AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043115.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043115.01.T01 MTR_8g028630 99.668 301 1 0 1 301 1 301 0.0 615
MsG0880043115.01.T01 MTR_4g070020 41.346 312 158 7 3 303 14 311 7.96e-67 211
MsG0880043115.01.T01 MTR_1g022190 42.857 280 146 8 26 302 43 311 1.62e-62 200
MsG0880043115.01.T01 MTR_1g022190 42.857 280 146 8 26 302 68 336 3.14e-62 200
MsG0880043115.01.T01 MTR_1g022190 42.857 280 146 8 26 302 73 341 5.91e-62 200
MsG0880043115.01.T01 MTR_4g070020 39.623 212 114 5 3 204 14 221 1.07e-38 137
MsG0880043115.01.T01 MTR_1g022190 38.235 204 117 6 26 227 68 264 1.14e-34 127
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043115.01.T01 AT1G01500 58.478 289 108 5 25 303 41 327 3.60e-117 340
MsG0880043115.01.T01 AT1G19400 44.660 309 137 11 8 303 16 303 2.00e-70 220
MsG0880043115.01.T01 AT1G19400 44.660 309 137 11 8 303 16 303 2.00e-70 220
MsG0880043115.01.T01 AT1G19400 44.660 309 137 11 8 303 16 303 2.00e-70 220
MsG0880043115.01.T01 AT1G75180 43.662 284 135 6 31 301 42 313 7.57e-69 217
MsG0880043115.01.T01 AT1G75180 43.662 284 135 6 31 301 42 313 7.57e-69 217
MsG0880043115.01.T01 AT1G19400 43.478 207 102 6 8 204 16 217 3.24e-42 146
MsG0880043115.01.T01 AT1G75180 38.863 211 107 5 31 223 42 248 2.01e-35 129
MsG0880043115.01.T01 AT1G75180 40.642 187 94 4 31 204 42 224 3.18e-35 127

Find 140 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTCCTAGGCATGCTATTT+TGG 0.201087 8:+19263640 MsG0880043115.01.T01:CDS
GGGAAGAAAGAGAAGGAAAT+AGG 0.237349 8:-19262721 None:intergenic
CGGAAGCGGTGGGGCGGAAG+AGG 0.258564 8:-19263282 None:intergenic
AAATGGGTCTGGTTGGGATA+TGG 0.259376 8:+19263457 MsG0880043115.01.T01:CDS
AGAGTGAAATTTGATGAAAT+TGG 0.271284 8:-19262909 None:intergenic
CAACTCCAGTATATCTTATT+CGG 0.282182 8:-19266211 None:intergenic
CTTGGGGTGTGTGTAGGGCT+TGG 0.293869 8:+19266079 MsG0880043115.01.T01:CDS
AAGAGAAGGAAATAGGGTTT+TGG 0.300092 8:-19262714 None:intergenic
GATGGGAAAATAGTGAAATT+TGG 0.310679 8:-19262876 None:intergenic
TATGTTGCTGGATGTTGTTC+TGG 0.312352 8:+19263569 MsG0880043115.01.T01:CDS
GGAACGGTTGGATGTTGATT+TGG 0.315226 8:+19263433 MsG0880043115.01.T01:CDS
TTGGGGTGTGTGTAGGGCTT+GGG 0.319041 8:+19266080 MsG0880043115.01.T01:CDS
GCCATGATCTATGACTCTTT+AGG 0.320834 8:-19263127 None:intergenic
CCATGATCTATGACTCTTTA+GGG 0.320915 8:-19263126 None:intergenic
TTGGATGTTGATTTGGGAAA+TGG 0.325459 8:+19263440 MsG0880043115.01.T01:CDS
AATGATATCTTGCAGATAAC+AGG 0.328847 8:+19265926 MsG0880043115.01.T01:intron
GTTTAGATTGAAAATGTAAA+AGG 0.332921 8:-19262753 None:intergenic
GTTGGTGTTGGAATTGGCCT+TGG 0.343671 8:+19266061 MsG0880043115.01.T01:CDS
GAGTTGAAGTAGGTTATTCT+TGG 0.351468 8:-19262666 None:intergenic
TAGGCCGAAGCTCGGTGTTT+CGG 0.355279 8:+19263529 MsG0880043115.01.T01:CDS
GTTGTTTCTTTGTGGGTCAT+TGG 0.356531 8:+19263412 MsG0880043115.01.T01:CDS
TCGGTTGAAGTTTATGTTGC+TGG 0.364418 8:+19263557 MsG0880043115.01.T01:CDS
ATATTCATTTCCTCATCTTC+AGG 0.369235 8:-19263671 None:intergenic
TTGGTGTTGGAATTGGCCTT+GGG 0.370536 8:+19266062 MsG0880043115.01.T01:CDS
ATTTGGGAAATGGGTCTGGT+TGG 0.371436 8:+19263450 MsG0880043115.01.T01:CDS
TACTCTCAAGAAATGTATCT+TGG 0.371896 8:+19265998 MsG0880043115.01.T01:CDS
GAACGGTTGGATGTTGATTT+GGG 0.375390 8:+19263434 MsG0880043115.01.T01:CDS
GTTGATTTGGGAAATGGGTC+TGG 0.376873 8:+19263446 MsG0880043115.01.T01:CDS
AAACCTTCTCCTAAAATTCC+TGG 0.377791 8:-19266143 None:intergenic
TTTGGTGGAAAATTGTGTTT+TGG 0.380592 8:-19262858 None:intergenic
AGAAACCGAATAAGATATAC+TGG 0.380950 8:+19266206 MsG0880043115.01.T01:three_prime_UTR
TGGAAGTGGTCAACTCAAAA+AGG 0.381622 8:-19262646 None:intergenic
CTGCATTGTTTAGTTTCTGT+AGG 0.384157 8:+19266289 MsG0880043115.01.T01:three_prime_UTR
TCACTCATCTACAAAACTAA+TGG 0.384365 8:-19266260 None:intergenic
TTTGGGAAATGGGTCTGGTT+GGG 0.394439 8:+19263451 MsG0880043115.01.T01:CDS
GTTAGAGTTGGTGTTGGAAT+TGG 0.395151 8:+19266055 MsG0880043115.01.T01:CDS
ATTGGCCTTGGGGTGTGTGT+AGG 0.400226 8:+19266073 MsG0880043115.01.T01:CDS
CATGTGGCGGTTGGGTCAAT+TGG 0.402178 8:+19263485 MsG0880043115.01.T01:CDS
AGACTATTTCGTTGAGTCCT+AGG 0.402521 8:+19263612 MsG0880043115.01.T01:CDS
GTGACATAGTGTTAAACATT+CGG 0.402805 8:-19263204 None:intergenic
AAAGATGGGTTGTTTCTTTG+TGG 0.406336 8:+19263404 MsG0880043115.01.T01:CDS
TAAAATTCCTGGTTGTCGTT+TGG 0.408356 8:-19266132 None:intergenic
GGTGGGGCGGAAGAGGGTGC+AGG 0.410497 8:-19263275 None:intergenic
TTGGCCTTGGGGTGTGTGTA+GGG 0.413313 8:+19266074 MsG0880043115.01.T01:CDS
AAATGTAAAAGGAGACGAAA+TGG 0.413909 8:-19262742 None:intergenic
CGAATAAGATATACTGGAGT+TGG 0.423433 8:+19266212 MsG0880043115.01.T01:three_prime_UTR
GCGGAAGAGGGTGCAGGGAT+TGG 0.423584 8:-19263269 None:intergenic
TTATAGATACTTATTGTTGT+TGG 0.425453 8:-19266383 None:intergenic
AATTCCACACCCGAAATTGC+AGG 0.433188 8:+19263730 MsG0880043115.01.T01:CDS
TGGATGTTGATTTGGGAAAT+GGG 0.434643 8:+19263441 MsG0880043115.01.T01:CDS
GGAAGAAAGAGAAGGAAATA+GGG 0.436690 8:-19262720 None:intergenic
GTTGATGATTATGATCTTGA+TGG 0.438392 8:+19265956 MsG0880043115.01.T01:CDS
AAGATGGGTTGTTTCTTTGT+GGG 0.441633 8:+19263405 MsG0880043115.01.T01:CDS
GGCGGTTGGGTCAATTGGAT+CGG 0.446061 8:+19263490 MsG0880043115.01.T01:CDS
ACAGGAACAAGTTGTTCAAT+AGG 0.446106 8:+19266448 MsG0880043115.01.T01:three_prime_UTR
TGTCACCCAAAACGTGAAAT+CGG 0.449971 8:+19263221 MsG0880043115.01.T01:CDS
TGCATTGTTTAGTTTCTGTA+GGG 0.456954 8:+19266290 MsG0880043115.01.T01:three_prime_UTR
TGACATAGTGTTAAACATTC+GGG 0.462884 8:-19263203 None:intergenic
ATGGATTGTCATGTGGCGGT+TGG 0.465171 8:+19263476 MsG0880043115.01.T01:CDS
CGGTCACGGCGGAGCGGAAG+CGG 0.465550 8:-19263296 None:intergenic
GCTCGGTGTTTCGGCTCCAT+CGG 0.467166 8:+19263538 MsG0880043115.01.T01:CDS
GTAGGGCTTGGGATTGGCGT+TGG 0.467447 8:+19266091 MsG0880043115.01.T01:CDS
TAGATACTTATTGTTGTTGG+AGG 0.468328 8:-19266380 None:intergenic
CACAGGTGGTGCTGAGTTTG+AGG 0.468347 8:+19263373 MsG0880043115.01.T01:CDS
TTTGTATATTTCTGTTCTCA+TGG 0.471844 8:+19266604 MsG0880043115.01.T01:three_prime_UTR
AATGTAAAAGGAGACGAAAT+GGG 0.473524 8:-19262741 None:intergenic
TCACGGCGGAGCGGAAGCGG+TGG 0.478934 8:-19263293 None:intergenic
AAGTAGGTTATTCTTGGAAG+TGG 0.481808 8:-19262660 None:intergenic
GGATAATGTAGTGTGCCAAC+AGG 0.481845 8:+19266430 MsG0880043115.01.T01:three_prime_UTR
ACGGCGGAGCGGAAGCGGTG+GGG 0.485355 8:-19263291 None:intergenic
GCGGTTGGGTCAATTGGATC+GGG 0.489532 8:+19263491 MsG0880043115.01.T01:CDS
TTTGAGGTGTATGAGAAAGA+TGG 0.490464 8:+19263389 MsG0880043115.01.T01:CDS
GTGTGTGTAGGGCTTGGGAT+TGG 0.491416 8:+19266085 MsG0880043115.01.T01:CDS
GGAGCCGAAACACCGAGCTT+CGG 0.493318 8:-19263533 None:intergenic
CACGGCGGAGCGGAAGCGGT+GGG 0.497443 8:-19263292 None:intergenic
TTGAGGTGTATGAGAAAGAT+GGG 0.497726 8:+19263390 MsG0880043115.01.T01:CDS
CCCTAAAGAGTCATAGATCA+TGG 0.503100 8:+19263126 MsG0880043115.01.T01:CDS
TGGATTGTCATGTGGCGGTT+GGG 0.503354 8:+19263477 MsG0880043115.01.T01:CDS
GAAAACGAACAGTAAAATCT+CGG 0.507067 8:-19266555 None:intergenic
TTGTGGGTCATTGGAACGGT+TGG 0.508966 8:+19263421 MsG0880043115.01.T01:CDS
ACTGATAATGTGAGAATCAC+AGG 0.510457 8:+19263356 MsG0880043115.01.T01:CDS
GCGGAGCGGAAGCGGTGGGG+CGG 0.513735 8:-19263288 None:intergenic
AGATGAGGAAATGAATATGA+TGG 0.524212 8:+19263676 MsG0880043115.01.T01:CDS
GATCATGTTAGTGCTATGAA+TGG 0.524460 8:+19263704 MsG0880043115.01.T01:CDS
TTCTTTGTGGGTCATTGGAA+CGG 0.527611 8:+19263417 MsG0880043115.01.T01:CDS
AATTTGCATAAAATATCTAC+AGG 0.529366 8:-19266577 None:intergenic
ATTGAACAACTTGTTCCTGT+TGG 0.531170 8:-19266445 None:intergenic
GGAAATGAATATGATGGAGA+AGG 0.531570 8:+19263682 MsG0880043115.01.T01:CDS
ACTAATGGTTCATGCATTCA+AGG 0.533913 8:-19266245 None:intergenic
AGTACCTGCAATTTCGGGTG+TGG 0.539845 8:-19263734 None:intergenic
TTCAATGCTGGTGTTAGAGT+TGG 0.540333 8:+19266043 MsG0880043115.01.T01:CDS
GGAAGCGGTGGGGCGGAAGA+GGG 0.549741 8:-19263281 None:intergenic
GTGGGGCGGAAGAGGGTGCA+GGG 0.552077 8:-19263274 None:intergenic
GGGAAAATAGTGAAATTTGG+TGG 0.552101 8:-19262873 None:intergenic
CAGCTCACATGGTTCAATGC+TGG 0.558431 8:+19266031 MsG0880043115.01.T01:CDS
AAAAGTGGAGAGGAAAAGAA+GGG 0.562129 8:-19262777 None:intergenic
TGGTGTTGGAATTGGCCTTG+GGG 0.562631 8:+19266063 MsG0880043115.01.T01:CDS
GGATGCTATTCCTGAAGATG+AGG 0.562715 8:+19263661 MsG0880043115.01.T01:CDS
TGCCTAGGAACTCTCCTCCT+AGG 0.567850 8:-19263629 None:intergenic
GCATCCAAAATAGCATGCCT+AGG 0.570283 8:-19263644 None:intergenic
GTCCTAGGAGGAGAGTTCCT+AGG 0.570794 8:+19263627 MsG0880043115.01.T01:CDS
GGTGAGATGGAGAAGAACGA+AGG 0.585874 8:-19262625 None:intergenic
ATAATGCACAGCTTTGAGGA+TGG 0.587067 8:+19266409 MsG0880043115.01.T01:three_prime_UTR
AAAACGAACAGTAAAATCTC+GGG 0.588352 8:-19266554 None:intergenic
GAAATGTATCTTGGCGAGGA+CGG 0.589890 8:+19266007 MsG0880043115.01.T01:CDS
TTATGATCTTGATGGTAAGA+TGG 0.594471 8:+19265964 MsG0880043115.01.T01:CDS
ACGAAATGGGAAGAAAGAGA+AGG 0.595012 8:-19262728 None:intergenic
CACATTATCAGTGCTAACAT+AGG 0.596347 8:-19263345 None:intergenic
GATGGAGAAGAACGAAGGAA+TGG 0.597395 8:-19262620 None:intergenic
ATAGTCTTACTCAAAATCAC+AGG 0.599378 8:-19263596 None:intergenic
CAAGCCCTACACACACCCCA+AGG 0.600273 8:-19266078 None:intergenic
CTTGATGGTAAGATGGCGAA+CGG 0.602787 8:+19265971 MsG0880043115.01.T01:CDS
GCTGGTGTTAGAGTTGGTGT+TGG 0.604927 8:+19266049 MsG0880043115.01.T01:CDS
AAATTGAGAATGACCCAGAA+AGG 0.606361 8:-19262941 None:intergenic
ACTCTTTATCGACACGGTCA+CGG 0.610515 8:-19263310 None:intergenic
GCGAGGACGGACAGCTCACA+TGG 0.612216 8:+19266020 MsG0880043115.01.T01:CDS
ATGGCATGCATGCTTGAGAG+AGG 0.612220 8:+19266498 MsG0880043115.01.T01:three_prime_UTR
GAAATTGGCAATGATCCAGA+TGG 0.612692 8:-19262894 None:intergenic
GTTCATACCAAACGACAACC+AGG 0.619433 8:+19266125 MsG0880043115.01.T01:CDS
GCAACATAAACTTCAACCGA+TGG 0.620064 8:-19263554 None:intergenic
ATGATATCTTGCAGATAACA+GGG 0.625252 8:+19265927 MsG0880043115.01.T01:intron
AAATTGGCAATGATCCAGAT+GGG 0.628338 8:-19262893 None:intergenic
AAGTGGAGAGGAAAAGAAGG+GGG 0.628374 8:-19262775 None:intergenic
TAGTTTCTGTAGGGTTGATG+CGG 0.629895 8:+19266299 MsG0880043115.01.T01:three_prime_UTR
TCAAGAAATGTATCTTGGCG+AGG 0.631882 8:+19266003 MsG0880043115.01.T01:CDS
CTATTTCGTTGAGTCCTAGG+AGG 0.636486 8:+19263615 MsG0880043115.01.T01:CDS
CCCTAGATAGTAGATAACTA+CGG 0.636934 8:+19262574 None:intergenic
CAGCAGACTCTTTATCGACA+CGG 0.638869 8:-19263316 None:intergenic
GGATATGGATTGTCATGTGG+CGG 0.640013 8:+19263472 MsG0880043115.01.T01:CDS
ACGAAGGAATGGACAAGGTG+TGG 0.644603 8:-19262609 None:intergenic
TTGGGATATGGATTGTCATG+TGG 0.651885 8:+19263469 MsG0880043115.01.T01:CDS
AAAGTGGAGAGGAAAAGAAG+GGG 0.652471 8:-19262776 None:intergenic
GAAGAACGAAGGAATGGACA+AGG 0.671965 8:-19262614 None:intergenic
TCGACACGGTCACGGCGGAG+CGG 0.673707 8:-19263302 None:intergenic
GGAACAAGTTGTTCAATAGG+CGG 0.675979 8:+19266451 MsG0880043115.01.T01:three_prime_UTR
TGTCGATAAAGAGTCTGCTG+AGG 0.707994 8:+19263319 MsG0880043115.01.T01:CDS
GGAACACTATCGATTAAACA+AGG 0.709929 8:-19263182 None:intergenic
TAGATAGTAGATAACTACGG+AGG 0.748352 8:+19262577 None:intergenic
CTTTATCGACACGGTCACGG+CGG 0.771016 8:-19263307 None:intergenic
GATAATGTGAGAATCACAGG+TGG 0.820260 8:+19263359 MsG0880043115.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCAATATCTTTTAATTTT+AGG + Chr8:19264756-19264775 MsG0880043115.01.T01:intron 10.0%
!! AAAATGAAATTCACTAAAAA+AGG - Chr8:19266658-19266677 None:intergenic 15.0%
!! ATTTCTCAATTTAAATTAGT+AGG + Chr8:19263803-19263822 MsG0880043115.01.T01:intron 15.0%
!! GCCATTAAAAAAAATAAAAA+TGG + Chr8:19266479-19266498 MsG0880043115.01.T01:three_prime_UTR 15.0%
!! TAGAATTAGATGAAAAAAAT+TGG - Chr8:19262826-19262845 None:intergenic 15.0%
!!! AAAATATTTGCCATTTTTTT+TGG + Chr8:19264954-19264973 MsG0880043115.01.T01:intron 15.0%
!!! AAATGAATAAAATGCTTTTT+AGG - Chr8:19263776-19263795 None:intergenic 15.0%
!!! ATTTTTTTTATCTAGAACAT+TGG - Chr8:19263982-19264001 None:intergenic 15.0%
!!! GCCATTTTTATTTTTTTTAA+TGG - Chr8:19266483-19266502 None:intergenic 15.0%
!! AATTAAAACTCAAAATGCTA+TGG - Chr8:19264706-19264725 None:intergenic 20.0%
!! AATTTGCATAAAATATCTAC+AGG - Chr8:19266580-19266599 None:intergenic 20.0%
!! CAATTTCATAAAAAGCAAAA+GGG + Chr8:19263020-19263039 MsG0880043115.01.T01:five_prime_UTR 20.0%
!! GTTTAGATTGAAAATGTAAA+AGG - Chr8:19262756-19262775 None:intergenic 20.0%
!! TAATCACAATAAGATACAAT+TGG - Chr8:19263890-19263909 None:intergenic 20.0%
!! TTAACATAATTGCATAATGA+AGG - Chr8:19265703-19265722 None:intergenic 20.0%
!! TTATAGATACTTATTGTTGT+TGG - Chr8:19266386-19266405 None:intergenic 20.0%
!! TTGAATTGTAAAAAAGTTTG+TGG + Chr8:19263859-19263878 MsG0880043115.01.T01:intron 20.0%
!! TTGATTACAAATGTCAAATA+AGG - Chr8:19264742-19264761 None:intergenic 20.0%
!!! AAAATCACTTTTGATTGAAA+TGG + Chr8:19263997-19264016 MsG0880043115.01.T01:intron 20.0%
!!! AACATTTTTATACTACAATC+CGG + Chr8:19264523-19264542 MsG0880043115.01.T01:intron 20.0%
!!! AATCCATGATAACTTATTTT+AGG - Chr8:19265027-19265046 None:intergenic 20.0%
!!! ATCCATGATAACTTATTTTA+GGG - Chr8:19265026-19265045 None:intergenic 20.0%
!!! ATTTTGAAGTTATTTCTACA+TGG + Chr8:19263052-19263071 MsG0880043115.01.T01:exon 20.0%
!!! ATTTTTGATTGAGGTATTTT+AGG + Chr8:19265514-19265533 MsG0880043115.01.T01:intron 20.0%
!!! GTTTAAATTTCAAGAGATTT+TGG - Chr8:19265489-19265508 None:intergenic 20.0%
!!! TAGAAAGTTGAGTAATTTTA+CGG - Chr8:19265750-19265769 None:intergenic 20.0%
!!! TTAGGCATATATTTTTCTTA+AGG + Chr8:19264774-19264793 MsG0880043115.01.T01:intron 20.0%
! AGAGTGAAATTTGATGAAAT+TGG - Chr8:19262912-19262931 None:intergenic 25.0%
! AGTCTTTACAAAACATGTAT+TGG + Chr8:19265370-19265389 MsG0880043115.01.T01:intron 25.0%
! ATAAGGAATAACTGAAAGAA+GGG - Chr8:19265252-19265271 None:intergenic 25.0%
! CCAATTTCATAAAAAGCAAA+AGG + Chr8:19263019-19263038 MsG0880043115.01.T01:five_prime_UTR 25.0%
! CTGTAATGTTAAAACTTTCA+GGG - Chr8:19264278-19264297 None:intergenic 25.0%
! GTTTCATAATGAATCCTTTA+TGG + Chr8:19264446-19264465 MsG0880043115.01.T01:intron 25.0%
! TACCCTAAAATAAGTTATCA+TGG + Chr8:19265021-19265040 MsG0880043115.01.T01:intron 25.0%
! TTAAAAATAGGAGTTGAAGT+AGG - Chr8:19262679-19262698 None:intergenic 25.0%
!! AAGTTATCATGGATTAAGTT+TGG + Chr8:19265032-19265051 MsG0880043115.01.T01:intron 25.0%
!! AGTAAAAAAGCGATTTTTGA+TGG - Chr8:19262986-19263005 None:intergenic 25.0%
!! AGTTATCATGGATTAAGTTT+GGG + Chr8:19265033-19265052 MsG0880043115.01.T01:intron 25.0%
!! ATACATGTTTTGTAAAGACT+AGG - Chr8:19265370-19265389 None:intergenic 25.0%
!! GACATTTTAAACTACAACAT+TGG - Chr8:19263932-19263951 None:intergenic 25.0%
!! TACATGTTTTGTAAAGACTA+GGG - Chr8:19265369-19265388 None:intergenic 25.0%
!! TAGATATGTTTGCTAATAGA+GGG + Chr8:19264803-19264822 MsG0880043115.01.T01:intron 25.0%
!! TTAGATATGTTTGCTAATAG+AGG + Chr8:19264802-19264821 MsG0880043115.01.T01:intron 25.0%
!! TTTGTATATTTCTGTTCTCA+TGG + Chr8:19266604-19266623 MsG0880043115.01.T01:three_prime_UTR 25.0%
!!! AAAAAAAGTACCTGCAATTT+CGG - Chr8:19263743-19263762 None:intergenic 25.0%
!!! AAAATCGCTTTTTTACTATC+TGG + Chr8:19262989-19263008 MsG0880043115.01.T01:five_prime_UTR 25.0%
!!! AAACATCAGATTTTTGATTG+AGG + Chr8:19265505-19265524 MsG0880043115.01.T01:intron 25.0%
!!! AAATCGCTTTTTTACTATCT+GGG + Chr8:19262990-19263009 MsG0880043115.01.T01:five_prime_UTR 25.0%
!!! ACTCTTTTTTTTTTCCTTTC+TGG + Chr8:19262927-19262946 MsG0880043115.01.T01:five_prime_UTR 25.0%
!!! AGTTTTAATTAACACTTTCG+AGG + Chr8:19264716-19264735 MsG0880043115.01.T01:intron 25.0%
!!! CCTTTTGCTTTTTATGAAAT+TGG - Chr8:19263022-19263041 None:intergenic 25.0%
!!! CTCTTTTTTTTTTCCTTTCT+GGG + Chr8:19262928-19262947 MsG0880043115.01.T01:five_prime_UTR 25.0%
!!! TACAAAGTTTTGTCAAATAG+TGG + Chr8:19264094-19264113 MsG0880043115.01.T01:intron 25.0%
AAAAACATCATAACAGTGCT+TGG + Chr8:19265550-19265569 MsG0880043115.01.T01:intron 30.0%
AAAAATAATGCACAGCTTTG+AGG + Chr8:19266405-19266424 MsG0880043115.01.T01:three_prime_UTR 30.0%
AAAACATCATAACAGTGCTT+GGG + Chr8:19265551-19265570 MsG0880043115.01.T01:intron 30.0%
AAAACGAACAGTAAAATCTC+GGG - Chr8:19266557-19266576 None:intergenic 30.0%
AAACTCAAAATGCTATGGAA+AGG - Chr8:19264701-19264720 None:intergenic 30.0%
AAATGTAAAAGGAGACGAAA+TGG - Chr8:19262745-19262764 None:intergenic 30.0%
AATGATATCTTGCAGATAAC+AGG + Chr8:19265926-19265945 MsG0880043115.01.T01:intron 30.0%
AATGTAAAAGGAGACGAAAT+GGG - Chr8:19262744-19262763 None:intergenic 30.0%
AGAAACCGAATAAGATATAC+TGG + Chr8:19266206-19266225 MsG0880043115.01.T01:three_prime_UTR 30.0%
AGATGAGGAAATGAATATGA+TGG + Chr8:19263676-19263695 MsG0880043115.01.T01:CDS 30.0%
ATAAAACTATCGCTCCATAA+AGG - Chr8:19264463-19264482 None:intergenic 30.0%
ATAGCTATTTGATCAACTTC+AGG - Chr8:19264151-19264170 None:intergenic 30.0%
ATATTCATTTCCTCATCTTC+AGG - Chr8:19263674-19263693 None:intergenic 30.0%
ATGATATCTTGCAGATAACA+GGG + Chr8:19265927-19265946 MsG0880043115.01.T01:intron 30.0%
CAACTCCAGTATATCTTATT+CGG - Chr8:19266214-19266233 None:intergenic 30.0%
CATAAGGAATAACTGAAAGA+AGG - Chr8:19265253-19265272 None:intergenic 30.0%
CCAAATGATTGACAATTTAC+AGG - Chr8:19264663-19264682 None:intergenic 30.0%
CCTGTAAATTGTCAATCATT+TGG + Chr8:19264660-19264679 MsG0880043115.01.T01:intron 30.0%
CTAACACACTTCTAACTATT+TGG + Chr8:19264324-19264343 MsG0880043115.01.T01:intron 30.0%
CTAATAAGCTGTTTAGATCA+GGG + Chr8:19264384-19264403 MsG0880043115.01.T01:intron 30.0%
GAAAACGAACAGTAAAATCT+CGG - Chr8:19266558-19266577 None:intergenic 30.0%
GAGGGGTGAAAATTAAAAAT+AGG - Chr8:19262691-19262710 None:intergenic 30.0%
GATGGGAAAATAGTGAAATT+TGG - Chr8:19262879-19262898 None:intergenic 30.0%
GATTGAAATGGTGACTATAA+TGG + Chr8:19264009-19264028 MsG0880043115.01.T01:intron 30.0%
GCTGTAATGTTAAAACTTTC+AGG - Chr8:19264279-19264298 None:intergenic 30.0%
GTGACATAGTGTTAAACATT+CGG - Chr8:19263207-19263226 None:intergenic 30.0%
TAAGGAATAACTGAAAGAAG+GGG - Chr8:19265251-19265270 None:intergenic 30.0%
TACTCTCAAGAAATGTATCT+TGG + Chr8:19265998-19266017 MsG0880043115.01.T01:CDS 30.0%
TCACTCATCTACAAAACTAA+TGG - Chr8:19266263-19266282 None:intergenic 30.0%
TCTAATAAGCTGTTTAGATC+AGG + Chr8:19264383-19264402 MsG0880043115.01.T01:intron 30.0%
TGACATAGTGTTAAACATTC+GGG - Chr8:19263206-19263225 None:intergenic 30.0%
TTCACAGTCTGTCAATATAT+CGG + Chr8:19265801-19265820 MsG0880043115.01.T01:intron 30.0%
TTGTCTAATTTGACCACTTT+CGG - Chr8:19264991-19265010 None:intergenic 30.0%
! AAATAGCTATTTCGTGCTAT+AGG + Chr8:19264161-19264180 MsG0880043115.01.T01:intron 30.0%
! AATTTCACTATTTTCCCATC+TGG + Chr8:19262879-19262898 MsG0880043115.01.T01:five_prime_UTR 30.0%
! ATAGTCTTACTCAAAATCAC+AGG - Chr8:19263599-19263618 None:intergenic 30.0%
! CTATCTTATTTCAGTCTTAG+TGG + Chr8:19265844-19265863 MsG0880043115.01.T01:intron 30.0%
! GAGCTTTTGACCAAAAAAAA+TGG - Chr8:19264967-19264986 None:intergenic 30.0%
! GGTTTTTCTCTTGTAATCAA+CGG + Chr8:19263242-19263261 MsG0880043115.01.T01:CDS 30.0%
! TAGATACTTATTGTTGTTGG+AGG - Chr8:19266383-19266402 None:intergenic 30.0%
! TCCTTATGCTTTTAATCGAA+AGG + Chr8:19265265-19265284 MsG0880043115.01.T01:intron 30.0%
! TGCATTGTTTAGTTTCTGTA+GGG + Chr8:19266290-19266309 MsG0880043115.01.T01:three_prime_UTR 30.0%
! TGCCTTTGTTTGTAATCAAA+GGG - Chr8:19264878-19264897 None:intergenic 30.0%
! TTATGATCTTGATGGTAAGA+TGG + Chr8:19265964-19265983 MsG0880043115.01.T01:CDS 30.0%
! TTGCCTTTGTTTGTAATCAA+AGG - Chr8:19264879-19264898 None:intergenic 30.0%
! TTTGGTGGAAAATTGTGTTT+TGG - Chr8:19262861-19262880 None:intergenic 30.0%
!! AAAAAAGTACCTGCAATTTC+GGG - Chr8:19263742-19263761 None:intergenic 30.0%
!! AAAAACCGATTTCACGTTTT+GGG - Chr8:19263229-19263248 None:intergenic 30.0%
!! GTTGATGATTATGATCTTGA+TGG + Chr8:19265956-19265975 MsG0880043115.01.T01:CDS 30.0%
!! TTTATGGAGCGATAGTTTTA+TGG + Chr8:19264462-19264481 MsG0880043115.01.T01:intron 30.0%
!!! AATGTCGCTTTTGATTGAAA+TGG + Chr8:19263946-19263965 MsG0880043115.01.T01:intron 30.0%
!!! ATAATGGTGTTTTAGCATTG+CGG + Chr8:19264025-19264044 MsG0880043115.01.T01:intron 30.0%
!!! CTCAACTTTCTACTTTTTGT+TGG + Chr8:19265758-19265777 MsG0880043115.01.T01:intron 30.0%
!!! TAGTTTTGTAGATGAGTGAA+AGG + Chr8:19266264-19266283 MsG0880043115.01.T01:three_prime_UTR 30.0%
AAAAAGTGGAGAGGAAAAGA+AGG - Chr8:19262781-19262800 None:intergenic 35.0%
AAAAGTGGAGAGGAAAAGAA+GGG - Chr8:19262780-19262799 None:intergenic 35.0%
AAACAAAGGCAACACTTCAA+GGG + Chr8:19264887-19264906 MsG0880043115.01.T01:intron 35.0%
AAACCTTCTCCTAAAATTCC+TGG - Chr8:19266146-19266165 None:intergenic 35.0%
AAATTGAGAATGACCCAGAA+AGG - Chr8:19262944-19262963 None:intergenic 35.0%
AAATTGGCAATGATCCAGAT+GGG - Chr8:19262896-19262915 None:intergenic 35.0%
AAGTAGGTTATTCTTGGAAG+TGG - Chr8:19262663-19262682 None:intergenic 35.0%
ACAGGAACAAGTTGTTCAAT+AGG + Chr8:19266448-19266467 MsG0880043115.01.T01:three_prime_UTR 35.0%
ACTAATGGTTCATGCATTCA+AGG - Chr8:19266248-19266267 None:intergenic 35.0%
AGAGAGTCTCGCAATAAAAA+AGG + Chr8:19264631-19264650 MsG0880043115.01.T01:intron 35.0%
ATCGGAGATTCATTCTTACT+AGG - Chr8:19264565-19264584 None:intergenic 35.0%
CACATTATCAGTGCTAACAT+AGG - Chr8:19263348-19263367 None:intergenic 35.0%
CAGCAATCACAAAAGAGAAT+AGG - Chr8:19265193-19265212 None:intergenic 35.0%
CCATATTCTTATCGAAGATG+GGG + Chr8:19264845-19264864 MsG0880043115.01.T01:intron 35.0%
CCATGATCTATGACTCTTTA+GGG - Chr8:19263129-19263148 None:intergenic 35.0%
CGAATAAGATATACTGGAGT+TGG + Chr8:19266212-19266231 MsG0880043115.01.T01:three_prime_UTR 35.0%
GAATTTCCAATCTCATCAGA+AGG - Chr8:19265467-19265486 None:intergenic 35.0%
GACTCAATATTGGTATAGTG+AGG - Chr8:19265638-19265657 None:intergenic 35.0%
GAGTTGAAGTAGGTTATTCT+TGG - Chr8:19262669-19262688 None:intergenic 35.0%
GAGTTTATCACTATCAGCAT+TGG - Chr8:19265127-19265146 None:intergenic 35.0%
GATCATGTTAGTGCTATGAA+TGG + Chr8:19263704-19263723 MsG0880043115.01.T01:CDS 35.0%
GCCATATTCTTATCGAAGAT+GGG + Chr8:19264844-19264863 MsG0880043115.01.T01:intron 35.0%
GGAAGAAAGAGAAGGAAATA+GGG - Chr8:19262723-19262742 None:intergenic 35.0%
GGGAAAATAGTGAAATTTGG+TGG - Chr8:19262876-19262895 None:intergenic 35.0%
GGTGCTCTTAGTAGATAATT+AGG + Chr8:19265082-19265101 MsG0880043115.01.T01:intron 35.0%
GTAAGAATGAATCTCCGATT+TGG + Chr8:19264566-19264585 MsG0880043115.01.T01:intron 35.0%
GTCAATATATCGGTAGTTAC+TGG + Chr8:19265811-19265830 MsG0880043115.01.T01:intron 35.0%
TAAAATTCCTGGTTGTCGTT+TGG - Chr8:19266135-19266154 None:intergenic 35.0%
TACAACTGCAGAAACCAAAT+CGG - Chr8:19264583-19264602 None:intergenic 35.0%
TCCCCTTTGATTACAAACAA+AGG + Chr8:19264873-19264892 MsG0880043115.01.T01:intron 35.0%
TGCCATATTCTTATCGAAGA+TGG + Chr8:19264843-19264862 MsG0880043115.01.T01:intron 35.0%
TTCGATAAGAATATGGCAGT+TGG - Chr8:19264841-19264860 None:intergenic 35.0%
TTGAGGTGTATGAGAAAGAT+GGG + Chr8:19263390-19263409 MsG0880043115.01.T01:CDS 35.0%
! AAACGACAACCAGGAATTTT+AGG + Chr8:19266134-19266153 MsG0880043115.01.T01:CDS 35.0%
! AAGAGAAGGAAATAGGGTTT+TGG - Chr8:19262717-19262736 None:intergenic 35.0%
! ACTGATAATGTGAGAATCAC+AGG + Chr8:19263356-19263375 MsG0880043115.01.T01:CDS 35.0%
! AGAGAAGGAAATAGGGTTTT+GGG - Chr8:19262716-19262735 None:intergenic 35.0%
! ATTGAACAACTTGTTCCTGT+TGG - Chr8:19266448-19266467 None:intergenic 35.0%
! CTGCATTGTTTAGTTTCTGT+AGG + Chr8:19266289-19266308 MsG0880043115.01.T01:three_prime_UTR 35.0%
! GCCTTTCGATTAAAAGCATA+AGG - Chr8:19265269-19265288 None:intergenic 35.0%
! GCCTTTGTTTGTAATCAAAG+GGG - Chr8:19264877-19264896 None:intergenic 35.0%
! GGAAATGAATATGATGGAGA+AGG + Chr8:19263682-19263701 MsG0880043115.01.T01:CDS 35.0%
! GGAACACTATCGATTAAACA+AGG - Chr8:19263185-19263204 None:intergenic 35.0%
! TGAGTAATTTTACGGAGAAG+CGG - Chr8:19265742-19265761 None:intergenic 35.0%
! TGCGAGACTCTCTTATTTAA+AGG - Chr8:19264624-19264643 None:intergenic 35.0%
! TTTGAGGTGTATGAGAAAGA+TGG + Chr8:19263389-19263408 MsG0880043115.01.T01:CDS 35.0%
!! AAAGATGGGTTGTTTCTTTG+TGG + Chr8:19263404-19263423 MsG0880043115.01.T01:CDS 35.0%
!! AAGATGGGTTGTTTCTTTGT+GGG + Chr8:19263405-19263424 MsG0880043115.01.T01:CDS 35.0%
!! GAAAAACCGATTTCACGTTT+TGG - Chr8:19263230-19263249 None:intergenic 35.0%
!! TGGATGTTGATTTGGGAAAT+GGG + Chr8:19263441-19263460 MsG0880043115.01.T01:CDS 35.0%
!! TTGGATGTTGATTTGGGAAA+TGG + Chr8:19263440-19263459 MsG0880043115.01.T01:CDS 35.0%
!!! AGCTGGAAAGCTTTCTTTTT+TGG + Chr8:19264927-19264946 MsG0880043115.01.T01:intron 35.0%
!!! GATTTTGTTTTCCCTGAGAA+GGG - Chr8:19262804-19262823 None:intergenic 35.0%
AAAGTGGAGAGGAAAAGAAG+GGG - Chr8:19262779-19262798 None:intergenic 40.0%
ACGAAATGGGAAGAAAGAGA+AGG - Chr8:19262731-19262750 None:intergenic 40.0%
AGACTATTTCGTTGAGTCCT+AGG + Chr8:19263612-19263631 MsG0880043115.01.T01:CDS 40.0%
CAAACAAAGGCAACACTTCA+AGG + Chr8:19264886-19264905 MsG0880043115.01.T01:intron 40.0%
CCCCATCTTCGATAAGAATA+TGG - Chr8:19264848-19264867 None:intergenic 40.0%
CCCTAAAGAGTCATAGATCA+TGG + Chr8:19263126-19263145 MsG0880043115.01.T01:CDS 40.0%
CTATTGACAACACTGACAGA+AGG - Chr8:19265303-19265322 None:intergenic 40.0%
GAAATTGGCAATGATCCAGA+TGG - Chr8:19262897-19262916 None:intergenic 40.0%
GATAATGTGAGAATCACAGG+TGG + Chr8:19263359-19263378 MsG0880043115.01.T01:CDS 40.0%
GCAACATAAACTTCAACCGA+TGG - Chr8:19263557-19263576 None:intergenic 40.0%
GCCATGATCTATGACTCTTT+AGG - Chr8:19263130-19263149 None:intergenic 40.0%
GCGTTATTACACCTATAGCA+CGG + Chr8:19264116-19264135 MsG0880043115.01.T01:intron 40.0%
GGAACAAGTTGTTCAATAGG+CGG + Chr8:19266451-19266470 MsG0880043115.01.T01:three_prime_UTR 40.0%
GGGAAGAAAGAGAAGGAAAT+AGG - Chr8:19262724-19262743 None:intergenic 40.0%
GTCAACTCAAAAAGGTGAGA+TGG - Chr8:19262641-19262660 None:intergenic 40.0%
TATGTTGCTGGATGTTGTTC+TGG + Chr8:19263569-19263588 MsG0880043115.01.T01:CDS 40.0%
TCAAGAAATGTATCTTGGCG+AGG + Chr8:19266003-19266022 MsG0880043115.01.T01:CDS 40.0%
TCCCAAATAACAGCTGTTTG+TGG + Chr8:19265425-19265444 MsG0880043115.01.T01:intron 40.0%
TCGGTTGAAGTTTATGTTGC+TGG + Chr8:19263557-19263576 MsG0880043115.01.T01:CDS 40.0%
TGAGGTAGCAAATGCAAAAC+TGG - Chr8:19265620-19265639 None:intergenic 40.0%
TGGAAGTGGTCAACTCAAAA+AGG - Chr8:19262649-19262668 None:intergenic 40.0%
TGTCACCCAAAACGTGAAAT+CGG + Chr8:19263221-19263240 MsG0880043115.01.T01:CDS 40.0%
TTCTTTGTGGGTCATTGGAA+CGG + Chr8:19263417-19263436 MsG0880043115.01.T01:CDS 40.0%
TTGTCAATAGTGCGCTATAC+CGG + Chr8:19265313-19265332 MsG0880043115.01.T01:intron 40.0%
TTTGATCAACTTCAGGTACG+CGG - Chr8:19264144-19264163 None:intergenic 40.0%
! GATTTGGTTTCTGCAGTTGT+AGG + Chr8:19264582-19264601 MsG0880043115.01.T01:intron 40.0%
! GCCACAAACAGCTGTTATTT+GGG - Chr8:19265429-19265448 None:intergenic 40.0%
! TCAAGGGTCAAAAGCTGTTT+TGG + Chr8:19264903-19264922 MsG0880043115.01.T01:intron 40.0%
! TGCTTTTAATCGAAAGGCTG+AGG + Chr8:19265271-19265290 MsG0880043115.01.T01:intron 40.0%
! TTCAATGCTGGTGTTAGAGT+TGG + Chr8:19266043-19266062 MsG0880043115.01.T01:CDS 40.0%
! TTGGGATATGGATTGTCATG+TGG + Chr8:19263469-19263488 MsG0880043115.01.T01:CDS 40.0%
!! AAGAGCACCACATAAACCAA+GGG - Chr8:19265071-19265090 None:intergenic 40.0%
!! AGGTAGTGAAAGTACTAGAC+CGG - Chr8:19264545-19264564 None:intergenic 40.0%
!! AGTTCCTAGGCATGCTATTT+TGG + Chr8:19263640-19263659 MsG0880043115.01.T01:CDS 40.0%
!! ATAATGCACAGCTTTGAGGA+TGG + Chr8:19266409-19266428 MsG0880043115.01.T01:three_prime_UTR 40.0%
!! CAACCAGGAATTTTAGGAGA+AGG + Chr8:19266140-19266159 MsG0880043115.01.T01:CDS 40.0%
!! GAACGGTTGGATGTTGATTT+GGG + Chr8:19263434-19263453 MsG0880043115.01.T01:CDS 40.0%
!! GTTAGAGTTGGTGTTGGAAT+TGG + Chr8:19266055-19266074 MsG0880043115.01.T01:CDS 40.0%
!! GTTGTTTCTTTGTGGGTCAT+TGG + Chr8:19263412-19263431 MsG0880043115.01.T01:CDS 40.0%
!! TAAGAGCACCACATAAACCA+AGG - Chr8:19265072-19265091 None:intergenic 40.0%
!! TAGTTTCTGTAGGGTTGATG+CGG + Chr8:19266299-19266318 MsG0880043115.01.T01:three_prime_UTR 40.0%
!!! AAATAGGGTTTTGGGATGAG+GGG - Chr8:19262708-19262727 None:intergenic 40.0%
!!! CGGGTTCTTCAGCTTTTTTT+AGG + Chr8:19263510-19263529 MsG0880043115.01.T01:CDS 40.0%
!!! GAAATAGGGTTTTGGGATGA+GGG - Chr8:19262709-19262728 None:intergenic 40.0%
!!! GGATTTTGTTTTCCCTGAGA+AGG - Chr8:19262805-19262824 None:intergenic 40.0%
!!! GTCGCTTTTGATTGAAATGG+TGG + Chr8:19263949-19263968 MsG0880043115.01.T01:intron 40.0%
!!! TCAAAAGCTGTTTTGGAAGC+TGG + Chr8:19264910-19264929 MsG0880043115.01.T01:intron 40.0%
AAATGGGTCTGGTTGGGATA+TGG + Chr8:19263457-19263476 MsG0880043115.01.T01:CDS 45.0%
AAGTGGAGAGGAAAAGAAGG+GGG - Chr8:19262778-19262797 None:intergenic 45.0%
AATTCCACACCCGAAATTGC+AGG + Chr8:19263730-19263749 MsG0880043115.01.T01:CDS 45.0%
ACTCTTTATCGACACGGTCA+CGG - Chr8:19263313-19263332 None:intergenic 45.0%
ATTTGGGAAATGGGTCTGGT+TGG + Chr8:19263450-19263469 MsG0880043115.01.T01:CDS 45.0%
CAGCAGACTCTTTATCGACA+CGG - Chr8:19263319-19263338 None:intergenic 45.0%
CTATTTCGTTGAGTCCTAGG+AGG + Chr8:19263615-19263634 MsG0880043115.01.T01:CDS 45.0%
GAAATGTATCTTGGCGAGGA+CGG + Chr8:19266007-19266026 MsG0880043115.01.T01:CDS 45.0%
GAAGAACGAAGGAATGGACA+AGG - Chr8:19262617-19262636 None:intergenic 45.0%
GATGGAGAAGAACGAAGGAA+TGG - Chr8:19262623-19262642 None:intergenic 45.0%
GCATCCAAAATAGCATGCCT+AGG - Chr8:19263647-19263666 None:intergenic 45.0%
GGATAATGTAGTGTGCCAAC+AGG + Chr8:19266430-19266449 MsG0880043115.01.T01:three_prime_UTR 45.0%
GGATGCTATTCCTGAAGATG+AGG + Chr8:19263661-19263680 MsG0880043115.01.T01:CDS 45.0%
GGCCACAAACAGCTGTTATT+TGG - Chr8:19265430-19265449 None:intergenic 45.0%
GTTCATACCAAACGACAACC+AGG + Chr8:19266125-19266144 MsG0880043115.01.T01:CDS 45.0%
TCTGAGCTATGCATGACACA+TGG + Chr8:19264202-19264221 MsG0880043115.01.T01:intron 45.0%
TGACACATGGAGAACTAGGA+TGG + Chr8:19264215-19264234 MsG0880043115.01.T01:intron 45.0%
TGAGAAGGGAAAAAGTGGAG+AGG - Chr8:19262790-19262809 None:intergenic 45.0%
TGAGTGAGACAGAGTGAGAT+AGG - Chr8:19265577-19265596 None:intergenic 45.0%
TGCATGACACATGGAGAACT+AGG + Chr8:19264211-19264230 MsG0880043115.01.T01:intron 45.0%
TGTCGATAAAGAGTCTGCTG+AGG + Chr8:19263319-19263338 MsG0880043115.01.T01:CDS 45.0%
TTCCCTGAGAAGGGAAAAAG+TGG - Chr8:19262795-19262814 None:intergenic 45.0%
TTTGGGAAATGGGTCTGGTT+GGG + Chr8:19263451-19263470 MsG0880043115.01.T01:CDS 45.0%
! AGAGCACCACATAAACCAAG+GGG - Chr8:19265070-19265089 None:intergenic 45.0%
! CAGAGCGACTGACTCAATAT+TGG - Chr8:19265648-19265667 None:intergenic 45.0%
! CTGAGTGTTGTATGCTGAAC+TGG + Chr8:19265165-19265184 MsG0880043115.01.T01:intron 45.0%
! CTTGATGGTAAGATGGCGAA+CGG + Chr8:19265971-19265990 MsG0880043115.01.T01:CDS 45.0%
! GGAACGGTTGGATGTTGATT+TGG + Chr8:19263433-19263452 MsG0880043115.01.T01:CDS 45.0%
! GGATATGGATTGTCATGTGG+CGG + Chr8:19263472-19263491 MsG0880043115.01.T01:CDS 45.0%
! TCTGCTCTGCTATTTGGGAT+CGG + Chr8:19265669-19265688 MsG0880043115.01.T01:intron 45.0%
! TCTGCTCTGCTCTGCTATTT+GGG + Chr8:19265664-19265683 MsG0880043115.01.T01:intron 45.0%
!! GTTGATTTGGGAAATGGGTC+TGG + Chr8:19263446-19263465 MsG0880043115.01.T01:CDS 45.0%
!! TTGGTGTTGGAATTGGCCTT+GGG + Chr8:19266062-19266081 MsG0880043115.01.T01:CDS 45.0%
!!! CTCCACTTTTTCCCTTCTCA+GGG + Chr8:19262790-19262809 MsG0880043115.01.T01:five_prime_UTR 45.0%
!!! GCTTTTTTTAGGCCGAAGCT+CGG + Chr8:19263521-19263540 MsG0880043115.01.T01:CDS 45.0%
!!! GGAAATAGGGTTTTGGGATG+AGG - Chr8:19262710-19262729 None:intergenic 45.0%
!!! TCTCCACTTTTTCCCTTCTC+AGG + Chr8:19262789-19262808 MsG0880043115.01.T01:five_prime_UTR 45.0%
ACACTACACCACTACAGCAC+CGG - Chr8:19265335-19265354 None:intergenic 50.0%
ACGAAGGAATGGACAAGGTG+TGG - Chr8:19262612-19262631 None:intergenic 50.0%
ATGGCATGCATGCTTGAGAG+AGG + Chr8:19266498-19266517 MsG0880043115.01.T01:three_prime_UTR 50.0%
CAGCTCACATGGTTCAATGC+TGG + Chr8:19266031-19266050 MsG0880043115.01.T01:CDS 50.0%
CTCTGCTCTGCTCTGCTATT+TGG + Chr8:19265663-19265682 MsG0880043115.01.T01:intron 50.0%
GAGCACCACATAAACCAAGG+GGG - Chr8:19265069-19265088 None:intergenic 50.0%
GGTCAAAAGCTCTCCGAAAG+TGG + Chr8:19264975-19264994 MsG0880043115.01.T01:intron 50.0%
GGTGAGATGGAGAAGAACGA+AGG - Chr8:19262628-19262647 None:intergenic 50.0%
GTGGTGTAGTGTAACAGAGC+AGG + Chr8:19265343-19265362 MsG0880043115.01.T01:intron 50.0%
TCCAATCTCATCAGAAGGCG+TGG - Chr8:19265462-19265481 None:intergenic 50.0%
TGCATCCCCCTTGGTTTATG+TGG + Chr8:19265061-19265080 MsG0880043115.01.T01:intron 50.0%
TGGATTGTCATGTGGCGGTT+GGG + Chr8:19263477-19263496 MsG0880043115.01.T01:CDS 50.0%
TTGTGGGTCATTGGAACGGT+TGG + Chr8:19263421-19263440 MsG0880043115.01.T01:CDS 50.0%
! AGTACCTGCAATTTCGGGTG+TGG - Chr8:19263737-19263756 None:intergenic 50.0%
! ATGGATTGTCATGTGGCGGT+TGG + Chr8:19263476-19263495 MsG0880043115.01.T01:CDS 50.0%
!! GCTGGTGTTAGAGTTGGTGT+TGG + Chr8:19266049-19266068 MsG0880043115.01.T01:CDS 50.0%
!! GTTGGTGTTGGAATTGGCCT+TGG + Chr8:19266061-19266080 MsG0880043115.01.T01:CDS 50.0%
!! TGGTGTTGGAATTGGCCTTG+GGG + Chr8:19266063-19266082 MsG0880043115.01.T01:CDS 50.0%
CATGTGGCGGTTGGGTCAAT+TGG + Chr8:19263485-19263504 MsG0880043115.01.T01:CDS 55.0%
CTTTATCGACACGGTCACGG+CGG - Chr8:19263310-19263329 None:intergenic 55.0%
GCCACGCCTTCTGATGAGAT+TGG + Chr8:19265458-19265477 MsG0880043115.01.T01:intron 55.0%
GCGGTTGGGTCAATTGGATC+GGG + Chr8:19263491-19263510 MsG0880043115.01.T01:CDS 55.0%
GGCGGTTGGGTCAATTGGAT+CGG + Chr8:19263490-19263509 MsG0880043115.01.T01:CDS 55.0%
GTCCTAGGAGGAGAGTTCCT+AGG + Chr8:19263627-19263646 MsG0880043115.01.T01:CDS 55.0%
GTGTGTGTAGGGCTTGGGAT+TGG + Chr8:19266085-19266104 MsG0880043115.01.T01:CDS 55.0%
TGCCTAGGAACTCTCCTCCT+AGG - Chr8:19263632-19263651 None:intergenic 55.0%
TTGGGGTGTGTGTAGGGCTT+GGG + Chr8:19266080-19266099 MsG0880043115.01.T01:CDS 55.0%
! CACAGGTGGTGCTGAGTTTG+AGG + Chr8:19263373-19263392 MsG0880043115.01.T01:CDS 55.0%
! CAGAAGGCGTGGCACTATAG+CGG - Chr8:19265451-19265470 None:intergenic 55.0%
!! ATTGGCCTTGGGGTGTGTGT+AGG + Chr8:19266073-19266092 MsG0880043115.01.T01:CDS 55.0%
!! TAGGCCGAAGCTCGGTGTTT+CGG + Chr8:19263529-19263548 MsG0880043115.01.T01:CDS 55.0%
!! TTGGCCTTGGGGTGTGTGTA+GGG + Chr8:19266074-19266093 MsG0880043115.01.T01:CDS 55.0%
CAAGCCCTACACACACCCCA+AGG - Chr8:19266081-19266100 None:intergenic 60.0%
CTTGGGGTGTGTGTAGGGCT+TGG + Chr8:19266079-19266098 MsG0880043115.01.T01:CDS 60.0%
GGAGCCGAAACACCGAGCTT+CGG - Chr8:19263536-19263555 None:intergenic 60.0%
GGTACGCGGTACCGTGCTAT+AGG - Chr8:19264130-19264149 None:intergenic 60.0%
! GTAGGGCTTGGGATTGGCGT+TGG + Chr8:19266091-19266110 MsG0880043115.01.T01:CDS 60.0%
!! GCGCTATACCGGTGCTGTAG+TGG + Chr8:19265324-19265343 MsG0880043115.01.T01:intron 60.0%
!! GCTCGGTGTTTCGGCTCCAT+CGG + Chr8:19263538-19263557 MsG0880043115.01.T01:CDS 60.0%
GCGAGGACGGACAGCTCACA+TGG + Chr8:19266020-19266039 MsG0880043115.01.T01:CDS 65.0%
TGGGAGCTGTGCATCCCCCT+TGG + Chr8:19265052-19265071 MsG0880043115.01.T01:intron 65.0%
! GCGGAAGAGGGTGCAGGGAT+TGG - Chr8:19263272-19263291 None:intergenic 65.0%
GGAAGCGGTGGGGCGGAAGA+GGG - Chr8:19263284-19263303 None:intergenic 70.0%
TCGACACGGTCACGGCGGAG+CGG - Chr8:19263305-19263324 None:intergenic 70.0%
! GTGGGGCGGAAGAGGGTGCA+GGG - Chr8:19263277-19263296 None:intergenic 70.0%
ACGGCGGAGCGGAAGCGGTG+GGG - Chr8:19263294-19263313 None:intergenic 75.0%
CACGGCGGAGCGGAAGCGGT+GGG - Chr8:19263295-19263314 None:intergenic 75.0%
CGGAAGCGGTGGGGCGGAAG+AGG - Chr8:19263285-19263304 None:intergenic 75.0%
CGGTCACGGCGGAGCGGAAG+CGG - Chr8:19263299-19263318 None:intergenic 75.0%
TCACGGCGGAGCGGAAGCGG+TGG - Chr8:19263296-19263315 None:intergenic 75.0%
! GGTGGGGCGGAAGAGGGTGC+AGG - Chr8:19263278-19263297 None:intergenic 75.0%
! GCGGAGCGGAAGCGGTGGGG+CGG - Chr8:19263291-19263310 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 19262585 19266712 19262585 ID=MsG0880043115.01;Name=MsG0880043115.01
Chr8 mRNA 19262585 19266712 19262585 ID=MsG0880043115.01.T01;Parent=MsG0880043115.01;Name=MsG0880043115.01.T01;_AED=0.30;_eAED=0.30;_QI=486|1|1|1|1|1|2|541|303
Chr8 exon 19262585 19263751 19262585 ID=MsG0880043115.01.T01:exon:3851;Parent=MsG0880043115.01.T01
Chr8 exon 19265941 19266712 19265941 ID=MsG0880043115.01.T01:exon:3852;Parent=MsG0880043115.01.T01
Chr8 five_prime_UTR 19262585 19263070 19262585 ID=MsG0880043115.01.T01:five_prime_utr;Parent=MsG0880043115.01.T01
Chr8 CDS 19263071 19263751 19263071 ID=MsG0880043115.01.T01:cds;Parent=MsG0880043115.01.T01
Chr8 CDS 19265941 19266171 19265941 ID=MsG0880043115.01.T01:cds;Parent=MsG0880043115.01.T01
Chr8 three_prime_UTR 19266172 19266712 19266172 ID=MsG0880043115.01.T01:three_prime_utr;Parent=MsG0880043115.01.T01
Gene Sequence

>MsG0880043115.01.T01

ATGGATCAAAACGAAGAAGCGATTTCAAAAAGTGAAAACTCATTGAGCTTTTCAACCCTAAAGAGTCATAGATCATGGCTCGAAATTCGTCTCTTCTACGTTCGAATTTCACCTTGTTTAATCGATAGTGTTCCCGAATGTTTAACACTATGTCACCCAAAACGTGAAATCGGTTTTTCTCTTGTAATCAACGGTTCACCAATCCCTGCACCCTCTTCCGCCCCACCGCTTCCGCTCCGCCGTGACCGTGTCGATAAAGAGTCTGCTGAGGTTACCTATGTTAGCACTGATAATGTGAGAATCACAGGTGGTGCTGAGTTTGAGGTGTATGAGAAAGATGGGTTGTTTCTTTGTGGGTCATTGGAACGGTTGGATGTTGATTTGGGAAATGGGTCTGGTTGGGATATGGATTGTCATGTGGCGGTTGGGTCAATTGGATCGGGTTCTTCAGCTTTTTTTAGGCCGAAGCTCGGTGTTTCGGCTCCATCGGTTGAAGTTTATGTTGCTGGATGTTGTTCTGGTGTACCTGTGATTTTGAGTAAGACTATTTCGTTGAGTCCTAGGAGGAGAGTTCCTAGGCATGCTATTTTGGATGCTATTCCTGAAGATGAGGAAATGAATATGATGGAGAAGGATCATGTTAGTGCTATGAATGGATTAATTCCACACCCGAAATTGCAGATAACAGGGTCTGCAGTTGATGATTATGATCTTGATGGTAAGATGGCGAACGGTTTCTACTCTCAAGAAATGTATCTTGGCGAGGACGGACAGCTCACATGGTTCAATGCTGGTGTTAGAGTTGGTGTTGGAATTGGCCTTGGGGTGTGTGTAGGGCTTGGGATTGGCGTTGGATTACTCATGCGTTCATACCAAACGACAACCAGGAATTTTAGGAGAAGGTTTTTCTAA
Protein sequence

>MsG0880043115.01.T01

MDQNEEAISKSENSLSFSTLKSHRSWLEIRLFYVRISPCLIDSVPECLTLCHPKREIGFSLVINGSPIPAPSSAPPLPLRRDRVDKESAEVTYVSTDNVRITGGAEFEVYEKDGLFLCGSLERLDVDLGNGSGWDMDCHVAVGSIGSGSSAFFRPKLGVSAPSVEVYVAGCCSGVPVILSKTISLSPRRRVPRHAILDAIPEDEEMNMMEKDHVSAMNGLIPHPKLQITGSAVDDYDLDGKMANGFYSQEMYLGEDGQLTWFNAGVRVGVGIGLGVCVGLGIGVGLLMRSYQTTTRNFRRRFF*