AlfalfaGEDB | MsG0180000159.01

M. sativa cultivar ZhongmuNo.1 / MsG0180000159.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000159.01.T01	XP_013466092.1	73.889	360	20	5	52	377	18	337	1.60E-176	504

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000159.01.T01	Q8GUH2	33.436	326	126	13	103	377	42	327	7.24E-36	136

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000159.01.T01	A0A072VPR8	73.889	360	20	5	52	377	18	337	7.65e-177	504

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180000140.01	MsG0180000159.01	0.807129	5.878597e-50	3.247920e-47
MsG0180000159.01	MsG0180000599.01	0.801739	7.812516e-49	3.759242e-46
MsG0180000159.01	MsG0180000647.01	0.800042	1.734750e-48	7.996697e-46
MsG0180000159.01	MsG0180001064.01	0.801541	8.575346e-49	4.105936e-46
MsG0180000159.01	MsG0180001105.01	0.836370	9.736666e-57	1.224581e-53
MsG0180000159.01	MsG0180001119.01	0.800575	1.351230e-48	6.313721e-46
MsG0180000159.01	MsG0180004106.01	0.817564	3.088169e-52	2.256730e-49
MsG0180000159.01	MsG0180004112.01	0.802314	5.951222e-49	2.906172e-46
MsG0180000159.01	MsG0180005292.01	0.813546	2.423150e-51	1.587129e-48
MsG0180000159.01	MsG0180005568.01	0.821119	4.782982e-53	3.856923e-50
MsG0180000159.01	MsG0180005829.01	0.814523	1.475242e-51	9.921955e-49
MsG0180000159.01	MsG0180005977.01	-0.806908	6.546651e-50	3.596427e-47
MsG0180000159.01	MsG0280006896.01	0.827277	1.710041e-54	1.643203e-51
MsG0180000159.01	MsG0280006913.01	0.805579	1.247232e-49	6.622347e-47
MsG0180000159.01	MsG0280007118.01	0.806560	7.752848e-50	4.221234e-47
MsG0180000159.01	MsG0280007756.01	0.807747	4.346933e-50	2.440744e-47
MsG0180000159.01	MsG0280008103.01	0.842991	1.843528e-58	2.843661e-55
MsG0180000159.01	MsG0280009507.01	0.802411	5.683669e-49	2.782277e-46
MsG0180000159.01	MsG0280010517.01	0.808601	2.858598e-50	1.641406e-47
MsG0180000159.01	MsG0280010975.01	0.802137	6.469940e-49	3.145081e-46
MsG0180000159.01	MsG0280011029.01	0.801511	8.698586e-49	4.161829e-46
MsG0180000159.01	MsG0280011401.01	0.800860	1.182162e-48	5.563917e-46
MsG0180000159.01	MsG0380011744.01	0.829159	6.017695e-55	6.108798e-52
MsG0180000159.01	MsG0380012249.01	0.801520	8.662444e-49	4.145461e-46
MsG0180000159.01	MsG0380014794.01	0.801634	8.209686e-49	3.940005e-46
MsG0180000159.01	MsG0380017931.01	0.814582	1.431608e-51	9.643532e-49
MsG0180000159.01	MsG0480022589.01	0.802868	4.574039e-49	2.265287e-46
MsG0180000159.01	MsG0480022617.01	0.806801	6.896887e-50	3.778401e-47
MsG0180000159.01	MsG0480022624.01	0.836258	1.039720e-56	1.303442e-53
MsG0180000159.01	MsG0480022918.01	0.822085	2.860774e-53	2.370328e-50
MsG0180000159.01	MsG0480023150.01	0.806629	7.498109e-50	4.089383e-47
MsG0180000159.01	MsG0480023381.01	0.837301	5.633892e-57	7.287163e-54
MsG0180000159.01	MsG0480023578.01	0.838954	2.115669e-57	2.878503e-54
MsG0180000159.01	MsG0580024717.01	0.836180	1.088282e-56	1.361106e-53
MsG0180000159.01	MsG0580025625.01	0.829437	5.149887e-55	5.270587e-52
MsG0180000159.01	MsG0580029414.01	0.835422	1.693322e-56	2.069744e-53
MsG0180000159.01	MsG0680030680.01	0.800342	1.507653e-48	7.003135e-46
MsG0180000159.01	MsG0680033465.01	0.839384	1.636949e-57	2.256962e-54
MsG0180000159.01	MsG0680034032.01	0.800790	1.221783e-48	5.739689e-46
MsG0180000159.01	MsG0680035707.01	0.827430	1.571128e-54	1.516477e-51
MsG0180000159.01	MsG0780036517.01	0.807672	4.507889e-50	2.526113e-47
MsG0180000159.01	MsG0780036567.01	0.841100	5.832055e-58	8.478752e-55
MsG0180000159.01	MsG0780039964.01	0.812684	3.746233e-51	2.397432e-48
MsG0180000159.01	MsG0780039975.01	0.802139	6.465190e-49	3.142878e-46
MsG0180000159.01	MsG0780041187.01	0.823635	1.245740e-53	1.078670e-50
MsG0180000159.01	MsG0780041262.01	0.842211	2.970194e-58	4.471147e-55
MsG0180000159.01	MsG0780041301.01	0.806082	9.773915e-50	5.257139e-47
MsG0180000159.01	MsG0880044043.01	0.815643	8.321408e-52	5.769883e-49
MsG0180000159.01	MsG0880046025.01	0.801326	9.491872e-49	4.520198e-46
MsG0180000159.01	MsG0880046268.01	0.830485	2.860004e-55	3.017217e-52
MsG0180000159.01	MsG0880046723.01	0.823839	1.115755e-53	9.717041e-51
MsG0180000159.01	MsG0880046833.01	0.811906	5.538210e-51	3.470791e-48
MsG0180000159.01	MsG0880047055.01	-0.817816	2.709399e-52	1.993768e-49
MsG0180000159.01	MsG0880047306.01	0.835249	1.872870e-56	2.277502e-53
MsG0180000159.01	MsG0880047368.01	0.841217	5.431039e-58	7.924862e-55
MsG0180000159.01	MsG0880047394.01	0.824676	7.092934e-54	6.326793e-51
MsG0180000159.01	MsG0880047432.01	0.810343	1.208113e-50	7.264044e-48

PPI

Gene1	Gene2	Type
MsG0880043115.01	MsG0180000159.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000159.01.T01	MTR_1g022190	73.889	360	20	5	52	377	18	337	1.94e-180	504
MsG0180000159.01.T01	MTR_1g022190	73.889	360	20	5	52	377	23	342	2.22e-180	504
MsG0180000159.01.T01	MTR_1g022190	73.789	351	19	4	61	377	1	312	1.31e-177	496
MsG0180000159.01.T01	MTR_1g022190	80.603	232	10	2	52	249	18	248	5.27e-127	366
MsG0180000159.01.T01	MTR_4g070020	37.322	351	125	7	73	376	8	310	8.23e-65	209
MsG0180000159.01.T01	MTR_4g070020	40.179	224	83	5	73	249	8	227	1.18e-42	149
MsG0180000159.01.T01	MTR_8g028630	33.025	324	135	12	97	375	15	301	4.34e-35	132

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000159.01.T01	AT1G19400	39.535	344	112	8	79	377	11	303	6.47e-70	222
MsG0180000159.01.T01	AT1G19400	39.535	344	112	8	79	377	11	303	6.47e-70	222
MsG0180000159.01.T01	AT1G19400	39.535	344	112	8	79	377	11	303	6.47e-70	222
MsG0180000159.01.T01	AT1G75180	42.767	318	90	7	108	377	42	315	9.27e-70	222
MsG0180000159.01.T01	AT1G75180	42.767	318	90	7	108	377	42	315	9.27e-70	222
MsG0180000159.01.T01	AT1G19400	41.518	224	79	5	71	249	7	223	8.07e-46	157
MsG0180000159.01.T01	AT1G75180	43.684	190	58	3	108	249	42	230	7.62e-39	139
MsG0180000159.01.T01	AT1G75180	43.684	190	58	3	108	249	42	230	4.01e-38	138
MsG0180000159.01.T01	AT1G01500	33.436	326	126	13	103	377	42	327	7.38e-37	136

Find 72 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTTCAGATGTTTCATATTC+TGG	0.176318	1:-2184437	None:intergenic
CCAAGACAAAATTTCTTCTT+TGG	0.196432	1:-2181785	None:intergenic
TTGTAATGCTCTTCTTCTTC+TGG	0.227081	1:-2186315	None:intergenic
AAAAGTGTATCAGGACTTAA+AGG	0.253465	1:-2184012	None:intergenic
ACAATCAACGAAACAGTTAA+AGG	0.256351	1:-2183703	None:intergenic
ACAGTGTGCCGTCATTATTT+TGG	0.269749	1:-2184597	None:intergenic
AGTGTCCTAGTTAAGATTAT+AGG	0.277513	1:-2184359	None:intergenic
ACAGATAGTATAAGAATAAA+TGG	0.288585	1:+2184138	MsG0180000159.01.T01:CDS
TTCGCAAATTAGTGCATGTT+TGG	0.314188	1:-2184645	None:intergenic
TAAAAGTTTAATGTTGTCAT+TGG	0.320732	1:+2186785	MsG0180000159.01.T01:three_prime_UTR
TCTTTGTAGGAGTTGGTATA+GGG	0.323141	1:+2186439	MsG0180000159.01.T01:CDS
ATGATAATGAGAAGAGATAT+TGG	0.323687	1:+2184229	MsG0180000159.01.T01:CDS
ATTGGACTTGGCATCTTTGT+AGG	0.336752	1:+2186426	MsG0180000159.01.T01:CDS
TGTTTCGTTGATTGTGAAAC+AGG	0.345089	1:+2183711	MsG0180000159.01.T01:CDS
TGAAACTACGAGTAGTTCTT+TGG	0.346111	1:-2186485	None:intergenic
ATCTTTGTAGGAGTTGGTAT+AGG	0.360152	1:+2186438	MsG0180000159.01.T01:CDS
ATTGCAGGAAGAAACATAAT+AGG	0.362814	1:+2184390	MsG0180000159.01.T01:CDS
CTACTTATCTGTGGAAAACT+TGG	0.373522	1:+2186672	MsG0180000159.01.T01:three_prime_UTR
TTTACCTCTAAAAGTGTATC+AGG	0.386768	1:-2184021	None:intergenic
TCTTCTTAACAAGTGCCCTT+AGG	0.392103	1:-2181762	None:intergenic
CTTGGCATCTTTGTAGGAGT+TGG	0.397784	1:+2186432	MsG0180000159.01.T01:CDS
AATTTGCGAAATGTTCCATT+TGG	0.398709	1:+2184658	MsG0180000159.01.T01:CDS
GTAAGAGTTGGTGTTGGAAT+TGG	0.400841	1:+2186408	MsG0180000159.01.T01:CDS
CTTCTTAACAAGTGCCCTTA+GGG	0.413269	1:-2181761	None:intergenic
AATAAATTTCATCTTACAAA+AGG	0.416697	1:-2186532	None:intergenic
AAGATTCTTCAATTCTAAGA+AGG	0.437779	1:+2184073	MsG0180000159.01.T01:CDS
ATTTCTTTAAAAGCCTTTGA+AGG	0.439617	1:-2186735	None:intergenic
GGACACTGCAGATCAATTGC+AGG	0.447539	1:+2184375	MsG0180000159.01.T01:CDS
TTAATGCATGATGGATCATA+AGG	0.452740	1:-2183883	None:intergenic
TATCTATATATCCTTCCCTT+TGG	0.458465	1:-2186350	None:intergenic
TGGAAGATGGTGAGCTATCA+TGG	0.463930	1:+2186373	MsG0180000159.01.T01:CDS
AAGGGAAGGATATATAGATA+TGG	0.466582	1:+2186353	MsG0180000159.01.T01:CDS
TGGTATAGGGGTCAGCCTCT+TGG	0.472718	1:+2186452	MsG0180000159.01.T01:CDS
GATGTTTGTGATCATGATCA+TGG	0.514929	1:+2184466	MsG0180000159.01.T01:CDS
TTTCTTTAAAAGCCTTTGAA+GGG	0.528421	1:-2186734	None:intergenic
AAATGCTAACAAGTGCCCTA+AGG	0.532960	1:+2181746	None:intergenic
AATGATAATTTAATGCATGA+TGG	0.535072	1:-2183892	None:intergenic
GGAAGAAACATAATAGGAAA+GGG	0.537068	1:+2184396	MsG0180000159.01.T01:CDS
GTTGGTGTTGGAATTGGACT+TGG	0.540231	1:+2186414	MsG0180000159.01.T01:CDS
CAACAACATGTATTGCCAAA+GGG	0.547747	1:+2186335	MsG0180000159.01.T01:CDS
AGGAAGAAACATAATAGGAA+AGG	0.549921	1:+2184395	MsG0180000159.01.T01:CDS
GAGCTATCATGGTTCAATGC+TGG	0.554903	1:+2186384	MsG0180000159.01.T01:CDS
TGATCATGGACTTGTTTCAC+AGG	0.556098	1:+2184480	MsG0180000159.01.T01:CDS
GGATATATAGATATGGAAGA+TGG	0.561870	1:+2186360	MsG0180000159.01.T01:CDS
ACTAGGTAGTGCGTACGGTA+TGG	0.566871	1:+2186589	MsG0180000159.01.T01:three_prime_UTR
GAAAGATTGTGTACTAAACA+AGG	0.572805	1:-2186701	None:intergenic
ACTACGAGTAGTTCTTTGGT+AGG	0.574661	1:-2186481	None:intergenic
AGATTCTTCAATTCTAAGAA+GGG	0.575943	1:+2184074	MsG0180000159.01.T01:CDS
AATGCTAACAAGTGCCCTAA+GGG	0.584496	1:+2181747	None:intergenic
CTTTGTAGGAGTTGGTATAG+GGG	0.584980	1:+2186440	MsG0180000159.01.T01:CDS
GAAAACCTATAATCTTAACT+AGG	0.587994	1:+2184354	MsG0180000159.01.T01:CDS
AACATGTATTGCCAAAGGGA+AGG	0.589506	1:+2186339	MsG0180000159.01.T01:CDS
TAATAGGAAAGGGTGCATGT+TGG	0.592411	1:+2184406	MsG0180000159.01.T01:CDS
ACAACAACATGTATTGCCAA+AGG	0.592557	1:+2186334	MsG0180000159.01.T01:CDS
TGATGAAGATATAGAAATTG+TGG	0.597506	1:-2183985	None:intergenic
TTCAGGCAAAATTACATCAG+CGG	0.600431	1:+2183679	MsG0180000159.01.T01:intron
AAAGGGCAACTACTTATCTG+TGG	0.604818	1:+2186663	MsG0180000159.01.T01:three_prime_UTR
TATGATGCATCATCATGCAA+TGG	0.618243	1:+2183817	MsG0180000159.01.T01:CDS
CTACTCGTAGTTTCAAGAGG+AGG	0.625683	1:+2186493	MsG0180000159.01.T01:CDS
GAACTACTCGTAGTTTCAAG+AGG	0.629061	1:+2186490	MsG0180000159.01.T01:CDS
GATGCATCATCATGCAATGG+AGG	0.630369	1:+2183820	MsG0180000159.01.T01:CDS
CTACCACTAGGTAGTGCGTA+CGG	0.636113	1:+2186584	MsG0180000159.01.T01:three_prime_UTR
TTATATCTAGGAATCAAACT+CGG	0.636343	1:-2186639	None:intergenic
GCTGGAGTAAGAGTTGGTGT+TGG	0.644565	1:+2186402	MsG0180000159.01.T01:CDS
AAAGATTGTGTACTAAACAA+GGG	0.649643	1:-2186700	None:intergenic
TTCAATGCTGGAGTAAGAGT+TGG	0.649924	1:+2186396	MsG0180000159.01.T01:CDS
AAGATATAGAAATTGTGGTG+TGG	0.664213	1:-2183980	None:intergenic
TCAATTACTTATCTACCACT+AGG	0.665223	1:+2186572	MsG0180000159.01.T01:three_prime_UTR
AAAACTCTTACATCAAACCA+AGG	0.678998	1:-2183922	None:intergenic
GCATGTTTGGATTGACAGTG+AGG	0.682010	1:-2184632	None:intergenic
TTTGGTAGGAACGTGCCAAG+AGG	0.697390	1:-2186467	None:intergenic
ATACCGTACGCACTACCTAG+TGG	0.715828	1:-2186587	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAATATATTAAGAAAGTAT+AGG	-	Chr1:2183078-2183097	None:intergenic	10.0%
!!	AAATTAGAATGAAAATGAAA+TGG	-	Chr1:2183494-2183513	None:intergenic	15.0%
!!	AACAAGAAAAACAAATTAAA+AGG	-	Chr1:2183637-2183656	None:intergenic	15.0%
!!	AATAAATTTCATCTTACAAA+AGG	-	Chr1:2186535-2186554	None:intergenic	15.0%
!!	ACATATATCTAGTTATAAAA+TGG	+	Chr1:2186193-2186212	MsG0180000159.01.T01:intron	15.0%
!!	ACTATCTATTAGATTAAATT+TGG	+	Chr1:2185410-2185429	MsG0180000159.01.T01:intron	15.0%
!!!	AAATTTAATTCCTATTTTTC+AGG	-	Chr1:2183354-2183373	None:intergenic	15.0%
!!!	ACATATCTTTTATTAACTAT+TGG	+	Chr1:2185019-2185038	MsG0180000159.01.T01:intron	15.0%
!!!	ATTAACAATTTTAGTGATTT+TGG	+	Chr1:2183774-2183793	MsG0180000159.01.T01:CDS	15.0%
!!!	ATTTATTTTGTAATACTTGT+AGG	-	Chr1:2183043-2183062	None:intergenic	15.0%
!!!	CATATCTTTTATTAACTATT+GGG	+	Chr1:2185020-2185039	MsG0180000159.01.T01:intron	15.0%
!!!	TATTAATGTTATCTATGTTT+TGG	+	Chr1:2184907-2184926	MsG0180000159.01.T01:intron	15.0%
!!!	TTTATGTTTTAATCTATACA+TGG	+	Chr1:2186020-2186039	MsG0180000159.01.T01:intron	15.0%
!!	AATAAAAGATATGTGTATTG+TGG	-	Chr1:2185013-2185032	None:intergenic	20.0%
!!	AATGATAATTTAATGCATGA+TGG	-	Chr1:2183895-2183914	None:intergenic	20.0%
!!	AATTTAGTACCTTTAGATAT+TGG	+	Chr1:2184937-2184956	MsG0180000159.01.T01:intron	20.0%
!!	AATTTATTTACCATGTTACT+TGG	+	Chr1:2186138-2186157	MsG0180000159.01.T01:intron	20.0%
!!	ACACAAAATATGAAATCTAA+AGG	-	Chr1:2183614-2183633	None:intergenic	20.0%
!!	ACAGATAGTATAAGAATAAA+TGG	+	Chr1:2184138-2184157	MsG0180000159.01.T01:CDS	20.0%
!!	ATCGAAAAACAATAATAACA+TGG	-	Chr1:2181927-2181946	None:intergenic	20.0%
!!	CAAATCTATGTGTTTATTTA+AGG	-	Chr1:2183387-2183406	None:intergenic	20.0%
!!	CAATTTGTGAAATCTAATAT+TGG	+	Chr1:2182010-2182029	MsG0180000159.01.T01:intron	20.0%
!!	CACAAAATATGAAATCTAAA+GGG	-	Chr1:2183613-2183632	None:intergenic	20.0%
!!	TAAAAGTTTAATGTTGTCAT+TGG	+	Chr1:2186785-2186804	MsG0180000159.01.T01:three_prime_UTR	20.0%
!!	TCGAAAAACAATAATAACAT+GGG	-	Chr1:2181926-2181945	None:intergenic	20.0%
!!	TGATTCCTAGATATAAAAAA+GGG	+	Chr1:2186646-2186665	MsG0180000159.01.T01:three_prime_UTR	20.0%
!!	TGTTTGAAGACATTTATTAT+TGG	-	Chr1:2182843-2182862	None:intergenic	20.0%
!!	TTGATTCCTAGATATAAAAA+AGG	+	Chr1:2186645-2186664	MsG0180000159.01.T01:three_prime_UTR	20.0%
!!	TTTATGCATTAATCTATACA+TGG	+	Chr1:2186058-2186077	MsG0180000159.01.T01:intron	20.0%
!!!	AAATTTTACAGATGCTTAAA+AGG	-	Chr1:2186123-2186142	None:intergenic	20.0%
!!!	AATTATCATTTTCATTACCT+TGG	+	Chr1:2183905-2183924	MsG0180000159.01.T01:CDS	20.0%
!!!	AGATACTTTCTTAAGATTTT+TGG	+	Chr1:2183004-2183023	MsG0180000159.01.T01:intron	20.0%
!!!	ATAGATGGTTTTTTTTCTTA+AGG	+	Chr1:2182399-2182418	MsG0180000159.01.T01:intron	20.0%
!!!	ATAGGAATTAAATTTGTTTG+TGG	+	Chr1:2183359-2183378	MsG0180000159.01.T01:intron	20.0%
!!!	ATCATAATTTTCACTATCAT+GGG	+	Chr1:2184692-2184711	MsG0180000159.01.T01:intron	20.0%
!!!	ATGAATAGTTCAATTTTTCA+TGG	+	Chr1:2183315-2183334	MsG0180000159.01.T01:intron	20.0%
!!!	ATGTATTTTATGTCATAGAT+TGG	+	Chr1:2182724-2182743	MsG0180000159.01.T01:intron	20.0%
!!!	TATCATAATTTTCACTATCA+TGG	+	Chr1:2184691-2184710	MsG0180000159.01.T01:intron	20.0%
!!!	TGACTAATTGACTATATTTT+CGG	+	Chr1:2184778-2184797	MsG0180000159.01.T01:intron	20.0%
!!!	TGATAAATTTAGAGTAGAAA+AGG	-	Chr1:2181849-2181868	None:intergenic	20.0%
!!!	TGTATTTTATGTCATAGATT+GGG	+	Chr1:2182725-2182744	MsG0180000159.01.T01:intron	20.0%
!!!	TTTTGTTTATATTTGAGACA+GGG	-	Chr1:2185207-2185226	None:intergenic	20.0%
!!!	TTTTTGTTTATATTTGAGAC+AGG	-	Chr1:2185208-2185227	None:intergenic	20.0%
!	AAAAAAATAAGATGACGAGA+TGG	-	Chr1:2182754-2182773	None:intergenic	25.0%
!	AAAAATGATGTAGACTTTGA+TGG	+	Chr1:2183751-2183770	MsG0180000159.01.T01:CDS	25.0%
!	AAAGATTGTGTACTAAACAA+GGG	-	Chr1:2186703-2186722	None:intergenic	25.0%
!	AAATAAATGGGCCAAATATA+GGG	-	Chr1:2185942-2185961	None:intergenic	25.0%
!	AACTAGATATATGTTGTTGA+AGG	-	Chr1:2186187-2186206	None:intergenic	25.0%
!	AAGAGCAAAGGAAAATTAAA+AGG	+	Chr1:2182981-2183000	MsG0180000159.01.T01:intron	25.0%
!	AATCTATACATGGATTTACT+TGG	+	Chr1:2186030-2186049	MsG0180000159.01.T01:intron	25.0%
!	ACAAGAAAACAGTATTATCA+AGG	-	Chr1:2184829-2184848	None:intergenic	25.0%
!	ATGAATTGTGAAACAGAAAT+GGG	+	Chr1:2184255-2184274	MsG0180000159.01.T01:intron	25.0%
!	ATTTCAGATGTTTCATATTC+TGG	-	Chr1:2184440-2184459	None:intergenic	25.0%
!	CAAATTTGTACCATAATAGA+AGG	-	Chr1:2185551-2185570	None:intergenic	25.0%
!	CAAGAAAACAGTATTATCAA+GGG	-	Chr1:2184828-2184847	None:intergenic	25.0%
!	CACTTCATATAGTAATTACT+AGG	-	Chr1:2183413-2183432	None:intergenic	25.0%
!	CTGAAAATAAACTATGACAA+AGG	+	Chr1:2182663-2182682	MsG0180000159.01.T01:intron	25.0%
!	GAAAACCTATAATCTTAACT+AGG	+	Chr1:2184354-2184373	MsG0180000159.01.T01:CDS	25.0%
!	GAATGAAAATGAAATGGAAA+AGG	-	Chr1:2183488-2183507	None:intergenic	25.0%
!	GAGTTTATTTCCTGAAAAAT+AGG	+	Chr1:2183341-2183360	MsG0180000159.01.T01:intron	25.0%
!	TACAAGTCACAAGATAAAAA+TGG	-	Chr1:2183544-2183563	None:intergenic	25.0%
!	TATGAATTGTGAAACAGAAA+TGG	+	Chr1:2184254-2184273	MsG0180000159.01.T01:intron	25.0%
!	TATTATCCACAAAAATTGCA+TGG	-	Chr1:2184736-2184755	None:intergenic	25.0%
!	TGAAATAAACGTATTACTGA+AGG	+	Chr1:2185629-2185648	MsG0180000159.01.T01:intron	25.0%
!	TGATGAAGATATAGAAATTG+TGG	-	Chr1:2183988-2184007	None:intergenic	25.0%
!	TGGAATTTCAAAGTATATTC+AGG	+	Chr1:2182030-2182049	MsG0180000159.01.T01:intron	25.0%
!	TTATATCTAGGAATCAAACT+CGG	-	Chr1:2186642-2186661	None:intergenic	25.0%
!	TTATCAAAGTAAAAGAGCAA+AGG	+	Chr1:2182969-2182988	MsG0180000159.01.T01:intron	25.0%
!	TTTATGTTTCTCTTGAGTTT+AGG	-	Chr1:2185596-2185615	None:intergenic	25.0%
!!	AAAGTTTTCTTTGAACCTTA+AGG	+	Chr1:2182529-2182548	MsG0180000159.01.T01:intron	25.0%
!!	AAGAAATTTTGTCTTGGAAA+TGG	+	Chr1:2181791-2181810	MsG0180000159.01.T01:CDS	25.0%
!!	AAGATTCTTCAATTCTAAGA+AGG	+	Chr1:2184073-2184092	MsG0180000159.01.T01:CDS	25.0%
!!	AGATTCTTCAATTCTAAGAA+GGG	+	Chr1:2184074-2184093	MsG0180000159.01.T01:CDS	25.0%
!!	ATCTATACATGGATTTTCTT+AGG	+	Chr1:2186069-2186088	MsG0180000159.01.T01:intron	25.0%
!!	ATGATAATGAGAAGAGATAT+TGG	+	Chr1:2184229-2184248	MsG0180000159.01.T01:CDS	25.0%
!!	ATTGACTATATTTTCGGAAT+TGG	+	Chr1:2184784-2184803	MsG0180000159.01.T01:intron	25.0%
!!	ATTTCTTTAAAAGCCTTTGA+AGG	-	Chr1:2186738-2186757	None:intergenic	25.0%
!!	GTATTTTATGTCATAGATTG+GGG	+	Chr1:2182726-2182745	MsG0180000159.01.T01:intron	25.0%
!!	TATTTTGTCAAAAAACCCTA+TGG	-	Chr1:2185698-2185717	None:intergenic	25.0%
!!	TCAAATACATTTTCTGAACA+TGG	-	Chr1:2182147-2182166	None:intergenic	25.0%
!!	TTTCTTTAAAAGCCTTTGAA+GGG	-	Chr1:2186737-2186756	None:intergenic	25.0%
!!!	ATCTAAAGGTACTAAATTAG+AGG	-	Chr1:2184935-2184954	None:intergenic	25.0%
!!!	ATGTTCTTGTTTTGTTTTGA+AGG	+	Chr1:2186756-2186775	MsG0180000159.01.T01:three_prime_UTR	25.0%
!!!	GTTTTTTATGTAAGAGTTAG+TGG	+	Chr1:2183940-2183959	MsG0180000159.01.T01:CDS	25.0%
!!!	TAGTAATAACTTAGCTTGTT+TGG	+	Chr1:2186255-2186274	MsG0180000159.01.T01:intron	25.0%
!!!	TCTAAAGGTACTAAATTAGA+GGG	-	Chr1:2184934-2184953	None:intergenic	25.0%
	AAAACTCTTACATCAAACCA+AGG	-	Chr1:2183925-2183944	None:intergenic	30.0%
	AAGATATAGAAATTGTGGTG+TGG	-	Chr1:2183983-2184002	None:intergenic	30.0%
	AAGGGAAGGATATATAGATA+TGG	+	Chr1:2186353-2186372	MsG0180000159.01.T01:CDS	30.0%
	AATAAATGGGCCAAATATAG+GGG	-	Chr1:2185941-2185960	None:intergenic	30.0%
	AATAGAGACAAAAATACCGA+CGG	-	Chr1:2182884-2182903	None:intergenic	30.0%
	AATCTATTTACAAGGGACAT+TGG	-	Chr1:2185085-2185104	None:intergenic	30.0%
	AATGTTCCATTTGGTCTATT+AGG	+	Chr1:2184667-2184686	MsG0180000159.01.T01:intron	30.0%
	AATTTGCGAAATGTTCCATT+TGG	+	Chr1:2184658-2184677	MsG0180000159.01.T01:CDS	30.0%
	ACAATCAACGAAACAGTTAA+AGG	-	Chr1:2183706-2183725	None:intergenic	30.0%
	ACTGTAACCAAATACATACA+TGG	+	Chr1:2185797-2185816	MsG0180000159.01.T01:intron	30.0%
	AGGAAGAAACATAATAGGAA+AGG	+	Chr1:2184395-2184414	MsG0180000159.01.T01:CDS	30.0%
	AGGTCAGAATCTATTTACAA+GGG	-	Chr1:2185092-2185111	None:intergenic	30.0%
	AGTCGCAAAATGTTTATAGA+TGG	+	Chr1:2182384-2182403	MsG0180000159.01.T01:intron	30.0%
	AGTGTCCTAGTTAAGATTAT+AGG	-	Chr1:2184362-2184381	None:intergenic	30.0%
	ATGAAATCTAAAGGGAAGAA+AGG	-	Chr1:2183605-2183624	None:intergenic	30.0%
	ATTGCAGGAAGAAACATAAT+AGG	+	Chr1:2184390-2184409	MsG0180000159.01.T01:CDS	30.0%
	CAAATAAATGGGCCAAATAT+AGG	-	Chr1:2185943-2185962	None:intergenic	30.0%
	CAAATTAAGTCCAAGTAACA+TGG	-	Chr1:2186151-2186170	None:intergenic	30.0%
	CCAAGACAAAATTTCTTCTT+TGG	-	Chr1:2181788-2181807	None:intergenic	30.0%
	CTACATGATAAGATATAGCT+TGG	-	Chr1:2182238-2182257	None:intergenic	30.0%
	GAAAGATTGTGTACTAAACA+AGG	-	Chr1:2186704-2186723	None:intergenic	30.0%
	GAATATAGATGAGTGAAATG+TGG	+	Chr1:2182426-2182445	MsG0180000159.01.T01:intron	30.0%
	GACACAACATACAGAAAATA+AGG	-	Chr1:2185149-2185168	None:intergenic	30.0%
	GAGAAAAGGTAGTTATAAGA+AGG	-	Chr1:2185753-2185772	None:intergenic	30.0%
	GCAATCAAATTCTTAAACCA+AGG	-	Chr1:2183227-2183246	None:intergenic	30.0%
	GGAAGAAACATAATAGGAAA+GGG	+	Chr1:2184396-2184415	MsG0180000159.01.T01:CDS	30.0%
	GGATATATAGATATGGAAGA+TGG	+	Chr1:2186360-2186379	MsG0180000159.01.T01:CDS	30.0%
	TATCTATATATCCTTCCCTT+TGG	-	Chr1:2186353-2186372	None:intergenic	30.0%
	TATGAGTTTGATGAAACACA+GGG	+	Chr1:2184541-2184560	MsG0180000159.01.T01:intron	30.0%
	TCAATCTACTCCTTCTATTA+TGG	+	Chr1:2185538-2185557	MsG0180000159.01.T01:intron	30.0%
	TCAATTACTTATCTACCACT+AGG	+	Chr1:2186572-2186591	MsG0180000159.01.T01:three_prime_UTR	30.0%
	TCGAGTTTGTACAATATTTC+AGG	+	Chr1:2183662-2183681	MsG0180000159.01.T01:intron	30.0%
	TGAACAACCATGTATGTATT+TGG	-	Chr1:2185807-2185826	None:intergenic	30.0%
	TGAAGCAACAAATGATTATG+CGG	-	Chr1:2182350-2182369	None:intergenic	30.0%
	TGATATCCTAATAGACCAAA+TGG	-	Chr1:2184676-2184695	None:intergenic	30.0%
	TGGACCTTAGACAAATAAAT+GGG	-	Chr1:2185954-2185973	None:intergenic	30.0%
	TTCAGAAATTAATTCCCACT+TGG	-	Chr1:2182648-2182667	None:intergenic	30.0%
	TTGGACCTTAGACAAATAAA+TGG	-	Chr1:2185955-2185974	None:intergenic	30.0%
!	AAAAGTGTATCAGGACTTAA+AGG	-	Chr1:2184015-2184034	None:intergenic	30.0%
!	AAGGAGTAGATTGAAAGTTT+TGG	-	Chr1:2185532-2185551	None:intergenic	30.0%
!	ACCTTTTCTCTCAAGTATAT+TGG	+	Chr1:2185763-2185782	MsG0180000159.01.T01:intron	30.0%
!	AGCTTTTGCCAAAATAATGA+CGG	+	Chr1:2184589-2184608	MsG0180000159.01.T01:CDS	30.0%
!	AGGAGTAGATTGAAAGTTTT+GGG	-	Chr1:2185531-2185550	None:intergenic	30.0%
!	AGTGATTTTGGATATGAAGA+TGG	+	Chr1:2183786-2183805	MsG0180000159.01.T01:CDS	30.0%
!	CCAAAGAAGAAATTTTGTCT+TGG	+	Chr1:2181785-2181804	MsG0180000159.01.T01:CDS	30.0%
!	CCTTTGAAAAAACCACTATT+AGG	-	Chr1:2184282-2184301	None:intergenic	30.0%
!	GTGATTTTGGATATGAAGAT+GGG	+	Chr1:2183787-2183806	MsG0180000159.01.T01:CDS	30.0%
!	TAGAAGGTGTGTTGTTAAAA+TGG	+	Chr1:2185482-2185501	MsG0180000159.01.T01:intron	30.0%
!	TTTACCTCTAAAAGTGTATC+AGG	-	Chr1:2184024-2184043	None:intergenic	30.0%
!!	ACAACTTTTAATTGCGTGTT+TGG	+	Chr1:2184512-2184531	MsG0180000159.01.T01:intron	30.0%
!!	GATACACTTTTAGAGGTAAA+TGG	+	Chr1:2184024-2184043	MsG0180000159.01.T01:CDS	30.0%
!!	TGCTTAAAAGGTTTGCTAAA+TGG	-	Chr1:2186111-2186130	None:intergenic	30.0%
!!	TTAATGCATGATGGATCATA+AGG	-	Chr1:2183886-2183905	None:intergenic	30.0%
!!!	ACTTCTAGGATAGGATTTTT+GGG	-	Chr1:2184964-2184983	None:intergenic	30.0%
!!!	AGTTGCCCTTTTTTATATCT+AGG	-	Chr1:2186654-2186673	None:intergenic	30.0%
!!!	CCTAATAGTGGTTTTTTCAA+AGG	+	Chr1:2184279-2184298	MsG0180000159.01.T01:intron	30.0%
!!!	TAACTTAGCTTGTTTGGTTT+TGG	+	Chr1:2186261-2186280	MsG0180000159.01.T01:intron	30.0%
!!!	TTTTTGGGACCAATATCTAA+AGG	-	Chr1:2184949-2184968	None:intergenic	30.0%
	AAGAAAGAGAACTTGAGTGA+AGG	-	Chr1:2183574-2183593	None:intergenic	35.0%
	ACAACAACATGTATTGCCAA+AGG	+	Chr1:2186334-2186353	MsG0180000159.01.T01:CDS	35.0%
	ACCAGTACTTGTCCTTTAAT+GGG	-	Chr1:2185116-2185135	None:intergenic	35.0%
	AGAAAACAAAACACGAGACA+TGG	-	Chr1:2182064-2182083	None:intergenic	35.0%
	AGAAAGGTGAGCAAATTTGT+GGG	+	Chr1:2185882-2185901	MsG0180000159.01.T01:intron	35.0%
	AGCAACCATCGAATACATAT+CGG	+	Chr1:2185913-2185932	MsG0180000159.01.T01:intron	35.0%
	ATGTGGACAGAAGATATGAA+AGG	+	Chr1:2183199-2183218	MsG0180000159.01.T01:intron	35.0%
	CAACAACATGTATTGCCAAA+GGG	+	Chr1:2186335-2186354	MsG0180000159.01.T01:CDS	35.0%
	CAGATGAATGTACATCTAGA+AGG	+	Chr1:2185466-2185485	MsG0180000159.01.T01:intron	35.0%
	CGTAATCATATGTATCGTGT+CGG	+	Chr1:2185329-2185348	MsG0180000159.01.T01:intron	35.0%
	CGTTATTACACATGTTATGC+AGG	-	Chr1:2182622-2182641	None:intergenic	35.0%
	CTAAAAGCAGATACTGTGTT+AGG	-	Chr1:2185986-2186005	None:intergenic	35.0%
	CTACTTATCTGTGGAAAACT+TGG	+	Chr1:2186672-2186691	MsG0180000159.01.T01:three_prime_UTR	35.0%
	CTATGAGTTTGATGAAACAC+AGG	+	Chr1:2184540-2184559	MsG0180000159.01.T01:intron	35.0%
	CTTCTAGATGTACATTCATC+TGG	-	Chr1:2185468-2185487	None:intergenic	35.0%
	GAAATTGAGGTTTATGTTGC+TGG	+	Chr1:2184320-2184339	MsG0180000159.01.T01:intron	35.0%
	GAACATAGCGAATCAAGATT+CGG	+	Chr1:2182571-2182590	MsG0180000159.01.T01:intron	35.0%
	GAGGTCAGAATCTATTTACA+AGG	-	Chr1:2185093-2185112	None:intergenic	35.0%
	GATGTTTGTGATCATGATCA+TGG	+	Chr1:2184466-2184485	MsG0180000159.01.T01:CDS	35.0%
	GCAACATAAACCTCAATTTC+AGG	-	Chr1:2184320-2184339	None:intergenic	35.0%
	GCCAATATACTTGAGAGAAA+AGG	-	Chr1:2185767-2185786	None:intergenic	35.0%
	GTGTAATAACGTATCCAAGT+GGG	+	Chr1:2182631-2182650	MsG0180000159.01.T01:intron	35.0%
	GTTGTTGAAGGACTAATACT+AGG	-	Chr1:2186175-2186194	None:intergenic	35.0%
	TACATACATGGTTGTTCAGT+AGG	+	Chr1:2185809-2185828	MsG0180000159.01.T01:intron	35.0%
	TATGATGCATCATCATGCAA+TGG	+	Chr1:2183817-2183836	MsG0180000159.01.T01:CDS	35.0%
	TATTCTTAACAAGTGCCCTA+AGG	+	Chr1:2181885-2181904	MsG0180000159.01.T01:intron	35.0%
	TGAAACTACGAGTAGTTCTT+TGG	-	Chr1:2186488-2186507	None:intergenic	35.0%
	TGCTTAGAGAACACTTTCAA+AGG	-	Chr1:2182701-2182720	None:intergenic	35.0%
	TGTGTAATAACGTATCCAAG+TGG	+	Chr1:2182630-2182649	MsG0180000159.01.T01:intron	35.0%
	TTCAGGCAAAATTACATCAG+CGG	+	Chr1:2183679-2183698	MsG0180000159.01.T01:intron	35.0%
	TTCGCAAATTAGTGCATGTT+TGG	-	Chr1:2184648-2184667	None:intergenic	35.0%
	TTCGGAATTGGAATAAGATG+TGG	+	Chr1:2184796-2184815	MsG0180000159.01.T01:intron	35.0%
	TTGGCCCATTTATTTGTCTA+AGG	+	Chr1:2185947-2185966	MsG0180000159.01.T01:intron	35.0%
	TTGTAATGCTCTTCTTCTTC+TGG	-	Chr1:2186318-2186337	None:intergenic	35.0%
!	AAGTCCTGATACACTTTTAG+AGG	+	Chr1:2184017-2184036	MsG0180000159.01.T01:CDS	35.0%
!	ATTTTGGATATGAAGATGGG+AGG	+	Chr1:2183790-2183809	MsG0180000159.01.T01:CDS	35.0%
!	CCTTTCTGAAAAAAGTCGAT+CGG	-	Chr1:2185869-2185888	None:intergenic	35.0%
!	CTTTCTGAAAAAAGTCGATC+GGG	-	Chr1:2185868-2185887	None:intergenic	35.0%
!	CTTTTGCCATGCAATTTTTG+TGG	+	Chr1:2184727-2184746	MsG0180000159.01.T01:intron	35.0%
!	TGTTTCGTTGATTGTGAAAC+AGG	+	Chr1:2183711-2183730	MsG0180000159.01.T01:CDS	35.0%
!	TGTTTCTGTTCCTGAAATTG+AGG	+	Chr1:2184307-2184326	MsG0180000159.01.T01:intron	35.0%
!!	ACTGTGTTAGGTATTGGATT+TGG	-	Chr1:2185974-2185993	None:intergenic	35.0%
!!	AGAAGATATGAAAGGTACCT+TGG	+	Chr1:2183207-2183226	MsG0180000159.01.T01:intron	35.0%
!!	ATCTTTGTAGGAGTTGGTAT+AGG	+	Chr1:2186438-2186457	MsG0180000159.01.T01:CDS	35.0%
!!	TCTTTGTAGGAGTTGGTATA+GGG	+	Chr1:2186439-2186458	MsG0180000159.01.T01:CDS	35.0%
!!!	ATGTCTCGTGTTTTGTTTTC+TGG	+	Chr1:2182063-2182082	MsG0180000159.01.T01:intron	35.0%
!!!	CACTTCTAGGATAGGATTTT+TGG	-	Chr1:2184965-2184984	None:intergenic	35.0%
!!!	CTTGTTTGGTTTTGGTTCAT+AGG	+	Chr1:2186269-2186288	MsG0180000159.01.T01:intron	35.0%
	AAAACACGAGACATGGTGAT+GGG	-	Chr1:2182057-2182076	None:intergenic	40.0%
	AAAGAGAACTTGAGTGAAGG+TGG	-	Chr1:2183571-2183590	None:intergenic	40.0%
	AAAGGGCAACTACTTATCTG+TGG	+	Chr1:2186663-2186682	MsG0180000159.01.T01:three_prime_UTR	40.0%
	AACATGTATTGCCAAAGGGA+AGG	+	Chr1:2186339-2186358	MsG0180000159.01.T01:CDS	40.0%
	ACAGAAATGGGACCTAATAG+TGG	+	Chr1:2184267-2184286	MsG0180000159.01.T01:intron	40.0%
	ACTACGAGTAGTTCTTTGGT+AGG	-	Chr1:2186484-2186503	None:intergenic	40.0%
	ATAACCTATGTCTCCCCTAA+TGG	+	Chr1:2185718-2185737	MsG0180000159.01.T01:intron	40.0%
	ATACCGACGGAAACATTTGA+AGG	-	Chr1:2182871-2182890	None:intergenic	40.0%
	ATCAAGATTCGGATCCATAC+TGG	+	Chr1:2182582-2182601	MsG0180000159.01.T01:intron	40.0%
	ATGAAGCACAGACATAGACA+CGG	+	Chr1:2185241-2185260	MsG0180000159.01.T01:intron	40.0%
	ATTCGCTATGTTCTCATCCA+AGG	-	Chr1:2182564-2182583	None:intergenic	40.0%
	ATTGGACTTGGCATCTTTGT+AGG	+	Chr1:2186426-2186445	MsG0180000159.01.T01:CDS	40.0%
	CACCAGTACTTGTCCTTTAA+TGG	-	Chr1:2185117-2185136	None:intergenic	40.0%
	CAGAAAGGTGAGCAAATTTG+TGG	+	Chr1:2185881-2185900	MsG0180000159.01.T01:intron	40.0%
	CCAGTACTTGTCCTTTAATG+GGG	-	Chr1:2185115-2185134	None:intergenic	40.0%
	CTCTCTCTGTCTAAACCATA+GGG	+	Chr1:2185680-2185699	MsG0180000159.01.T01:intron	40.0%
	CTTCTTAACAAGTGCCCTTA+GGG	-	Chr1:2181764-2181783	None:intergenic	40.0%
	CTTTCAATGTACCACAAGAG+AGG	-	Chr1:2182513-2182532	None:intergenic	40.0%
	GAAAGGTGAGCAAATTTGTG+GGG	+	Chr1:2185883-2185902	MsG0180000159.01.T01:intron	40.0%
	GAAATGGTGCATTCAATGCA+TGG	+	Chr1:2181807-2181826	MsG0180000159.01.T01:intron	40.0%
	GAACTACTCGTAGTTTCAAG+AGG	+	Chr1:2186490-2186509	MsG0180000159.01.T01:CDS	40.0%
	GATCCTTCAAATGTTTCCGT+CGG	+	Chr1:2182865-2182884	MsG0180000159.01.T01:intron	40.0%
	GATTGCATTATAAGCATGCG+TGG	+	Chr1:2183241-2183260	MsG0180000159.01.T01:intron	40.0%
	GCAGATACTGTGTTAGGTAT+TGG	-	Chr1:2185980-2185999	None:intergenic	40.0%
	GTATTCGATGGTTGCTCAAT+AGG	-	Chr1:2185909-2185928	None:intergenic	40.0%
	TCAAGATTCGGATCCATACT+GGG	+	Chr1:2182583-2182602	MsG0180000159.01.T01:intron	40.0%
	TCTCTCTCTGTCTAAACCAT+AGG	+	Chr1:2185679-2185698	MsG0180000159.01.T01:intron	40.0%
	TCTTCTTAACAAGTGCCCTT+AGG	-	Chr1:2181765-2181784	None:intergenic	40.0%
	TCTTGCTAACAAGTGCCTTA+GGG	-	Chr1:2181903-2181922	None:intergenic	40.0%
	TTCAATGCTGGAGTAAGAGT+TGG	+	Chr1:2186396-2186415	MsG0180000159.01.T01:CDS	40.0%
	TTTGGTTACAGTTGCTGATG+TGG	-	Chr1:2185789-2185808	None:intergenic	40.0%
!	ACAGTGTGCCGTCATTATTT+TGG	-	Chr1:2184600-2184619	None:intergenic	40.0%
!	TAATAGGAAAGGGTGCATGT+TGG	+	Chr1:2184406-2184425	MsG0180000159.01.T01:CDS	40.0%
!	TAGAAGTGTGACTGTTGCAT+GGG	+	Chr1:2184977-2184996	MsG0180000159.01.T01:intron	40.0%
!	TCATTTTCTGTGCCCTTCAA+AGG	+	Chr1:2186722-2186741	MsG0180000159.01.T01:three_prime_UTR	40.0%
!	TGATCATGGACTTGTTTCAC+AGG	+	Chr1:2184480-2184499	MsG0180000159.01.T01:CDS	40.0%
!	TTTGTTGCTTCAAGTGTGAG+TGG	+	Chr1:2182358-2182377	MsG0180000159.01.T01:intron	40.0%
!!	AAAGGACAAGTACTGGTGTT+GGG	+	Chr1:2185119-2185138	MsG0180000159.01.T01:intron	40.0%
!!	AACAGTCACACTTCTAGGAT+AGG	-	Chr1:2184973-2184992	None:intergenic	40.0%
!!	CTTTGTAGGAGTTGGTATAG+GGG	+	Chr1:2186440-2186459	MsG0180000159.01.T01:CDS	40.0%
!!	GTAAGAGTTGGTGTTGGAAT+TGG	+	Chr1:2186408-2186427	MsG0180000159.01.T01:CDS	40.0%
!!	TAAAGGACAAGTACTGGTGT+TGG	+	Chr1:2185118-2185137	MsG0180000159.01.T01:intron	40.0%
!!	TATGAAGCACTGATACTCCT+CGG	-	Chr1:2185391-2185410	None:intergenic	40.0%
!!	TATGTTGCTGGTTGTTTCTC+AGG	+	Chr1:2184332-2184351	MsG0180000159.01.T01:intron	40.0%
!!!	ACCAAAAGTTTTAGAGCACG+AGG	-	Chr1:2181974-2181993	None:intergenic	40.0%
!!!	CCGATCGACTTTTTTCAGAA+AGG	+	Chr1:2185866-2185885	MsG0180000159.01.T01:intron	40.0%
!!!	TCGTGCTCTAAAACTTTTGG+TGG	+	Chr1:2181973-2181992	MsG0180000159.01.T01:intron	40.0%
	ATCCATACTGGGACTACAAG+AGG	+	Chr1:2182594-2182613	MsG0180000159.01.T01:intron	45.0%
	ATTATAAGCATGCGTGGCTG+TGG	+	Chr1:2183247-2183266	MsG0180000159.01.T01:intron	45.0%
	CAAAACACGAGACATGGTGA+TGG	-	Chr1:2182058-2182077	None:intergenic	45.0%
	CATAATCTAAGTCCTTCCCC+CGG	-	Chr1:2183182-2183201	None:intergenic	45.0%
	CATGCAACAGTCACACTTCT+AGG	-	Chr1:2184978-2184997	None:intergenic	45.0%
	CCAAGGCACACAATACCTTA+AGG	-	Chr1:2182547-2182566	None:intergenic	45.0%
	CCCCATTAAAGGACAAGTAC+TGG	+	Chr1:2185112-2185131	MsG0180000159.01.T01:intron	45.0%
	CTACTCGTAGTTTCAAGAGG+AGG	+	Chr1:2186493-2186512	MsG0180000159.01.T01:CDS	45.0%
	CTCTCAATTTCGCTCCTGAT+CGG	+	Chr1:2185833-2185852	MsG0180000159.01.T01:intron	45.0%
	CTTACCATTAGGGGAGACAT+AGG	-	Chr1:2185725-2185744	None:intergenic	45.0%
	CTTGGCATCTTTGTAGGAGT+TGG	+	Chr1:2186432-2186451	MsG0180000159.01.T01:CDS	45.0%
	GAGCTATCATGGTTCAATGC+TGG	+	Chr1:2186384-2186403	MsG0180000159.01.T01:CDS	45.0%
	GATGCATCATCATGCAATGG+AGG	+	Chr1:2183820-2183839	MsG0180000159.01.T01:CDS	45.0%
	GATTAGACGTGTTCTGGTGT+CGG	-	Chr1:2185369-2185388	None:intergenic	45.0%
	GATTCTGACCTCCCCATTAA+AGG	+	Chr1:2185101-2185120	MsG0180000159.01.T01:intron	45.0%
	GCATGTTTGGATTGACAGTG+AGG	-	Chr1:2184635-2184654	None:intergenic	45.0%
	GGGGAAGGACTTAGATTATG+TGG	+	Chr1:2183182-2183201	MsG0180000159.01.T01:intron	45.0%
	GTACTTGTCCTTTAATGGGG+AGG	-	Chr1:2185112-2185131	None:intergenic	45.0%
	GTCTTGCTAACAAGTGCCTT+AGG	-	Chr1:2181904-2181923	None:intergenic	45.0%
	TACCTCTTGTAGTCCCAGTA+TGG	-	Chr1:2182599-2182618	None:intergenic	45.0%
	TCAATGTACCACAAGAGAGG+AGG	-	Chr1:2182510-2182529	None:intergenic	45.0%
	TGGAAGATGGTGAGCTATCA+TGG	+	Chr1:2186373-2186392	MsG0180000159.01.T01:CDS	45.0%
!	AAACACGAGACATGGTGATG+GGG	-	Chr1:2182056-2182075	None:intergenic	45.0%
!	CATATCGGTGCCCCTATATT+TGG	+	Chr1:2185928-2185947	MsG0180000159.01.T01:intron	45.0%
!	CTAGAAGTGTGACTGTTGCA+TGG	+	Chr1:2184976-2184995	MsG0180000159.01.T01:intron	45.0%
!!	AAGGACAAGTACTGGTGTTG+GGG	+	Chr1:2185120-2185139	MsG0180000159.01.T01:intron	45.0%
!!	CCTTAAGGTATTGTGTGCCT+TGG	+	Chr1:2182544-2182563	MsG0180000159.01.T01:intron	45.0%
!!	GTTGGTGTTGGAATTGGACT+TGG	+	Chr1:2186414-2186433	MsG0180000159.01.T01:CDS	45.0%
!!!	AAAGTTTTAGAGCACGAGGC+AGG	-	Chr1:2181970-2181989	None:intergenic	45.0%
!!!	AAGTTTTAGAGCACGAGGCA+GGG	-	Chr1:2181969-2181988	None:intergenic	45.0%
!!!	GCCTCGTGCTCTAAAACTTT+TGG	+	Chr1:2181970-2181989	MsG0180000159.01.T01:intron	45.0%
!!!	CATATATATTTTTTTTATTT+AGG	+	Chr1:2185441-2185460	MsG0180000159.01.T01:intron	5.0%
!!!	TCTTATTTTTTTTTTTAAAA+AGG	+	Chr1:2182762-2182781	MsG0180000159.01.T01:intron	5.0%
	ACAGACATAGACACGGACAC+CGG	+	Chr1:2185248-2185267	MsG0180000159.01.T01:intron	50.0%
	ACCAGAACACGTCTAATCCG+AGG	+	Chr1:2185371-2185390	MsG0180000159.01.T01:intron	50.0%
	ACTAGGTAGTGCGTACGGTA+TGG	+	Chr1:2186589-2186608	MsG0180000159.01.T01:three_prime_UTR	50.0%
	ATACCGTACGCACTACCTAG+TGG	-	Chr1:2186590-2186609	None:intergenic	50.0%
	CGATCAGGAGCGAAATTGAG+AGG	-	Chr1:2185835-2185854	None:intergenic	50.0%
	CTACCACTAGGTAGTGCGTA+CGG	+	Chr1:2186584-2186603	MsG0180000159.01.T01:three_prime_UTR	50.0%
	GGACACTGCAGATCAATTGC+AGG	+	Chr1:2184375-2184394	MsG0180000159.01.T01:CDS	50.0%
	TCGGGAGTTACAAACCGATC+AGG	-	Chr1:2185850-2185869	None:intergenic	50.0%
	TTTGGTAGGAACGTGCCAAG+AGG	-	Chr1:2186470-2186489	None:intergenic	50.0%
!	TCCTCGGATTAGACGTGTTC+TGG	-	Chr1:2185375-2185394	None:intergenic	50.0%
!!	GCTGGAGTAAGAGTTGGTGT+TGG	+	Chr1:2186402-2186421	MsG0180000159.01.T01:CDS	50.0%
!!	GGGCACCGATATGTATTCGA+TGG	-	Chr1:2185921-2185940	None:intergenic	50.0%
	AGCATGCGTGGCTGTGGTAA+AGG	+	Chr1:2183253-2183272	MsG0180000159.01.T01:intron	55.0%
	AGTGACGTCCTCCTCTCTTG+TGG	+	Chr1:2182499-2182518	MsG0180000159.01.T01:intron	55.0%
	AGTGTGACTGTTGCATGGGC+AGG	+	Chr1:2184981-2185000	MsG0180000159.01.T01:intron	55.0%
	GTCAGTGTCTGTGTCGTGTC+CGG	-	Chr1:2185270-2185289	None:intergenic	55.0%
	TGGTATAGGGGTCAGCCTCT+TGG	+	Chr1:2186452-2186471	MsG0180000159.01.T01:CDS	55.0%
!!	GACAAGTACTGGTGTTGGGG+AGG	+	Chr1:2185123-2185142	MsG0180000159.01.T01:intron	55.0%
	AGAGCACGAGGCAGGGTGAT+GGG	-	Chr1:2181962-2181981	None:intergenic	60.0%
	TAGAGCACGAGGCAGGGTGA+TGG	-	Chr1:2181963-2181982	None:intergenic	60.0%
	CTAAGTCCTTCCCCCGGTCG+TGG	-	Chr1:2183176-2183195	None:intergenic	65.0%
	GAGCACGAGGCAGGGTGATG+GGG	-	Chr1:2181961-2181980	None:intergenic	65.0%
	TGTTGCCAGCCTGCCACGAC+CGG	+	Chr1:2183160-2183179	MsG0180000159.01.T01:intron	65.0%
	GTTGCCAGCCTGCCACGACC+GGG	+	Chr1:2183161-2183180	MsG0180000159.01.T01:intron	70.0%
	TTGCCAGCCTGCCACGACCG+GGG	+	Chr1:2183162-2183181	MsG0180000159.01.T01:intron	70.0%
	AGCCTGCCACGACCGGGGGA+AGG	+	Chr1:2183167-2183186	MsG0180000159.01.T01:intron	75.0%
	GTCCTTCCCCCGGTCGTGGC+AGG	-	Chr1:2183172-2183191	None:intergenic	75.0%
	TGCCAGCCTGCCACGACCGG+GGG	+	Chr1:2183163-2183182	MsG0180000159.01.T01:intron	75.0%
	TTCCCCCGGTCGTGGCAGGC+TGG	-	Chr1:2183168-2183187	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	2181748	2186826	2181748	ID=MsG0180000159.01;Name=MsG0180000159.01
Chr1	mRNA	2181748	2186826	2181748	ID=MsG0180000159.01.T01;Parent=MsG0180000159.01;Name=MsG0180000159.01.T01;_AED=0.33;_eAED=0.39;_QI=0\|0\|0.2\|0.8\|1\|1\|5\|302\|377
Chr1	exon	2186291	2186826	2186291	ID=MsG0180000159.01.T01:exon:6782;Parent=MsG0180000159.01.T01
Chr1	exon	2184562	2184679	2184562	ID=MsG0180000159.01.T01:exon:6781;Parent=MsG0180000159.01.T01
Chr1	exon	2184354	2184501	2184354	ID=MsG0180000159.01.T01:exon:6780;Parent=MsG0180000159.01.T01
Chr1	exon	2183684	2184252	2183684	ID=MsG0180000159.01.T01:exon:6779;Parent=MsG0180000159.01.T01
Chr1	exon	2181748	2181812	2181748	ID=MsG0180000159.01.T01:exon:6778;Parent=MsG0180000159.01.T01
Chr1	CDS	2181748	2181812	2181748	ID=MsG0180000159.01.T01:cds;Parent=MsG0180000159.01.T01
Chr1	CDS	2183684	2184252	2183684	ID=MsG0180000159.01.T01:cds;Parent=MsG0180000159.01.T01
Chr1	CDS	2184354	2184501	2184354	ID=MsG0180000159.01.T01:cds;Parent=MsG0180000159.01.T01
Chr1	CDS	2184562	2184679	2184562	ID=MsG0180000159.01.T01:cds;Parent=MsG0180000159.01.T01
Chr1	CDS	2186291	2186524	2186291	ID=MsG0180000159.01.T01:cds;Parent=MsG0180000159.01.T01
Chr1	three_prime_UTR	2186525	2186826	2186525	ID=MsG0180000159.01.T01:three_prime_utr;Parent=MsG0180000159.01.T01

Gene Sequence

>MsG0180000159.01.T01

ATGCTAACAAGTGCCCTAAGGGCACTTGTTAAGAAGACCAAAGAAGAAATTTTGTCTTGGAAATGGCAAAATTACATCAGCGGTCCTTTAACTGTTTCGTTGATTGTGAAACAGGTTTTGTTTCGATTTGAAAAAAATGATGTAGACTTTGATGGATTAACAATTTTAGTGATTTTGGATATGAAGATGGGAGGATCTTATGATGCATCATCATGCAATGGAGGAGAAGCAAGAAATAAAAGTCTTCAAATAATTGAATATTCACCTTATGATCCATCATGCATTAAATTATCATTTTCATTACCTTGGTTTGATGTAAGAGTTTTTTATGTAAGAGTTAGTGGAATTCAAGTGAATGAATCCACACCACAATTTCTATATCTTCATCATATACCTTTAAGTCCTGATACACTTTTAGAGGTAAATGGTGTTAGAAGTAACATGAATAGTGATGAAGATTCTTCAATTCTAAGAAGGGATAGAATTGATAAGAAATCTGAACAAGTCACTTTTGTGAATACAGATAGTATAAGAATAAATGGTAGCATGAAGTTTGAAGTTTGTGATAAAGATCAATGCATTCTCTCTTGTGTTCTTGAGATGAAAAGTGATGATAATGAGAAGAGATATTGGAGAAAACCTATAATCTTAACTAGGACACTGCAGATCAATTGCAGGAAGAAACATAATAGGAAAGGGTGCATGTTGGATGTGATTCCAGAATATGAAACATCTGAAATAAGAAAGATGTTTGTGATCATGATCATGGACTTGTTTCACAGGGACGTCGTGATTTTGTTGAAGCATCTAGCTTTTGCCAAAATAATGACGGCACACTGTGATTACGTCAGACCTCACTGTCAATCCAAACATGCACTAATTTGCGAAATGTTCCATTTGGTAGCTGAGTACAGAAGCTTCAAACCAGAAGAAGAAGAGCATTACAACAACATGTATTGCCAAAGGGAAGGATATATAGATATGGAAGATGGTGAGCTATCATGGTTCAATGCTGGAGTAAGAGTTGGTGTTGGAATTGGACTTGGCATCTTTGTAGGAGTTGGTATAGGGGTCAGCCTCTTGGCACGTTCCTACCAAAGAACTACTCGTAGTTTCAAGAGGAGGTTCATATAA

Protein sequence

>MsG0180000159.01.T01

MLTSALRALVKKTKEEILSWKWQNYISGPLTVSLIVKQVLFRFEKNDVDFDGLTILVILDMKMGGSYDASSCNGGEARNKSLQIIEYSPYDPSCIKLSFSLPWFDVRVFYVRVSGIQVNESTPQFLYLHHIPLSPDTLLEVNGVRSNMNSDEDSSILRRDRIDKKSEQVTFVNTDSIRINGSMKFEVCDKDQCILSCVLEMKSDDNEKRYWRKPIILTRTLQINCRKKHNRKGCMLDVIPEYETSEIRKMFVIMIMDLFHRDVVILLKHLAFAKIMTAHCDYVRPHCQSKHALICEMFHLVAEYRSFKPEEEEHYNNMYCQREGYIDMEDGELSWFNAGVRVGVGIGLGIFVGVGIGVSLLARSYQRTTRSFKRRFI*