AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014675.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014675.01.T01 MTR_3g462290 91.706 422 5 1 67 458 913 1334 0.0 780
MsG0380014675.01.T01 MTR_8g101340 33.574 277 179 3 183 455 709 984 2.59e-45 169
MsG0380014675.01.T01 MTR_7g080730 29.315 365 245 7 95 455 628 983 2.64e-34 137
MsG0380014675.01.T01 MTR_5g069360 28.975 283 184 3 184 455 691 967 2.32e-32 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014675.01.T01 AT3G46960 66.587 416 106 2 73 458 798 1210 0.0 558
MsG0380014675.01.T01 AT3G46960 66.587 416 106 2 73 458 807 1219 0.0 558
MsG0380014675.01.T01 AT3G46960 66.587 416 106 2 73 458 935 1347 0.0 557
MsG0380014675.01.T01 AT2G06990 33.798 287 176 5 176 455 716 995 3.41e-42 160
MsG0380014675.01.T01 AT1G59760 32.959 267 177 2 190 455 723 988 1.43e-33 135

Find 105 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAACAGATGCCAGACTTTC+AGG 0.150910 3:-58301674 MsG0380014675.01.T01:CDS
TACACCCATTGCACTGATTC+TGG 0.167987 3:+58301791 None:intergenic
ACAAGACCACGTCTTGATTT+TGG 0.186590 3:+58302813 None:intergenic
GCATACTCTTCAGGGCTTAT+TGG 0.245640 3:+58301079 None:intergenic
GCAGCTAGCTTGTATATTAC+TGG 0.266217 3:-58300727 MsG0380014675.01.T01:CDS
GGACATCTTCTCCAATAATT+TGG 0.268343 3:+58301813 None:intergenic
GTTGCTTGTGAAATGAATTC+TGG 0.293023 3:-58301476 MsG0380014675.01.T01:CDS
CCGTAAGTGGACCAAATTAT+TGG 0.300704 3:-58301824 MsG0380014675.01.T01:CDS
GTGCAATGGGTGTATAAAAT+TGG 0.303934 3:-58301782 MsG0380014675.01.T01:CDS
ATAGATGTTCTAAAGGAAAT+TGG 0.304296 3:-58301539 MsG0380014675.01.T01:CDS
GCCCAAGAAAATCTCAAATT+TGG 0.310193 3:-58301058 MsG0380014675.01.T01:CDS
CATACTCTTCAGGGCTTATT+GGG 0.310655 3:+58301080 None:intergenic
ACGATTGCAAGTCACGAATC+TGG 0.323501 3:+58305239 None:intergenic
TCACCGCAAGCAAGTGGTCC+TGG 0.363397 3:+58302979 None:intergenic
GTTCTTACTATCAAGCCTTC+AGG 0.377920 3:+58300871 None:intergenic
CCGTGATTCCACCATCCATT+TGG 0.408184 3:+58305180 None:intergenic
TTTCTTGGGCATACTCTTCA+GGG 0.409673 3:+58301071 None:intergenic
CTGGTTCCAGTTCATCAAGC+TGG 0.409777 3:+58301417 None:intergenic
CACGGTGGACGGGTTGTAAT+CGG 0.410320 3:-58305162 MsG0380014675.01.T01:CDS
ACACCCATTGCACTGATTCT+GGG 0.416007 3:+58301792 None:intergenic
CCAATAATTTGGTCCACTTA+CGG 0.423444 3:+58301824 None:intergenic
TATACCCGGCCCTGAAAGTC+TGG 0.425375 3:+58301664 None:intergenic
CGTTGAAGTGGTTTATGAAT+GGG 0.434788 3:-58301032 MsG0380014675.01.T01:CDS
TGAGAACCAGCTTGATGAAC+TGG 0.434895 3:-58301423 MsG0380014675.01.T01:CDS
ATCTGGGATGTTCGTGAACC+TGG 0.436259 3:+58305256 None:intergenic
ATTAACGCCACTACTTCTTC+TGG 0.438402 3:+58301398 None:intergenic
ACAATGTACAGTTTATTACT+TGG 0.439527 3:+58302939 None:intergenic
TTCCATCGGATTTCAAATCC+TGG 0.447203 3:+58302575 None:intergenic
TACATCTGTTTCTGCTCGTA+AGG 0.447642 3:-58302778 MsG0380014675.01.T01:CDS
CGATTGCAAGTCACGAATCT+GGG 0.453959 3:+58305240 None:intergenic
TCGTTGAAGTGGTTTATGAA+TGG 0.456779 3:-58301033 MsG0380014675.01.T01:CDS
GCTCAGATGCATTCTTCTGC+TGG 0.479455 3:+58301360 None:intergenic
TTGTGGAAACATACCGTAAG+TGG 0.482004 3:-58301837 MsG0380014675.01.T01:CDS
TCACGCCGATCTTTATGTCT+CGG 0.482983 3:+58305211 None:intergenic
TCTCCAGATAGATGTTCTAA+AGG 0.487620 3:-58301546 MsG0380014675.01.T01:intron
TGATAGTAAGAACCATTGTC+AGG 0.489218 3:-58300861 MsG0380014675.01.T01:CDS
TCCACAGGCAGAACCGCGAT+GGG 0.496560 3:+58302728 None:intergenic
TGTCCCAGAATCAGTGCAAT+GGG 0.497217 3:-58301795 MsG0380014675.01.T01:CDS
CAACAGATGCCAGACTTTCA+GGG 0.503547 3:-58301673 MsG0380014675.01.T01:CDS
TTGCTTGTGAAATGAATTCT+GGG 0.506000 3:-58301475 MsG0380014675.01.T01:CDS
CACCGCAAGCAAGTGGTCCT+GGG 0.507586 3:+58302980 None:intergenic
AACTTCGGAGGGAGGAATCA+AGG 0.508166 3:-58305115 MsG0380014675.01.T01:CDS
CTCCAGGATTTGAAATCCGA+TGG 0.511409 3:-58302577 MsG0380014675.01.T01:CDS
CAAATTTGGTCTCGTTGAAG+TGG 0.512752 3:-58301044 MsG0380014675.01.T01:CDS
AAATAAGTATCCTCCAGCTC+TGG 0.514627 3:-58302554 MsG0380014675.01.T01:CDS
GTATCCTCCAGCTCTGGATC+CGG 0.515289 3:-58302548 MsG0380014675.01.T01:CDS
TACAGTTTATTACTTGGAGA+AGG 0.516351 3:+58302945 None:intergenic
GATGGTGGAATCACGGTGGA+CGG 0.516607 3:-58305173 MsG0380014675.01.T01:CDS
TCCACTGGGAATGACATGTC+AGG 0.517066 3:+58302903 None:intergenic
ATGGTGGAATCACGGTGGAC+GGG 0.518952 3:-58305172 MsG0380014675.01.T01:CDS
CTTCGAATTGCCACCACTTG+AGG 0.522816 3:+58302875 None:intergenic
GATGCCAGACTTTCAGGGCC+GGG 0.531810 3:-58301668 MsG0380014675.01.T01:intron
CATCCGACATTTGATACTGA+AGG 0.531983 3:+58301704 None:intergenic
AAAGACTGTTAAGTTGCTCC+AGG 0.534890 3:-58302593 MsG0380014675.01.T01:CDS
CCTTTCACCGGATCCAGAGC+TGG 0.536391 3:+58302541 None:intergenic
TTCCACAGGCAGAACCGCGA+TGG 0.536589 3:+58302727 None:intergenic
AGTTCACATATGTCAGCAAA+CGG 0.549615 3:+58300904 None:intergenic
GTTTCTGCTCGTAAGGGAAG+AGG 0.553718 3:-58302771 MsG0380014675.01.T01:CDS
AGTAAGAACCATTGTCAGGT+TGG 0.554747 3:-58300857 MsG0380014675.01.T01:CDS
CCAGCTCTGGATCCGGTGAA+AGG 0.555398 3:-58302541 MsG0380014675.01.T01:intron
TGGAGGATACTTATTTCCAT+CGG 0.557475 3:+58302561 None:intergenic
CTTTGCGGTGGAGTGAACTT+CGG 0.565574 3:-58305130 MsG0380014675.01.T01:CDS
TGCGGTGGAGTGAACTTCGG+AGG 0.567973 3:-58305127 MsG0380014675.01.T01:CDS
GTTGAGAGAGGCGAAACTTG+TGG 0.574439 3:-58301854 MsG0380014675.01.T01:CDS
ACATAAAGATCGGCGTGACG+AGG 0.574754 3:-58305206 MsG0380014675.01.T01:CDS
AGATGCCAGACTTTCAGGGC+CGG 0.575175 3:-58301669 MsG0380014675.01.T01:CDS
TATAGATCTAAAGTTGAGAG+AGG 0.576181 3:-58301866 MsG0380014675.01.T01:intron
CCAAATGGATGGTGGAATCA+CGG 0.577250 3:-58305180 MsG0380014675.01.T01:CDS
ATGTCCCAGAATCAGTGCAA+TGG 0.577836 3:-58301796 MsG0380014675.01.T01:CDS
GACCTCGTAGTTCAAATGAA+AGG 0.581857 3:-58301503 MsG0380014675.01.T01:CDS
CTCAAGTGGTGGCAATTCGA+AGG 0.582948 3:-58302874 MsG0380014675.01.T01:CDS
GCGGTGGAGTGAACTTCGGA+GGG 0.583775 3:-58305126 MsG0380014675.01.T01:CDS
GGCGTGACGAGGATTCCAAA+TGG 0.585492 3:-58305195 MsG0380014675.01.T01:CDS
AGTGGTTTATGAATGGGCAA+AGG 0.588076 3:-58301026 MsG0380014675.01.T01:intron
ATCCGACATTTGATACTGAA+GGG 0.594336 3:+58301705 None:intergenic
ACATCTGTTTCTGCTCGTAA+GGG 0.594449 3:-58302777 MsG0380014675.01.T01:CDS
TGACGAGGATTCCAAATGGA+TGG 0.595785 3:-58305191 MsG0380014675.01.T01:CDS
AATCGGTGGAGTGAACTTTG+CGG 0.596347 3:-58305145 MsG0380014675.01.T01:CDS
TTCCCTTCAGTATCAAATGT+CGG 0.596642 3:-58301707 MsG0380014675.01.T01:CDS
TCACAATCACCGCAAGCAAG+TGG 0.597242 3:+58302973 None:intergenic
CGAAGCCGAGACATAAAGAT+CGG 0.602549 3:-58305216 MsG0380014675.01.T01:CDS
GGCCCAGGACCACTTGCTTG+CGG 0.606336 3:-58302982 MsG0380014675.01.T01:CDS
GGTGGACGGGTTGTAATCGG+TGG 0.608106 3:-58305159 MsG0380014675.01.T01:CDS
GTGGAAAATGCCTCAAGTGG+TGG 0.609286 3:-58302885 MsG0380014675.01.T01:CDS
CGAGGATTCCAAATGGATGG+TGG 0.611190 3:-58305188 MsG0380014675.01.T01:CDS
CTGAGCCTTCACTCACACCT+AGG 0.614262 3:-58301343 MsG0380014675.01.T01:CDS
AAAATGGTAATACCTTTCAC+CGG 0.617179 3:+58302529 None:intergenic
GTGGAGTGAACTTCGGAGGG+AGG 0.620354 3:-58305123 MsG0380014675.01.T01:CDS
GACAGCCTAGGTGTGAGTGA+AGG 0.625506 3:+58301338 None:intergenic
AACATTAAATTGCCCCATCG+CGG 0.635627 3:-58302741 MsG0380014675.01.T01:intron
CCAGTGGAAAATGCCTCAAG+TGG 0.637400 3:-58302888 MsG0380014675.01.T01:CDS
CGGTGGAGTGAACTTTGCGG+TGG 0.637664 3:-58305142 MsG0380014675.01.T01:CDS
AAAAGCAGTACATTTGACCA+AGG 0.637927 3:-58302849 MsG0380014675.01.T01:CDS
GAACTTACTGATGTTCCTGA+AGG 0.645176 3:-58300886 MsG0380014675.01.T01:CDS
TACAAAACAGCTATAAGACT+AGG 0.663099 3:-58301127 MsG0380014675.01.T01:CDS
TTCACCGGATCCAGAGCTGG+AGG 0.665596 3:+58302544 None:intergenic
TGTCTCGTCCAACCTGACAA+TGG 0.666776 3:+58300849 None:intergenic
ACCTGACATGTCATTCCCAG+TGG 0.667905 3:-58302904 MsG0380014675.01.T01:CDS
ACTGGAACCAGAAGAAGTAG+TGG 0.669103 3:-58301405 MsG0380014675.01.T01:CDS
TTGTGAAATGAATTCTGGGG+AGG 0.679335 3:-58301471 MsG0380014675.01.T01:CDS
GTAATGCCAAAATCAAGACG+TGG 0.694898 3:-58302819 MsG0380014675.01.T01:CDS
CCACAGGCAGAACCGCGATG+GGG 0.697028 3:+58302729 None:intergenic
GTCCTTTCATTTGAACTACG+AGG 0.699721 3:+58301501 None:intergenic
TGCTTGTGAAATGAATTCTG+GGG 0.753634 3:-58301474 MsG0380014675.01.T01:CDS
AATGGATGGTGGAATCACGG+TGG 0.757430 3:-58305177 MsG0380014675.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGTTATAAAAATAATTAAG+AGG + Chr3:58304673-58304692 None:intergenic 10.0%
!! AGTTATAAAAATAATTAAGA+GGG + Chr3:58304672-58304691 None:intergenic 10.0%
!! CAAGTAAATATTAAAATATT+AGG + Chr3:58302644-58302663 None:intergenic 10.0%
!!! AAGTTTTCAAAATAATAAAA+TGG - Chr3:58303476-58303495 MsG0380014675.01.T01:intron 10.0%
!!! CTAATATTTTAATATTTACT+TGG - Chr3:58302642-58302661 MsG0380014675.01.T01:intron 10.0%
!! AAAATAATAGCAAATCATAT+AGG - Chr3:58301564-58301583 MsG0380014675.01.T01:intron 15.0%
!! AAAATTAAAATTGATCAAGT+TGG - Chr3:58303268-58303287 MsG0380014675.01.T01:intron 15.0%
!! ACTAAAAAAGAATATTAATG+TGG + Chr3:58304279-58304298 None:intergenic 15.0%
!! GTTATAAAAATAATTAAGAG+GGG + Chr3:58304671-58304690 None:intergenic 15.0%
!! TAATTATATGGTCTAATATT+GGG + Chr3:58301249-58301268 None:intergenic 15.0%
!! TAGATCTATAAAAAAGAAAA+AGG + Chr3:58304041-58304060 None:intergenic 15.0%
!! TTAATATCAATAATGTTAAG+TGG - Chr3:58302118-58302137 MsG0380014675.01.T01:intron 15.0%
!! TTATGCTATTAATTACATAT+AGG + Chr3:58302753-58302772 None:intergenic 15.0%
!!! AGATTTTGTTATAAATGATT+CGG + Chr3:58303625-58303644 None:intergenic 15.0%
!!! ATTTTAATATTTACTTGGTT+TGG - Chr3:58302647-58302666 MsG0380014675.01.T01:intron 15.0%
!!! TATATGATTTGCTATTATTT+TGG + Chr3:58301565-58301584 None:intergenic 15.0%
!!! TCATTATAAAATCCATTTTT+TGG - Chr3:58303599-58303618 MsG0380014675.01.T01:intron 15.0%
!! AAGAAGAAAAATAAGTTTCT+TGG + Chr3:58302098-58302117 None:intergenic 20.0%
!! AATTCAAAAACCGAAATTTA+TGG - Chr3:58303744-58303763 MsG0380014675.01.T01:intron 20.0%
!! AGAAGAAAAATAAGTTTCTT+GGG + Chr3:58302097-58302116 None:intergenic 20.0%
!! ATTCAAAAACCGAAATTTAT+GGG - Chr3:58303745-58303764 MsG0380014675.01.T01:intron 20.0%
!! CCTATATTCAAAATTACTTT+AGG - Chr3:58302000-58302019 MsG0380014675.01.T01:intron 20.0%
!! CTATAAAAAAGAAAAAGGAA+AGG + Chr3:58304036-58304055 None:intergenic 20.0%
!! GTAATTATATGGTCTAATAT+TGG + Chr3:58301250-58301269 None:intergenic 20.0%
!! TCAATTCTTAAACCTAAAAA+TGG + Chr3:58303407-58303426 None:intergenic 20.0%
!! TGAAATTGTTAAAATGTACT+AGG + Chr3:58302302-58302321 None:intergenic 20.0%
!!! ACTGAAAATTTTGATTTTGA+GGG - Chr3:58303852-58303871 MsG0380014675.01.T01:intron 20.0%
!!! ATCATACTAAATTTCTTTTG+AGG - Chr3:58303506-58303525 MsG0380014675.01.T01:intron 20.0%
!!! CCTAAAGTAATTTTGAATAT+AGG + Chr3:58302003-58302022 None:intergenic 20.0%
!!! TAACTTTTCATTTTGTTGTA+TGG + Chr3:58301325-58301344 None:intergenic 20.0%
!!! TCATACTAAATTTCTTTTGA+GGG - Chr3:58303507-58303526 MsG0380014675.01.T01:intron 20.0%
! AAAAATTCTGCAGCTATTAT+GGG - Chr3:58305103-58305122 MsG0380014675.01.T01:intron 25.0%
! AAGCGATTAACAAAAAAGAA+TGG - Chr3:58301020-58301039 MsG0380014675.01.T01:intron 25.0%
! AAGCTCATTTAGATAATTTG+AGG - Chr3:58302582-58302601 MsG0380014675.01.T01:CDS 25.0%
! AAGTTTCTTGGGATAATAAT+TGG + Chr3:58302086-58302105 None:intergenic 25.0%
! ACAATGTACAGTTTATTACT+TGG + Chr3:58302981-58303000 None:intergenic 25.0%
! AGCGATTAACAAAAAAGAAT+GGG - Chr3:58301021-58301040 MsG0380014675.01.T01:intron 25.0%
! AGCTCATTTAGATAATTTGA+GGG - Chr3:58302583-58302602 MsG0380014675.01.T01:CDS 25.0%
! GAAAGGAAATTAAGCAATAT+TGG + Chr3:58304019-58304038 None:intergenic 25.0%
! TAACAGAGAGAAAAAAATGA+GGG - Chr3:58300994-58301013 MsG0380014675.01.T01:intron 25.0%
! TGAACATATTAAACTCAAGA+AGG + Chr3:58302823-58302842 None:intergenic 25.0%
! TGTTTCAAGAAAGAGAAAAT+GGG - Chr3:58301107-58301126 MsG0380014675.01.T01:CDS 25.0%
! TTAACAGAGAGAAAAAAATG+AGG - Chr3:58300993-58301012 MsG0380014675.01.T01:intron 25.0%
! TTCAAAAACCGAAATTTATG+GGG - Chr3:58303746-58303765 MsG0380014675.01.T01:intron 25.0%
! TTGTATTGCATAATGACTAT+AGG + Chr3:58301650-58301669 None:intergenic 25.0%
! TTGTTTCAAGAAAGAGAAAA+TGG - Chr3:58301106-58301125 MsG0380014675.01.T01:CDS 25.0%
!!! AACTTTTAATATCGACTTCA+CGG + Chr3:58303229-58303248 None:intergenic 25.0%
!!! AATTAAGCAATATTGGCTTA+AGG + Chr3:58304012-58304031 None:intergenic 25.0%
!!! ACCAAATTTGAGATTTTCTT+GGG + Chr3:58304863-58304882 None:intergenic 25.0%
!!! ATAGATGTTCTAAAGGAAAT+TGG - Chr3:58304378-58304397 MsG0380014675.01.T01:intron 25.0%
!!! CACTGAAAATTTTGATTTTG+AGG - Chr3:58303851-58303870 MsG0380014675.01.T01:intron 25.0%
!!! CACTTGTTATCTATAAAAAG+TGG + Chr3:58303436-58303455 None:intergenic 25.0%
!!! CACTTTTTATAGATAACAAG+TGG - Chr3:58303434-58303453 MsG0380014675.01.T01:intron 25.0%
!!! CTGTTTTAGCAGTAATTTTA+TGG - Chr3:58304325-58304344 MsG0380014675.01.T01:intron 25.0%
!!! TGAAAGGTATTACCATTTTT+AGG - Chr3:58303392-58303411 MsG0380014675.01.T01:intron 25.0%
!!! TGAATTCTATCACTGATTTA+TGG - Chr3:58304948-58304967 MsG0380014675.01.T01:intron 25.0%
!!! TTATTTTGAAAACTTCTCTC+TGG + Chr3:58303471-58303490 None:intergenic 25.0%
!!! TTGCTATTATTTTGGCTATT+CGG + Chr3:58301557-58301576 None:intergenic 25.0%
AAAATGGTAATACCTTTCAC+CGG + Chr3:58303391-58303410 None:intergenic 30.0%
AAAATGTACTAGGCTAAAAG+TGG + Chr3:58302292-58302311 None:intergenic 30.0%
AAATGTACTAGGCTAAAAGT+GGG + Chr3:58302291-58302310 None:intergenic 30.0%
ATAACAAAATCTCTCTCATC+TGG - Chr3:58303633-58303652 MsG0380014675.01.T01:intron 30.0%
ATCACAATTGATTGCTTTAC+AGG - Chr3:58302914-58302933 MsG0380014675.01.T01:CDS 30.0%
ATGAACTTGAGAATAATGCT+TGG + Chr3:58302173-58302192 None:intergenic 30.0%
ATTGCATTTATGACTCATGA+AGG - Chr3:58302471-58302490 MsG0380014675.01.T01:intron 30.0%
CAAAAATTCTGCAGCTATTA+TGG - Chr3:58305102-58305121 MsG0380014675.01.T01:intron 30.0%
CAAGCAGATTTCAAATATAG+TGG + Chr3:58302412-58302431 None:intergenic 30.0%
CTGAAATTCTGATTGGAAAT+TGG - Chr3:58304725-58304744 MsG0380014675.01.T01:intron 30.0%
GAATATTAATGTGGTATACC+CGG + Chr3:58304270-58304289 None:intergenic 30.0%
GCGATTAACAAAAAAGAATG+GGG - Chr3:58301022-58301041 MsG0380014675.01.T01:intron 30.0%
GGATAAATAGGTTAATCAAG+TGG - Chr3:58303774-58303793 MsG0380014675.01.T01:intron 30.0%
GTATGTACACTTTATCACAA+GGG + Chr3:58301785-58301804 None:intergenic 30.0%
GTTGTATGGTGTATATTGTT+GGG + Chr3:58301311-58301330 None:intergenic 30.0%
TACAAAACAGCTATAAGACT+AGG - Chr3:58304790-58304809 MsG0380014675.01.T01:intron 30.0%
TACAGTTTATTACTTGGAGA+AGG + Chr3:58302975-58302994 None:intergenic 30.0%
TCATTTAGATAATTTGAGGG+TGG - Chr3:58302586-58302605 MsG0380014675.01.T01:CDS 30.0%
TGGAAATTGGAATCAACATA+TGG - Chr3:58304738-58304757 MsG0380014675.01.T01:intron 30.0%
TGTTGTATGGTGTATATTGT+TGG + Chr3:58301312-58301331 None:intergenic 30.0%
TTATTGAAGGAAGTTTGTAC+TGG - Chr3:58302525-58302544 MsG0380014675.01.T01:intron 30.0%
TTGCATTTATGACTCATGAA+GGG - Chr3:58302472-58302491 MsG0380014675.01.T01:intron 30.0%
TTGCTTGTGAAATGAATTCT+GGG - Chr3:58304442-58304461 MsG0380014675.01.T01:intron 30.0%
TTGGCATTACAAAAAAACCT+TGG + Chr3:58303088-58303107 None:intergenic 30.0%
TTTCTTGGGATAATAATTGG+AGG + Chr3:58302083-58302102 None:intergenic 30.0%
TTTGTTCCATAGTTTGGAAA+AGG - Chr3:58301880-58301899 MsG0380014675.01.T01:intron 30.0%
! ATTCATCCTTTTCCAAACTA+TGG + Chr3:58301889-58301908 None:intergenic 30.0%
! CACAATTTTGTTCCATAGTT+TGG - Chr3:58301874-58301893 MsG0380014675.01.T01:intron 30.0%
! TAAATGATTCGGCCAAAAAA+TGG + Chr3:58303614-58303633 None:intergenic 30.0%
! TATAGATCTAAAGTTGAGAG+AGG - Chr3:58304051-58304070 MsG0380014675.01.T01:intron 30.0%
! TCAATCAAGAAAGTGTATGA+GGG + Chr3:58301939-58301958 None:intergenic 30.0%
! TTATCTCTTTTGCTAACTTG+AGG + Chr3:58304168-58304187 None:intergenic 30.0%
! TTCAATCAAGAAAGTGTATG+AGG + Chr3:58301940-58301959 None:intergenic 30.0%
! TTTCGGTTTTTGAATTACAG+CGG + Chr3:58303740-58303759 None:intergenic 30.0%
! TTTTAACAATTTCATCGACG+AGG - Chr3:58302308-58302327 MsG0380014675.01.T01:intron 30.0%
!! AAAATGGGTTATTTGTCCAA+AGG - Chr3:58301122-58301141 MsG0380014675.01.T01:CDS 30.0%
!! AGATTTCAAATATAGTGGAC+TGG + Chr3:58302407-58302426 None:intergenic 30.0%
!! CATTGATATTTCTAGAGCTT+AGG - Chr3:58303658-58303677 MsG0380014675.01.T01:intron 30.0%
!! CTGGTTGGTTTGTAATTATA+TGG + Chr3:58301261-58301280 None:intergenic 30.0%
!! GACCAAATTTGAGATTTTCT+TGG + Chr3:58304864-58304883 None:intergenic 30.0%
!! TGTTTCTTGATGATGAAAAC+TGG + Chr3:58301979-58301998 None:intergenic 30.0%
!! TTTCCTTTAGAACATCTATC+TGG + Chr3:58304377-58304396 None:intergenic 30.0%
!!! GAAAATTTTGATTTTGAGGG+TGG - Chr3:58303855-58303874 MsG0380014675.01.T01:intron 30.0%
AAAAGCAGTACATTTGACCA+AGG - Chr3:58303068-58303087 MsG0380014675.01.T01:intron 35.0%
AAGTACATACCCATTAAACC+AGG + Chr3:58302730-58302749 None:intergenic 35.0%
AAGTTCATAATGAGCACACT+TGG - Chr3:58302185-58302204 MsG0380014675.01.T01:intron 35.0%
AATATGGACCCTCACAAAAA+AGG - Chr3:58301162-58301181 MsG0380014675.01.T01:intron 35.0%
AATCCATAACTTCGAATGCA+GGG - Chr3:58304986-58305005 MsG0380014675.01.T01:intron 35.0%
AATTACAAACCAACCAGAGA+TGG - Chr3:58301264-58301283 MsG0380014675.01.T01:intron 35.0%
AGTCGAGCAAAAGTTTATGT+GGG + Chr3:58302338-58302357 None:intergenic 35.0%
AGTTCACATATGTCAGCAAA+CGG + Chr3:58305016-58305035 None:intergenic 35.0%
AGTTTGGAAAAGGATGAATC+TGG - Chr3:58301890-58301909 MsG0380014675.01.T01:intron 35.0%
ATAGCATAAGTCTTGATCCT+TGG - Chr3:58302764-58302783 MsG0380014675.01.T01:CDS 35.0%
ATATGGACCCTCACAAAAAA+GGG - Chr3:58301163-58301182 MsG0380014675.01.T01:intron 35.0%
ATCCGACATTTGATACTGAA+GGG + Chr3:58304215-58304234 None:intergenic 35.0%
ATGGTGTATATTGTTGGGTT+CGG + Chr3:58301306-58301325 None:intergenic 35.0%
ATTTAGTCAATGGGAGCTTA+AGG + Chr3:58302056-58302075 None:intergenic 35.0%
CAAACATTGAGGCATAGATA+AGG - Chr3:58302794-58302813 MsG0380014675.01.T01:CDS 35.0%
CCAATAATTTGGTCCACTTA+CGG + Chr3:58304096-58304115 None:intergenic 35.0%
CGTTGAAGTGGTTTATGAAT+GGG - Chr3:58304885-58304904 MsG0380014675.01.T01:intron 35.0%
CTCCAAAATTCTGAATAAGC+AGG - Chr3:58301705-58301724 MsG0380014675.01.T01:CDS 35.0%
GCCCAAGAAAATCTCAAATT+TGG - Chr3:58304859-58304878 MsG0380014675.01.T01:intron 35.0%
GGACATCTTCTCCAATAATT+TGG + Chr3:58304107-58304126 None:intergenic 35.0%
GGTATGTACACTTTATCACA+AGG + Chr3:58301786-58301805 None:intergenic 35.0%
GGTTATTTGTCCAAAGGAAA+AGG - Chr3:58301128-58301147 MsG0380014675.01.T01:CDS 35.0%
GTATTGTCTAAATGAACTGC+AGG + Chr3:58302034-58302053 None:intergenic 35.0%
GTCGTATGAATTCGGTAATT+GGG - Chr3:58300917-58300936 MsG0380014675.01.T01:intron 35.0%
GTGCAATGGGTGTATAAAAT+TGG - Chr3:58304135-58304154 MsG0380014675.01.T01:intron 35.0%
GTTGCTTGTGAAATGAATTC+TGG - Chr3:58304441-58304460 MsG0380014675.01.T01:intron 35.0%
GTTTGGAAAAGGATGAATCT+GGG - Chr3:58301891-58301910 MsG0380014675.01.T01:intron 35.0%
TAGTCGAGCAAAAGTTTATG+TGG + Chr3:58302339-58302358 None:intergenic 35.0%
TCATATGTGCATATGCTACT+TGG - Chr3:58305303-58305322 MsG0380014675.01.T01:CDS 35.0%
TCCAAGTACCCCATAAATTT+CGG + Chr3:58303757-58303776 None:intergenic 35.0%
TCGTTGAAGTGGTTTATGAA+TGG - Chr3:58304884-58304903 MsG0380014675.01.T01:intron 35.0%
TCGTTGTGCTGAAAAAATCA+CGG - Chr3:58300633-58300652 MsG0380014675.01.T01:three_prime_UTR 35.0%
TCTCCAGATAGATGTTCTAA+AGG - Chr3:58304371-58304390 MsG0380014675.01.T01:intron 35.0%
TGAAACAAAGTGCAGTTGAA+GGG + Chr3:58301094-58301113 None:intergenic 35.0%
TGATAGTAAGAACCATTGTC+AGG - Chr3:58305056-58305075 MsG0380014675.01.T01:intron 35.0%
TGCTTGTGAAATGAATTCTG+GGG - Chr3:58304443-58304462 MsG0380014675.01.T01:intron 35.0%
TGGAGGATACTTATTTCCAT+CGG + Chr3:58303359-58303378 None:intergenic 35.0%
TGTCGTATGAATTCGGTAAT+TGG - Chr3:58300916-58300935 MsG0380014675.01.T01:intron 35.0%
TGTGGAAAAGATTGTAGAAG+TGG + Chr3:58301494-58301513 None:intergenic 35.0%
TTATACTAAGTGCTTACGTG+AGG - Chr3:58303951-58303970 MsG0380014675.01.T01:intron 35.0%
TTATAGAATTGCTCCATCTC+TGG + Chr3:58301280-58301299 None:intergenic 35.0%
TTCCCTTCAGTATCAAATGT+CGG - Chr3:58304210-58304229 MsG0380014675.01.T01:intron 35.0%
TTGAAACAAAGTGCAGTTGA+AGG + Chr3:58301095-58301114 None:intergenic 35.0%
TTGGGATAATAATTGGAGGA+GGG + Chr3:58302079-58302098 None:intergenic 35.0%
TTGGTCCTTAACAAACATTG+AGG - Chr3:58302783-58302802 MsG0380014675.01.T01:CDS 35.0%
! AAAGGTGCAAGTTGCTAATA+TGG - Chr3:58301146-58301165 MsG0380014675.01.T01:intron 35.0%
! AGAGTGCTCAAAAGCAAATA+TGG + Chr3:58301807-58301826 None:intergenic 35.0%
! CAATCAAGAAAGTGTATGAG+GGG + Chr3:58301938-58301957 None:intergenic 35.0%
! CTATGCCTCAATGTTTGTTA+AGG + Chr3:58302791-58302810 None:intergenic 35.0%
! CTGCTTATTCAGAATTTTGG+AGG + Chr3:58301707-58301726 None:intergenic 35.0%
! GCAAAAGCTTCTAAAAGTGA+TGG + Chr3:58303536-58303555 None:intergenic 35.0%
! GTCCTGCTTATTCAGAATTT+TGG + Chr3:58301710-58301729 None:intergenic 35.0%
! TACAATCTTTTCCACATCCA+AGG - Chr3:58301498-58301517 MsG0380014675.01.T01:CDS 35.0%
! TATGGGGTACTTGGATAAAT+AGG - Chr3:58303762-58303781 MsG0380014675.01.T01:intron 35.0%
! TCAATGTTTGTTAAGGACCA+AGG + Chr3:58302784-58302803 None:intergenic 35.0%
! TCATCATCGATTACAGATGA+AGG - Chr3:58302432-58302451 MsG0380014675.01.T01:intron 35.0%
! TGATGATGAAAACTGGATCA+AGG + Chr3:58301972-58301991 None:intergenic 35.0%
! TTCGGTTTTTGAATTACAGC+GGG + Chr3:58303739-58303758 None:intergenic 35.0%
!! CTAGGCTAAAAGTGTTAAGT+CGG + Chr3:58302243-58302262 None:intergenic 35.0%
!! TCACTTTTAGAAGCTTTTGC+AGG - Chr3:58303536-58303555 MsG0380014675.01.T01:intron 35.0%
!! TTGGGTGTTATTGTTGTACT+AGG + Chr3:58302261-58302280 None:intergenic 35.0%
!! TTTTAGAAGCTTTTGCAGGA+GGG - Chr3:58303540-58303559 MsG0380014675.01.T01:intron 35.0%
!!! AACAGGTTTTGTTAGGAGAT+GGG + Chr3:58301838-58301857 None:intergenic 35.0%
!!! CTATTATTTTGGCTATTCGG+TGG + Chr3:58301554-58301573 None:intergenic 35.0%
!!! TAACAGGTTTTGTTAGGAGA+TGG + Chr3:58301839-58301858 None:intergenic 35.0%
AAAAGGATGAATCTGGGTTG+AGG - Chr3:58301897-58301916 MsG0380014675.01.T01:intron 40.0%
AAATAAGTATCCTCCAGCTC+TGG - Chr3:58303363-58303382 MsG0380014675.01.T01:intron 40.0%
AACATTAAATTGCCCCATCG+CGG - Chr3:58303176-58303195 MsG0380014675.01.T01:intron 40.0%
AAGCACCAACTAATGTGTCA+AGG + Chr3:58302887-58302906 None:intergenic 40.0%
AATCAGAATTTCAGAGACGC+GGG + Chr3:58304719-58304738 None:intergenic 40.0%
AATTCGGTAATTGGGAGAGT+GGG - Chr3:58300925-58300944 MsG0380014675.01.T01:intron 40.0%
ACGTCAAAAAAACAAGCAGC+AGG - Chr3:58301394-58301413 MsG0380014675.01.T01:CDS 40.0%
ACTAGGCTAAAAGTGGGATA+AGG + Chr3:58302285-58302304 None:intergenic 40.0%
AGGAGTCACTTACAGTTTCA+GGG + Chr3:58301630-58301649 None:intergenic 40.0%
AGTAAGAACCATTGTCAGGT+TGG - Chr3:58305060-58305079 MsG0380014675.01.T01:intron 40.0%
AGTGGTTTATGAATGGGCAA+AGG - Chr3:58304891-58304910 MsG0380014675.01.T01:intron 40.0%
ATGGAACAAAATTGTGCCTC+TGG + Chr3:58301870-58301889 None:intergenic 40.0%
ATGTCTCAACTCTAAGTGGT+TGG + Chr3:58301682-58301701 None:intergenic 40.0%
ATTAACGCCACTACTTCTTC+TGG + Chr3:58304522-58304541 None:intergenic 40.0%
CAAAACTGAAAGCTTCTAGG+TGG + Chr3:58301471-58301490 None:intergenic 40.0%
CAAAGAGGTCCTGGTTTAAT+GGG - Chr3:58302718-58302737 MsG0380014675.01.T01:intron 40.0%
CAAATTTGGTCTCGTTGAAG+TGG - Chr3:58304873-58304892 MsG0380014675.01.T01:intron 40.0%
CAATCAGAATTTCAGAGACG+CGG + Chr3:58304720-58304739 None:intergenic 40.0%
CAATCCATAACTTCGAATGC+AGG - Chr3:58304985-58305004 MsG0380014675.01.T01:intron 40.0%
CATACTCTTCAGGGCTTATT+GGG + Chr3:58304840-58304859 None:intergenic 40.0%
CATCCGACATTTGATACTGA+AGG + Chr3:58304216-58304235 None:intergenic 40.0%
CCGTAAGTGGACCAAATTAT+TGG - Chr3:58304093-58304112 MsG0380014675.01.T01:intron 40.0%
CTAAAAGTGGGATAAGGCTT+GGG + Chr3:58302279-58302298 None:intergenic 40.0%
CTGCATTCGAAGTTATGGAT+TGG + Chr3:58304987-58305006 None:intergenic 40.0%
CTTCAATAACCCAAAGAGCA+TGG + Chr3:58302514-58302533 None:intergenic 40.0%
CTTGGGATAATAATTGGAGG+AGG + Chr3:58302080-58302099 None:intergenic 40.0%
CTTTATCACAAGGGATGTCT+TGG + Chr3:58301776-58301795 None:intergenic 40.0%
GAACTTACTGATGTTCCTGA+AGG - Chr3:58305031-58305050 MsG0380014675.01.T01:intron 40.0%
GAAGACATTACACCCAAATG+AGG + Chr3:58303694-58303713 None:intergenic 40.0%
GACCTCGTAGTTCAAATGAA+AGG - Chr3:58304414-58304433 MsG0380014675.01.T01:intron 40.0%
GATAACAAGTGGACCATGTT+TGG - Chr3:58303445-58303464 MsG0380014675.01.T01:intron 40.0%
GATGAAAACTGGATCAAGGA+GGG + Chr3:58301968-58301987 None:intergenic 40.0%
GTAATGCCAAAATCAAGACG+TGG - Chr3:58303098-58303117 MsG0380014675.01.T01:intron 40.0%
GTACTTCCTATGTAGCAAAG+AGG - Chr3:58302703-58302722 MsG0380014675.01.T01:intron 40.0%
GTCCTTTCATTTGAACTACG+AGG + Chr3:58304419-58304438 None:intergenic 40.0%
GTTCTTACTATCAAGCCTTC+AGG + Chr3:58305049-58305068 None:intergenic 40.0%
TAGGAGTCACTTACAGTTTC+AGG + Chr3:58301631-58301650 None:intergenic 40.0%
TGATGAAAACTGGATCAAGG+AGG + Chr3:58301969-58301988 None:intergenic 40.0%
TGGCAAAACTGAAAGCTTCT+AGG + Chr3:58301474-58301493 None:intergenic 40.0%
TTCCATCGGATTTCAAATCC+TGG + Chr3:58303345-58303364 None:intergenic 40.0%
TTCTGCGCTCTGCAAAAAAA+TGG - Chr3:58305129-58305148 MsG0380014675.01.T01:CDS 40.0%
TTGTCTAAATGAACTGCAGG+AGG + Chr3:58302031-58302050 None:intergenic 40.0%
TTGTGCTGAAAAAATCACGG+TGG - Chr3:58300636-58300655 MsG0380014675.01.T01:three_prime_UTR 40.0%
TTGTGGAAACATACCGTAAG+TGG - Chr3:58304080-58304099 MsG0380014675.01.T01:intron 40.0%
TTTCTTGGGCATACTCTTCA+GGG + Chr3:58304849-58304868 None:intergenic 40.0%
! AAAGACTGTTAAGTTGCTCC+AGG - Chr3:58303324-58303343 MsG0380014675.01.T01:intron 40.0%
! AAAGGATGAATCTGGGTTGA+GGG - Chr3:58301898-58301917 MsG0380014675.01.T01:intron 40.0%
! ACAAGACCACGTCTTGATTT+TGG + Chr3:58303107-58303126 None:intergenic 40.0%
! ACCGAAATTTATGGGGTACT+TGG - Chr3:58303753-58303772 MsG0380014675.01.T01:intron 40.0%
! AGGATTCTGAGAGAATCTTC+GGG - Chr3:58300832-58300851 MsG0380014675.01.T01:CDS 40.0%
! CATGCTCTTTGGGTTATTGA+AGG - Chr3:58302512-58302531 MsG0380014675.01.T01:intron 40.0%
! GAGGATTCTGAGAGAATCTT+CGG - Chr3:58300831-58300850 MsG0380014675.01.T01:CDS 40.0%
! GCAGCTAGCTTGTATATTAC+TGG - Chr3:58305190-58305209 MsG0380014675.01.T01:CDS 40.0%
! TTGGGTGCTTCTGAAAGTTA+TGG + Chr3:58301365-58301384 None:intergenic 40.0%
! TTGTGAAATGAATTCTGGGG+AGG - Chr3:58304446-58304465 MsG0380014675.01.T01:intron 40.0%
! TTTAGAAGCTTTTGCAGGAG+GGG - Chr3:58303541-58303560 MsG0380014675.01.T01:intron 40.0%
! TTTTCTTGGGCATACTCTTC+AGG + Chr3:58304850-58304869 None:intergenic 40.0%
!! ACATCTGTTTCTGCTCGTAA+GGG - Chr3:58303140-58303159 MsG0380014675.01.T01:intron 40.0%
!! CTTTTAGAAGCTTTTGCAGG+AGG - Chr3:58303539-58303558 MsG0380014675.01.T01:intron 40.0%
!! GAGAAGAGTTTTGTGATGCT+TGG + Chr3:58301593-58301612 None:intergenic 40.0%
!! TACATCTGTTTCTGCTCGTA+AGG - Chr3:58303139-58303158 MsG0380014675.01.T01:intron 40.0%
!! TTTGATTTTGAGGGTGGATG+AGG - Chr3:58303861-58303880 MsG0380014675.01.T01:intron 40.0%
!!! TGGAGGTAACAGGTTTTGTT+AGG + Chr3:58301845-58301864 None:intergenic 40.0%
!!! TTTTGACGTGCTGCTTGTTT+GGG + Chr3:58301383-58301402 None:intergenic 40.0%
!!! TTTTTGACGTGCTGCTTGTT+TGG + Chr3:58301384-58301403 None:intergenic 40.0%
!!! TTTTTTGCATCAGACAGCCT+AGG + Chr3:58304594-58304613 None:intergenic 40.0%
AACGCAGCAACGACATAAAC+TGG + Chr3:58300894-58300913 None:intergenic 45.0%
AACTTCTCTCTGGCCAAACA+TGG + Chr3:58303461-58303480 None:intergenic 45.0%
AAGTGTTAAGTCGGACCAGA+TGG + Chr3:58302234-58302253 None:intergenic 45.0%
AATCGGTGGAGTGAACTTTG+CGG - Chr3:58300772-58300791 MsG0380014675.01.T01:CDS 45.0%
AATTGTCAAGCCAGTCTCCT+TGG + Chr3:58301518-58301537 None:intergenic 45.0%
ACAAAATTGTGCCTCTGGTC+TGG + Chr3:58301865-58301884 None:intergenic 45.0%
ACGATTGCAAGTCACGAATC+TGG + Chr3:58300681-58300700 None:intergenic 45.0%
ACTGGAACCAGAAGAAGTAG+TGG - Chr3:58304512-58304531 MsG0380014675.01.T01:intron 45.0%
AGAATTGCTCCATCTCTGGT+TGG + Chr3:58301276-58301295 None:intergenic 45.0%
AGCAACGACATAAACTGGTC+TGG + Chr3:58300889-58300908 None:intergenic 45.0%
AGTGTATGAGGGGCTTTCAA+TGG + Chr3:58301928-58301947 None:intergenic 45.0%
AGTTTATGTCGTTGCTGCGT+TGG - Chr3:58300893-58300912 MsG0380014675.01.T01:CDS 45.0%
ATGTCCCAGAATCAGTGCAA+TGG - Chr3:58304121-58304140 MsG0380014675.01.T01:intron 45.0%
ATTGATTGCTTTACAGGCCC+AGG - Chr3:58302920-58302939 MsG0380014675.01.T01:CDS 45.0%
CAACAGATGCCAGACTTTCA+GGG - Chr3:58304244-58304263 MsG0380014675.01.T01:intron 45.0%
CGAAGCCGAGACATAAAGAT+CGG - Chr3:58300701-58300720 MsG0380014675.01.T01:exon 45.0%
CGATTGCAAGTCACGAATCT+GGG + Chr3:58300680-58300699 None:intergenic 45.0%
GAAAAAATCACGGTGGAACC+AGG - Chr3:58300643-58300662 MsG0380014675.01.T01:three_prime_UTR 45.0%
GAATTCGGTAATTGGGAGAG+TGG - Chr3:58300924-58300943 MsG0380014675.01.T01:intron 45.0%
GACTTCATAGCTCATTCCAC+AGG + Chr3:58303207-58303226 None:intergenic 45.0%
GAGCTCCTTGACACATTAGT+TGG - Chr3:58302879-58302898 MsG0380014675.01.T01:CDS 45.0%
GATGGCAGAACACAACAAAG+AGG + Chr3:58302216-58302235 None:intergenic 45.0%
GCAAAGAGGTCCTGGTTTAA+TGG - Chr3:58302717-58302736 MsG0380014675.01.T01:intron 45.0%
GCATACTCTTCAGGGCTTAT+TGG + Chr3:58304841-58304860 None:intergenic 45.0%
GCTAAAAGTGGGATAAGGCT+TGG + Chr3:58302280-58302299 None:intergenic 45.0%
GCTATATGGCCATGCTCTTT+GGG - Chr3:58302502-58302521 MsG0380014675.01.T01:intron 45.0%
GGAGGAGGGATTTAGTCAAT+GGG + Chr3:58302065-58302084 None:intergenic 45.0%
GGAGTCACTTACAGTTTCAG+GGG + Chr3:58301629-58301648 None:intergenic 45.0%
GGGATGTCTTGGTTGTCATT+CGG + Chr3:58301765-58301784 None:intergenic 45.0%
GGTCATGTCTCAACTCTAAG+TGG + Chr3:58301686-58301705 None:intergenic 45.0%
GTACCCTGCATTCGAAGTTA+TGG + Chr3:58304992-58305011 None:intergenic 45.0%
GTGTATGAGGGGCTTTCAAT+GGG + Chr3:58301927-58301946 None:intergenic 45.0%
TCAACAGATGCCAGACTTTC+AGG - Chr3:58304243-58304262 MsG0380014675.01.T01:intron 45.0%
TCACGCCGATCTTTATGTCT+CGG + Chr3:58300709-58300728 None:intergenic 45.0%
TCTGAGAGAATCTTCGGGTA+CGG - Chr3:58300837-58300856 MsG0380014675.01.T01:CDS 45.0%
TGACGAGGATTCCAAATGGA+TGG - Chr3:58300726-58300745 MsG0380014675.01.T01:CDS 45.0%
TGAGAACCAGCTTGATGAAC+TGG - Chr3:58304494-58304513 MsG0380014675.01.T01:intron 45.0%
TGGAGGAGGGATTTAGTCAA+TGG + Chr3:58302066-58302085 None:intergenic 45.0%
TGTCCCAGAATCAGTGCAAT+GGG - Chr3:58304122-58304141 MsG0380014675.01.T01:intron 45.0%
! AGGTGTTGTGCATCCTCATT+TGG - Chr3:58303678-58303697 MsG0380014675.01.T01:intron 45.0%
! CTCCAGGATTTGAAATCCGA+TGG - Chr3:58303340-58303359 MsG0380014675.01.T01:intron 45.0%
! CTTTGTTGTGTTCTGCCATC+TGG - Chr3:58302216-58302235 MsG0380014675.01.T01:intron 45.0%
! GCAACTTGCACCTTTTCCTT+TGG + Chr3:58301141-58301160 None:intergenic 45.0%
! GGTGTTGTGCATCCTCATTT+GGG - Chr3:58303679-58303698 MsG0380014675.01.T01:intron 45.0%
! TTAGAAGCTTTTGCAGGAGG+GGG - Chr3:58303542-58303561 MsG0380014675.01.T01:intron 45.0%
! TTTTCCACATCCAAGGAGAC+TGG - Chr3:58301505-58301524 MsG0380014675.01.T01:CDS 45.0%
!! ACACCCATTGCACTGATTCT+GGG + Chr3:58304128-58304147 None:intergenic 45.0%
!! ATGACTCATGAAGGGCACTA+TGG - Chr3:58302480-58302499 MsG0380014675.01.T01:intron 45.0%
!! CACTTGAGGCATTTTCCACT+GGG + Chr3:58303031-58303050 None:intergenic 45.0%
!! CCAAATGGATGGTGGAATCA+CGG - Chr3:58300737-58300756 MsG0380014675.01.T01:CDS 45.0%
!! CGCGTCTCTGAAATTCTGAT+TGG - Chr3:58304718-58304737 MsG0380014675.01.T01:intron 45.0%
!! GCGTTGGTGTCGTATGAATT+CGG - Chr3:58300909-58300928 MsG0380014675.01.T01:CDS 45.0%
!! TACACCCATTGCACTGATTC+TGG + Chr3:58304129-58304148 None:intergenic 45.0%
!! TGAAGGGCACTATGGCTATA+TGG - Chr3:58302488-58302507 MsG0380014675.01.T01:intron 45.0%
!!! ACACCCACCCTTTTTTGTGA+GGG + Chr3:58301173-58301192 None:intergenic 45.0%
!!! TACACCCACCCTTTTTTGTG+AGG + Chr3:58301174-58301193 None:intergenic 45.0%
AAATTGTGCCTCTGGTCTGG+AGG + Chr3:58301862-58301881 None:intergenic 50.0%
AACTTCGGAGGGAGGAATCA+AGG - Chr3:58300802-58300821 MsG0380014675.01.T01:CDS 50.0%
ACATAAAGATCGGCGTGACG+AGG - Chr3:58300711-58300730 MsG0380014675.01.T01:exon 50.0%
ACCTGACATGTCATTCCCAG+TGG - Chr3:58303013-58303032 MsG0380014675.01.T01:intron 50.0%
CCAGGACCTCTTTGCTACAT+AGG + Chr3:58302712-58302731 None:intergenic 50.0%
CCAGTGGAAAATGCCTCAAG+TGG - Chr3:58303029-58303048 MsG0380014675.01.T01:intron 50.0%
CCGTGATTCCACCATCCATT+TGG + Chr3:58300740-58300759 None:intergenic 50.0%
CCTATGTAGCAAAGAGGTCC+TGG - Chr3:58302709-58302728 MsG0380014675.01.T01:intron 50.0%
CGAGGATTCCAAATGGATGG+TGG - Chr3:58300729-58300748 MsG0380014675.01.T01:CDS 50.0%
CTCAAGTGGTGGCAATTCGA+AGG - Chr3:58303043-58303062 MsG0380014675.01.T01:intron 50.0%
CTGGTTCCAGTTCATCAAGC+TGG + Chr3:58304503-58304522 None:intergenic 50.0%
CTTCGAATTGCCACCACTTG+AGG + Chr3:58303045-58303064 None:intergenic 50.0%
CTTTGCGGTGGAGTGAACTT+CGG - Chr3:58300787-58300806 MsG0380014675.01.T01:CDS 50.0%
GCTCAGATGCATTCTTCTGC+TGG + Chr3:58304560-58304579 None:intergenic 50.0%
GGACCCTCACAAAAAAGGGT+GGG - Chr3:58301167-58301186 MsG0380014675.01.T01:intron 50.0%
GGCTATATGGCCATGCTCTT+TGG - Chr3:58302501-58302520 MsG0380014675.01.T01:intron 50.0%
GTGGAAAATGCCTCAAGTGG+TGG - Chr3:58303032-58303051 MsG0380014675.01.T01:intron 50.0%
GTTGAGAGAGGCGAAACTTG+TGG - Chr3:58304063-58304082 MsG0380014675.01.T01:intron 50.0%
GTTTCTGCTCGTAAGGGAAG+AGG - Chr3:58303146-58303165 MsG0380014675.01.T01:intron 50.0%
TCACAATCACCGCAAGCAAG+TGG + Chr3:58302947-58302966 None:intergenic 50.0%
TCCACTGGGAATGACATGTC+AGG + Chr3:58303017-58303036 None:intergenic 50.0%
TGGACCCTCACAAAAAAGGG+TGG - Chr3:58301166-58301185 MsG0380014675.01.T01:intron 50.0%
TGTCTCGTCCAACCTGACAA+TGG + Chr3:58305071-58305090 None:intergenic 50.0%
! ACAGTGTGTGGAGCATTCTC+TGG + Chr3:58302379-58302398 None:intergenic 50.0%
! ATCTGGGATGTTCGTGAACC+TGG + Chr3:58300664-58300683 None:intergenic 50.0%
!! AATGGATGGTGGAATCACGG+TGG - Chr3:58300740-58300759 MsG0380014675.01.T01:CDS 50.0%
!! CCACTTGAGGCATTTTCCAC+TGG + Chr3:58303032-58303051 None:intergenic 50.0%
!! GTAATTGGGAGAGTGGGTTG+AGG - Chr3:58300931-58300950 MsG0380014675.01.T01:intron 50.0%
ACCTGTTACCTCCAGACCAG+AGG - Chr3:58301851-58301870 MsG0380014675.01.T01:CDS 55.0%
AGATGCCAGACTTTCAGGGC+CGG - Chr3:58304248-58304267 MsG0380014675.01.T01:intron 55.0%
AGTTCGAGGACGTGAACGAG+AGG - Chr3:58300956-58300975 MsG0380014675.01.T01:intron 55.0%
CAAGCCAGTCTCCTTGGATG+TGG + Chr3:58301512-58301531 None:intergenic 55.0%
CTGAGCCTTCACTCACACCT+AGG - Chr3:58304574-58304593 MsG0380014675.01.T01:intron 55.0%
GACAGCCTAGGTGTGAGTGA+AGG + Chr3:58304582-58304601 None:intergenic 55.0%
GAGAGAATCTTCGGGTACGG+CGG - Chr3:58300840-58300859 MsG0380014675.01.T01:CDS 55.0%
GGACTGGACATGACAGTGTG+TGG + Chr3:58302391-58302410 None:intergenic 55.0%
GGCGTGACGAGGATTCCAAA+TGG - Chr3:58300722-58300741 MsG0380014675.01.T01:CDS 55.0%
GTTCGAGGACGTGAACGAGA+GGG - Chr3:58300957-58300976 MsG0380014675.01.T01:intron 55.0%
TATACCCGGCCCTGAAAGTC+TGG + Chr3:58304256-58304275 None:intergenic 55.0%
! ATGGTGGAATCACGGTGGAC+GGG - Chr3:58300745-58300764 MsG0380014675.01.T01:CDS 55.0%
!! AGTGGGTTGAGGAGAGTTCG+AGG - Chr3:58300942-58300961 MsG0380014675.01.T01:intron 55.0%
!! CACGGTGGACGGGTTGTAAT+CGG - Chr3:58300755-58300774 MsG0380014675.01.T01:CDS 55.0%
!! GATGGTGGAATCACGGTGGA+CGG - Chr3:58300744-58300763 MsG0380014675.01.T01:CDS 55.0%
!! GTATCCTCCAGCTCTGGATC+CGG - Chr3:58303369-58303388 MsG0380014675.01.T01:intron 55.0%
CACCGCAAGCAAGTGGTCCT+GGG + Chr3:58302940-58302959 None:intergenic 60.0%
CCTTTCACCGGATCCAGAGC+TGG + Chr3:58303379-58303398 None:intergenic 60.0%
CGGTGGAGTGAACTTTGCGG+TGG - Chr3:58300775-58300794 MsG0380014675.01.T01:CDS 60.0%
GAGGACGTGAACGAGAGGGT+GGG - Chr3:58300961-58300980 MsG0380014675.01.T01:intron 60.0%
GATGCCAGACTTTCAGGGCC+GGG - Chr3:58304249-58304268 MsG0380014675.01.T01:intron 60.0%
GCCTCTGGTCTGGAGGTAAC+AGG + Chr3:58301855-58301874 None:intergenic 60.0%
GCGGTGGAGTGAACTTCGGA+GGG - Chr3:58300791-58300810 MsG0380014675.01.T01:CDS 60.0%
GGAGGAATCAAGGCGTGACG+AGG - Chr3:58300812-58300831 MsG0380014675.01.T01:CDS 60.0%
GTGGAGTGAACTTCGGAGGG+AGG - Chr3:58300794-58300813 MsG0380014675.01.T01:CDS 60.0%
TCACCGCAAGCAAGTGGTCC+TGG + Chr3:58302941-58302960 None:intergenic 60.0%
TCCACAGGCAGAACCGCGAT+GGG + Chr3:58303192-58303211 None:intergenic 60.0%
TGCGGTGGAGTGAACTTCGG+AGG - Chr3:58300790-58300809 MsG0380014675.01.T01:CDS 60.0%
TTCACCGGATCCAGAGCTGG+AGG + Chr3:58303376-58303395 None:intergenic 60.0%
TTCCACAGGCAGAACCGCGA+TGG + Chr3:58303193-58303212 None:intergenic 60.0%
!! CCAGCTCTGGATCCGGTGAA+AGG - Chr3:58303376-58303395 MsG0380014675.01.T01:intron 60.0%
!! GGTGGACGGGTTGTAATCGG+TGG - Chr3:58300758-58300777 MsG0380014675.01.T01:CDS 60.0%
CCACAGGCAGAACCGCGATG+GGG + Chr3:58303191-58303210 None:intergenic 65.0%
CGAGGACGTGAACGAGAGGG+TGG - Chr3:58300960-58300979 MsG0380014675.01.T01:intron 65.0%
GGCCCAGGACCACTTGCTTG+CGG - Chr3:58302935-58302954 MsG0380014675.01.T01:CDS 65.0%
CCCCATCGCGGTTCTGCCTG+TGG - Chr3:58303188-58303207 MsG0380014675.01.T01:intron 70.0%
GGGTACGGCGGTCACAGCGA+CGG - Chr3:58300852-58300871 MsG0380014675.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 58300616 58305323 58300616 ID=MsG0380014675.01;Name=MsG0380014675.01
Chr3 mRNA 58300616 58305323 58300616 ID=MsG0380014675.01.T01;Parent=MsG0380014675.01;Name=MsG0380014675.01.T01;_AED=0.46;_eAED=0.54;_QI=0|0.66|0.57|1|0.83|0.85|7|104|458
Chr3 exon 58300616 58300932 58300616 ID=MsG0380014675.01.T01:exon:12467;Parent=MsG0380014675.01.T01
Chr3 exon 58301027 58301153 58301027 ID=MsG0380014675.01.T01:exon:12466;Parent=MsG0380014675.01.T01
Chr3 exon 58301323 58301561 58301323 ID=MsG0380014675.01.T01:exon:12465;Parent=MsG0380014675.01.T01
Chr3 exon 58301669 58301883 58301669 ID=MsG0380014675.01.T01:exon:12464;Parent=MsG0380014675.01.T01
Chr3 exon 58302542 58302652 58302542 ID=MsG0380014675.01.T01:exon:12463;Parent=MsG0380014675.01.T01
Chr3 exon 58302742 58303003 58302742 ID=MsG0380014675.01.T01:exon:12462;Parent=MsG0380014675.01.T01
Chr3 exon 58305114 58305323 58305114 ID=MsG0380014675.01.T01:exon:12461;Parent=MsG0380014675.01.T01
Chr3 CDS 58305114 58305323 58305114 ID=MsG0380014675.01.T01:cds;Parent=MsG0380014675.01.T01
Chr3 CDS 58302742 58303003 58302742 ID=MsG0380014675.01.T01:cds;Parent=MsG0380014675.01.T01
Chr3 CDS 58302542 58302652 58302542 ID=MsG0380014675.01.T01:cds;Parent=MsG0380014675.01.T01
Chr3 CDS 58301669 58301883 58301669 ID=MsG0380014675.01.T01:cds;Parent=MsG0380014675.01.T01
Chr3 CDS 58301323 58301561 58301323 ID=MsG0380014675.01.T01:cds;Parent=MsG0380014675.01.T01
Chr3 CDS 58301027 58301153 58301027 ID=MsG0380014675.01.T01:cds;Parent=MsG0380014675.01.T01
Chr3 CDS 58300720 58300932 58300720 ID=MsG0380014675.01.T01:cds;Parent=MsG0380014675.01.T01
Chr3 three_prime_UTR 58300616 58300719 58300616 ID=MsG0380014675.01.T01:three_prime_utr;Parent=MsG0380014675.01.T01
Gene Sequence

>MsG0380014675.01.T01

ATGAAAGAATCTCGTGATCGTTGTGCTGAAAAAATCACGGTGGAACCAGGTTCACGAACATCCCAGATTCGTGACTTGCAATCGTCGAAGCCGAGACATAAAGATCGGCGTGACGAGGATTCCAAATGGATGGTGGAATCACGGTGGACGGGTTGTAATCGGTGGAGTGAACTTTGCGGTGGAGTGAACTTCGGAGGGAGGAATCAAGGCGCCCAGGACCACTTGCTTGCGGTGATTGTGAAAACTCCTTCTCCAAGTAATAAACTGTACATTGTTTTTGTGATTAGACCTGACATGTCATTCCCAGTGGAAAATGCCTCAAGTGGTGGCAATTCGAAGGACAAAAGCAGTACATTTGACCAAGGTTTTTTTGTAATGCCAAAATCAAGACGTGGTCTTGTAGATGAATATACTACATCTGTTTCTGCTCGTAAGGGAAGAGGTGTCATCAACATTAAATTGCCCCATCGCGTTGGACTTCTTGAAGATGTTAGCAGTTCTGTTTACGCAAAGACTGTTAAGTTGCTCCAGGATTTGAAATCCGATGGAAATAAGTATCCTCCAGCTCTGGATCCGGTGAAAGATCTAAAGTTGAGAGAGGCGAAACTTGTGGAAACATACCGTAAGTGGACCAAATTATTGGAGAAGATGTCCCAGAATCAGTGCAATGGGTGTATAAAATTGGCAGAACACCTCAAGTTAGCAAAAGAGATAAAAGCACACAAAGAAGAAGTCTGTTCCCTTCAGTATCAAATGTCGGATGAAGCACTTCAACAGATGCCAGACTTTCAGGGCCGGATAGATGTTCTAAAGGAAATTGGATGCATTGATGAAGACCTCGTAGTTCAAATGAAAGGACGAGTTGCTTGTGAAATGAATTCTGGGGAGGAATTGATATGTACTGAGTGCTTGTTTGAGAACCAGCTTGATGAACTGGAACCAGAAGAAGTAGTGGCGTTAATGTCTGCTTTTGTGTTCCAGCAGAAGAATGCATCTGAGCCTTCACTCACACCTAGGCTGTCTGATGCAAAAAATAGACTGTACAAAACAGCTATAAGACTAGGAGAGCTTCAAGCACAGTTTAATCTCCCAATAAGCCCTGAAGAGTATGCCCAAGAAAATCTCAAATTTGGTCTCGTTGAAGTGGTTTATGAATGGGCAAAGGGTACTCCGTTTGCTGACATATGTGAACTTACTGATGTTCCTGAAGGCTTGATAGTAAGAACCATTGTCAGGTTGGACGAGACATGTCGAGAGTTCAAAAATTCTGCAGCTATTATGGGTAATTCTGCGCTCTGCAAAAAAATGGAAATTGCGTCTAATGCAATAAAGCGTGACATTGTATTTGCAGCTAGCTTGTATATTACTGGCGTATGA
Protein sequence

>MsG0380014675.01.T01

MKESRDRCAEKITVEPGSRTSQIRDLQSSKPRHKDRRDEDSKWMVESRWTGCNRWSELCGGVNFGGRNQGAQDHLLAVIVKTPSPSNKLYIVFVIRPDMSFPVENASSGGNSKDKSSTFDQGFFVMPKSRRGLVDEYTTSVSARKGRGVINIKLPHRVGLLEDVSSSVYAKTVKLLQDLKSDGNKYPPALDPVKDLKLREAKLVETYRKWTKLLEKMSQNQCNGCIKLAEHLKLAKEIKAHKEEVCSLQYQMSDEALQQMPDFQGRIDVLKEIGCIDEDLVVQMKGRVACEMNSGEELICTECLFENQLDELEPEEVVALMSAFVFQQKNASEPSLTPRLSDAKNRLYKTAIRLGELQAQFNLPISPEEYAQENLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDETCREFKNSAAIMGNSALCKKMEIASNAIKRDIVFAASLYITGV*