AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042809.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042809.01.T01 MTR_8g022790 97.619 336 8 0 1 336 26 361 0.0 679
MsG0880042809.01.T01 MTR_8g031420 56.305 341 133 4 5 335 28 362 8.88e-139 398
MsG0880042809.01.T01 MTR_8g031430 56.305 341 133 4 5 335 30 364 1.43e-135 390
MsG0880042809.01.T01 MTR_8g031390 55.030 338 135 5 5 332 30 360 5.74e-128 371
MsG0880042809.01.T01 MTR_8g031400 52.786 341 145 4 5 335 30 364 1.50e-127 369
MsG0880042809.01.T01 MTR_8g022810 49.706 340 158 4 8 335 37 375 2.10e-114 337
MsG0880042809.01.T01 MTR_8g031390 56.207 290 113 4 5 287 30 312 1.78e-110 324
MsG0880042809.01.T01 MTR_2g044100 50.898 334 152 4 12 334 43 375 2.02e-109 325
MsG0880042809.01.T01 MTR_8g022810 43.529 340 126 5 8 335 37 322 5.36e-87 265
MsG0880042809.01.T01 MTR_3g005650 34.835 333 204 5 12 336 30 357 1.30e-59 195
MsG0880042809.01.T01 MTR_5g022630 34.375 320 196 7 12 319 43 360 1.55e-57 190
MsG0880042809.01.T01 MTR_8g079050 34.971 346 200 11 11 336 36 376 6.50e-57 189
MsG0880042809.01.T01 MTR_5g093090 33.728 338 202 7 12 333 28 359 1.29e-56 188
MsG0880042809.01.T01 MTR_8g075230 35.714 322 187 8 12 319 36 351 5.72e-56 186
MsG0880042809.01.T01 MTR_8g074570 34.682 346 196 10 8 333 34 369 1.16e-55 186
MsG0880042809.01.T01 MTR_8g014910 35.168 327 196 8 12 325 32 355 2.60e-55 184
MsG0880042809.01.T01 MTR_2g033930 33.918 342 197 10 12 335 32 362 9.44e-55 183
MsG0880042809.01.T01 MTR_3g052490 33.621 348 203 10 8 336 28 366 1.20e-53 180
MsG0880042809.01.T01 MTR_1g079530 34.111 343 192 13 12 336 29 355 2.43e-53 179
MsG0880042809.01.T01 MTR_2g033920 33.529 340 209 9 9 335 32 367 1.17e-52 177
MsG0880042809.01.T01 MTR_7g116520 32.448 339 209 8 12 336 34 366 1.47e-52 177
MsG0880042809.01.T01 MTR_3g464730 34.891 321 188 10 9 314 25 339 2.01e-52 177
MsG0880042809.01.T01 MTR_5g084770 33.762 311 193 6 12 311 28 336 2.49e-52 176
MsG0880042809.01.T01 MTR_3g082830 35.535 318 183 10 12 314 38 348 2.87e-52 176
MsG0880042809.01.T01 MTR_3g052480 33.333 351 201 10 8 336 29 368 9.44e-52 175
MsG0880042809.01.T01 MTR_2g084585 34.395 314 192 6 12 314 30 340 1.27e-51 174
MsG0880042809.01.T01 MTR_8g074580 31.865 386 194 11 8 333 40 416 1.93e-51 176
MsG0880042809.01.T01 MTR_2g461580 31.765 340 205 8 5 333 24 347 2.00e-51 174
MsG0880042809.01.T01 MTR_4g087985 34.154 325 181 11 9 309 33 348 3.85e-51 174
MsG0880042809.01.T01 MTR_5g022640 32.812 320 200 7 12 319 43 359 4.81e-51 173
MsG0880042809.01.T01 MTR_4g035353 30.946 349 223 8 1 336 20 363 2.92e-50 171
MsG0880042809.01.T01 MTR_4g122200 32.749 342 203 11 12 335 35 367 3.40e-50 171
MsG0880042809.01.T01 MTR_2g100620 33.851 322 197 8 12 320 31 349 4.84e-50 171
MsG0880042809.01.T01 MTR_5g084790 35.474 327 195 8 3 317 23 345 5.17e-50 171
MsG0880042809.01.T01 MTR_7g116570 31.176 340 218 7 9 336 31 366 5.17e-50 171
MsG0880042809.01.T01 MTR_1g069175 31.014 345 208 12 12 336 33 367 8.43e-50 170
MsG0880042809.01.T01 MTR_3g052580 31.503 346 212 9 8 336 24 361 9.21e-50 171
MsG0880042809.01.T01 MTR_3g052580 31.503 346 212 9 8 336 23 360 1.43e-49 171
MsG0880042809.01.T01 MTR_4g056160 36.164 318 184 8 12 314 27 340 2.92e-49 168
MsG0880042809.01.T01 MTR_3g435540 32.907 313 194 7 14 314 25 333 3.21e-49 169
MsG0880042809.01.T01 MTR_5g074270 33.851 322 199 7 6 315 27 346 5.15e-49 168
MsG0880042809.01.T01 MTR_1g025760 35.161 310 181 11 12 307 80 383 7.19e-49 169
MsG0880042809.01.T01 MTR_5g084750 32.716 324 199 10 1 310 18 336 9.97e-49 167
MsG0880042809.01.T01 MTR_5g078210 33.439 314 191 9 14 315 27 334 1.00e-48 167
MsG0880042809.01.T01 MTR_3g021460 32.530 332 199 8 12 333 31 347 1.28e-48 167
MsG0880042809.01.T01 MTR_3g098270 33.432 338 208 7 12 335 34 368 2.28e-48 167
MsG0880042809.01.T01 MTR_3g024510 32.537 335 210 9 14 336 40 370 2.73e-48 166
MsG0880042809.01.T01 MTR_1g024890 31.563 339 212 8 12 336 32 364 5.35e-48 166
MsG0880042809.01.T01 MTR_2g015080 34.049 326 188 10 6 309 32 352 6.43e-48 165
MsG0880042809.01.T01 MTR_0009s0250 34.062 320 182 11 8 314 29 332 7.90e-48 164
MsG0880042809.01.T01 MTR_0565s0010 32.153 339 207 11 14 336 34 365 8.03e-48 165
MsG0880042809.01.T01 MTR_2g017925 35.329 334 194 11 12 335 33 354 9.53e-48 165
MsG0880042809.01.T01 MTR_3g114090 34.416 308 190 8 12 309 36 341 1.19e-47 164
MsG0880042809.01.T01 MTR_1g025780 35.161 310 183 9 12 309 41 344 1.82e-47 164
MsG0880042809.01.T01 MTR_7g116510 29.885 348 225 8 3 336 16 358 3.58e-47 163
MsG0880042809.01.T01 MTR_1g079540 31.105 344 215 9 7 336 28 363 4.10e-47 163
MsG0880042809.01.T01 MTR_4g108690 31.949 313 197 7 14 314 29 337 4.24e-47 163
MsG0880042809.01.T01 MTR_7g008060 32.047 337 202 10 9 334 30 350 8.31e-47 162
MsG0880042809.01.T01 MTR_1g025680 34.516 310 187 9 12 309 34 339 8.49e-46 162
MsG0880042809.01.T01 MTR_4g056280 35.048 311 188 6 12 311 30 337 9.66e-46 159
MsG0880042809.01.T01 MTR_7g116500 30.294 340 211 9 12 334 33 363 1.02e-45 159
MsG0880042809.01.T01 MTR_6g021530 30.357 336 217 7 14 336 31 362 8.40e-45 157
MsG0880042809.01.T01 MTR_8g075220 30.061 326 205 9 12 319 40 360 1.77e-44 156
MsG0880042809.01.T01 MTR_1g025720 32.177 317 198 9 12 316 37 348 2.82e-44 155
MsG0880042809.01.T01 MTR_5g009100 32.544 338 201 13 14 333 48 376 2.97e-44 156
MsG0880042809.01.T01 MTR_7g116870 32.571 350 181 11 12 323 33 365 4.62e-44 155
MsG0880042809.01.T01 MTR_2g017955 34.125 337 199 12 12 335 33 359 8.22e-44 155
MsG0880042809.01.T01 MTR_1g025700 33.117 308 193 8 12 309 50 354 2.19e-43 153
MsG0880042809.01.T01 MTR_4g019880 30.409 342 214 10 12 336 32 366 2.33e-43 153
MsG0880042809.01.T01 MTR_3g023220 32.335 334 202 11 12 335 33 352 5.32e-43 152
MsG0880042809.01.T01 MTR_3g114120 32.704 318 197 8 12 317 47 359 1.28e-42 151
MsG0880042809.01.T01 MTR_8g074560 30.484 351 209 12 9 335 28 367 2.22e-42 150
MsG0880042809.01.T01 MTR_8g075200 29.653 317 209 7 12 317 41 354 3.11e-42 151
MsG0880042809.01.T01 MTR_8g028160 31.579 361 197 9 13 336 37 384 7.24e-42 150
MsG0880042809.01.T01 MTR_8g087890 30.499 341 209 11 14 336 33 363 8.22e-42 149
MsG0880042809.01.T01 MTR_8g087870 31.437 334 209 9 12 336 29 351 1.25e-41 148
MsG0880042809.01.T01 MTR_2g017875 31.378 341 205 12 12 336 34 361 9.32e-41 146
MsG0880042809.01.T01 MTR_1g025910 29.412 306 200 8 17 311 41 341 1.12e-40 146
MsG0880042809.01.T01 MTR_2g017965 30.473 338 209 11 13 335 34 360 1.79e-38 140
MsG0880042809.01.T01 MTR_3g005660 29.464 336 217 9 13 333 37 367 2.09e-38 140
MsG0880042809.01.T01 MTR_5g093090 32.714 269 164 6 12 269 28 290 2.13e-37 136
MsG0880042809.01.T01 MTR_2g015590 31.065 338 200 10 10 320 29 360 8.07e-37 136
MsG0880042809.01.T01 MTR_7g033155 27.945 365 206 8 7 323 33 388 1.28e-36 136
MsG0880042809.01.T01 MTR_7g087190 31.700 347 194 11 12 323 43 381 1.48e-36 136
MsG0880042809.01.T01 MTR_2g033920 34.328 268 165 8 9 269 32 295 2.32e-36 133
MsG0880042809.01.T01 MTR_5g078210 32.443 262 167 7 14 269 27 284 9.15e-36 132
MsG0880042809.01.T01 MTR_1g030220 31.897 348 182 10 12 320 40 371 9.51e-36 134
MsG0880042809.01.T01 MTR_7g113860 30.000 350 187 10 12 320 29 361 1.29e-35 133
MsG0880042809.01.T01 MTR_8g089805 29.480 346 196 10 12 320 40 374 1.18e-34 130
MsG0880042809.01.T01 MTR_5g083040 29.560 318 201 10 9 308 29 341 1.47e-34 130
MsG0880042809.01.T01 MTR_1g092750 29.179 329 196 9 13 324 41 349 2.64e-34 129
MsG0880042809.01.T01 MTR_7g111780 30.488 328 199 9 8 317 32 348 3.66e-34 129
MsG0880042809.01.T01 MTR_7g104220 34.185 313 167 16 13 307 43 334 4.54e-34 128
MsG0880042809.01.T01 MTR_7g113860 29.714 350 188 11 12 320 35 367 5.02e-34 129
MsG0880042809.01.T01 MTR_1g030275 29.912 341 196 8 12 320 39 368 5.72e-34 129
MsG0880042809.01.T01 MTR_7g033150 27.809 356 197 9 12 323 35 374 1.67e-33 127
MsG0880042809.01.T01 MTR_2g017915 29.674 337 191 11 13 335 34 338 1.60e-32 124
MsG0880042809.01.T01 MTR_1g092690 28.923 325 184 11 8 307 39 341 1.77e-32 124
MsG0880042809.01.T01 MTR_1g092760 30.696 316 183 11 8 307 35 330 1.93e-32 124
MsG0880042809.01.T01 MTR_1g030268 31.195 343 189 11 12 320 40 369 5.44e-32 123
MsG0880042809.01.T01 MTR_2g015630 29.565 345 203 11 17 333 36 368 5.58e-32 123
MsG0880042809.01.T01 MTR_5g087690 28.037 321 207 8 12 319 50 359 1.11e-31 122
MsG0880042809.01.T01 MTR_1g082390 29.086 361 207 11 1 325 20 367 3.07e-31 121
MsG0880042809.01.T01 MTR_2g015650 28.977 352 214 11 1 324 20 363 3.34e-31 121
MsG0880042809.01.T01 MTR_1g060500 31.546 317 177 12 13 307 41 339 5.72e-31 120
MsG0880042809.01.T01 MTR_1g060490 29.773 309 185 12 13 307 38 328 6.36e-31 120
MsG0880042809.01.T01 MTR_7g033165 30.347 346 193 11 12 321 33 366 7.85e-31 120
MsG0880042809.01.T01 MTR_4g104240 26.126 333 217 6 13 323 40 365 1.11e-30 120
MsG0880042809.01.T01 MTR_2g087292 29.167 312 141 9 7 314 28 263 1.23e-30 117
MsG0880042809.01.T01 MTR_1g030340 30.058 346 192 10 12 320 42 374 2.18e-30 119
MsG0880042809.01.T01 MTR_1g030230 29.446 343 197 9 12 320 32 363 3.03e-30 119
MsG0880042809.01.T01 MTR_6g007090 27.778 342 211 7 9 323 36 368 4.30e-30 118
MsG0880042809.01.T01 MTR_6g007100 30.357 336 193 13 12 323 33 351 6.34e-30 117
MsG0880042809.01.T01 MTR_2g015580 28.986 345 209 10 8 324 43 379 6.88e-30 118
MsG0880042809.01.T01 MTR_6g007095 30.233 344 194 10 12 323 41 370 1.04e-29 120
MsG0880042809.01.T01 MTR_6g007095 27.181 298 199 5 40 323 393 686 1.37e-24 105
MsG0880042809.01.T01 MTR_2g043980 30.769 338 194 12 4 320 28 346 1.28e-29 116
MsG0880042809.01.T01 MTR_2g015590 31.408 277 167 8 10 269 29 299 8.75e-28 111
MsG0880042809.01.T01 MTR_2g015670 28.571 350 204 11 1 324 20 349 1.75e-27 110
MsG0880042809.01.T01 MTR_2g079080 27.893 337 215 11 1 320 19 344 8.76e-27 108
MsG0880042809.01.T01 MTR_2g017925 33.333 240 143 8 103 335 22 251 9.15e-27 107
MsG0880042809.01.T01 MTR_2g079090 27.893 337 215 11 1 320 19 344 1.28e-26 108
MsG0880042809.01.T01 MTR_0029s0050 27.893 337 215 11 1 320 19 344 1.31e-26 108
MsG0880042809.01.T01 MTR_0029s0100 27.893 337 215 11 1 320 19 344 3.30e-26 107
MsG0880042809.01.T01 MTR_1g092740 27.885 312 187 9 13 307 39 329 1.45e-25 105
MsG0880042809.01.T01 MTR_8g038680 26.331 357 220 10 1 323 15 362 6.32e-25 103
MsG0880042809.01.T01 MTR_7g033165 31.343 268 150 8 12 257 33 288 1.08e-24 102
MsG0880042809.01.T01 MTR_3g448360 26.912 353 213 13 1 321 18 357 1.30e-24 103
MsG0880042809.01.T01 MTR_3g463930 27.298 359 203 16 4 320 38 380 1.39e-24 103
MsG0880042809.01.T01 MTR_1g030268 31.408 277 158 8 12 269 40 303 1.77e-24 102
MsG0880042809.01.T01 MTR_3g463960 26.836 354 204 15 4 320 38 373 2.02e-24 102
MsG0880042809.01.T01 MTR_3g463950 26.836 354 204 15 4 320 38 373 2.02e-24 102
MsG0880042809.01.T01 MTR_3g463970 26.836 354 204 15 4 320 38 373 2.02e-24 102
MsG0880042809.01.T01 MTR_3g463940 26.836 354 204 15 4 320 38 373 2.02e-24 102
MsG0880042809.01.T01 MTR_0127s0040 28.689 244 157 8 104 336 1 238 6.42e-24 98.6
MsG0880042809.01.T01 MTR_1g079590 33.880 183 112 5 12 187 31 211 2.78e-22 93.6
MsG0880042809.01.T01 MTR_3g069780 28.448 348 211 13 1 320 19 356 3.51e-22 96.3
MsG0880042809.01.T01 MTR_3g438030 28.448 348 211 13 1 320 19 356 7.03e-22 95.5
MsG0880042809.01.T01 MTR_1g060520 27.215 316 156 12 13 307 41 303 2.26e-21 93.2
MsG0880042809.01.T01 MTR_7g111780 29.435 248 151 6 87 317 9 249 2.30e-21 92.0
MsG0880042809.01.T01 MTR_1108s0010 29.187 209 124 4 112 311 3 196 2.73e-21 90.9
MsG0880042809.01.T01 MTR_7g113860 26.756 299 165 9 63 320 8 293 1.76e-20 90.5
MsG0880042809.01.T01 MTR_3g069520 27.119 354 208 13 1 321 19 355 1.82e-20 91.3
MsG0880042809.01.T01 MTR_8g012540 25.000 308 203 7 1 288 15 314 4.67e-20 90.1
MsG0880042809.01.T01 MTR_5g093090 33.898 177 104 5 12 177 28 202 8.48e-20 86.7
MsG0880042809.01.T01 MTR_5g074210 33.099 142 88 3 180 315 62 202 1.31e-19 86.3
MsG0880042809.01.T01 MTR_8g089805 25.667 300 180 8 58 320 13 306 2.92e-19 87.4
MsG0880042809.01.T01 MTR_2g018015 34.653 202 113 8 12 201 36 230 1.06e-18 85.5
MsG0880042809.01.T01 MTR_1g030265 26.621 293 169 8 65 320 53 336 1.31e-18 85.9
MsG0880042809.01.T01 MTR_2g043990 29.825 285 145 10 4 269 90 338 9.07e-17 80.5
MsG0880042809.01.T01 MTR_4g036375 34.483 145 88 4 12 151 30 172 4.89e-16 75.9
MsG0880042809.01.T01 MTR_6g049230 40.541 111 63 2 171 281 63 170 8.52e-16 75.1
MsG0880042809.01.T01 MTR_4g036385 35.922 103 60 1 217 313 21 123 2.38e-14 69.7
MsG0880042809.01.T01 MTR_2g017895 24.101 278 171 12 72 336 17 267 2.52e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042809.01.T01 AT1G53920 51.176 340 148 6 12 336 48 384 3.39e-120 352
MsG0880042809.01.T01 AT5G40990 49.711 346 160 4 4 336 29 373 6.43e-120 350
MsG0880042809.01.T01 AT1G53940 48.837 344 162 4 6 336 33 375 2.33e-114 336
MsG0880042809.01.T01 AT3G14225 45.930 344 172 4 6 336 31 373 4.08e-108 320
MsG0880042809.01.T01 AT3G14225 45.690 348 171 5 6 336 31 377 4.23e-107 318
MsG0880042809.01.T01 AT1G53990 45.954 346 166 5 4 336 27 364 5.40e-103 307
MsG0880042809.01.T01 AT1G53940 48.507 268 135 2 6 271 33 299 3.43e-86 262
MsG0880042809.01.T01 AT1G71120 33.531 337 197 7 12 333 31 355 8.01e-61 199
MsG0880042809.01.T01 AT5G08460 33.828 337 205 9 12 333 49 382 8.41e-56 186
MsG0880042809.01.T01 AT2G04570 35.650 331 193 9 12 330 28 350 1.23e-55 185
MsG0880042809.01.T01 AT1G54030 34.557 327 191 10 13 334 53 361 2.73e-55 186
MsG0880042809.01.T01 AT4G26790 35.938 320 185 10 9 314 26 339 1.09e-54 182
MsG0880042809.01.T01 AT4G26790 35.938 320 185 10 9 314 26 339 1.09e-54 182
MsG0880042809.01.T01 AT5G41890 35.838 346 190 12 14 333 33 372 9.95e-54 181
MsG0880042809.01.T01 AT1G71691 33.837 331 205 6 12 333 55 380 8.46e-53 179
MsG0880042809.01.T01 AT1G20132 32.817 323 201 8 8 318 57 375 8.89e-53 178
MsG0880042809.01.T01 AT3G14820 36.859 312 177 10 12 311 32 335 2.72e-52 176
MsG0880042809.01.T01 AT5G45960 37.195 328 176 14 8 314 41 359 2.82e-52 177
MsG0880042809.01.T01 AT5G15720 32.544 338 212 7 12 336 30 364 3.96e-52 176
MsG0880042809.01.T01 AT1G20120 34.347 329 189 11 12 322 78 397 4.95e-52 177
MsG0880042809.01.T01 AT2G23540 33.811 349 200 12 11 336 47 387 7.90e-52 176
MsG0880042809.01.T01 AT1G06990 35.032 314 181 12 12 309 37 343 9.95e-52 175
MsG0880042809.01.T01 AT3G50400 33.807 352 203 13 8 336 30 374 3.20e-51 174
MsG0880042809.01.T01 AT5G42170 33.438 320 193 10 13 319 51 363 1.44e-50 172
MsG0880042809.01.T01 AT2G40250 33.542 319 192 11 12 314 36 350 1.07e-48 167
MsG0880042809.01.T01 AT5G45950 31.595 326 203 10 2 315 28 345 1.13e-48 167
MsG0880042809.01.T01 AT2G42990 33.229 319 189 10 9 311 25 335 1.23e-48 167
MsG0880042809.01.T01 AT5G37690 32.907 313 192 8 14 314 29 335 1.89e-48 166
MsG0880042809.01.T01 AT3G53100 32.492 317 194 9 12 314 29 339 2.73e-48 166
MsG0880042809.01.T01 AT5G33370 31.858 339 211 8 12 336 30 362 5.41e-48 166
MsG0880042809.01.T01 AT1G29660 33.036 336 207 10 14 336 34 364 7.01e-48 165
MsG0880042809.01.T01 AT5G03820 33.962 318 190 10 12 314 33 345 8.43e-48 165
MsG0880042809.01.T01 AT3G16370 32.919 322 193 10 12 317 30 344 1.51e-47 164
MsG0880042809.01.T01 AT5G22810 34.700 317 190 8 12 314 34 347 3.42e-47 163
MsG0880042809.01.T01 AT5G03820 33.962 318 190 10 12 314 61 373 3.77e-47 164
MsG0880042809.01.T01 AT4G28780 29.586 338 220 8 12 336 31 363 1.64e-46 162
MsG0880042809.01.T01 AT1G75890 32.609 322 199 9 12 317 47 366 1.75e-46 161
MsG0880042809.01.T01 AT1G20130 32.317 328 193 11 12 317 184 504 2.17e-46 164
MsG0880042809.01.T01 AT1G20130 32.317 328 193 11 12 317 204 524 3.15e-46 164
MsG0880042809.01.T01 AT1G75890 32.609 322 199 9 12 317 76 395 3.35e-46 161
MsG0880042809.01.T01 AT1G20135 33.438 317 190 10 3 309 17 322 4.87e-46 159
MsG0880042809.01.T01 AT3G14210 32.440 336 198 11 12 333 36 356 9.18e-46 160
MsG0880042809.01.T01 AT1G54010 31.642 335 198 12 13 333 37 354 2.06e-45 159
MsG0880042809.01.T01 AT3G04290 30.267 337 215 8 9 331 26 356 2.51e-45 159
MsG0880042809.01.T01 AT1G54000 32.036 334 200 11 12 333 36 354 2.54e-45 159
MsG0880042809.01.T01 AT1G58430 32.609 322 195 10 12 317 35 350 3.76e-45 158
MsG0880042809.01.T01 AT1G75890 31.343 335 199 9 12 317 47 379 6.10e-45 158
MsG0880042809.01.T01 AT5G03810 31.962 316 198 7 12 314 30 341 7.28e-45 157
MsG0880042809.01.T01 AT5G18430 31.487 343 209 10 12 336 28 362 7.31e-45 157
MsG0880042809.01.T01 AT1G74460 31.962 316 199 7 14 317 25 336 8.26e-45 157
MsG0880042809.01.T01 AT1G59406 32.692 312 191 10 12 311 30 334 1.09e-44 156
MsG0880042809.01.T01 AT1G59030 32.692 312 191 10 12 311 30 334 1.09e-44 156
MsG0880042809.01.T01 AT1G58725 32.692 312 191 10 12 311 30 334 1.09e-44 156
MsG0880042809.01.T01 AT1G71250 30.357 336 214 8 12 333 41 370 1.37e-44 157
MsG0880042809.01.T01 AT5G37690 32.803 314 183 10 14 314 29 327 8.06e-44 154
MsG0880042809.01.T01 AT1G54020 31.928 332 198 12 13 334 34 347 1.25e-43 154
MsG0880042809.01.T01 AT5G63170 32.803 314 175 13 12 309 28 321 1.46e-43 153
MsG0880042809.01.T01 AT2G19050 30.564 337 200 10 14 336 33 349 1.52e-43 153
MsG0880042809.01.T01 AT2G19060 32.099 324 184 12 14 320 32 336 1.71e-43 153
MsG0880042809.01.T01 AT1G75900 30.960 323 200 9 12 319 43 357 5.94e-43 152
MsG0880042809.01.T01 AT3G14220 31.045 335 200 14 13 333 33 350 6.66e-43 152
MsG0880042809.01.T01 AT5G55050 32.558 344 199 13 13 333 40 373 1.08e-42 152
MsG0880042809.01.T01 AT1G28640 30.904 343 200 10 8 321 31 365 2.14e-42 151
MsG0880042809.01.T01 AT5G45670 30.612 343 201 10 14 333 31 359 2.86e-42 150
MsG0880042809.01.T01 AT4G18970 31.214 346 201 11 14 336 30 361 3.35e-42 150
MsG0880042809.01.T01 AT2G03980 29.781 319 198 9 12 314 43 351 6.78e-42 149
MsG0880042809.01.T01 AT2G03980 29.781 319 198 9 12 314 43 351 6.78e-42 149
MsG0880042809.01.T01 AT2G03980 29.781 319 198 9 12 314 43 351 6.78e-42 149
MsG0880042809.01.T01 AT2G03980 29.781 319 198 9 12 314 43 351 6.78e-42 149
MsG0880042809.01.T01 AT1G29670 30.678 339 212 12 13 336 33 363 7.67e-42 149
MsG0880042809.01.T01 AT2G30310 30.745 322 201 10 12 317 34 349 9.64e-42 149
MsG0880042809.01.T01 AT4G30140 30.488 328 204 10 14 333 35 346 1.18e-41 148
MsG0880042809.01.T01 AT4G18970 31.214 346 201 11 14 336 30 361 1.41e-41 149
MsG0880042809.01.T01 AT1G75880 32.288 319 200 8 12 317 52 367 2.21e-41 148
MsG0880042809.01.T01 AT2G30220 31.366 322 199 10 12 317 33 348 2.90e-41 147
MsG0880042809.01.T01 AT4G01130 31.268 355 189 10 12 327 34 372 4.09e-41 148
MsG0880042809.01.T01 AT4G10950 29.032 341 217 11 12 335 71 403 4.20e-41 148
MsG0880042809.01.T01 AT1G29670 30.678 339 212 12 13 336 101 431 4.91e-41 149
MsG0880042809.01.T01 AT1G75880 32.075 318 201 8 12 317 52 366 1.19e-40 146
MsG0880042809.01.T01 AT2G24560 31.677 322 198 10 12 317 34 349 1.32e-40 146
MsG0880042809.01.T01 AT1G58520 32.063 315 182 12 12 311 30 327 4.23e-40 144
MsG0880042809.01.T01 AT1G58525 32.063 315 182 12 12 311 30 327 4.23e-40 144
MsG0880042809.01.T01 AT1G54030 35.484 248 140 8 12 257 52 281 2.97e-39 141
MsG0880042809.01.T01 AT1G75930 34.579 321 180 12 12 317 29 334 5.67e-39 141
MsG0880042809.01.T01 AT1G75920 32.476 311 196 9 12 315 29 332 7.44e-39 141
MsG0880042809.01.T01 AT4G10950 29.326 341 212 13 12 335 71 399 9.06e-39 142
MsG0880042809.01.T01 AT5G15720 33.459 266 166 6 12 269 30 292 9.33e-39 140
MsG0880042809.01.T01 AT2G19010 29.305 331 208 10 13 333 31 345 1.99e-38 140
MsG0880042809.01.T01 AT1G28650 30.612 343 201 11 8 321 33 367 3.21e-38 140
MsG0880042809.01.T01 AT2G19010 29.217 332 209 10 12 333 60 375 5.28e-38 139
MsG0880042809.01.T01 AT2G31540 31.366 322 199 10 12 317 35 350 1.25e-37 138
MsG0880042809.01.T01 AT3G43570 30.449 312 169 11 12 311 30 305 1.53e-37 137
MsG0880042809.01.T01 AT1G71691 33.588 262 165 5 12 269 55 311 4.94e-37 135
MsG0880042809.01.T01 AT1G33811 30.655 336 215 12 13 333 35 367 5.93e-37 136
MsG0880042809.01.T01 AT1G71691 30.000 280 184 5 63 333 3 279 1.48e-36 133
MsG0880042809.01.T01 AT1G23500 32.915 319 190 13 12 320 35 339 2.35e-36 134
MsG0880042809.01.T01 AT2G27360 29.830 352 197 13 12 330 33 367 2.82e-36 135
MsG0880042809.01.T01 AT3G26430 31.792 346 188 11 12 320 31 365 7.11e-36 134
MsG0880042809.01.T01 AT1G75920 30.982 326 196 9 12 315 24 342 8.11e-36 133
MsG0880042809.01.T01 AT5G03610 32.188 320 181 11 7 308 38 339 1.04e-35 133
MsG0880042809.01.T01 AT1G73610 29.808 312 202 7 12 317 35 335 2.08e-35 132
MsG0880042809.01.T01 AT2G19050 31.746 252 149 6 14 256 33 270 2.25e-35 130
MsG0880042809.01.T01 AT1G75910 32.372 312 196 10 12 315 28 332 2.29e-35 132
MsG0880042809.01.T01 AT1G28660 30.000 340 205 11 8 320 31 364 6.53e-35 131
MsG0880042809.01.T01 AT1G54790 29.745 353 190 11 9 320 29 364 1.46e-34 130
MsG0880042809.01.T01 AT3G43550 32.319 263 167 7 12 269 30 286 2.15e-34 127
MsG0880042809.01.T01 AT3G09930 31.847 314 179 11 13 308 40 336 4.26e-34 128
MsG0880042809.01.T01 AT3G09930 31.847 314 179 11 13 308 40 336 4.26e-34 128
MsG0880042809.01.T01 AT1G28670 29.825 342 204 11 8 320 31 365 4.98e-34 129
MsG0880042809.01.T01 AT1G28580 28.529 340 210 10 8 320 33 366 5.46e-34 129
MsG0880042809.01.T01 AT5G15720 28.671 286 191 5 64 336 48 333 7.04e-34 127
MsG0880042809.01.T01 AT1G28660 30.000 340 204 12 8 320 31 363 2.04e-33 127
MsG0880042809.01.T01 AT5G33370 31.698 265 170 6 12 269 30 290 2.07e-33 126
MsG0880042809.01.T01 AT1G28600 28.994 338 202 11 12 320 31 359 8.28e-33 125
MsG0880042809.01.T01 AT1G28570 27.429 350 213 11 3 320 23 363 4.22e-32 124
MsG0880042809.01.T01 AT5G14450 29.738 343 197 9 12 320 41 373 6.09e-32 123
MsG0880042809.01.T01 AT1G31550 29.023 348 203 12 12 330 36 368 7.29e-32 123
MsG0880042809.01.T01 AT4G01130 32.258 279 154 7 12 269 34 298 7.91e-32 122
MsG0880042809.01.T01 AT1G28590 27.778 342 210 10 8 320 32 365 2.45e-31 122
MsG0880042809.01.T01 AT3G48460 28.363 342 196 12 13 321 39 364 6.38e-31 120
MsG0880042809.01.T01 AT1G75920 30.877 285 185 8 38 315 25 304 7.41e-31 119
MsG0880042809.01.T01 AT1G75920 29.545 308 178 8 12 315 29 301 7.99e-31 119
MsG0880042809.01.T01 AT1G67830 29.446 343 200 12 12 320 30 364 1.34e-30 119
MsG0880042809.01.T01 AT5G03600 30.247 324 196 8 7 319 9 313 1.45e-30 118
MsG0880042809.01.T01 AT5G45910 30.814 344 200 11 9 320 27 364 1.71e-30 119
MsG0880042809.01.T01 AT5G03600 30.990 313 186 8 7 308 44 337 2.25e-30 118
MsG0880042809.01.T01 AT2G24560 30.627 271 175 8 12 273 34 300 2.34e-29 115
MsG0880042809.01.T01 AT4G16230 37.321 209 119 8 5 204 22 227 3.71e-29 113
MsG0880042809.01.T01 AT3G27950 30.178 338 201 10 12 323 32 360 9.94e-29 114
MsG0880042809.01.T01 AT3G62280 27.864 323 213 6 9 317 33 349 2.50e-28 113
MsG0880042809.01.T01 AT1G31550 27.954 347 205 12 12 330 36 365 2.50e-28 113
MsG0880042809.01.T01 AT1G09390 29.102 323 199 8 12 314 37 349 2.89e-28 113
MsG0880042809.01.T01 AT1G54790 27.500 360 203 11 2 320 21 363 3.20e-28 113
MsG0880042809.01.T01 AT1G54020 29.151 271 167 9 73 334 7 261 3.22e-28 111
MsG0880042809.01.T01 AT1G54020 29.151 271 167 9 73 334 7 261 3.22e-28 111
MsG0880042809.01.T01 AT1G54020 29.151 271 167 9 73 334 7 261 3.22e-28 111
MsG0880042809.01.T01 AT3G05180 27.954 347 208 11 12 325 36 373 5.73e-28 112
MsG0880042809.01.T01 AT1G28610 26.513 347 213 12 12 330 31 363 1.37e-27 111
MsG0880042809.01.T01 AT1G56670 27.523 327 199 8 12 314 40 352 2.91e-27 110
MsG0880042809.01.T01 AT2G04020 35.714 210 105 8 12 206 43 237 3.46e-27 108
MsG0880042809.01.T01 AT4G01130 28.669 293 167 8 70 327 1 286 5.33e-27 108
MsG0880042809.01.T01 AT2G04020 35.714 210 105 8 12 206 43 237 1.13e-26 107
MsG0880042809.01.T01 AT3G14210 32.381 210 127 6 136 333 22 228 1.13e-25 103
MsG0880042809.01.T01 AT1G54020 30.000 210 133 5 134 334 8 212 3.02e-25 102
MsG0880042809.01.T01 AT1G53970 59.211 76 31 0 6 81 14 89 2.09e-24 95.9
MsG0880042809.01.T01 AT1G53970 59.211 76 31 0 6 81 14 89 2.09e-24 95.9
MsG0880042809.01.T01 AT1G54790 25.648 386 203 12 2 320 21 389 5.81e-23 99.0
MsG0880042809.01.T01 AT2G31550 30.244 205 123 6 114 307 4 199 4.11e-22 93.2
MsG0880042809.01.T01 AT3G62280 28.839 267 175 6 9 271 33 288 7.77e-21 91.3
MsG0880042809.01.T01 AT1G56670 27.273 275 166 8 12 269 40 297 2.52e-19 87.0
MsG0880042809.01.T01 AT1G28580 26.408 284 177 9 63 320 8 285 4.52e-19 86.7
MsG0880042809.01.T01 AT2G36325 29.283 321 183 14 9 308 44 341 9.84e-19 86.3
MsG0880042809.01.T01 AT1G28600 37.241 145 78 6 16 150 35 176 1.43e-17 80.9
MsG0880042809.01.T01 AT5G03590 26.882 279 146 8 41 308 11 242 5.47e-16 77.0
MsG0880042809.01.T01 AT4G16233 31.200 125 76 2 217 333 5 127 8.33e-16 73.6
MsG0880042809.01.T01 AT1G28610 41.573 89 47 2 16 101 35 121 1.75e-13 69.7

Find 67 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTTGGGTTGCTTAATT+TGG 0.083505 8:-14340150 MsG0880042809.01.T01:CDS
GACCTAGGTGGAAGAAAATT+TGG 0.128289 8:-14340164 MsG0880042809.01.T01:CDS
GAATTTATTCAAGGAGAAAT+TGG 0.181342 8:-14340455 MsG0880042809.01.T01:CDS
CATGGTGCACTATTCATATT+TGG 0.201400 8:-14341698 MsG0880042809.01.T01:CDS
ATTTCCATTCCATATCAATT+TGG 0.257049 8:+14339687 None:intergenic
AATATTTCGCCAAATTGATA+TGG 0.273243 8:-14339696 MsG0880042809.01.T01:CDS
TTGCTTAATTTGGGTCCTTT+TGG 0.281909 8:-14340140 MsG0880042809.01.T01:CDS
GGAGATTCACTATTTGATAA+TGG 0.318592 8:-14341677 MsG0880042809.01.T01:CDS
TTAACTCCATAGATATATTC+AGG 0.319254 8:+14340686 None:intergenic
CAATTTGTTGATATTGTCAT+TGG 0.319994 8:-14340313 MsG0880042809.01.T01:CDS
CAATGACTATGGTAGTCTTC+TGG 0.327833 8:-14340374 MsG0880042809.01.T01:CDS
AATAGCTGCTTTAGATTGTA+AGG 0.329509 8:+14339649 None:intergenic
CAATACAAGCATTGGTAATC+AGG 0.334657 8:-14341639 MsG0880042809.01.T01:CDS
AAATTTGGGTTGCTTAATTT+GGG 0.339152 8:-14340149 MsG0880042809.01.T01:CDS
AATAGTGCACCATGTTTCTT+AGG 0.357221 8:+14341707 None:intergenic
ACTAAATAAGTATACAGATT+TGG 0.363697 8:+14340405 None:intergenic
GGGTGACCTGGATGCAAATA+TGG 0.373892 8:+14340707 None:intergenic
CTATCCTAGCATAAGAATAT+TGG 0.377524 8:-14340114 MsG0880042809.01.T01:CDS
GGTAGAAGAACACCAGAGTT+TGG 0.379836 8:+14340349 None:intergenic
ATAAGAATATTGGTTAATAA+TGG 0.401415 8:-14340104 MsG0880042809.01.T01:CDS
ATGAAGTATCCTTCAAACTA+TGG 0.406479 8:-14339936 MsG0880042809.01.T01:intron
ACCTAGGTGGAAGAAAATTT+GGG 0.409923 8:-14340163 MsG0880042809.01.T01:CDS
ACAAATTGTTGATGATCAAC+AGG 0.420612 8:+14340328 None:intergenic
AAAATCGTACCAACAAAATC+TGG 0.421278 8:+14341545 None:intergenic
ACTTTCTTTAAGTACCCTTC+TGG 0.425473 8:-14341593 MsG0880042809.01.T01:CDS
GGTCACCCTGAATATATCTA+TGG 0.427944 8:-14340692 MsG0880042809.01.T01:CDS
AATTTATTCAAGGAGAAATT+GGG 0.433733 8:-14340454 MsG0880042809.01.T01:CDS
AAGCTAGAGAACCAGCTAAA+GGG 0.442204 8:-14340005 MsG0880042809.01.T01:CDS
AATATTTGAACCCCTTTAGC+TGG 0.444991 8:+14339994 None:intergenic
TTAACCAATATTCTTATGCT+AGG 0.460332 8:+14340110 None:intergenic
GCATGTTGTGGAAGTGGCTG+TGG 0.466815 8:-14339802 MsG0880042809.01.T01:CDS
TCTGTATACTTATTTAGTGT+TGG 0.466966 8:-14340400 MsG0880042809.01.T01:CDS
AAAGGTAAAGAATTTATTCA+AGG 0.471906 8:-14340464 MsG0880042809.01.T01:CDS
AAATTGATATGGAATGGAAA+TGG 0.479120 8:-14339685 MsG0880042809.01.T01:CDS
TTCGCCAAATTGATATGGAA+TGG 0.491966 8:-14339691 MsG0880042809.01.T01:CDS
AACTACATCAATACAAGCAT+TGG 0.493799 8:-14341647 MsG0880042809.01.T01:CDS
AGTGTTGGAAGCAATGACTA+TGG 0.497856 8:-14340385 MsG0880042809.01.T01:CDS
TATTGATTAGCTTTCTCTGT+AGG 0.500420 8:+14339715 None:intergenic
CAGGCAAATTATCCTCCCTA+TGG 0.501668 8:-14341620 MsG0880042809.01.T01:CDS
TGCAAATATGGTGGAAGTAG+AGG 0.513679 8:+14340719 None:intergenic
TTATAGGAAATTTATGACCT+AGG 0.517577 8:-14340179 MsG0880042809.01.T01:intron
TTAAAGAAAGTCTGTCCATA+GGG 0.522108 8:+14341605 None:intergenic
GAATGTGTACCATAGTTTGA+AGG 0.527964 8:+14339927 None:intergenic
CTTCCACCATATTTGCATCC+AGG 0.531243 8:-14340713 MsG0880042809.01.T01:CDS
AAAGCTAGAGAACCAGCTAA+AGG 0.532853 8:-14340006 MsG0880042809.01.T01:CDS
TTGGTTAATAATGGAACAGA+AGG 0.533866 8:-14340095 MsG0880042809.01.T01:CDS
AGTCTTCTGGATCCAAACTC+TGG 0.534866 8:-14340361 MsG0880042809.01.T01:CDS
CTTAAAGAAAGTCTGTCCAT+AGG 0.538225 8:+14341604 None:intergenic
GCACTCTCTCAAACATCTCA+AGG 0.540073 8:-14340641 MsG0880042809.01.T01:CDS
TGGTGGAAGTAGAGGCAACT+TGG 0.541652 8:+14340727 None:intergenic
ATGCTAGGATAGCAGCCAAA+AGG 0.547875 8:+14340125 None:intergenic
TAGATATATTCAGGGTGACC+TGG 0.550497 8:+14340695 None:intergenic
GAAGCAAGTGCAGCATGTTG+TGG 0.555081 8:-14339814 MsG0880042809.01.T01:CDS
TAACTCCATAGATATATTCA+GGG 0.561814 8:+14340687 None:intergenic
AGTGCAGCATGTTGTGGAAG+TGG 0.579151 8:-14339808 MsG0880042809.01.T01:CDS
AGCTAGAGAACCAGCTAAAG+GGG 0.587898 8:-14340004 MsG0880042809.01.T01:CDS
CATAGATGAAATTTCAGCAG+TGG 0.592459 8:-14340066 MsG0880042809.01.T01:CDS
CCGTCAGAAAATCTACCAGA+AGG 0.595079 8:+14341578 None:intergenic
TGTTGTGGAAGTGGCTGTGG+AGG 0.606060 8:-14339799 MsG0880042809.01.T01:CDS
ATACTTTGATGACATTTGTG+AGG 0.609808 8:+14340287 None:intergenic
CGTCAGAAAATCTACCAGAA+GGG 0.641192 8:+14341579 None:intergenic
TAGGAAATTTATGACCTAGG+TGG 0.647961 8:-14340176 MsG0880042809.01.T01:CDS
AAGAAAGTCTGTCCATAGGG+AGG 0.658983 8:+14341608 None:intergenic
GTTGTGGAAGTGGCTGTGGA+GGG 0.661412 8:-14339798 MsG0880042809.01.T01:CDS
ATGGAAATGGCAGTGTCACA+TGG 0.664922 8:-14339672 MsG0880042809.01.T01:CDS
AATTGCTTGCCTAAGAAACA+TGG 0.674205 8:-14341716 MsG0880042809.01.T01:CDS
TGACCTGGATGCAAATATGG+TGG 0.680616 8:+14340710 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATGATATGTTTATTTAT+AGG - Chr8:14341169-14341188 MsG0880042809.01.T01:intron 10.0%
!!! ACATATGTTTATTTTTTTTT+AGG - Chr8:14339861-14339880 MsG0880042809.01.T01:intron 10.0%
!!! ATATGTTTATTTTTTTTTAG+GGG - Chr8:14339863-14339882 MsG0880042809.01.T01:intron 10.0%
!!! CATATGTTTATTTTTTTTTA+GGG - Chr8:14339862-14339881 MsG0880042809.01.T01:intron 10.0%
!!! TATGTTTTGAAAAAAAAAAT+TGG + Chr8:14339846-14339865 None:intergenic 10.0%
!!! TTTATGTTTGATAAATTTTT+GGG - Chr8:14341516-14341535 MsG0880042809.01.T01:intron 10.0%
!!! TTTTATGTTTGATAAATTTT+TGG - Chr8:14341515-14341534 MsG0880042809.01.T01:intron 10.0%
!!! AAAAAAGTTAACTTTTTATC+CGG - Chr8:14340255-14340274 MsG0880042809.01.T01:intron 15.0%
!!! AAATATAGTTTTCATTTTAG+AGG + Chr8:14340791-14340810 None:intergenic 15.0%
!!! AAGTTAACTTTTTTTAAAGA+AGG + Chr8:14340249-14340268 None:intergenic 15.0%
!!! ATAAGAATATTGGTTAATAA+TGG - Chr8:14341260-14341279 MsG0880042809.01.T01:intron 15.0%
!! AAAGGTAAAGAATTTATTCA+AGG - Chr8:14340900-14340919 MsG0880042809.01.T01:intron 20.0%
!! AATTTATTCAAGGAGAAATT+GGG - Chr8:14340910-14340929 MsG0880042809.01.T01:intron 20.0%
!! ACTAAATAAGTATACAGATT+TGG + Chr8:14340962-14340981 None:intergenic 20.0%
!! TCAGTTGAGTTATTTAAAAA+AGG - Chr8:14340882-14340901 MsG0880042809.01.T01:intron 20.0%
!!! AAAAAGTTAACTTTTTATCC+GGG - Chr8:14340256-14340275 MsG0880042809.01.T01:intron 20.0%
!!! TTTTGTTTTCTTAGAAATCA+AGG + Chr8:14340577-14340596 None:intergenic 20.0%
! AAATTGATATGGAATGGAAA+TGG - Chr8:14341679-14341698 MsG0880042809.01.T01:CDS 25.0%
! AATATTTCGCCAAATTGATA+TGG - Chr8:14341668-14341687 MsG0880042809.01.T01:CDS 25.0%
! AGAAAAATCATCTTAGACTT+TGG + Chr8:14340088-14340107 None:intergenic 25.0%
! ATTTCCATTCCATATCAATT+TGG + Chr8:14341680-14341699 None:intergenic 25.0%
! GAAAAATCATCTTAGACTTT+GGG + Chr8:14340087-14340106 None:intergenic 25.0%
! GAATTTATTCAAGGAGAAAT+TGG - Chr8:14340909-14340928 MsG0880042809.01.T01:intron 25.0%
! TAACTCCATAGATATATTCA+GGG + Chr8:14340680-14340699 None:intergenic 25.0%
! TCTGTATACTTATTTAGTGT+TGG - Chr8:14340964-14340983 MsG0880042809.01.T01:intron 25.0%
! TTAACCAATATTCTTATGCT+AGG + Chr8:14341257-14341276 None:intergenic 25.0%
! TTAACTCCATAGATATATTC+AGG + Chr8:14340681-14340700 None:intergenic 25.0%
! TTATAGGAAATTTATGACCT+AGG - Chr8:14341185-14341204 MsG0880042809.01.T01:intron 25.0%
! TTGTAACACTCTAATCAAAA+TGG + Chr8:14340376-14340395 None:intergenic 25.0%
! TTGTTAGCACAAAAAAATCA+AGG + Chr8:14341118-14341137 None:intergenic 25.0%
!! TTCGATTGTTGTTAACATAT+AGG - Chr8:14340843-14340862 MsG0880042809.01.T01:intron 25.0%
!!! AAAATTTGGGTTGCTTAATT+TGG - Chr8:14341214-14341233 MsG0880042809.01.T01:intron 25.0%
!!! AAATTTGGGTTGCTTAATTT+GGG - Chr8:14341215-14341234 MsG0880042809.01.T01:intron 25.0%
!!! CAATTTGTTGATATTGTCAT+TGG - Chr8:14341051-14341070 MsG0880042809.01.T01:intron 25.0%
!!! TGTTTGATAAATTTTTGGGA+AGG - Chr8:14341520-14341539 MsG0880042809.01.T01:intron 25.0%
AAAATCGTACCAACAAAATC+TGG + Chr8:14339822-14339841 None:intergenic 30.0%
AACTACATCAATACAAGCAT+TGG - Chr8:14339717-14339736 MsG0880042809.01.T01:CDS 30.0%
AGAACTCCTAAAAAAAGTGA+CGG + Chr8:14340117-14340136 None:intergenic 30.0%
AGACTCCTAACAATTATGTA+GGG + Chr8:14339941-14339960 None:intergenic 30.0%
CTATCCTAGCATAAGAATAT+TGG - Chr8:14341250-14341269 MsG0880042809.01.T01:intron 30.0%
GGAGATTCACTATTTGATAA+TGG - Chr8:14339687-14339706 MsG0880042809.01.T01:CDS 30.0%
GTAATCTCTAGTATATCATG+TGG + Chr8:14340147-14340166 None:intergenic 30.0%
TTAAAGAAAGTCTGTCCATA+GGG + Chr8:14339762-14339781 None:intergenic 30.0%
! AATAACTCAACTGAGTTTTC+AGG + Chr8:14340876-14340895 None:intergenic 30.0%
! AATAGCTGCTTTAGATTGTA+AGG + Chr8:14341718-14341737 None:intergenic 30.0%
! ATACTTTGATGACATTTGTG+AGG + Chr8:14341080-14341099 None:intergenic 30.0%
! ATGAAGTATCCTTCAAACTA+TGG - Chr8:14341428-14341447 MsG0880042809.01.T01:intron 30.0%
! TATGGAGTTAATTTTGCATC+AGG - Chr8:14340690-14340709 MsG0880042809.01.T01:CDS 30.0%
! TTGGTTAATAATGGAACAGA+AGG - Chr8:14341269-14341288 MsG0880042809.01.T01:intron 30.0%
!! ACAAATTGTTGATGATCAAC+AGG + Chr8:14341039-14341058 None:intergenic 30.0%
!! TATTGATTAGCTTTCTCTGT+AGG + Chr8:14341652-14341671 None:intergenic 30.0%
!!! TTCATTCCGTCACTTTTTTT+AGG - Chr8:14340108-14340127 MsG0880042809.01.T01:CDS 30.0%
AATAGTGCACCATGTTTCTT+AGG + Chr8:14339660-14339679 None:intergenic 35.0%
AATATTTGAACCCCTTTAGC+TGG + Chr8:14341373-14341392 None:intergenic 35.0%
AATTGCTTGCCTAAGAAACA+TGG - Chr8:14339648-14339667 MsG0880042809.01.T01:CDS 35.0%
ACATAATTGTTAGGAGTCTG+AGG - Chr8:14339942-14339961 MsG0880042809.01.T01:CDS 35.0%
ACCTAGGTGGAAGAAAATTT+GGG - Chr8:14341201-14341220 MsG0880042809.01.T01:intron 35.0%
ACTTTCTTTAAGTACCCTTC+TGG - Chr8:14339771-14339790 MsG0880042809.01.T01:CDS 35.0%
ATCCTCCCTACATAATTGTT+AGG - Chr8:14339933-14339952 MsG0880042809.01.T01:intron 35.0%
ATCTCTAGTATATCATGTGG+CGG + Chr8:14340144-14340163 None:intergenic 35.0%
CAGACTCCTAACAATTATGT+AGG + Chr8:14339942-14339961 None:intergenic 35.0%
CATAATTGTTAGGAGTCTGA+GGG - Chr8:14339943-14339962 MsG0880042809.01.T01:CDS 35.0%
CATAGATGAAATTTCAGCAG+TGG - Chr8:14341298-14341317 MsG0880042809.01.T01:intron 35.0%
CATGGTGCACTATTCATATT+TGG - Chr8:14339666-14339685 MsG0880042809.01.T01:CDS 35.0%
CTTAAAGAAAGTCTGTCCAT+AGG + Chr8:14339763-14339782 None:intergenic 35.0%
GAATGTGTACCATAGTTTGA+AGG + Chr8:14341440-14341459 None:intergenic 35.0%
GATTGTCAAAAAACCTGAAC+AGG - Chr8:14340522-14340541 MsG0880042809.01.T01:intron 35.0%
TAGGAAATTTATGACCTAGG+TGG - Chr8:14341188-14341207 MsG0880042809.01.T01:intron 35.0%
TTCGCCAAATTGATATGGAA+TGG - Chr8:14341673-14341692 MsG0880042809.01.T01:CDS 35.0%
! ACACAGTAGTACTAGTCTAT+AGG + Chr8:14340554-14340573 None:intergenic 35.0%
! ACTTTTTATCCGGGAAATTG+TGG - Chr8:14340265-14340284 MsG0880042809.01.T01:intron 35.0%
! GAGTTAATTTTGCATCAGGA+GGG - Chr8:14340694-14340713 MsG0880042809.01.T01:CDS 35.0%
! TTAGACTTTGGGAGAATATG+TGG + Chr8:14340076-14340095 None:intergenic 35.0%
!! CAATACAAGCATTGGTAATC+AGG - Chr8:14339725-14339744 MsG0880042809.01.T01:CDS 35.0%
!! TATTGATTCGTTGTTTCTCC+CGG + Chr8:14339973-14339992 None:intergenic 35.0%
!! TTGCTTAATTTGGGTCCTTT+TGG - Chr8:14341224-14341243 MsG0880042809.01.T01:intron 35.0%
AAAGCTAGAGAACCAGCTAA+AGG - Chr8:14341358-14341377 MsG0880042809.01.T01:intron 40.0%
AAGCTAGAGAACCAGCTAAA+GGG - Chr8:14341359-14341378 MsG0880042809.01.T01:intron 40.0%
ACATCACTACCACAATTTCC+CGG + Chr8:14340277-14340296 None:intergenic 40.0%
CAATGACTATGGTAGTCTTC+TGG - Chr8:14340990-14341009 MsG0880042809.01.T01:intron 40.0%
CGTCAGAAAATCTACCAGAA+GGG + Chr8:14339788-14339807 None:intergenic 40.0%
CTATAGGACAAATCCTGTTC+AGG + Chr8:14340538-14340557 None:intergenic 40.0%
CTCCATAACCATAAGAGAGA+GGG - Chr8:14340048-14340067 MsG0880042809.01.T01:CDS 40.0%
CTCCTAACAATTATGTAGGG+AGG + Chr8:14339938-14339957 None:intergenic 40.0%
GACCTAGGTGGAAGAAAATT+TGG - Chr8:14341200-14341219 MsG0880042809.01.T01:intron 40.0%
GGTCACCCTGAATATATCTA+TGG - Chr8:14340672-14340691 MsG0880042809.01.T01:CDS 40.0%
TAGATATATTCAGGGTGACC+TGG + Chr8:14340672-14340691 None:intergenic 40.0%
! ACCCAAATTTTCTTCCACCT+AGG + Chr8:14341205-14341224 None:intergenic 40.0%
! AGTGTTGGAAGCAATGACTA+TGG - Chr8:14340979-14340998 MsG0880042809.01.T01:intron 40.0%
! CCTTCTGGTAGATTTTCTGA+CGG - Chr8:14339786-14339805 MsG0880042809.01.T01:CDS 40.0%
! CGCATGATACCAGATTTTGT+TGG - Chr8:14339810-14339829 MsG0880042809.01.T01:CDS 40.0%
! GGAGTTAATTTTGCATCAGG+AGG - Chr8:14340693-14340712 MsG0880042809.01.T01:CDS 40.0%
! TGCAAATATGGTGGAAGTAG+AGG + Chr8:14340648-14340667 None:intergenic 40.0%
AAGAAAGTCTGTCCATAGGG+AGG + Chr8:14339759-14339778 None:intergenic 45.0%
AGCTAGAGAACCAGCTAAAG+GGG - Chr8:14341360-14341379 MsG0880042809.01.T01:intron 45.0%
AGTCTTCTGGATCCAAACTC+TGG - Chr8:14341003-14341022 MsG0880042809.01.T01:intron 45.0%
ATGCTAGGATAGCAGCCAAA+AGG + Chr8:14341242-14341261 None:intergenic 45.0%
ATGGAAATGGCAGTGTCACA+TGG - Chr8:14341692-14341711 MsG0880042809.01.T01:CDS 45.0%
CACATGATGTTGTCGAGTGA+CGG - Chr8:14340335-14340354 MsG0880042809.01.T01:CDS 45.0%
CAGGCAAATTATCCTCCCTA+TGG - Chr8:14339744-14339763 MsG0880042809.01.T01:CDS 45.0%
CCGTCAGAAAATCTACCAGA+AGG + Chr8:14339789-14339808 None:intergenic 45.0%
CTTCCACCATATTTGCATCC+AGG - Chr8:14340651-14340670 MsG0880042809.01.T01:CDS 45.0%
GCACTCTCTCAAACATCTCA+AGG - Chr8:14340723-14340742 MsG0880042809.01.T01:CDS 45.0%
GCTCCATAACCATAAGAGAG+AGG - Chr8:14340047-14340066 MsG0880042809.01.T01:CDS 45.0%
GGTAGAAGAACACCAGAGTT+TGG + Chr8:14341018-14341037 None:intergenic 45.0%
TGACCTGGATGCAAATATGG+TGG + Chr8:14340657-14340676 None:intergenic 45.0%
! AATTTTGCATCAGGAGGGTC+TGG - Chr8:14340699-14340718 MsG0880042809.01.T01:CDS 45.0%
! GAGTGACGGAACTTAGCAAA+GGG - Chr8:14340349-14340368 MsG0880042809.01.T01:CDS 45.0%
AGTGCAGCATGTTGTGGAAG+TGG - Chr8:14341556-14341575 MsG0880042809.01.T01:CDS 50.0%
CGCCCTCTCTCTTATGGTTA+TGG + Chr8:14340053-14340072 None:intergenic 50.0%
CGTCACTCGACAACATCATG+TGG + Chr8:14340337-14340356 None:intergenic 50.0%
GAAGCAAGTGCAGCATGTTG+TGG - Chr8:14341550-14341569 MsG0880042809.01.T01:intron 50.0%
GGGTGACCTGGATGCAAATA+TGG + Chr8:14340660-14340679 None:intergenic 50.0%
TGGTGGAAGTAGAGGCAACT+TGG + Chr8:14340640-14340659 None:intergenic 50.0%
TTAGGAGTCTGAGGGAGTTC+CGG - Chr8:14339951-14339970 MsG0880042809.01.T01:CDS 50.0%
! CGAGTGACGGAACTTAGCAA+AGG - Chr8:14340348-14340367 MsG0880042809.01.T01:CDS 50.0%
ATGTGGCGCCCTCTCTCTTA+TGG + Chr8:14340059-14340078 None:intergenic 55.0%
GCATGTTGTGGAAGTGGCTG+TGG - Chr8:14341562-14341581 MsG0880042809.01.T01:CDS 55.0%
GTTGTGGAAGTGGCTGTGGA+GGG - Chr8:14341566-14341585 MsG0880042809.01.T01:CDS 55.0%
TAGGAGTCTGAGGGAGTTCC+GGG - Chr8:14339952-14339971 MsG0880042809.01.T01:CDS 55.0%
TGTTGTGGAAGTGGCTGTGG+AGG - Chr8:14341565-14341584 MsG0880042809.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr8 gene 14339639 14341747 14339639 ID=MsG0880042809.01;Name=MsG0880042809.01
Chr8 mRNA 14339639 14341747 14339639 ID=MsG0880042809.01.T01;Parent=MsG0880042809.01;Name=MsG0880042809.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0|0|1|1|1|5|0|336
Chr8 exon 14341555 14341747 14341555 ID=MsG0880042809.01.T01:exon:36883;Parent=MsG0880042809.01.T01
Chr8 exon 14340637 14340758 14340637 ID=MsG0880042809.01.T01:exon:36882;Parent=MsG0880042809.01.T01
Chr8 exon 14340291 14340521 14340291 ID=MsG0880042809.01.T01:exon:36881;Parent=MsG0880042809.01.T01
Chr8 exon 14339937 14340195 14339937 ID=MsG0880042809.01.T01:exon:36880;Parent=MsG0880042809.01.T01
Chr8 exon 14339639 14339844 14339639 ID=MsG0880042809.01.T01:exon:36879;Parent=MsG0880042809.01.T01
Chr8 CDS 14341555 14341747 14341555 ID=MsG0880042809.01.T01:cds;Parent=MsG0880042809.01.T01
Chr8 CDS 14340637 14340758 14340637 ID=MsG0880042809.01.T01:cds;Parent=MsG0880042809.01.T01
Chr8 CDS 14340291 14340521 14340291 ID=MsG0880042809.01.T01:cds;Parent=MsG0880042809.01.T01
Chr8 CDS 14339937 14340195 14339937 ID=MsG0880042809.01.T01:cds;Parent=MsG0880042809.01.T01
Chr8 CDS 14339639 14339844 14339639 ID=MsG0880042809.01.T01:cds;Parent=MsG0880042809.01.T01
Gene Sequence

>MsG0880042809.01.T01

ATGATCATGAATTGCTTGCCTAAGAAACATGGTGCACTATTCATATTTGGAGATTCACTATTTGATAATGGTAACAACAACTACATCAATACAAGCATTGGTAATCAGGCAAATTATCCTCCCTATGGACAGACTTTCTTTAAGTACCCTTCTGGTAGATTTTCTGACGGACGCATGATACCAGATTTTGTTGCTGAGTATGCCAAGTTGCCTCTACTTCCACCATATTTGCATCCAGGTCACCCTGAATATATCTATGGAGTTAATTTTGCATCAGGAGGGTCTGGTGCACTCTCTCAAACATCTCAAGGAAGTGTGATAGACCTGAAAACTCAGTTGAGTTATTTAAAAAAGGTAAAGAATTTATTCAAGGAGAAATTGGGACATGAAAAAACAAAAGAATTGTTGTCCAAATCTGTATACTTATTTAGTGTTGGAAGCAATGACTATGGTAGTCTTCTGGATCCAAACTCTGGTGTTCTTCTACCTGTTGATCATCAACAATTTGTTGATATTGTCATTGGAAACCTCACAAATGTCATCAAAGAAATTTATGACCTAGGTGGAAGAAAATTTGGGTTGCTTAATTTGGGTCCTTTTGGCTGCTATCCTAGCATAAGAATATTGGTTAATAATGGAACAGAAGGTGAATGCATAGATGAAATTTCAGCAGTGGCAAGACTACACAACAATAAACTCACAAAAATGCTTCAAAAGCTAGAGAACCAGCTAAAGGGGTTCAAATATTCAATCAATGATTTCTACAGTGCATTTTCTGAAGTGATGAAGTATCCTTCAAACTATGGCTTTAAAGAAGCAAGTGCAGCATGTTGTGGAAGTGGCTGTGGAGGGAACAAAGAATATGAGTTATGTGACAATGTGAATGAACATGTATTCTTTGACACTCATCATCCTACAGAGAAAGCTAATCAATATTTCGCCAAATTGATATGGAATGGAAATGGCAGTGTCACATGGCCTTACAATCTAAAGCAGCTATTTGAAATTTGA
Protein sequence

>MsG0880042809.01.T01

MIMNCLPKKHGALFIFGDSLFDNGNNNYINTSIGNQANYPPYGQTFFKYPSGRFSDGRMIPDFVAEYAKLPLLPPYLHPGHPEYIYGVNFASGGSGALSQTSQGSVIDLKTQLSYLKKVKNLFKEKLGHEKTKELLSKSVYLFSVGSNDYGSLLDPNSGVLLPVDHQQFVDIVIGNLTNVIKEIYDLGGRKFGLLNLGPFGCYPSIRILVNNGTEGECIDEISAVARLHNNKLTKMLQKLENQLKGFKYSINDFYSAFSEVMKYPSNYGFKEASAACCGSGCGGNKEYELCDNVNEHVFFDTHHPTEKANQYFAKLIWNGNGSVTWPYNLKQLFEI*