AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042776.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042776.01.T01 MTR_8g021380 94.468 235 13 0 1 235 1 235 3.89e-165 455
MsG0880042776.01.T01 MTR_8g021380 78.008 241 12 1 1 200 1 241 1.08e-128 364
MsG0880042776.01.T01 MTR_2g042900 33.761 234 112 9 11 210 12 236 4.14e-21 89.0
MsG0880042776.01.T01 MTR_2g042900 29.249 253 108 8 11 200 12 256 6.00e-13 66.6
MsG0880042776.01.T01 MTR_5g013530 32.283 127 71 4 85 208 24 138 1.17e-12 64.3
MsG0880042776.01.T01 MTR_5g013530 33.058 121 66 4 91 208 8 116 2.48e-12 63.2
MsG0880042776.01.T01 MTR_4g124960 30.693 202 100 7 11 208 12 177 3.70e-12 63.5
MsG0880042776.01.T01 MTR_5g013515 31.193 109 72 1 100 208 9 114 2.66e-11 60.1
MsG0880042776.01.T01 MTR_5g013520 31.452 124 64 3 91 208 1 109 3.12e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042776.01.T01 AT1G72450 35.000 220 113 7 15 212 3 214 1.24e-23 96.3
MsG0880042776.01.T01 AT1G17380 34.101 217 108 8 17 212 11 213 1.05e-18 82.8
MsG0880042776.01.T01 AT1G19180 33.036 224 115 8 12 209 14 228 1.36e-18 82.4
MsG0880042776.01.T01 AT1G19180 33.036 224 115 8 12 209 14 228 1.36e-18 82.4
MsG0880042776.01.T01 AT1G72450 33.173 208 109 6 15 200 3 202 1.94e-17 78.2
MsG0880042776.01.T01 AT1G74950 29.600 250 142 9 1 223 1 243 4.62e-16 75.5
MsG0880042776.01.T01 AT1G19180 36.207 116 70 3 96 209 49 162 3.22e-13 66.2
MsG0880042776.01.T01 AT1G17380 33.962 159 80 5 95 230 59 215 3.45e-13 67.4
MsG0880042776.01.T01 AT1G17380 31.707 205 108 7 16 202 10 200 6.21e-13 66.2

Find 49 sgRNAs with CRISPR-Local

Find 137 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTGCTTTCTTTGGGAAAA+TGG 0.109042 8:+13925321 MsG0880042776.01.T01:CDS
TTGAAGGAAAAGAGAATTTC+TGG 0.175716 8:+13925289 MsG0880042776.01.T01:CDS
GATTCTACACCTGCTTTCTT+TGG 0.212849 8:+13925313 MsG0880042776.01.T01:CDS
TTAAGAAGTGAAGCTCTTCT+TGG 0.236604 8:-13927190 None:intergenic
CAATTGACGATATTCTATTC+TGG 0.252458 8:+13926825 MsG0880042776.01.T01:CDS
GTGTTTGTTTGAGGAATTTC+GGG 0.278263 8:-13926987 None:intergenic
AACTAATTTACCTGAACATT+TGG 0.278582 8:-13927042 None:intergenic
GAACTTCTCCGGTGCCTTAC+CGG 0.289709 8:-13925230 None:intergenic
TCCTTGTTCGATTGTTTCTA+AGG 0.291189 8:-13927012 None:intergenic
AGTGTTTGTTTGAGGAATTT+CGG 0.311669 8:-13926988 None:intergenic
TGATCGGAAGAATTATCTTT+AGG 0.316360 8:-13927412 None:intergenic
AGAGGACCCTATCAAATTAA+TGG 0.329656 8:+13927355 MsG0880042776.01.T01:CDS
TTTGTGACCATTAATTTGAT+AGG 0.341555 8:-13927362 None:intergenic
ATTCTACACCTGCTTTCTTT+GGG 0.379166 8:+13925314 MsG0880042776.01.T01:CDS
GGAAACCAAGCCAAATGTTC+AGG 0.389691 8:+13927032 MsG0880042776.01.T01:CDS
CACTAGTGACCGGTGCACTT+GGG 0.400373 8:-13926950 None:intergenic
AATTGACGATATTCTATTCT+GGG 0.405626 8:+13926826 MsG0880042776.01.T01:CDS
TCACTAGTGACCGGTGCACT+TGG 0.422956 8:-13926951 None:intergenic
AACTAAATCACTATAAGTTA+AGG 0.443726 8:-13927441 None:intergenic
GTGCCTTACCGGTGAGTCTC+CGG 0.457733 8:-13925219 None:intergenic
TGTGAAAATTTGAACTTCTC+CGG 0.466884 8:-13925241 None:intergenic
TCTAAGGCAGTGTTTGTTTG+AGG 0.469946 8:-13926996 None:intergenic
TTTGGGAAAATGGAACCTAA+AGG 0.472484 8:+13925331 MsG0880042776.01.T01:CDS
TTGTGACCATTAATTTGATA+GGG 0.477946 8:-13927361 None:intergenic
ACTAGTGACCGGTGCACTTG+GGG 0.487227 8:-13926949 None:intergenic
TACGAATGCAACTGAGATCA+TGG 0.488655 8:+13926878 MsG0880042776.01.T01:CDS
GTATCAAACTTCTTAATGCA+AGG 0.499300 8:-13925740 None:intergenic
CTAATACTGTGTCGGATGGC+CGG 0.499466 8:+13925200 MsG0880042776.01.T01:CDS
CCAACATGCAAAACTCAGAT+GGG 0.513652 8:+13925663 MsG0880042776.01.T01:CDS
ATTTACCTGAACATTTGGCT+TGG 0.519424 8:-13927037 None:intergenic
TGAATCTCTTCCTCAGCTTG+TGG 0.531942 8:+13925712 MsG0880042776.01.T01:CDS
GCATTAAGAAGTTTGATACA+AGG 0.535356 8:+13925744 MsG0880042776.01.T01:CDS
GCCAACATGCAAAACTCAGA+TGG 0.537855 8:+13925662 MsG0880042776.01.T01:CDS
TCGGATGGCCGGAGACTCAC+CGG 0.544946 8:+13925211 MsG0880042776.01.T01:CDS
CTAGTGACCGGTGCACTTGG+GGG 0.549856 8:-13926948 None:intergenic
TGCAACTGAGATCATGGAGT+TGG 0.557096 8:+13926884 MsG0880042776.01.T01:CDS
TAAGTTAAGGTCGAATTGAT+CGG 0.557387 8:-13927428 None:intergenic
GAGACTCACCGGTAAGGCAC+CGG 0.568974 8:+13925222 MsG0880042776.01.T01:CDS
TAGTGACCGGTGCACTTGGG+GGG 0.574627 8:-13926947 None:intergenic
TGGCCGGAGACTCACCGGTA+AGG 0.579025 8:+13925216 MsG0880042776.01.T01:CDS
TTCTTGAGAAAAGAAAAGAA+AGG 0.582036 8:+13927215 MsG0880042776.01.T01:CDS
GAATAGAATATCGTCAATTG+TGG 0.583205 8:-13926822 None:intergenic
AAATTTAGCTAATACTGTGT+CGG 0.588601 8:+13925192 MsG0880042776.01.T01:CDS
ATGATCTCAGTTGCATTCGT+AGG 0.602248 8:-13926876 None:intergenic
TGTTGCAGGGTCATTGCTAG+AGG 0.603165 8:+13927337 MsG0880042776.01.T01:intron
TTAGCTAATACTGTGTCGGA+TGG 0.619524 8:+13925196 MsG0880042776.01.T01:CDS
CAACATGCAAAACTCAGATG+GGG 0.638179 8:+13925664 MsG0880042776.01.T01:CDS
GCCTTAGAAACAATCGAACA+AGG 0.645101 8:+13927011 MsG0880042776.01.T01:CDS
AACATGCAAAACTCAGATGG+GGG 0.692839 8:+13925665 MsG0880042776.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAAAATTAAATA+AGG - Chr8:13925476-13925495 None:intergenic 0.0%
!!! ATTATTATTTTGTTACAAAA+TGG + Chr8:13925487-13925506 MsG0880042776.01.T01:intron 10.0%
!! TCAATATTGTAAGAAATATT+CGG + Chr8:13926680-13926699 MsG0880042776.01.T01:intron 15.0%
!!! ATATTGGTTAGAATAATAAT+TGG + Chr8:13926370-13926389 MsG0880042776.01.T01:intron 15.0%
!!! TGTAAATTAATTTTATTGTG+AGG - Chr8:13926625-13926644 None:intergenic 15.0%
!!! TTAATGTTTTATTTCTTACT+TGG + Chr8:13925379-13925398 MsG0880042776.01.T01:intron 15.0%
!!! TTTAGAGTATCATTTTATTT+TGG - Chr8:13926649-13926668 None:intergenic 15.0%
!!! TTTAGTATTGGAAAATTATT+GGG + Chr8:13925519-13925538 MsG0880042776.01.T01:intron 15.0%
!! AAATATATATTGCAAGAGTT+TGG + Chr8:13926741-13926760 MsG0880042776.01.T01:intron 20.0%
!! AAGGAAATAAAATAAACAGA+CGG - Chr8:13927267-13927286 None:intergenic 20.0%
!! TAGATCTATTTATAACAAAG+TGG + Chr8:13925988-13926007 MsG0880042776.01.T01:intron 20.0%
!!! AATGTTTTTCCATGTAAATT+AGG + Chr8:13925879-13925898 MsG0880042776.01.T01:intron 20.0%
!!! GTTTAGTATTGGAAAATTAT+TGG + Chr8:13925518-13925537 MsG0880042776.01.T01:intron 20.0%
!!! TAAATAAGTGTAGATTTGTT+TGG + Chr8:13926299-13926318 MsG0880042776.01.T01:intron 20.0%
! AAATTTAGCTAATACTGTGT+CGG + Chr8:13925192-13925211 MsG0880042776.01.T01:CDS 25.0%
! AACCAAACAATTAATTGACA+AGG - Chr8:13925440-13925459 None:intergenic 25.0%
! AACTAATTTACCTGAACATT+TGG - Chr8:13927045-13927064 None:intergenic 25.0%
! AAGAGAAAGATTATACCTTT+AGG - Chr8:13925349-13925368 None:intergenic 25.0%
! AATTAATGGTCACAAAAATG+AGG + Chr8:13927369-13927388 MsG0880042776.01.T01:CDS 25.0%
! AATTGACGATATTCTATTCT+GGG + Chr8:13926826-13926845 MsG0880042776.01.T01:CDS 25.0%
! ATCTTGATTAAAACAATCGT+CGG + Chr8:13926069-13926088 MsG0880042776.01.T01:intron 25.0%
! ATTAATGGTCACAAAAATGA+GGG + Chr8:13927370-13927389 MsG0880042776.01.T01:CDS 25.0%
! CAAAAATAGACAACATACAA+AGG - Chr8:13927286-13927305 None:intergenic 25.0%
! CAAGATTCAATTAATTAGCA+TGG - Chr8:13927314-13927333 None:intergenic 25.0%
! TATTGTAAGAAATATTCGGT+AGG + Chr8:13926684-13926703 MsG0880042776.01.T01:intron 25.0%
! TTCTTGAGAAAAGAAAAGAA+AGG + Chr8:13927215-13927234 MsG0880042776.01.T01:CDS 25.0%
! TTGTTACAAAATGGATGATT+TGG + Chr8:13925496-13925515 MsG0880042776.01.T01:intron 25.0%
!! AACAGATCTATACTTCTTTT+TGG - Chr8:13926137-13926156 None:intergenic 25.0%
!! AGATTTGTTTGATTGAAAAG+AGG + Chr8:13926472-13926491 MsG0880042776.01.T01:intron 25.0%
!! AGGTTGAAGTATTAATGATA+TGG - Chr8:13926525-13926544 None:intergenic 25.0%
!! ATAATCTTTCTCTTGTTTCA+TGG + Chr8:13925355-13925374 MsG0880042776.01.T01:intron 25.0%
!! ATGTAAATTAGGTTAGTCAT+GGG + Chr8:13925890-13925909 MsG0880042776.01.T01:intron 25.0%
!! CGGAAATAGAAATTTTTAAC+TGG - Chr8:13927247-13927266 None:intergenic 25.0%
!! TACATGTTAGTGATCAATTT+TGG - Chr8:13926554-13926573 None:intergenic 25.0%
!! TTGTGACCATTAATTTGATA+GGG - Chr8:13927364-13927383 None:intergenic 25.0%
!! TTTGTGACCATTAATTTGAT+AGG - Chr8:13927365-13927384 None:intergenic 25.0%
!!! AATCTTTCATTTTGATCTTG+TGG - Chr8:13926457-13926476 None:intergenic 25.0%
!!! GATACAATTCAGTTTTGAAA+AGG + Chr8:13925925-13925944 MsG0880042776.01.T01:intron 25.0%
!!! TGGAAAAACATTTTGATAGT+AGG - Chr8:13925871-13925890 None:intergenic 25.0%
!!! TGTATGTTGTCTATTTTTGT+TGG + Chr8:13927287-13927306 MsG0880042776.01.T01:intron 25.0%
!!! TTTAATTTTTCACTAGTGAC+CGG - Chr8:13926963-13926982 None:intergenic 25.0%
AGTGTTTGTTTGAGGAATTT+CGG - Chr8:13926991-13927010 None:intergenic 30.0%
ATTGAATCTTGAATTGTTGC+AGG + Chr8:13927323-13927342 MsG0880042776.01.T01:intron 30.0%
CAATTGACGATATTCTATTC+TGG + Chr8:13926825-13926844 MsG0880042776.01.T01:CDS 30.0%
CATGACTAACCTAATTTACA+TGG - Chr8:13925891-13925910 None:intergenic 30.0%
CTAACATGTATGTACGAAAA+AGG + Chr8:13926564-13926583 MsG0880042776.01.T01:intron 30.0%
GAATAGAATATCGTCAATTG+TGG - Chr8:13926825-13926844 None:intergenic 30.0%
GAGAAAAGAAAAGAAAGGTA+TGG + Chr8:13927220-13927239 MsG0880042776.01.T01:intron 30.0%
GCATTAAGAAGTTTGATACA+AGG + Chr8:13925744-13925763 MsG0880042776.01.T01:CDS 30.0%
GGTCACTAGTGAAAAATTAA+AGG + Chr8:13926962-13926981 MsG0880042776.01.T01:CDS 30.0%
GTATCAAACTTCTTAATGCA+AGG - Chr8:13925743-13925762 None:intergenic 30.0%
TAAGTTAAGGTCGAATTGAT+CGG - Chr8:13927431-13927450 None:intergenic 30.0%
TAGCAAAAGTCGAATTGTTT+GGG + Chr8:13926171-13926190 MsG0880042776.01.T01:intron 30.0%
TGATCGGAAGAATTATCTTT+AGG - Chr8:13927415-13927434 None:intergenic 30.0%
TGCCTTGTCAATTAATTGTT+TGG + Chr8:13925435-13925454 MsG0880042776.01.T01:intron 30.0%
TGTGAAAATTTGAACTTCTC+CGG - Chr8:13925244-13925263 None:intergenic 30.0%
TTAGCAAAAGTCGAATTGTT+TGG + Chr8:13926170-13926189 MsG0880042776.01.T01:intron 30.0%
TTGAAGGAAAAGAGAATTTC+TGG + Chr8:13925289-13925308 MsG0880042776.01.T01:CDS 30.0%
TTGAATCTTGAATTGTTGCA+GGG + Chr8:13927324-13927343 MsG0880042776.01.T01:intron 30.0%
TTGCATGCTTTGTAATGTTT+CGG - Chr8:13927114-13927133 None:intergenic 30.0%
! AGGTATTGTTGTGTTAAGTT+TGG + Chr8:13926584-13926603 MsG0880042776.01.T01:intron 30.0%
! CATGTAAATTAGGTTAGTCA+TGG + Chr8:13925889-13925908 MsG0880042776.01.T01:intron 30.0%
!! GATTTTTCTAGCAAGTACAA+AGG + Chr8:13925631-13925650 MsG0880042776.01.T01:intron 30.0%
!! GTTTTGATCTTCTAGTCTAA+GGG - Chr8:13926277-13926296 None:intergenic 30.0%
!! TGGATGATTTGGTTTAGTAT+TGG + Chr8:13925507-13925526 MsG0880042776.01.T01:intron 30.0%
!! TGTTAGTGATCAATTTTGGT+TGG - Chr8:13926550-13926569 None:intergenic 30.0%
!!! AGTTTGCTGATTGTGTTTTT+TGG + Chr8:13925603-13925622 MsG0880042776.01.T01:intron 30.0%
!!! GTTAGTGATCAATTTTGGTT+GGG - Chr8:13926549-13926568 None:intergenic 30.0%
AAAAATGAGGGTAGTAGTTC+TGG + Chr8:13927382-13927401 MsG0880042776.01.T01:CDS 35.0%
AGAGGACCCTATCAAATTAA+TGG + Chr8:13927355-13927374 MsG0880042776.01.T01:CDS 35.0%
ATTCTACACCTGCTTTCTTT+GGG + Chr8:13925314-13925333 MsG0880042776.01.T01:CDS 35.0%
ATTTACCTGAACATTTGGCT+TGG - Chr8:13927040-13927059 None:intergenic 35.0%
CTTCTAGTCTAAGGGAAATT+GGG - Chr8:13926269-13926288 None:intergenic 35.0%
GTAGTACTCGAGTTCAATAT+TGG + Chr8:13926354-13926373 MsG0880042776.01.T01:intron 35.0%
GTGTTTGTTTGAGGAATTTC+GGG - Chr8:13926990-13927009 None:intergenic 35.0%
TAAAATCGTGAATCAGTGAG+AGG + Chr8:13926104-13926123 MsG0880042776.01.T01:intron 35.0%
TCTAGACATCTAATGACAAG+TGG - Chr8:13925972-13925991 None:intergenic 35.0%
TCTTCTAGTCTAAGGGAAAT+TGG - Chr8:13926270-13926289 None:intergenic 35.0%
TTAAGAAGTGAAGCTCTTCT+TGG - Chr8:13927193-13927212 None:intergenic 35.0%
TTAGCTAAGGCCTAATTGTT+CGG + Chr8:13926331-13926350 MsG0880042776.01.T01:intron 35.0%
TTATAACAAAGTGGCGCAAT+TGG + Chr8:13925997-13926016 MsG0880042776.01.T01:intron 35.0%
TTTATTGTGAGGTTGAGATC+TGG - Chr8:13926614-13926633 None:intergenic 35.0%
TTTGGGAAAATGGAACCTAA+AGG + Chr8:13925331-13925350 MsG0880042776.01.T01:CDS 35.0%
! ATCGTCAATTGTGGAGTTTT+AGG - Chr8:13926816-13926835 None:intergenic 35.0%
! ATTTTCAGAGGCTAATTTGG+TGG - Chr8:13926910-13926929 None:intergenic 35.0%
! TAGCTTAGGTCGAAATGTTT+TGG + Chr8:13926031-13926050 MsG0880042776.01.T01:intron 35.0%
! TGGATTTTCAGAGGCTAATT+TGG - Chr8:13926913-13926932 None:intergenic 35.0%
!! CGTTTTGATCTTCTAGTCTA+AGG - Chr8:13926278-13926297 None:intergenic 35.0%
!! TCCTTGTTCGATTGTTTCTA+AGG - Chr8:13927015-13927034 None:intergenic 35.0%
!! TCTTTTGAGTCAGTTCTTGA+AGG + Chr8:13925273-13925292 MsG0880042776.01.T01:CDS 35.0%
!!! CTGATTGTGTTTTTTGGTTG+TGG + Chr8:13925609-13925628 MsG0880042776.01.T01:intron 35.0%
AACATGCAAAACTCAGATGG+GGG + Chr8:13925665-13925684 MsG0880042776.01.T01:CDS 40.0%
AGACATCTAATGACAAGTGG+TGG - Chr8:13925969-13925988 None:intergenic 40.0%
AGTCTAAGGGAAATTGGGTT+CGG - Chr8:13926264-13926283 None:intergenic 40.0%
ATGATCTCAGTTGCATTCGT+AGG - Chr8:13926879-13926898 None:intergenic 40.0%
CAACATGCAAAACTCAGATG+GGG + Chr8:13925664-13925683 MsG0880042776.01.T01:CDS 40.0%
CACAATCAGCAAACTTTCAC+AGG - Chr8:13925598-13925617 None:intergenic 40.0%
CCAACATGCAAAACTCAGAT+GGG + Chr8:13925663-13925682 MsG0880042776.01.T01:CDS 40.0%
GAACAATTAGGCCTTAGCTA+AGG - Chr8:13926332-13926351 None:intergenic 40.0%
GATTCTACACCTGCTTTCTT+TGG + Chr8:13925313-13925332 MsG0880042776.01.T01:CDS 40.0%
GCCTTAGAAACAATCGAACA+AGG + Chr8:13927011-13927030 MsG0880042776.01.T01:CDS 40.0%
GTAGTACTTGAGTTCGATCT+TGG + Chr8:13926193-13926212 MsG0880042776.01.T01:intron 40.0%
TACGAATGCAACTGAGATCA+TGG + Chr8:13926878-13926897 MsG0880042776.01.T01:CDS 40.0%
TACTTGAGTTCGATCTTGGT+TGG + Chr8:13926197-13926216 MsG0880042776.01.T01:intron 40.0%
TAGCTAAGGCCTAATTGTTC+GGG + Chr8:13926332-13926351 MsG0880042776.01.T01:intron 40.0%
TTAGCTAATACTGTGTCGGA+TGG + Chr8:13925196-13925215 MsG0880042776.01.T01:CDS 40.0%
! AAATTAGGTTAGTCATGGGC+TGG + Chr8:13925894-13925913 MsG0880042776.01.T01:intron 40.0%
! ACCTGCTTTCTTTGGGAAAA+TGG + Chr8:13925321-13925340 MsG0880042776.01.T01:CDS 40.0%
! TCCATTTTCCCAAAGAAAGC+AGG - Chr8:13925325-13925344 None:intergenic 40.0%
! TCTAAGGCAGTGTTTGTTTG+AGG - Chr8:13926999-13927018 None:intergenic 40.0%
!!! GTGATCAATTTTGGTTGGGA+AGG - Chr8:13926545-13926564 None:intergenic 40.0%
CGAGTACTACCCGAACAATT+AGG - Chr8:13926344-13926363 None:intergenic 45.0%
GCCAACATGCAAAACTCAGA+TGG + Chr8:13925662-13925681 MsG0880042776.01.T01:CDS 45.0%
GGAAACCAAGCCAAATGTTC+AGG + Chr8:13927032-13927051 MsG0880042776.01.T01:CDS 45.0%
GTCGAGACTGAATTTCACTG+TGG + Chr8:13926430-13926449 MsG0880042776.01.T01:intron 45.0%
TGAATCTCTTCCTCAGCTTG+TGG + Chr8:13925712-13925731 MsG0880042776.01.T01:CDS 45.0%
TGCAACTGAGATCATGGAGT+TGG + Chr8:13926884-13926903 MsG0880042776.01.T01:CDS 45.0%
! CAAGGATTTTCCACAAGCTG+AGG - Chr8:13925725-13925744 None:intergenic 45.0%
! CCCATCTGAGTTTTGCATGT+TGG - Chr8:13925666-13925685 None:intergenic 45.0%
! TGGTTAATGCGCGTTAGCTT+AGG + Chr8:13926017-13926036 MsG0880042776.01.T01:intron 45.0%
! TTCAGCGCTTGGATTTTCAG+AGG - Chr8:13926922-13926941 None:intergenic 45.0%
!!! TATGAAATTTTAATTTTTTT+TGG + Chr8:13925404-13925423 MsG0880042776.01.T01:intron 5.0%
CTAATACTGTGTCGGATGGC+CGG + Chr8:13925200-13925219 MsG0880042776.01.T01:CDS 50.0%
TGTTGCAGGGTCATTGCTAG+AGG + Chr8:13927337-13927356 MsG0880042776.01.T01:intron 50.0%
!! TTGGTTCTGCGCCTTAGCTA+AGG + Chr8:13926318-13926337 MsG0880042776.01.T01:intron 50.0%
ACTAGTGACCGGTGCACTTG+GGG - Chr8:13926952-13926971 None:intergenic 55.0%
AGAAAACCCCCCAAGTGCAC+CGG + Chr8:13926941-13926960 MsG0880042776.01.T01:CDS 55.0%
CACTAGTGACCGGTGCACTT+GGG - Chr8:13926953-13926972 None:intergenic 55.0%
GAACTTCTCCGGTGCCTTAC+CGG - Chr8:13925233-13925252 None:intergenic 55.0%
TCACTAGTGACCGGTGCACT+TGG - Chr8:13926954-13926973 None:intergenic 55.0%
CTAGTGACCGGTGCACTTGG+GGG - Chr8:13926951-13926970 None:intergenic 60.0%
GAGACTCACCGGTAAGGCAC+CGG + Chr8:13925222-13925241 MsG0880042776.01.T01:CDS 60.0%
GTGCCTTACCGGTGAGTCTC+CGG - Chr8:13925222-13925241 None:intergenic 60.0%
TAGTGACCGGTGCACTTGGG+GGG - Chr8:13926950-13926969 None:intergenic 60.0%
! GGGGGGTTTTCTTCAGCGCT+TGG - Chr8:13926933-13926952 None:intergenic 60.0%
TCGGATGGCCGGAGACTCAC+CGG + Chr8:13925211-13925230 MsG0880042776.01.T01:CDS 65.0%
TGGCCGGAGACTCACCGGTA+AGG + Chr8:13925216-13925235 MsG0880042776.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 13925187 13927453 13925187 ID=MsG0880042776.01;Name=MsG0880042776.01
Chr8 mRNA 13925187 13927453 13925187 ID=MsG0880042776.01.T01;Parent=MsG0880042776.01;Name=MsG0880042776.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|5|0|235
Chr8 exon 13925187 13925352 13925187 ID=MsG0880042776.01.T01:exon:13355;Parent=MsG0880042776.01.T01
Chr8 exon 13925642 13925765 13925642 ID=MsG0880042776.01.T01:exon:13356;Parent=MsG0880042776.01.T01
Chr8 exon 13926803 13927053 13926803 ID=MsG0880042776.01.T01:exon:13357;Parent=MsG0880042776.01.T01
Chr8 exon 13927179 13927236 13927179 ID=MsG0880042776.01.T01:exon:13358;Parent=MsG0880042776.01.T01
Chr8 exon 13927345 13927453 13927345 ID=MsG0880042776.01.T01:exon:13359;Parent=MsG0880042776.01.T01
Chr8 CDS 13925187 13925352 13925187 ID=MsG0880042776.01.T01:cds;Parent=MsG0880042776.01.T01
Chr8 CDS 13925642 13925765 13925642 ID=MsG0880042776.01.T01:cds;Parent=MsG0880042776.01.T01
Chr8 CDS 13926803 13927053 13926803 ID=MsG0880042776.01.T01:cds;Parent=MsG0880042776.01.T01
Chr8 CDS 13927179 13927236 13927179 ID=MsG0880042776.01.T01:cds;Parent=MsG0880042776.01.T01
Chr8 CDS 13927345 13927453 13927345 ID=MsG0880042776.01.T01:cds;Parent=MsG0880042776.01.T01
Gene Sequence

>MsG0880042776.01.T01

ATGTCAAATTTAGCTAATACTGTGTCGGATGGCCGGAGACTCACCGGTAAGGCACCGGAGAAGTTCAAATTTTCACAGACTTGTAGTCTTTTGAGTCAGTTCTTGAAGGAAAAGAGAATTTCTGGTGATTCTACACCTGCTTTCTTTGGGAAAATGGAACCTAAAGCAAGTACAAAGGATTTGTTAGCCAACATGCAAAACTCAGATGGGGGTTTGAGACTAAATGCATCTGCTATTGAATCTCTTCCTCAGCTTGTGGAAAATCCTTGCATTAAGAAGTTTGATACAAGATCAACAGATCCTAAAACTCCACAATTGACGATATTCTATTCTGGGAAAATGTTAGTATTTGACGCTTTTTCGCCTACGAATGCAACTGAGATCATGGAGTTGGCCACCAAATTAGCCTCTGAAAATCCAAGCGCTGAAGAAAACCCCCCAAGTGCACCGGTCACTAGTGAAAAATTAAAGGAGCCCGAAATTCCTCAAACAAACACTGCCTTAGAAACAATCGAACAAGGAAACCAAGCCAAATGTTCAGATATGAGATATCCAAGAAGAGCTTCACTTCTTAAATTTCTTGAGAAAAGAAAAGAAAGGGTCATTGCTAGAGGACCCTATCAAATTAATGGTCACAAAAATGAGGGTAGTAGTTCTGGAAGTGAACCTAAAGATAATTCTTCCGATCAATTCGACCTTAACTTATAG
Protein sequence

>MsG0880042776.01.T01

MSNLANTVSDGRRLTGKAPEKFKFSQTCSLLSQFLKEKRISGDSTPAFFGKMEPKASTKDLLANMQNSDGGLRLNASAIESLPQLVENPCIKKFDTRSTDPKTPQLTIFYSGKMLVFDAFSPTNATEIMELATKLASENPSAEENPPSAPVTSEKLKEPEIPQTNTALETIEQGNQAKCSDMRYPRRASLLKFLEKRKERVIARGPYQINGHKNEGSSSGSEPKDNSSDQFDLNL*