AlfalfaGEDB | MsG0880043332.01

M. sativa cultivar ZhongmuNo.1 / MsG0880043332.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880043332.01.T01	MCI20405.1	69.565	161	43	3	29	189	1	155	8.08E-68	214

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880043332.01.T01	A0A392QAW2	69.565	161	43	3	29	189	1	155	3.86e-68	214

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0880043332.01	MsG0880045045.01	0.814286	1.664877e-51	1.112525e-48
MsG0580027332.01	MsG0880043332.01	0.810388	1.181467e-50	7.112018e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880043332.01.T01	MTR_8g028500	41.875	160	91	1	2	161	1816	1973	1.64e-29	114
MsG0880043332.01.T01	MTR_8g028500	32.804	189	113	6	5	186	1313	1494	4.51e-14	70.1
MsG0880043332.01.T01	MTR_8g028500	34.483	145	75	4	62	186	2143	2287	5.75e-12	64.3
MsG0880043332.01.T01	MTR_8g028520	41.772	158	90	1	4	161	1812	1967	7.92e-28	110
MsG0880043332.01.T01	MTR_8g028520	33.333	189	112	7	5	186	1309	1490	5.17e-14	70.1
MsG0880043332.01.T01	MTR_0006s0230	35.450	189	111	4	3	187	1308	1489	1.72e-25	103
MsG0880043332.01.T01	MTR_0006s0230	34.595	185	110	4	7	187	2012	2189	1.03e-23	98.2
MsG0880043332.01.T01	MTR_0006s0230	36.792	106	66	1	57	161	1095	1200	9.56e-14	69.3
MsG0880043332.01.T01	MTR_0006s0230	32.308	130	82	2	57	185	1799	1923	2.86e-11	62.0
MsG0880043332.01.T01	MTR_1g037130	35.135	185	109	4	7	187	1341	1518	2.68e-24	99.8
MsG0880043332.01.T01	MTR_1g037130	34.595	185	110	4	7	187	2041	2218	9.62e-24	98.2
MsG0880043332.01.T01	MTR_1g037130	36.036	111	69	2	52	161	1120	1229	5.53e-13	67.0
MsG0880043332.01.T01	MTR_1g037130	32.308	130	82	2	57	185	1828	1952	2.97e-11	62.0
MsG0880043332.01.T01	MTR_1g442750	34.595	185	110	4	7	187	1276	1453	3.41e-23	96.7
MsG0880043332.01.T01	MTR_1g442750	34.054	185	110	4	10	186	2187	2367	1.82e-22	94.4
MsG0880043332.01.T01	MTR_1g442750	28.662	157	84	3	7	163	1960	2088	3.31e-11	62.0
MsG0880043332.01.T01	MTR_8g059295	34.595	185	110	4	7	187	75	252	1.12e-22	92.0
MsG0880043332.01.T01	MTR_0068s0080	35.135	185	109	4	7	187	1348	1525	1.49e-22	94.7
MsG0880043332.01.T01	MTR_0068s0080	38.679	106	64	1	57	161	1131	1236	7.36e-15	72.4
MsG0880043332.01.T01	MTR_0068s0080	34.759	187	111	4	7	189	1339	1518	1.73e-22	94.7
MsG0880043332.01.T01	MTR_0068s0080	38.679	106	64	1	57	161	1122	1227	7.16e-15	72.4
MsG0880043332.01.T01	MTR_0069s0050	34.054	185	111	4	7	187	203	380	2.91e-22	92.8
MsG0880043332.01.T01	MTR_2g072110	33.511	188	118	4	2	186	1312	1495	3.48e-22	93.6
MsG0880043332.01.T01	MTR_2g072110	33.511	188	118	4	2	186	1351	1534	3.52e-22	93.6
MsG0880043332.01.T01	MTR_1g044020	34.225	187	112	4	7	189	1092	1271	7.82e-22	92.8
MsG0880043332.01.T01	MTR_1g044020	35.106	188	109	4	7	186	1611	1793	6.01e-18	81.6
MsG0880043332.01.T01	MTR_1g044020	29.787	188	115	5	7	186	2634	2812	1.77e-15	74.3
MsG0880043332.01.T01	MTR_1g044020	33.690	187	109	4	7	186	2117	2295	4.52e-15	73.2
MsG0880043332.01.T01	MTR_1g044020	31.613	155	78	3	7	161	1370	1496	8.80e-14	69.3
MsG0880043332.01.T01	MTR_1g044020	31.613	155	78	3	7	161	1895	2021	8.80e-14	69.3
MsG0880043332.01.T01	MTR_1g044020	36.190	105	66	1	58	161	874	978	1.02e-13	69.3
MsG0880043332.01.T01	MTR_0783s0010	33.690	187	113	4	7	189	143	322	9.26e-22	90.9
MsG0880043332.01.T01	MTR_0006s0290	38.122	181	106	3	7	186	219	394	9.73e-22	91.7
MsG0880043332.01.T01	MTR_1g041550	33.690	187	113	4	7	189	1329	1508	1.87e-21	91.7
MsG0880043332.01.T01	MTR_1g041550	33.511	188	108	5	7	186	2370	2548	3.18e-19	85.1
MsG0880043332.01.T01	MTR_1g041550	37.569	181	107	3	7	186	1850	2025	6.78e-19	84.3
MsG0880043332.01.T01	MTR_1g041550	35.849	106	67	1	57	161	1112	1217	2.67e-13	68.2
MsG0880043332.01.T01	MTR_1g036800	33.155	187	114	4	7	189	1340	1519	1.95e-21	91.7
MsG0880043332.01.T01	MTR_1g036800	37.736	106	65	1	57	161	1123	1228	2.65e-14	70.9
MsG0880043332.01.T01	MTR_8g059275	38.674	181	105	3	7	186	360	535	2.28e-21	91.3
MsG0880043332.01.T01	MTR_8g059275	36.216	185	112	3	3	186	1396	1575	6.51e-20	87.0
MsG0880043332.01.T01	MTR_8g059275	37.576	165	94	4	23	186	899	1055	1.94e-17	80.1
MsG0880043332.01.T01	MTR_8g059275	32.240	183	117	4	7	186	1913	2091	2.16e-17	79.7
MsG0880043332.01.T01	MTR_8g059275	32.484	157	74	6	7	161	637	763	7.12e-12	63.9
MsG0880043332.01.T01	MTR_8g059275	32.484	157	74	6	7	161	1157	1283	7.12e-12	63.9
MsG0880043332.01.T01	MTR_2g071890	31.915	188	113	4	6	186	1331	1510	2.29e-21	91.3
MsG0880043332.01.T01	MTR_8g059275	38.674	181	105	3	7	186	360	535	2.35e-21	91.3
MsG0880043332.01.T01	MTR_8g059275	36.216	185	112	3	3	186	1400	1579	6.51e-20	87.0
MsG0880043332.01.T01	MTR_8g059275	37.576	165	94	4	23	186	899	1055	1.98e-17	80.1
MsG0880043332.01.T01	MTR_8g059275	32.240	183	117	4	7	186	1917	2095	2.20e-17	79.7
MsG0880043332.01.T01	MTR_8g059275	32.484	157	74	6	7	161	637	763	7.33e-12	63.9
MsG0880043332.01.T01	MTR_8g059275	32.484	157	74	6	7	161	1157	1283	7.33e-12	63.9
MsG0880043332.01.T01	MTR_8g059275	38.674	181	105	3	7	186	360	535	2.58e-21	91.3
MsG0880043332.01.T01	MTR_8g059275	36.216	185	112	3	3	186	1788	1967	7.52e-20	87.0
MsG0880043332.01.T01	MTR_8g059275	37.576	165	94	4	23	186	1291	1447	2.02e-17	80.1
MsG0880043332.01.T01	MTR_8g059275	32.240	183	117	4	7	186	2305	2483	2.06e-17	80.1
MsG0880043332.01.T01	MTR_8g059275	32.484	157	74	6	7	161	637	763	7.47e-12	63.9
MsG0880043332.01.T01	MTR_8g059275	32.484	157	74	6	7	161	1549	1675	7.47e-12	63.9
MsG0880043332.01.T01	MTR_1g050402	34.595	185	110	4	7	187	1362	1539	2.98e-21	90.9
MsG0880043332.01.T01	MTR_1g050402	27.568	185	120	4	12	186	1861	2041	5.91e-11	61.2
MsG0880043332.01.T01	MTR_8g059275	38.674	181	105	3	7	186	360	535	3.06e-21	90.9
MsG0880043332.01.T01	MTR_8g059275	36.216	185	112	3	3	186	1268	1447	8.82e-20	86.7
MsG0880043332.01.T01	MTR_8g059275	32.240	183	117	4	7	186	1785	1963	2.48e-17	79.7
MsG0880043332.01.T01	MTR_8g059275	32.484	157	74	6	7	161	637	763	8.66e-12	63.5
MsG0880043332.01.T01	MTR_0012s0150	33.514	185	112	4	7	187	1091	1268	4.10e-21	90.5
MsG0880043332.01.T01	MTR_0012s0150	39.623	106	63	1	57	161	874	979	2.07e-14	71.2
MsG0880043332.01.T01	MTR_0006s0240	33.333	186	113	4	6	187	1308	1486	9.72e-21	89.7
MsG0880043332.01.T01	MTR_0006s0240	33.333	183	115	4	7	186	2273	2451	3.08e-19	85.1
MsG0880043332.01.T01	MTR_0006s0240	35.359	181	111	3	7	186	1753	1928	3.74e-16	76.3
MsG0880043332.01.T01	MTR_0006s0240	34.906	106	68	1	57	161	1092	1197	1.37e-11	63.2
MsG0880043332.01.T01	MTR_0006s0240	32.258	155	77	4	7	161	1587	1713	8.57e-11	60.8
MsG0880043332.01.T01	MTR_1g037150	32.979	188	115	4	6	189	1329	1509	9.79e-21	89.4
MsG0880043332.01.T01	MTR_1g037150	35.359	181	111	3	7	186	1774	1949	3.11e-16	76.6
MsG0880043332.01.T01	MTR_1g037150	34.906	106	68	1	57	161	1113	1218	1.41e-11	63.2
MsG0880043332.01.T01	MTR_1g037150	32.258	155	77	4	7	161	1608	1734	8.31e-11	60.8
MsG0880043332.01.T01	MTR_1g037010	32.973	185	113	4	7	187	1267	1444	1.46e-20	89.0
MsG0880043332.01.T01	MTR_1g037010	34.503	171	100	4	24	186	1797	1963	1.02e-18	83.6
MsG0880043332.01.T01	MTR_1g037010	35.849	106	67	1	57	161	1050	1155	2.33e-12	65.1
MsG0880043332.01.T01	MTR_0006s0080	32.973	185	113	4	7	187	1165	1342	1.64e-20	89.0
MsG0880043332.01.T01	MTR_0006s0080	34.239	184	112	5	7	186	1686	1864	1.07e-19	86.7
MsG0880043332.01.T01	MTR_0006s0080	36.842	114	70	2	49	161	941	1053	1.06e-13	69.3
MsG0880043332.01.T01	MTR_2g089975	33.514	185	112	4	7	187	1342	1519	1.65e-20	89.0
MsG0880043332.01.T01	MTR_2g089975	35.359	181	111	3	7	186	1863	2038	8.61e-19	84.0
MsG0880043332.01.T01	MTR_2g089975	35.359	181	110	3	7	186	2383	2557	1.17e-18	83.6
MsG0880043332.01.T01	MTR_2g089975	31.771	192	114	5	3	186	2898	3080	3.43e-16	76.3
MsG0880043332.01.T01	MTR_0069s0090	33.155	187	110	5	7	186	155	333	1.94e-20	87.4
MsG0880043332.01.T01	MTR_2g072030	31.771	192	116	4	2	186	1359	1542	2.49e-20	88.2
MsG0880043332.01.T01	MTR_0006s0160	32.973	185	113	4	7	187	405	582	2.52e-20	88.2
MsG0880043332.01.T01	MTR_0006s0160	33.962	106	69	1	57	161	198	303	3.99e-13	67.4
MsG0880043332.01.T01	MTR_0069s0040	33.514	185	112	4	7	187	1343	1520	2.96e-20	88.2
MsG0880043332.01.T01	MTR_0069s0040	35.849	106	67	1	57	161	1125	1230	1.17e-11	63.2
MsG0880043332.01.T01	MTR_6g464030	37.017	181	108	3	7	186	192	367	4.74e-20	87.4
MsG0880043332.01.T01	MTR_6g464030	31.053	190	121	5	1	186	709	892	5.42e-18	81.6
MsG0880043332.01.T01	MTR_1g051585	31.351	185	116	4	7	187	1844	2021	5.52e-20	87.4
MsG0880043332.01.T01	MTR_1g051585	32.432	185	98	7	7	187	1343	1504	3.60e-14	70.5
MsG0880043332.01.T01	MTR_1g051585	35.849	106	67	1	57	161	1125	1230	4.53e-11	61.6
MsG0880043332.01.T01	MTR_1g051585	31.210	157	76	5	7	161	1605	1731	7.08e-11	60.8
MsG0880043332.01.T01	MTR_1g051625	34.706	170	99	4	25	186	876	1041	5.65e-20	87.4
MsG0880043332.01.T01	MTR_1g051625	33.514	185	117	3	3	186	341	520	2.47e-17	79.7
MsG0880043332.01.T01	MTR_0460s0010	31.351	185	116	4	7	187	331	508	7.32e-20	87.0
MsG0880043332.01.T01	MTR_0460s0010	31.210	157	76	5	7	161	609	735	1.03e-11	63.2
MsG0880043332.01.T01	MTR_0460s0010	31.210	157	76	5	7	161	92	218	6.31e-11	60.8
MsG0880043332.01.T01	MTR_0006s0020	35.359	181	109	4	8	186	94	268	7.93e-20	85.1
MsG0880043332.01.T01	MTR_6g463150	32.620	187	115	4	7	189	1334	1513	8.06e-20	87.0
MsG0880043332.01.T01	MTR_6g463150	34.906	106	68	1	57	161	1121	1226	1.44e-11	62.8
MsG0880043332.01.T01	MTR_2g071980	32.086	187	121	3	2	186	1304	1486	1.77e-19	85.9
MsG0880043332.01.T01	MTR_2g071850	32.086	187	121	3	2	186	1324	1506	1.88e-19	85.9
MsG0880043332.01.T01	MTR_2g071870	32.086	187	121	3	2	186	1324	1506	1.90e-19	85.9
MsG0880043332.01.T01	MTR_2g071960	32.086	187	121	3	2	186	1194	1376	1.90e-19	85.9
MsG0880043332.01.T01	MTR_2g072080	34.737	190	115	6	2	186	1274	1459	3.40e-19	85.1
MsG0880043332.01.T01	MTR_2g071860	34.737	190	115	6	2	186	881	1066	3.45e-19	85.1
MsG0880043332.01.T01	MTR_1g036880	35.359	181	109	4	8	186	300	474	3.99e-19	84.7
MsG0880043332.01.T01	MTR_0006s0300	34.054	185	111	3	7	187	390	567	5.66e-19	84.3
MsG0880043332.01.T01	MTR_0006s0300	33.962	106	69	1	57	161	164	269	1.50e-12	65.5
MsG0880043332.01.T01	MTR_1g036750	32.432	185	114	4	7	187	1312	1489	7.39e-19	84.0
MsG0880043332.01.T01	MTR_1g036750	36.264	182	110	3	6	186	1832	2008	5.03e-18	81.6
MsG0880043332.01.T01	MTR_1g036750	32.749	171	103	4	24	186	2365	2531	7.97e-16	75.5
MsG0880043332.01.T01	MTR_1g036750	36.792	106	66	1	57	161	1095	1200	1.05e-13	69.3
MsG0880043332.01.T01	MTR_6g464050	34.409	186	113	4	7	189	1959	2138	1.13e-18	83.6
MsG0880043332.01.T01	MTR_1g036870	35.484	155	93	2	7	161	337	484	5.63e-18	81.3
MsG0880043332.01.T01	MTR_2g072820	31.915	188	121	4	2	186	1322	1505	5.71e-18	81.6
MsG0880043332.01.T01	MTR_0012s0160	36.478	159	95	3	29	186	1	154	2.24e-17	76.3
MsG0880043332.01.T01	MTR_0069s0080	35.165	182	112	3	6	186	352	528	3.19e-17	79.3
MsG0880043332.01.T01	MTR_0069s0080	33.750	160	93	4	7	161	869	1020	8.89e-17	78.2
MsG0880043332.01.T01	MTR_1g036820	36.464	181	109	3	7	186	283	458	4.80e-17	78.6
MsG0880043332.01.T01	MTR_1g036820	31.410	156	97	3	12	161	658	809	6.69e-15	72.4
MsG0880043332.01.T01	MTR_0006s0250	35.359	181	111	3	7	186	271	446	1.72e-16	77.0
MsG0880043332.01.T01	MTR_0006s0250	32.258	155	77	4	7	161	105	231	4.56e-11	61.2
MsG0880043332.01.T01	MTR_1g037250	32.558	172	102	5	24	186	1718	1884	2.53e-16	76.6
MsG0880043332.01.T01	MTR_1g037250	38.679	106	64	1	57	161	1047	1152	2.04e-14	71.2
MsG0880043332.01.T01	MTR_2g072020	29.787	188	116	5	6	186	1392	1570	3.99e-16	76.3
MsG0880043332.01.T01	MTR_2g072020	29.375	160	102	5	18	174	1068	1219	2.82e-11	62.0
MsG0880043332.01.T01	MTR_1g050395	31.217	189	121	5	2	186	554	737	7.50e-15	72.4
MsG0880043332.01.T01	MTR_1g044095	32.450	151	95	2	7	157	335	478	3.40e-14	70.5
MsG0880043332.01.T01	MTR_5g036460	31.282	195	119	5	4	189	1171	1359	6.29e-14	69.7
MsG0880043332.01.T01	MTR_7g088650	32.520	123	76	2	70	186	844	965	1.93e-13	68.6
MsG0880043332.01.T01	MTR_7g088290	29.534	193	118	6	7	189	1235	1419	4.08e-13	67.4
MsG0880043332.01.T01	MTR_7g088290	30.882	136	83	3	30	155	945	1079	5.59e-13	67.0
MsG0880043332.01.T01	MTR_8g059345	36.792	106	66	1	57	161	1123	1228	8.46e-13	66.6
MsG0880043332.01.T01	MTR_8g059345	34.848	132	79	2	7	138	1336	1460	5.11e-12	64.3
MsG0880043332.01.T01	MTR_4g025470	34.946	186	102	8	6	187	1298	1468	1.60e-12	65.9
MsG0880043332.01.T01	MTR_7g088640	31.788	151	92	4	36	177	1145	1293	2.34e-12	65.1
MsG0880043332.01.T01	MTR_7g088640	26.136	176	91	4	24	161	891	1065	7.95e-11	60.8
MsG0880043332.01.T01	MTR_0402s0020	28.649	185	118	4	12	186	118	298	5.38e-11	60.8
MsG0880043332.01.T01	MTR_7g018640	31.618	136	88	3	38	172	768	899	6.06e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 30 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TATGGAACTCCCCGAGTAAA+AGG	0.281702	8:+23135604	None:intergenic
CCATAGGGTTTGAGCATTCC+TGG	0.288969	8:-23135943	MsG0880043332.01.T01:CDS
ATCACACTCCTTAACCAATA+TGG	0.309349	8:+23135892	None:intergenic
TGGAGAAAGACACTCGTATA+TGG	0.311898	8:+23135846	None:intergenic
GAAAATAGTATCATCACATT+TGG	0.322481	8:-23135671	MsG0880043332.01.T01:CDS
CAAGGACGGGAAATTCAATA+TGG	0.360741	8:+23135586	None:intergenic
CTCCAATCTGACAGAGGTTA+AGG	0.363326	8:-23135828	MsG0880043332.01.T01:CDS
TGGACAACTAGAAACCATAT+TGG	0.419114	8:-23135906	MsG0880043332.01.T01:CDS
TACCTTAACCTCTGTCAGAT+TGG	0.424273	8:+23135826	None:intergenic
AAAATAGTATCATCACATTT+GGG	0.437355	8:-23135670	MsG0880043332.01.T01:CDS
ACTAGAAACCATATTGGTTA+AGG	0.438204	8:-23135900	MsG0880043332.01.T01:CDS
GAATTGAAGGTGACAAAAGA+TGG	0.461223	8:-23135494	MsG0880043332.01.T01:CDS
CAACACTTTGAATGCTCTAA+AGG	0.468977	8:-23135759	MsG0880043332.01.T01:CDS
GGTAGAGGATTGTTTCAGAC+TGG	0.476632	8:-23135807	MsG0880043332.01.T01:CDS
TTGCCTTCGCTCAAATCCAT+AGG	0.477347	8:-23135959	MsG0880043332.01.T01:CDS
CCAGGAATGCTCAAACCCTA+TGG	0.485607	8:+23135943	None:intergenic
AGTAACAATAGAGGAATTGA+AGG	0.515413	8:-23135507	MsG0880043332.01.T01:CDS
TAGAGCATTCAAAGTGTTGG+CGG	0.520895	8:+23135763	None:intergenic
CTTTAGAGCATTCAAAGTGT+TGG	0.533142	8:+23135760	None:intergenic
GGAGAAAGACACTCGTATAT+GGG	0.534531	8:+23135847	None:intergenic
TCTGACAGAGGTTAAGGTAG+AGG	0.534868	8:-23135822	MsG0880043332.01.T01:CDS
TGCCTTCGCTCAAATCCATA+GGG	0.539443	8:-23135958	MsG0880043332.01.T01:CDS
TGGTGAGGCAGTAACAATAG+AGG	0.546463	8:-23135516	MsG0880043332.01.T01:CDS
AACCCTATGGATTTGAGCGA+AGG	0.557469	8:+23135956	None:intergenic
TCCAACAAAATATTCCATCC+AGG	0.561984	8:+23135925	None:intergenic
AGGGTTTGAGCATTCCTGGA+TGG	0.582591	8:-23135939	MsG0880043332.01.T01:CDS
AAAGACACTCGTATATGGGA+TGG	0.596180	8:+23135851	None:intergenic
AAAGATGGAGTCTATACGAA+AGG	0.613176	8:-23135479	MsG0880043332.01.T01:CDS
GTCTTTCTCCAATCTGACAG+AGG	0.637017	8:-23135834	MsG0880043332.01.T01:CDS
GAGATGCATGTAACCAACTG+TGG	0.657137	8:-23135737	MsG0880043332.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAATAGTATCATCACATTT+GGG	-	Chr8:23135788-23135807	MsG0880043332.01.T01:CDS	20.0%
!!!	AAAAATTGAAACCTTTTACT+CGG	-	Chr8:23135843-23135862	MsG0880043332.01.T01:CDS	20.0%
!!!	AAACTTCTTTTACAACTTAA+AGG	-	Chr8:23135460-23135479	MsG0880043332.01.T01:CDS	20.0%
!	GAAAATAGTATCATCACATT+TGG	-	Chr8:23135787-23135806	MsG0880043332.01.T01:CDS	25.0%
!!	AAAATTGAAACCTTTTACTC+GGG	-	Chr8:23135844-23135863	MsG0880043332.01.T01:CDS	25.0%
!!	GAGTAAAAGGTTTCAATTTT+TGG	+	Chr8:23135844-23135863	None:intergenic	25.0%
!!!	AACATGAATGCTTTTTGTTT+TGG	-	Chr8:23135922-23135941	MsG0880043332.01.T01:CDS	25.0%
	AGTAACAATAGAGGAATTGA+AGG	-	Chr8:23135951-23135970	MsG0880043332.01.T01:CDS	30.0%
!	AAATTGAAACCTTTTACTCG+GGG	-	Chr8:23135845-23135864	MsG0880043332.01.T01:CDS	30.0%
!	ACTAGAAACCATATTGGTTA+AGG	-	Chr8:23135558-23135577	MsG0880043332.01.T01:CDS	30.0%
!!	ATTTTGTATTGATCCACAGT+TGG	+	Chr8:23135737-23135756	None:intergenic	30.0%
!!!	GGTTTCAATTTTTGGTAACA+AGG	+	Chr8:23135836-23135855	None:intergenic	30.0%
	AAAGATGGAGTCTATACGAA+AGG	-	Chr8:23135979-23135998	MsG0880043332.01.T01:CDS	35.0%
	ATCACACTCCTTAACCAATA+TGG	+	Chr8:23135569-23135588	None:intergenic	35.0%
	CAACACTTTGAATGCTCTAA+AGG	-	Chr8:23135699-23135718	MsG0880043332.01.T01:CDS	35.0%
	GAATTGAAGGTGACAAAAGA+TGG	-	Chr8:23135964-23135983	MsG0880043332.01.T01:CDS	35.0%
	TCCAACAAAATATTCCATCC+AGG	+	Chr8:23135536-23135555	None:intergenic	35.0%
	TGGACAACTAGAAACCATAT+TGG	-	Chr8:23135552-23135571	MsG0880043332.01.T01:CDS	35.0%
!	ACTTATCGACACTTTTCTCA+AGG	+	Chr8:23135893-23135912	None:intergenic	35.0%
!	TCCTGGATGGAATATTTTGT+TGG	-	Chr8:23135532-23135551	MsG0880043332.01.T01:CDS	35.0%
!!	CTTTAGAGCATTCAAAGTGT+TGG	+	Chr8:23135701-23135720	None:intergenic	35.0%
!!!	GAATGCTTTTTGTTTTGGTG+AGG	-	Chr8:23135927-23135946	MsG0880043332.01.T01:CDS	35.0%
	AAAGACACTCGTATATGGGA+TGG	+	Chr8:23135610-23135629	None:intergenic	40.0%
	CAAGGACGGGAAATTCAATA+TGG	+	Chr8:23135875-23135894	None:intergenic	40.0%
	GGAGAAAGACACTCGTATAT+GGG	+	Chr8:23135614-23135633	None:intergenic	40.0%
	TACCTTAACCTCTGTCAGAT+TGG	+	Chr8:23135635-23135654	None:intergenic	40.0%
	TGGAGAAAGACACTCGTATA+TGG	+	Chr8:23135615-23135634	None:intergenic	40.0%
!	ATCGACACTTTTCTCAAGGA+CGG	+	Chr8:23135889-23135908	None:intergenic	40.0%
!!	TAGAGCATTCAAAGTGTTGG+CGG	+	Chr8:23135698-23135717	None:intergenic	40.0%
	AACCCTATGGATTTGAGCGA+AGG	+	Chr8:23135505-23135524	None:intergenic	45.0%
	CTCCAATCTGACAGAGGTTA+AGG	-	Chr8:23135630-23135649	MsG0880043332.01.T01:CDS	45.0%
	GAGATGCATGTAACCAACTG+TGG	-	Chr8:23135721-23135740	MsG0880043332.01.T01:CDS	45.0%
	GGTAGAGGATTGTTTCAGAC+TGG	-	Chr8:23135651-23135670	MsG0880043332.01.T01:CDS	45.0%
	GTCTTTCTCCAATCTGACAG+AGG	-	Chr8:23135624-23135643	MsG0880043332.01.T01:CDS	45.0%
	TATGGAACTCCCCGAGTAAA+AGG	+	Chr8:23135857-23135876	None:intergenic	45.0%
	TCTGACAGAGGTTAAGGTAG+AGG	-	Chr8:23135636-23135655	MsG0880043332.01.T01:CDS	45.0%
	TGCCTTCGCTCAAATCCATA+GGG	-	Chr8:23135500-23135519	MsG0880043332.01.T01:CDS	45.0%
	TGGTGAGGCAGTAACAATAG+AGG	-	Chr8:23135942-23135961	MsG0880043332.01.T01:CDS	45.0%
	TTGCCTTCGCTCAAATCCAT+AGG	-	Chr8:23135499-23135518	MsG0880043332.01.T01:CDS	45.0%
!	TCGACACTTTTCTCAAGGAC+GGG	+	Chr8:23135888-23135907	None:intergenic	45.0%
	AGGGTTTGAGCATTCCTGGA+TGG	-	Chr8:23135519-23135538	MsG0880043332.01.T01:CDS	50.0%
	CCAGGAATGCTCAAACCCTA+TGG	+	Chr8:23135518-23135537	None:intergenic	50.0%
	CCATAGGGTTTGAGCATTCC+TGG	-	Chr8:23135515-23135534	MsG0880043332.01.T01:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	23135454	23136026	23135454	ID=MsG0880043332.01;Name=MsG0880043332.01
Chr8	mRNA	23135454	23136026	23135454	ID=MsG0880043332.01.T01;Parent=MsG0880043332.01;Name=MsG0880043332.01.T01;_AED=0.44;_eAED=0.44;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|190
Chr8	exon	23135454	23136026	23135454	ID=MsG0880043332.01.T01:exon:8437;Parent=MsG0880043332.01.T01
Chr8	CDS	23135454	23136026	23135454	ID=MsG0880043332.01.T01:cds;Parent=MsG0880043332.01.T01

Gene Sequence

>MsG0880043332.01.T01

ATGAGTAAACTTCTTTTACAACTTAAAGGATTAAAGCTTCAAAATTTGCCTTCGCTCAAATCCATAGGGTTTGAGCATTCCTGGATGGAATATTTTGTTGGACAACTAGAAACCATATTGGTTAAGGAGTGTGATTCTTTGACAAATCTGACTCCATCCCATATACGAGTGTCTTTCTCCAATCTGACAGAGGTTAAGGTAGAGGATTGTTTCAGACTGGAATACTTGTTTTCATCTTCAACCGCCAACACTTTGAATGCTCTAAAGGAGATGCATGTAACCAACTGTGGATCAATACAAAATATAATGACAAATGAAAATAAAAATGAAGATGAAAATAGTATCATCACATTTGGGAAGCTTCAGTTTTTGACTCTTACCTTGTTACCAAAAATTGAAACCTTTTACTCGGGGAGTTCCATATTGAATTTCCCGTCCTTGAGAAAAGTGTCGATAAGTAAATGCTATAACATGAATGCTTTTTGTTTTGGTGAGGCAGTAACAATAGAGGAATTGAAGGTGACAAAAGATGGAGTCTATACGAAAGGTGATTTAAATGATATGATGTTATAA

Protein sequence

>MsG0880043332.01.T01

MSKLLLQLKGLKLQNLPSLKSIGFEHSWMEYFVGQLETILVKECDSLTNLTPSHIRVSFSNLTEVKVEDCFRLEYLFSSSTANTLNALKEMHVTNCGSIQNIMTNENKNEDENSIITFGKLQFLTLTLLPKIETFYSGSSILNFPSLRKVSISKCYNMNAFCFGEAVTIEELKVTKDGVYTKGDLNDMML*