:intergenic 30.0%
!! TTAGAGTCAACTATTTTTCC+AGG + Chr8:13004951-13004970 MsG0880042710.01.T01:intron 30.0%
!!! CGGTTTTTCTCTAAAATTGT+GGG + Chr8:13009446-13009465 MsG0880042710.01.T01:intron 30.0%
!!! GGTTTTTCTCTAAAATTGTG+GGG + Chr8:13009447-13009466 MsG0880042710.01.T01:intron 30.0%
!!! GTGTAGTTTTATTTGGAAAG+TGG + Chr8:13006027-13006046 MsG0880042710.01.T01:intron 30.0%
!!! GTTTTAAAAACCAAACTGGA+CGG - Chr8:13009961-13009980 None:intergenic 30.0%
!!! TTTTTTTATGTTGACGGTTC+GGG + Chr8:13003994-13004013 MsG0880042710.01.T01:intron 30.0%
AAAGCCACCATAAAACATCA+TGG - Chr8:13008477-13008496 None:intergenic 35.0%
AAATATGCCAACACATTCCA+CGG - Chr8:13009360-13009379 None:intergenic 35.0%
AAGTTTGTACACAACTGGAT+TGG - Chr8:13003062-13003081 None:intergenic 35.0%
AATCGTTGTATTGCAGTGTT+TGG + Chr8:13003794-13003813 MsG0880042710.01.T01:intron 35.0%
AATCTAGAGAGCAAATTCCT+AGG + Chr8:13006971-13006990 MsG0880042710.01.T01:CDS 35.0%
AATGACAACATTAGAGAGAG+AGG + Chr8:13003213-13003232 MsG0880042710.01.T01:intron 35.0%
ACACTTCATGGACAATGATT+AGG - Chr8:13003393-13003412 None:intergenic 35.0%
ACATATTTCTCCATCTGTCA+TGG - Chr8:13006512-13006531 None:intergenic 35.0%
ACTATATTGACATGCCCAAA+AGG + Chr8:13009573-13009592 MsG0880042710.01.T01:intron 35.0%
ACTGTTGAACTTGTGAAAAC+TGG + Chr8:13009119-13009138 MsG0880042710.01.T01:intron 35.0%
AGTAAACCAATGCATTTCCT+AGG - Chr8:13007654-13007673 None:intergenic 35.0%
AGTAACTTGAGGACAAATTC+AGG - Chr8:13009840-13009859 None:intergenic 35.0%
AGTTAATATTCCCACTGCTA+AGG + Chr8:13008902-13008921 MsG0880042710.01.T01:CDS 35.0%
ATCACTAGCAAATGCTTAGT+TGG - Chr8:13008028-13008047 None:intergenic 35.0%
ATCGAGAGAAACAAAACTTC+AGG - Chr8:13005127-13005146 None:intergenic 35.0%
ATGCAAGCTGTTGAAATTAC+AGG + Chr8:13007269-13007288 MsG0880042710.01.T01:intron 35.0%
ATGTGTTCATATCCTGACAT+TGG + Chr8:13006136-13006155 MsG0880042710.01.T01:intron 35.0%
ATTAACTATATTGCCCTCTG+TGG - Chr8:13008889-13008908 None:intergenic 35.0%
ATTTCCTGTCAGAAATGAGA+AGG + Chr8:13006318-13006337 MsG0880042710.01.T01:CDS 35.0%
CAACTGATTGAACCATGATT+GGG - Chr8:13009936-13009955 None:intergenic 35.0%
CAAGCGTTAAGAGTCAATTA+AGG - Chr8:13008637-13008656 None:intergenic 35.0%
CACTGCAATACAACGATTAA+AGG - Chr8:13003792-13003811 None:intergenic 35.0%
CACTTCATGGACAATGATTA+GGG - Chr8:13003392-13003411 None:intergenic 35.0%
CAGTTTCAATACCTCAACAA+GGG - Chr8:13008961-13008980 None:intergenic 35.0%
CATATATGTACTCTATGCAG+AGG - Chr8:13004263-13004282 None:intergenic 35.0%
CATGACAAGGATTTATGACA+AGG - Chr8:13009096-13009115 None:intergenic 35.0%
CCAAAAAACTAAACCCAGAT+TGG - Chr8:13003962-13003981 None:intergenic 35.0%
CGTATGTATGTTTGTCTTTG+TGG + Chr8:13008092-13008111 MsG0880042710.01.T01:intron 35.0%
CTAGACTATAAAAGGAAGAC+TGG - Chr8:13003755-13003774 None:intergenic 35.0%
CTATGCATCTAAAAAAGGAC+TGG - Chr8:13010335-13010354 None:intergenic 35.0%
CTCTTCAATATATCGCTTAG+TGG - Chr8:13006938-13006957 None:intergenic 35.0%
CTTAATTATTAGATTGGGCG+GGG - Chr8:13003543-13003562 None:intergenic 35.0%
GAAAGATAAGAAGCAGTATC+CGG + Chr8:13008797-13008816 MsG0880042710.01.T01:CDS 35.0%
GAAATTTATCAGCAGAACAC+TGG - Chr8:13006303-13006322 None:intergenic 35.0%
GAAGCTAAATGCAAAGTTTC+AGG + Chr8:13005330-13005349 MsG0880042710.01.T01:CDS 35.0%
GACAGATGGAGAAATATGTT+TGG + Chr8:13006513-13006532 MsG0880042710.01.T01:CDS 35.0%
GATAACTGACTGCTTTGATA+TGG + Chr8:13008664-13008683 MsG0880042710.01.T01:intron 35.0%
GGAAAAATCATGCTTCAAAG+CGG - Chr8:13006491-13006510 None:intergenic 35.0%
GGAAAATATGGCTGTACAAA+GGG + Chr8:13006756-13006775 MsG0880042710.01.T01:CDS 35.0%
GGAACATGAATTAGAAGATG+AGG + Chr8:13006870-13006889 MsG0880042710.01.T01:CDS 35.0%
GGAATTGAGGATTATGATGA+TGG + Chr8:13002974-13002993 MsG0880042710.01.T01:CDS 35.0%
GGCCAATTCATAAAGAATAG+CGG + Chr8:13008449-13008468 MsG0880042710.01.T01:intron 35.0%
GGTGATTCACTCGTAATATA+TGG - Chr8:13009427-13009446 None:intergenic 35.0%
GTAACTTGAGGACAAATTCA+GGG - Chr8:13009839-13009858 None:intergenic 35.0%
GTATAATGATTCAAAAGCCG+TGG + Chr8:13006786-13006805 MsG0880042710.01.T01:CDS 35.0%
GTATATATGTACTCTGGTCA+AGG - Chr8:13005938-13005957 None:intergenic 35.0%
GTTAATATTCCCACTGCTAA+GGG + Chr8:13008903-13008922 MsG0880042710.01.T01:CDS 35.0%
TAATGACATAACTGCATCAG+GGG + Chr8:13005612-13005631 MsG0880042710.01.T01:intron 35.0%
TATCAAGTCTCAAGTATGCA+TGG - Chr8:13009386-13009405 None:intergenic 35.0%
TATTGAACAGATGCTGCAAA+AGG + Chr8:13006210-13006229 MsG0880042710.01.T01:intron 35.0%
TCAACTGATTGAACCATGAT+TGG - Chr8:13009937-13009956 None:intergenic 35.0%
TCAAGCAAGTTAACAGCTAA+TGG + Chr8:13010173-13010192 MsG0880042710.01.T01:CDS 35.0%
TCAATCGAAAGATCATCTTC+TGG + Chr8:13004839-13004858 MsG0880042710.01.T01:CDS 35.0%
TCTCTCACACGTACTAAAAT+TGG - Chr8:13010113-13010132 None:intergenic 35.0%
TGCAAAAAATTCCCCAATCT+GGG + Chr8:13003946-13003965 MsG0880042710.01.T01:intron 35.0%
TGCCGAAGAAACAAACAAAA+AGG - Chr8:13005413-13005432 None:intergenic 35.0%
TGCCGCTATTCTTTATGAAT+TGG - Chr8:13008454-13008473 None:intergenic 35.0%
TTAAACACACGAACTCAATG+TGG + Chr8:13008373-13008392 MsG0880042710.01.T01:intron 35.0%
TTATTAGAACTTGACGACCT+AGG - Chr8:13006991-13007010 None:intergenic 35.0%
TTCCTAATGCAATCTCTCAA+AGG - Chr8:13008268-13008287 None:intergenic 35.0%
TTGCTTGAACTGGAATTTGA+AGG - Chr8:13010161-13010180 None:intergenic 35.0%
TTGTCCTGCAAAGCAAAATA+TGG - Chr8:13009196-13009215 None:intergenic 35.0%
TTTCAGAAATTCCATCCAAC+TGG + Chr8:13007782-13007801 MsG0880042710.01.T01:intron 35.0%
TTTGAATGCTTGGGAAAAGT+TGG + Chr8:13005463-13005482 MsG0880042710.01.T01:intron 35.0%
! AATGCAAAGTTTCAGGTGAT+TGG + Chr8:13005337-13005356 MsG0880042710.01.T01:intron 35.0%
! ACTAAAATTGGCTCAGGAAT+CGG - Chr8:13010101-13010120 None:intergenic 35.0%
! AGAGATGTGATATTTTTCCG+TGG - Chr8:13007165-13007184 None:intergenic 35.0%
! AGTTGTGTACAAACTTGTTC+GGG + Chr8:13003066-13003085 MsG0880042710.01.T01:CDS 35.0%
! CAAAAGGACTAGTATGATTG+AGG + Chr8:13009589-13009608 MsG0880042710.01.T01:intron 35.0%
! CACGATTCTTTTGAATGCTT+GGG + Chr8:13005454-13005473 MsG0880042710.01.T01:intron 35.0%
! CAGTTGTGTACAAACTTGTT+CGG + Chr8:13003065-13003084 MsG0880042710.01.T01:CDS 35.0%
! CATGATTTTTCCATGACAGA+TGG + Chr8:13006499-13006518 MsG0880042710.01.T01:CDS 35.0%
! CATTTCTGGAAAGTAACTTG+AGG - Chr8:13009851-13009870 None:intergenic 35.0%
! CTCAATCATACTAGTCCTTT+TGG - Chr8:13009591-13009610 None:intergenic 35.0%
! CTTGAGGGATCTATCTTTTT+AGG - Chr8:13008861-13008880 None:intergenic 35.0%
! GAATCCATATTTTGCTTTGC+AGG + Chr8:13009189-13009208 MsG0880042710.01.T01:intron 35.0%
! GATTAATGGGTGCATAGTTA+TGG + Chr8:13006101-13006120 MsG0880042710.01.T01:intron 35.0%
! GGTGCATAGTTATGGTTTTT+GGG + Chr8:13006109-13006128 MsG0880042710.01.T01:intron 35.0%
! GTATTGCAACTTTTCCATCT+TGG + Chr8:13005861-13005880 MsG0880042710.01.T01:intron 35.0%
! TCACGATTCTTTTGAATGCT+TGG + Chr8:13005453-13005472 MsG0880042710.01.T01:intron 35.0%
! TCCAAATTCCTTGTGTTACT+CGG + Chr8:13007124-13007143 MsG0880042710.01.T01:CDS 35.0%
! TCTGAACAATGCTTTTCACT+TGG + Chr8:13009767-13009786 MsG0880042710.01.T01:intron 35.0%
! TGATATTTTCCAAGTTCCTG+TGG - Chr8:13008240-13008259 None:intergenic 35.0%
! TGATGCTGATAGTGAAATTG+AGG + Chr8:13007856-13007875 MsG0880042710.01.T01:CDS 35.0%
! TTTCACTTGGCATGTTTTGT+GGG + Chr8:13009780-13009799 MsG0880042710.01.T01:intron 35.0%
! TTTTCACTTGGCATGTTTTG+TGG + Chr8:13009779-13009798 MsG0880042710.01.T01:intron 35.0%
! TTTTCTTCCAACTAATACCC+AGG + Chr8:13005273-13005292 MsG0880042710.01.T01:intron 35.0%
!! ATCAGATGTTCGAAGTATTG+AGG + Chr8:13010388-13010407 MsG0880042710.01.T01:three_prime_UTR 35.0%
!! ATTTGTGTGTTGGTGTCTTT+TGG + Chr8:13005068-13005087 MsG0880042710.01.T01:intron 35.0%
!! CCGTGATTTGTACTTTTACT+AGG + Chr8:13004658-13004677 MsG0880042710.01.T01:intron 35.0%
!! GAACTGTTTAAGGTCACTTT+TGG + Chr8:13006562-13006581 MsG0880042710.01.T01:CDS 35.0%
!! TAGAAAAGATGGTGGAATCT+CGG + Chr8:13003253-13003272 MsG0880042710.01.T01:intron 35.0%
!! TGATATGATGTTCAGGTTGA+GGG + Chr8:13004706-13004725 MsG0880042710.01.T01:intron 35.0%
!! TGTTTTTATCCTTGCCCTAT+TGG + Chr8:13007240-13007259 MsG0880042710.01.T01:intron 35.0%
!! TTTCTCTAAAATTGTGGGGT+GGG + Chr8:13009451-13009470 MsG0880042710.01.T01:intron 35.0%
!! TTTGTGTGTTGGTGTCTTTT+GGG + Chr8:13005069-13005088 MsG0880042710.01.T01:intron 35.0%
!!! CCAATCTGGGTTTAGTTTTT+TGG + Chr8:13003959-13003978 MsG0880042710.01.T01:intron 35.0%
!!! CCGGTTTTTCTCTAAAATTG+TGG + Chr8:13009445-13009464 MsG0880042710.01.T01:intron 35.0%
!!! GATTGTTTTTTTAGGATCGG+TGG + Chr8:13003894-13003913 MsG0880042710.01.T01:intron 35.0%
!!! GGAAGTGTTTTCCTTAAACA+GGG - Chr8:13004106-13004125 None:intergenic 35.0%
!!! GTCATTTTGATTTTGTGGGT+TGG + Chr8:13008743-13008762 MsG0880042710.01.T01:intron 35.0%
!!! TCACTTGAGATTTTGGTTGA+TGG + Chr8:13005149-13005168 MsG0880042710.01.T01:intron 35.0%
!!! TGTTTAAGGTCACTTTTGGT+CGG + Chr8:13006566-13006585 MsG0880042710.01.T01:CDS 35.0%
!!! TTTTCTCTAAAATTGTGGGG+TGG + Chr8:13009450-13009469 MsG0880042710.01.T01:intron 35.0%
AAGCAGTATCCGGTAATGAT+TGG + Chr8:13008807-13008826 MsG0880042710.01.T01:CDS 40.0%
AATAACTCTTAACCTGCCAC+AGG + Chr8:13008221-13008240 MsG0880042710.01.T01:intron 40.0%
AATGACATAACTGCATCAGG+GGG + Chr8:13005613-13005632 MsG0880042710.01.T01:intron 40.0%
ACAGCTAATGGTGCAACTAA+TGG + Chr8:13010185-13010204 MsG0880042710.01.T01:CDS 40.0%
ACCAATCGTAGAAAAGATGG+TGG + Chr8:13003245-13003264 MsG0880042710.01.T01:intron 40.0%
ACGATGTGAGTACGAAGAAA+AGG - Chr8:13009039-13009058 None:intergenic 40.0%
AGAAACTTCGCTTGTCATCT+CGG + Chr8:13006245-13006264 MsG0880042710.01.T01:CDS 40.0%
AGAACCTTCTCATTTCTGAC+AGG - Chr8:13006325-13006344 None:intergenic 40.0%
AGACAAGAACATTTACCACC+AGG + Chr8:13007076-13007095 MsG0880042710.01.T01:CDS 40.0%
AGCACCAATCGTAGAAAAGA+TGG + Chr8:13003242-13003261 MsG0880042710.01.T01:intron 40.0%
AGTAACAAAGACAGATTGGG+TGG - Chr8:13003489-13003508 None:intergenic 40.0%
AGTCAAATCACTAGTGGCAA+AGG + Chr8:13003347-13003366 MsG0880042710.01.T01:intron 40.0%
ATAGAATGTGCTTCCTGGAA+TGG - Chr8:13006358-13006377 None:intergenic 40.0%
ATGATTCGTTCTACGATCCT+CGG + Chr8:13004381-13004400 MsG0880042710.01.T01:intron 40.0%
ATGCTATAGAATGTGCTTCC+TGG - Chr8:13006363-13006382 None:intergenic 40.0%
CAACAGAGATGAAGTAATGG+AGG + Chr8:13004747-13004766 MsG0880042710.01.T01:intron 40.0%
CAGTTTGATCTCACTGAAGT+GGG + Chr8:13009292-13009311 MsG0880042710.01.T01:intron 40.0%
CATGGTGCACCTTTGTAATT+TGG + Chr8:13004476-13004495 MsG0880042710.01.T01:intron 40.0%
CATTACTTCATCTCTGTTGC+AGG - Chr8:13004746-13004765 None:intergenic 40.0%
CCAGTTTCAATACCTCAACA+AGG - Chr8:13008962-13008981 None:intergenic 40.0%
CGAACAAGTTTGTACACAAC+TGG - Chr8:13003067-13003086 None:intergenic 40.0%
CGGAAAATATGGCTGTACAA+AGG + Chr8:13006755-13006774 MsG0880042710.01.T01:CDS 40.0%
CTACTGTGAAAGACAAACAG+TGG + Chr8:13006593-13006612 MsG0880042710.01.T01:CDS 40.0%
CTGCAAAAAATTCCCCAATC+TGG + Chr8:13003945-13003964 MsG0880042710.01.T01:intron 40.0%
CTGCAACAGAGATGAAGTAA+TGG + Chr8:13004744-13004763 MsG0880042710.01.T01:intron 40.0%
GAGGATAGTCAAATCACTAG+TGG + Chr8:13003341-13003360 MsG0880042710.01.T01:intron 40.0%
GATGCTGCAAAAGGTTAAAC+AGG + Chr8:13006219-13006238 MsG0880042710.01.T01:intron 40.0%
GGAAACAGTTGTTGGAATTG+AGG + Chr8:13002961-13002980 MsG0880042710.01.T01:CDS 40.0%
GGCCTAAAGACAACATCAAT+AGG - Chr8:13007611-13007630 None:intergenic 40.0%
GTAACAAAGACAGATTGGGT+GGG - Chr8:13003488-13003507 None:intergenic 40.0%
GTCTAAGAGAAACACCTTAG+TGG - Chr8:13004219-13004238 None:intergenic 40.0%
GTGGTAAATGTTCTTGTCTC+TGG - Chr8:13007075-13007094 None:intergenic 40.0%
GTGTATGACAGATGAATTCG+CGG + Chr8:13010060-13010079 MsG0880042710.01.T01:intron 40.0%
GTTCAACAGTTCACATGACA+AGG - Chr8:13009109-13009128 None:intergenic 40.0%
TACAGGTGTTTAGGTAGAGA+TGG + Chr8:13007286-13007305 MsG0880042710.01.T01:intron 40.0%
TAGTAAGGAGAGTAGATCAG+TGG + Chr8:13003319-13003338 MsG0880042710.01.T01:intron 40.0%
TCAGTTGTGCCAATCATTAC+CGG - Chr8:13008819-13008838 None:intergenic 40.0%
TCAGTTTGATCTCACTGAAG+TGG + Chr8:13009291-13009310 MsG0880042710.01.T01:intron 40.0%
TCCTTAAACAGGGTGTGTAT+CGG - Chr8:13004096-13004115 None:intergenic 40.0%
TGAAAGACAAACAGTGGTTG+AGG + Chr8:13006599-13006618 MsG0880042710.01.T01:CDS 40.0%
TGGAACATTCAAGAGACTTC+TGG - Chr8:13007691-13007710 None:intergenic 40.0%
TGTAACCTCTGCGGAAAATA+TGG + Chr8:13006744-13006763 MsG0880042710.01.T01:CDS 40.0%
! ACACGTACTAAAATTGGCTC+AGG - Chr8:13010107-13010126 None:intergenic 40.0%
! ATTTTGCTTTGCAGGACAAG+TGG + Chr8:13009197-13009216 MsG0880042710.01.T01:intron 40.0%
! CACCTTTGAGAGATTGCATT+AGG + Chr8:13008263-13008282 MsG0880042710.01.T01:intron 40.0%
! CCAAATTCCTTGTGTTACTC+GGG + Chr8:13007125-13007144 MsG0880042710.01.T01:CDS 40.0%
! CCATGATTGGGTTGTTTAAG+CGG - Chr8:13009924-13009943 None:intergenic 40.0%
! CTAAAATTGGCTCAGGAATC+GGG - Chr8:13010100-13010119 None:intergenic 40.0%
! GGGTGCATAGTTATGGTTTT+TGG + Chr8:13006108-13006127 MsG0880042710.01.T01:intron 40.0%
! GTTTTGTGTGCTCTATGTGT+GGG + Chr8:13003137-13003156 MsG0880042710.01.T01:intron 40.0%
! TAAAAGTACGGGACACATAC+AGG + Chr8:13007008-13007027 MsG0880042710.01.T01:CDS 40.0%
! TAAAATTGGCTCAGGAATCG+GGG - Chr8:13010099-13010118 None:intergenic 40.0%
! TCCACCATCTTTTCTACGAT+TGG - Chr8:13003249-13003268 None:intergenic 40.0%
! TTTTGTGTGCTCTATGTGTG+GGG + Chr8:13003138-13003157 MsG0880042710.01.T01:intron 40.0%
!! AGCTGTTAACTTGCTTGAAC+TGG - Chr8:13010171-13010190 None:intergenic 40.0%
!! AGTTGCTTCTGAAACAAGAC+TGG + Chr8:13006834-13006853 MsG0880042710.01.T01:CDS 40.0%
!! AGTTTTGTGTGCTCTATGTG+TGG + Chr8:13003136-13003155 MsG0880042710.01.T01:intron 40.0%
!! ATTGTAGGCGTCGAACAATT+TGG - Chr8:13009655-13009674 None:intergenic 40.0%
!! CCTTGTTGAGGTATTGAAAC+TGG + Chr8:13008959-13008978 MsG0880042710.01.T01:CDS 40.0%
!! CTGATATGATGTTCAGGTTG+AGG + Chr8:13004705-13004724 MsG0880042710.01.T01:intron 40.0%
!! GAGGTATTGAAACTGGTTGA+TGG + Chr8:13008966-13008985 MsG0880042710.01.T01:CDS 40.0%
!! GATATGATGTTCAGGTTGAG+GGG + Chr8:13004707-13004726 MsG0880042710.01.T01:intron 40.0%
!! GATTATGATGATGGGAAGCT+TGG + Chr8:13002983-13003002 MsG0880042710.01.T01:CDS 40.0%
!! GTCTTGTTTCAGAAGCAACT+TGG - Chr8:13006834-13006853 None:intergenic 40.0%
!! TAACCAGAGAAAAGCGTCAA+AGG - Chr8:13007565-13007584 None:intergenic 40.0%
!!! GGGAAGTGTTTTCCTTAAAC+AGG - Chr8:13004107-13004126 None:intergenic 40.0%
!!! GTTTAAGGTCACTTTTGGTC+GGG + Chr8:13006567-13006586 MsG0880042710.01.T01:CDS 40.0%
!!! GTTTTTTTAGGATCGGTGGT+AGG + Chr8:13003898-13003917 MsG0880042710.01.T01:intron 40.0%
AAATTCCATCCAACTGGCAC+GGG + Chr8:13007788-13007807 MsG0880042710.01.T01:CDS 45.0%
AACACACGAACTCAATGTGG+TGG + Chr8:13008376-13008395 MsG0880042710.01.T01:intron 45.0%
AAGACAAACAGTGGTTGAGG+AGG + Chr8:13006602-13006621 MsG0880042710.01.T01:CDS 45.0%
AATATTCCCACTGCTAAGGG+TGG + Chr8:13008906-13008925 MsG0880042710.01.T01:CDS 45.0%
AATGATTCAAAAGCCGTGGG+TGG + Chr8:13006790-13006809 MsG0880042710.01.T01:CDS 45.0%
ACAACATTAGAGAGAGAGGC+TGG + Chr8:13003217-13003236 MsG0880042710.01.T01:intron 45.0%
ACAAGCAGCAAAGAAATCCC+TGG - Chr8:13004972-13004991 None:intergenic 45.0%
ACACACGAACTCAATGTGGT+GGG + Chr8:13008377-13008396 MsG0880042710.01.T01:intron 45.0%
ACCACTTTCTATCACTCCTC+CGG - Chr8:13006446-13006465 None:intergenic 45.0%
ACCTGCTACTGCCATTGAAA+CGG + Chr8:13004136-13004155 MsG0880042710.01.T01:intron 45.0%
ACGGTAAGACCAACTAAGCA+TGG + Chr8:13007923-13007942 MsG0880042710.01.T01:CDS 45.0%
ACTGAACCAGACATCAACCA+CGG + Chr8:13009893-13009912 MsG0880042710.01.T01:intron 45.0%
AGCTTGCATCAAGCACCAAT+AGG - Chr8:13007258-13007277 None:intergenic 45.0%
AGGAACTAGCACAGCAACTT+TGG - Chr8:13004243-13004262 None:intergenic 45.0%
AGGTGTTTAGGTAGAGATGG+AGG + Chr8:13007289-13007308 MsG0880042710.01.T01:intron 45.0%
AGTAGATTGCAGGCCAATTC+TGG - Chr8:13003714-13003733 None:intergenic 45.0%
AGTTGTTACGGGACAGTTAC+AGG + Chr8:13009549-13009568 MsG0880042710.01.T01:intron 45.0%
ATACCCAGGCGTTTCACATT+AGG + Chr8:13005287-13005306 MsG0880042710.01.T01:intron 45.0%
ATCAGTTGAACCGTCCAGTT+TGG + Chr8:13009948-13009967 MsG0880042710.01.T01:intron 45.0%
ATGACATAACTGCATCAGGG+GGG + Chr8:13005614-13005633 MsG0880042710.01.T01:intron 45.0%
ATGCTTTGTCTTCACCGAAG+CGG + Chr8:13003032-13003051 MsG0880042710.01.T01:CDS 45.0%
ATGGTGCAACTAATGGTGCA+AGG + Chr8:13010192-13010211 MsG0880042710.01.T01:CDS 45.0%
CAACATTAGAGAGAGAGGCT+GGG + Chr8:13003218-13003237 MsG0880042710.01.T01:intron 45.0%
CAGTTGTGAAAAATCCGCCA+TGG - Chr8:13008425-13008444 None:intergenic 45.0%
CCATGTTTGATTGCATGCCT+AGG + Chr8:13007634-13007653 MsG0880042710.01.T01:intron 45.0%
CCCGAGTAACACAAGGAATT+TGG - Chr8:13007128-13007147 None:intergenic 45.0%
CCGCTTAAACAACCCAATCA+TGG + Chr8:13009921-13009940 MsG0880042710.01.T01:intron 45.0%
CCTAGGCATGCAATCAAACA+TGG - Chr8:13007637-13007656 None:intergenic 45.0%
CCTTAAACAGGGTGTGTATC+GGG - Chr8:13004095-13004114 None:intergenic 45.0%
CGTTAGTAAGCAAGAACCAG+TGG - Chr8:13009814-13009833 None:intergenic 45.0%
CTTCTCCAACATGTTATGCC+GGG + Chr8:13007031-13007050 MsG0880042710.01.T01:CDS 45.0%
GAAATTCCATCCAACTGGCA+CGG + Chr8:13007787-13007806 MsG0880042710.01.T01:intron 45.0%
GACTGCTTCTATCAATCCCA+CGG - Chr8:13003012-13003031 None:intergenic 45.0%
GAGTACCTTGAGATCAACAG+AGG - Chr8:13009063-13009082 None:intergenic 45.0%
GCATCAGAACCATGCTTAGT+TGG - Chr8:13007935-13007954 None:intergenic 45.0%
GCATGCAATCAAACATGGCA+AGG - Chr8:13007632-13007651 None:intergenic 45.0%
GCTTCTCCAACATGTTATGC+CGG + Chr8:13007030-13007049 MsG0880042710.01.T01:CDS 45.0%
GCTTGCATCAAGCACCAATA+GGG - Chr8:13007257-13007276 None:intergenic 45.0%
GTGTTCTCAAATATCGGCCA+TGG + Chr8:13008405-13008424 MsG0880042710.01.T01:intron 45.0%
GTTGTTACGGGACAGTTACA+GGG + Chr8:13009550-13009569 MsG0880042710.01.T01:intron 45.0%
GTTTGAAAGATCGTAACCCG+AGG - Chr8:13004401-13004420 None:intergenic 45.0%
TAAGGAGAGTAGATCAGTGG+AGG + Chr8:13003322-13003341 MsG0880042710.01.T01:intron 45.0%
TCATTTAGCATGTGCTGTGC+TGG + Chr8:13004923-13004942 MsG0880042710.01.T01:intron 45.0%
TCGTACCTCTGTTGATCTCA+AGG + Chr8:13009055-13009074 MsG0880042710.01.T01:CDS 45.0%
TCTGGATAAGCATTCCTAGC+AGG - Chr8:13007057-13007076 None:intergenic 45.0%
TGAAACGCCTGGGTATTAGT+TGG - Chr8:13005283-13005302 None:intergenic 45.0%
TGATTCGTTCTACGATCCTC+GGG + Chr8:13004382-13004401 MsG0880042710.01.T01:intron 45.0%
TGATTGGCACAACTGATCCA+AGG + Chr8:13008823-13008842 MsG0880042710.01.T01:CDS 45.0%
TGCATGCCTAGGAAATGCAT+TGG + Chr8:13007645-13007664 MsG0880042710.01.T01:intron 45.0%
TTAGACTCTCTTGGAGGTTC+TGG + Chr8:13007099-13007118 MsG0880042710.01.T01:CDS 45.0%
TTCTCAAATATCGGCCATGG+CGG + Chr8:13008408-13008427 MsG0880042710.01.T01:intron 45.0%
TTGTTTAAGCGGTTCAACCG+TGG - Chr8:13009913-13009932 None:intergenic 45.0%
! AATCTCGGCTTAGCTGGTTT+GGG + Chr8:13003268-13003287 MsG0880042710.01.T01:intron 45.0%
! AATGGTGCAAGGAGTATGCA+TGG + Chr8:13010203-13010222 MsG0880042710.01.T01:CDS 45.0%
! ACTGGATTGGAAATCCGCTT+CGG - Chr8:13003049-13003068 None:intergenic 45.0%
! AGCGGCACCATGATGTTTTA+TGG + Chr8:13008467-13008486 MsG0880042710.01.T01:intron 45.0%
! ATTTTCCAAGTTCCTGTGGC+AGG - Chr8:13008236-13008255 None:intergenic 45.0%
! CAGGCCAATTCTGGAAGAAA+AGG - Chr8:13003705-13003724 None:intergenic 45.0%
! CATCTTCTGGAAGCTTCGAT+TGG + Chr8:13004852-13004871 MsG0880042710.01.T01:CDS 45.0%
! GGCACCATGATGTTTTATGG+TGG + Chr8:13008470-13008489 MsG0880042710.01.T01:intron 45.0%
! TACAGCCATATTTTCCGCAG+AGG - Chr8:13006752-13006771 None:intergenic 45.0%
! TCTGTCTGAAACTCCATTCC+AGG + Chr8:13006342-13006361 MsG0880042710.01.T01:CDS 45.0%
! TTTATGTTGACGGTTCGGGT+CGG + Chr8:13003998-13004017 MsG0880042710.01.T01:intron 45.0%
! TTTCACATTAGGCACTGCAG+AGG + Chr8:13005298-13005317 MsG0880042710.01.T01:CDS 45.0%
! TTTGTGGGTTGCAAATCCAC+TGG + Chr8:13009795-13009814 MsG0880042710.01.T01:intron 45.0%
!! ACCTTCACAGGCATTGAACT+TGG - Chr8:13007896-13007915 None:intergenic 45.0%
!! AATTAAATAGAAAAAAATAA+AGG - Chr8:13008703-13008722 None:intergenic 5.0%
!! ATAAAAATATTTATAGTATA+TGG + Chr8:13007341-13007360 MsG0880042710.01.T01:intron 5.0%
!! ATTTATTAAGTTATTTATTT+GGG - Chr8:13003569-13003588 None:intergenic 5.0%
!!! TCATTATTTTATTAATAAAT+AGG - Chr8:13005598-13005617 None:intergenic 5.0%
!!! TTTTATTTTAAATTTAAAAC+AGG - Chr8:13004041-13004060 None:intergenic 5.0%
ACAAACAGTGGTTGAGGAGG+AGG + Chr8:13006605-13006624 MsG0880042710.01.T01:CDS 50.0%
ACCACCAGGTTAGACTCTCT+TGG + Chr8:13007090-13007109 MsG0880042710.01.T01:CDS 50.0%
ACCAGGTTAGACTCTCTTGG+AGG + Chr8:13007093-13007112 MsG0880042710.01.T01:CDS 50.0%
ACCGTCTGATGAACCTTCAC+AGG - Chr8:13007908-13007927 None:intergenic 50.0%
ACCTCCAAGAGAGTCTAACC+TGG - Chr8:13007097-13007116 None:intergenic 50.0%
AGTATGCATGGAGACAGAGC+AGG + Chr8:13010215-13010234 MsG0880042710.01.T01:CDS 50.0%
AGTGCCTAATGTGAAACGCC+TGG - Chr8:13005294-13005313 None:intergenic 50.0%
ATAAGCATTCCTAGCAGGCC+CGG - Chr8:13007052-13007071 None:intergenic 50.0%
ATCAACTTCGCAACCACCCA+CGG - Chr8:13006806-13006825 None:intergenic 50.0%
CAAAGCGGAATTGACAGCAG+AGG - Chr8:13006476-13006495 None:intergenic 50.0%
CAGATGAATTCGCGGAAGCA+TGG + Chr8:13010068-13010087 MsG0880042710.01.T01:intron 50.0%
CAGTAGCAGGTGAGGAAGAA+GGG - Chr8:13004127-13004146 None:intergenic 50.0%
CATCAAGCACCAATAGGGCA+AGG - Chr8:13007252-13007271 None:intergenic 50.0%
CCCGATACACACCCTGTTTA+AGG + Chr8:13004092-13004111 MsG0880042710.01.T01:intron 50.0%
CGCAGGAAACAGTGAAACAG+AGG - Chr8:13004192-13004211 None:intergenic 50.0%
CTCATTCCACCCTTAGCAGT+GGG - Chr8:13008915-13008934 None:intergenic 50.0%
CTGATCCAAGGCAGGAATTG+AGG + Chr8:13008835-13008854 MsG0880042710.01.T01:CDS 50.0%
CTTAACCTGCCACAGGAACT+TGG + Chr8:13008228-13008247 MsG0880042710.01.T01:intron 50.0%
CTTTCTATCACTCCTCCGGA+AGG - Chr8:13006442-13006461 None:intergenic 50.0%
GAAATGCGTGTTGCAGACAC+TGG + Chr8:13004797-13004816 MsG0880042710.01.T01:CDS 50.0%
GAATCTCGGCTTAGCTGGTT+TGG + Chr8:13003267-13003286 MsG0880042710.01.T01:intron 50.0%
GATCAGTGTTCCAGACCTTC+CGG + Chr8:13006424-13006443 MsG0880042710.01.T01:CDS 50.0%
GCCAAGTTCAATGCCTGTGA+AGG + Chr8:13007892-13007911 MsG0880042710.01.T01:CDS 50.0%
GCCTGTGAAGGTTCATCAGA+CGG + Chr8:13007904-13007923 MsG0880042710.01.T01:CDS 50.0%
GTACATGCCGTGGAATGTGT+TGG + Chr8:13009350-13009369 MsG0880042710.01.T01:intron 50.0%
GTATGCATGGAGACAGAGCA+GGG + Chr8:13010216-13010235 MsG0880042710.01.T01:CDS 50.0%
GTGCCTAATGTGAAACGCCT+GGG - Chr8:13005293-13005312 None:intergenic 50.0%
GTGTCTTCTTGTACATGCCG+TGG + Chr8:13009340-13009359 MsG0880042710.01.T01:intron 50.0%
TCCAAGAGAGTCTAACCTGG+TGG - Chr8:13007094-13007113 None:intergenic 50.0%
TCCGGAGGAGTGATAGAAAG+TGG + Chr8:13006442-13006461 MsG0880042710.01.T01:CDS 50.0%
TGAAACAGAGGTCATGCCAC+CGG - Chr8:13004180-13004199 None:intergenic 50.0%
TGCAGACACTGGACAGAGTA+TGG + Chr8:13004808-13004827 MsG0880042710.01.T01:CDS 50.0%
TTAGGCCTCAATTCCTGCCT+TGG - Chr8:13008843-13008862 None:intergenic 50.0%
TTCAATGGCAGTAGCAGGTG+AGG - Chr8:13004135-13004154 None:intergenic 50.0%
TTGCTTTGCAGGACAAGTGG+AGG + Chr8:13009200-13009219 MsG0880042710.01.T01:intron 50.0%
! CGACCTTTGACGCTTTTCTC+TGG + Chr8:13007559-13007578 MsG0880042710.01.T01:intron 50.0%
! CGGATTTTTCACAACTGCCG+TGG + Chr8:13008428-13008447 MsG0880042710.01.T01:intron 50.0%
! GAAGCTTCGATTGGAGTGCT+CGG + Chr8:13004861-13004880 MsG0880042710.01.T01:CDS 50.0%
! GACTTCTGGAAAGACACAGC+AGG - Chr8:13007677-13007696 None:intergenic 50.0%
! GGAGGTGGTCTGAGATCAAA+CGG + Chr8:13009009-13009028 MsG0880042710.01.T01:CDS 50.0%
! GTTCAACCGTGGTTGATGTC+TGG - Chr8:13009902-13009921 None:intergenic 50.0%
! TTATGTTGACGGTTCGGGTC+GGG + Chr8:13003999-13004018 MsG0880042710.01.T01:intron 50.0%
!! AACTGGTTGATGGTGTGTCG+CGG + Chr8:13008976-13008995 MsG0880042710.01.T01:CDS 50.0%
!! TGATGTTCAGGTTGAGGGGA+TGG + Chr8:13004711-13004730 MsG0880042710.01.T01:intron 50.0%
!!! GCGTCGTCGCTTTGTTTTTC+CGG + Chr8:13004158-13004177 MsG0880042710.01.T01:intron 50.0%
!!! TCGTCGCTTTGTTTTTCCGG+TGG + Chr8:13004161-13004180 MsG0880042710.01.T01:intron 50.0%
AACACCTTAGTGGCAGACGC+AGG - Chr8:13004209-13004228 None:intergenic 55.0%
AAGCGACGACGCCGTTTCAA+TGG - Chr8:13004150-13004169 None:intergenic 55.0%
ACCAACACCTGCTGATGAGG+GGG + Chr8:13009246-13009265 MsG0880042710.01.T01:CDS 55.0%
ACTCTTACCCCCTCATCAGC+AGG - Chr8:13009256-13009275 None:intergenic 55.0%
ATGGGAAGCTTGGAGACCGT+GGG + Chr8:13002993-13003012 MsG0880042710.01.T01:CDS 55.0%
CACCAACACCTGCTGATGAG+GGG + Chr8:13009245-13009264 MsG0880042710.01.T01:CDS 55.0%
CCACTGCTAAGGGTGGAATG+AGG + Chr8:13008913-13008932 MsG0880042710.01.T01:CDS 55.0%
CCCTCAAGTCATGCCACAGA+GGG + Chr8:13008873-13008892 MsG0880042710.01.T01:CDS 55.0%
CCCTCTGTGGCATGACTTGA+GGG - Chr8:13008876-13008895 None:intergenic 55.0%
CCTCATTCCACCCTTAGCAG+TGG - Chr8:13008916-13008935 None:intergenic 55.0%
CTGCTAAGGGTGGAATGAGG+AGG + Chr8:13008916-13008935 MsG0880042710.01.T01:CDS 55.0%
CTTCGCACCCGAGTAACACA+AGG - Chr8:13007135-13007154 None:intergenic 55.0%
GCACCAACACCTGCTGATGA+GGG + Chr8:13009244-13009263 MsG0880042710.01.T01:CDS 55.0%
GCAGTAGCAGGTGAGGAAGA+AGG - Chr8:13004128-13004147 None:intergenic 55.0%
GCCGTTTCAATGGCAGTAGC+AGG - Chr8:13004140-13004159 None:intergenic 55.0%
GGCACTGCAGAGGCAGATTT+GGG + Chr8:13005308-13005327 MsG0880042710.01.T01:CDS 55.0%
GGGTGGGTCAATTTAGACCC+TGG + Chr8:13009467-13009486 MsG0880042710.01.T01:intron 55.0%
GTTTCCTGCGTCTGCCACTA+AGG + Chr8:13004202-13004221 MsG0880042710.01.T01:intron 55.0%
TATCACTCCTCCGGAAGGTC+TGG - Chr8:13006437-13006456 None:intergenic 55.0%
TCCCTCAAGTCATGCCACAG+AGG + Chr8:13008872-13008891 MsG0880042710.01.T01:CDS 55.0%
TCGAGCATGGACCCTTGTTG+AGG + Chr8:13008947-13008966 MsG0880042710.01.T01:CDS 55.0%
TGCACCAACACCTGCTGATG+AGG + Chr8:13009243-13009262 MsG0880042710.01.T01:CDS 55.0%
TGCTGCAGCTGTAACCTCTG+CGG + Chr8:13006735-13006754 MsG0880042710.01.T01:CDS 55.0%
TGGCACAACTGATCCAAGGC+AGG + Chr8:13008827-13008846 MsG0880042710.01.T01:CDS 55.0%
TGGTGGAATCTCGGCTTAGC+TGG + Chr8:13003262-13003281 MsG0880042710.01.T01:intron 55.0%
TTGATCTCAGACCACCTCCC+TGG - Chr8:13009008-13009027 None:intergenic 55.0%
! AATTGGCTCAGGAATCGGGG+CGG - Chr8:13010096-13010115 None:intergenic 55.0%
! AGGCACTGCAGAGGCAGATT+TGG + Chr8:13005307-13005326 MsG0880042710.01.T01:CDS 55.0%
! CTTCGATTGGAGTGCTCGGA+AGG + Chr8:13004865-13004884 MsG0880042710.01.T01:CDS 55.0%
!! GGAGGAAGCATCATCGAGCA+TGG + Chr8:13008934-13008953 MsG0880042710.01.T01:CDS 55.0%
!! TGTTCAGGTTGAGGGGATGG+AGG + Chr8:13004714-13004733 MsG0880042710.01.T01:intron 55.0%
ACCCCCTCATCAGCAGGTGT+TGG - Chr8:13009250-13009269 None:intergenic 60.0%
CAGTGTTCCAGACCTTCCGG+AGG + Chr8:13006427-13006446 MsG0880042710.01.T01:CDS 60.0%
CATGTTATGCCGGGCCTGCT+AGG + Chr8:13007040-13007059 MsG0880042710.01.T01:CDS 60.0%
GATGGGAAGCTTGGAGACCG+TGG + Chr8:13002992-13003011 MsG0880042710.01.T01:CDS 60.0%
GCAGGCCCGGCATAACATGT+TGG - Chr8:13007039-13007058 None:intergenic 60.0%
GCCCTCTGTGGCATGACTTG+AGG - Chr8:13008877-13008896 None:intergenic 60.0%
GGGTGCGAAGAAGTCGTCCA+CGG + Chr8:13007145-13007164 MsG0880042710.01.T01:CDS 60.0%
!! GTTGATGGTGTGTCGCGGTG+TGG + Chr8:13008981-13009000 MsG0880042710.01.T01:CDS 60.0%
ACGGGCGAGGCTGCAAAGTC+AGG + Chr8:13007806-13007825 MsG0880042710.01.T01:CDS 65.0%
GTGTGTCGCGGTGTGGACCA+GGG + Chr8:13008988-13009007 MsG0880042710.01.T01:CDS 65.0%
CCATCCAACTGGCACGGGCG+AGG + Chr8:13007793-13007812 MsG0880042710.01.T01:CDS 70.0%
CCTCGCCCGTGCCAGTTGGA+TGG - Chr8:13007796-13007815 None:intergenic 70.0%
GGTGTGTCGCGGTGTGGACC+AGG + Chr8:13008987-13009006 MsG0880042710.01.T01:CDS 70.0%
TGTCGCGGTGTGGACCAGGG+AGG + Chr8:13008991-13009010 MsG0880042710.01.T01:CDS 70.0%
CGCGGTGTGGACCAGGGAGG+TGG + Chr8:13008994-13009013 MsG0880042710.01.T01:CDS 75.0%
GCAGCCTCGCCCGTGCCAGT+TGG - Chr8:13007800-13007819 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 13002959 13010453 13002959 ID=MsG0880042710.01;Name=MsG0880042710.01
Chr8 mRNA 13002959 13010453 13002959 ID=MsG0880042710.01.T01;Parent=MsG0880042710.01;Name=MsG0880042710.01.T01;_AED=0.35;_eAED=0.35;_QI=0|0.85|0.75|1|0.57|0.62|8|206|672
Chr8 exon 13002959 13003098 13002959 ID=MsG0880042710.01.T01:exon:13329;Parent=MsG0880042710.01.T01
Chr8 exon 13004796 13004886 13004796 ID=MsG0880042710.01.T01:exon:13330;Parent=MsG0880042710.01.T01
Chr8 exon 13005295 13005351 13005295 ID=MsG0880042710.01.T01:exon:13331;Parent=MsG0880042710.01.T01
Chr8 exon 13006220 13007188 13006220 ID=MsG0880042710.01.T01:exon:13332;Parent=MsG0880042710.01.T01
Chr8 exon 13007788 13008018 13007788 ID=MsG0880042710.01.T01:exon:13333;Parent=MsG0880042710.01.T01
Chr8 exon 13008780 13009076 13008780 ID=MsG0880042710.01.T01:exon:13334;Parent=MsG0880042710.01.T01
Chr8 exon 13009211 13009267 13009211 ID=MsG0880042710.01.T01:exon:13335;Parent=MsG0880042710.01.T01
Chr8 exon 13010071 13010453 13010071 ID=MsG0880042710.01.T01:exon:13336;Parent=MsG0880042710.01.T01
Chr8 CDS 13002959 13003098 13002959 ID=MsG0880042710.01.T01:cds;Parent=MsG0880042710.01.T01
Chr8 CDS 13004796 13004886 13004796 ID=MsG0880042710.01.T01:cds;Parent=MsG0880042710.01.T01
Chr8 CDS 13005295 13005351 13005295 ID=MsG0880042710.01.T01:cds;Parent=MsG0880042710.01.T01
Chr8 CDS 13006220 13007188 13006220 ID=MsG0880042710.01.T01:cds;Parent=MsG0880042710.01.T01
Chr8 CDS 13007788 13008018 13007788 ID=MsG0880042710.01.T01:cds;Parent=MsG0880042710.01.T01
Chr8 CDS 13008780 13009076 13008780 ID=MsG0880042710.01.T01:cds;Parent=MsG0880042710.01.T01
Chr8 CDS 13009211 13009267 13009211 ID=MsG0880042710.01.T01:cds;Parent=MsG0880042710.01.T01
Chr8 CDS 13010071 13010247 13010071 ID=MsG0880042710.01.T01:cds;Parent=MsG0880042710.01.T01
Chr8 three_prime_UTR 13010248 13010453 13010248 ID=MsG0880042710.01.T01:three_prime_utr;Parent=MsG0880042710.01.T01
Gene Sequence

>MsG0880042710.01.T01

ATGGAAACAGTTGTTGGAATTGAGGATTATGATGATGGGAAGCTTGGAGACCGTGGGATTGATAGAAGCAGTCATGCTTTGTCTTCACCGAAGCGGATTTCCAATCCAGTTGTGTACAAACTTGTTCGGGTATATATCTATGAAATGCGTGTTGCAGACACTGGACAGAGTATGGAATGCATATCAATCGAAAGATCATCTTCTGGAAGCTTCGATTGGAGTGCTCGGAAGGCGTTTCACATTAGGCACTGCAGAGGCAGATTTGGGAAGCTAAATGCAAAGTTTCAGATGCTGCAAAAGGTTAAACAGGAAGAGAAACTTCGCTTGTCATCTCGGTCACCTGTTCATTCTCATGTACAAATAGATAGCCAGTGTTCTGCTGATAAATTTCCTGTCAGAAATGAGAAGGTTCTGTCTGAAACTCCATTCCAGGAAGCACATTCTATAGCATCAAGTTTAAATTATAGTCTTAGTAATCAATCTGGGAGTATCGATCAGTGTTCCAGACCTTCCGGAGGAGTGATAGAAAGTGGTTCATCTGCCTCTGCTGTCAATTCCGCTTTGAAGCATGATTTTTCCATGACAGATGGAGAAATATGTTTGGATAAGTTGTCGATCAAAGAACTTCATGAACTGTTTAAGGTCACTTTTGGTCGGGAAACTACTGTGAAAGACAAACAGTGGTTGAGGAGGAGGATTGCTATGAGTTTAACTAACTCATGCGATGTTTCAGCAACAACATTCACTGTTAAAGATAACAAAATAACTAGAAAATTTGAAGAAGAATGTTCTAGAAATGTGAATGCTGCAGCTGTAACCTCTGCGGAAAATATGGCTGTACAAAGGGATATCAAGTATAATGATTCAAAAGCCGTGGGTGGTTGCGAAGTTGATAATAACCAAGTTGCTTCTGAAACAAGACTGGAAAATCTTAATATGGAACATGAATTAGAAGATGAGGATCAGCTGAGAGAACAAAGAGCTGCGAAAAGAATGCGTAAGCCCACTAAGCGATATATTGAAGAGCTCTCTGAAAATGAATCTAGAGAGCAAATTCCTAGGTCGTCAAGTTCTAATAAAAGTACGGGACACATACAGGCTTCTCCAACATGTTATGCCGGGCCTGCTAGGAATGCTTATCCAGAGACAAGAACATTTACCACCAGGTTAGACTCTCTTGGAGGTTCTGGTTTCCAAATTCCTTGTGTTACTCGGGTGCGAAGAAGTCGTCCACGGAAAAATATCACATCTCTTATGAAATTCCATCCAACTGGCACGGGCGAGGCTGCAAAGTCAGGCAATAAAGTCGTTAGCAATCATGGTTCTGATGCTGATAGTGAAATTGAGGACAAATTCATAAAGCCAAGTTCAATGCCTGTGAAGGTTCATCAGACGGTAAGACCAACTAAGCATGGTTCTGATGCTGATAGTGAAATTGAGGACAAATTCATAAAGCCAAGTTCAATGCCTGTGAAGGTTCATCAGACGTCTACTTCTGAGTCTAAGAAAGATAAGAAGCAGTATCCGGTAATGATTGGCACAACTGATCCAAGGCAGGAATTGAGGCCTAAAAAGATAGATCCCTCAAGTCATGCCACAGAGGGCAATATAGTTAATATTCCCACTGCTAAGGGTGGAATGAGGAGGAAGCATCATCGAGCATGGACCCTTGTTGAGGTATTGAAACTGGTTGATGGTGTGTCGCGGTGTGGACCAGGGAGGTGGTCTGAGATCAAACGGCTCTCCTTTTCTTCGTACTCACATCGTACCTCTGTTGATCTCAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTTGCACCAACACCTGCTGATGAGGGGATGAATTCGCGGAAGCATGGTTCCGCCCCGATTCCTGAGCCAATTTTAGTACGTGTGAGAGAGCTAGCAGAGATAAATTCTCAAGTACCTTCAAATTCCAGTTCAAGCAAGTTAACAGCTAATGGTGCAACTAATGGTGCAAGGAGTATGCATGGAGACAGAGCAGGGTACTTGTAG
Protein sequence

>MsG0880042710.01.T01

METVVGIEDYDDGKLGDRGIDRSSHALSSPKRISNPVVYKLVRVYIYEMRVADTGQSMECISIERSSSGSFDWSARKAFHIRHCRGRFGKLNAKFQMLQKVKQEEKLRLSSRSPVHSHVQIDSQCSADKFPVRNEKVLSETPFQEAHSIASSLNYSLSNQSGSIDQCSRPSGGVIESGSSASAVNSALKHDFSMTDGEICLDKLSIKELHELFKVTFGRETTVKDKQWLRRRIAMSLTNSCDVSATTFTVKDNKITRKFEEECSRNVNAAAVTSAENMAVQRDIKYNDSKAVGGCEVDNNQVASETRLENLNMEHELEDEDQLREQRAAKRMRKPTKRYIEELSENESREQIPRSSSSNKSTGHIQASPTCYAGPARNAYPETRTFTTRLDSLGGSGFQIPCVTRVRRSRPRKNITSLMKFHPTGTGEAAKSGNKVVSNHGSDADSEIEDKFIKPSSMPVKVHQTVRPTKHGSDADSEIEDKFIKPSSMPVKVHQTSTSESKKDKKQYPVMIGTTDPRQELRPKKIDPSSHATEGNIVNIPTAKGGMRRKHHRAWTLVEVLKLVDGVSRCGPGRWSEIKRLSFSSYSHRTSVDLKDKWRNLLKASFAPTPADEGMNSRKHGSAPIPEPILVRVRELAEINSQVPSNSSSSKLTANGATNGARSMHGDRAGYL*