AlfalfaGEDB | MsG0880044144.01

M. sativa cultivar ZhongmuNo.1 / MsG0880044144.01

KEGG: -
GO: GO:0003676
PFAM: PF13456

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880044144.01.T01	XP_024630883.1	53.719	121	56	0	7	127	59	179	4.19E-40	144
MsG0880044144.01.T02	AES61794.1	53.333	90	42	0	1	90	92	181	4.07E-28	110

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880044144.01.T02	G7IF75	53.333	90	42	0	1	90	92	181	1.95e-28	110

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0780041116.01	MsG0880044144.01	PPI
MsG0380013578.01	MsG0880044144.01	PPI
MsG0780041116.01	MsG0880044144.01	PPI
MsG0780040274.01	MsG0880044144.01	PPI
MsG0280009322.01	MsG0880044144.01	PPI
MsG0880044144.01	MsG0280010449.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880044144.01.T01	MTR_1g088650	48.819	127	65	0	1	127	55	181	1.36e-42	139
MsG0880044144.01.T01	MTR_1g034430	46.552	116	62	0	3	118	66	181	2.29e-35	120
MsG0880044144.01.T01	MTR_6g016265	48.148	108	56	0	11	118	18	125	7.56e-33	112
MsG0880044144.01.T01	MTR_8g022750	46.774	124	49	1	4	127	177	283	3.43e-32	115
MsG0880044144.01.T01	MTR_3g116210	45.690	116	63	0	1	116	66	181	3.71e-30	107
MsG0880044144.01.T01	MTR_1g069475	50.980	102	50	0	10	111	142	243	1.54e-29	107
MsG0880044144.01.T01	MTR_4g008270	55.696	79	35	0	33	111	11	89	3.33e-29	102
MsG0880044144.01.T01	MTR_8g031800	45.714	105	56	1	10	114	9	112	4.89e-29	102
MsG0880044144.01.T01	MTR_6g453270	48.182	110	57	0	1	110	269	378	5.30e-29	108
MsG0880044144.01.T01	MTR_5g075610	53.933	89	39	1	38	126	1	87	6.68e-29	102
MsG0880044144.01.T01	MTR_6g089560	41.964	112	65	0	9	120	93	204	1.59e-28	104
MsG0880044144.01.T01	MTR_1g081930	43.860	114	64	0	5	118	11	124	1.89e-28	101
MsG0880044144.01.T01	MTR_7g063280	42.105	114	63	1	19	132	62	172	1.21e-27	100
MsG0880044144.01.T01	MTR_5g085210	43.119	109	62	0	8	116	95	203	1.23e-27	102
MsG0880044144.01.T01	MTR_1g074090	48.485	99	51	0	1	99	50	148	2.70e-27	99.4
MsG0880044144.01.T01	MTR_2g059470	52.439	82	39	0	34	115	2	83	1.00e-26	95.9
MsG0880044144.01.T01	MTR_5g049680	47.872	94	49	0	3	96	2	95	1.59e-26	95.9
MsG0880044144.01.T01	MTR_5g036320	50.588	85	42	0	11	95	58	142	7.44e-26	95.5
MsG0880044144.01.T01	MTR_5g083200	39.669	121	73	0	9	129	75	195	4.93e-25	94.7
MsG0880044144.01.T01	MTR_0002s1220	39.669	121	73	0	9	129	75	195	4.93e-25	94.7
MsG0880044144.01.T01	MTR_0015s0120	53.409	88	38	1	19	106	280	364	1.18e-24	97.1
MsG0880044144.01.T01	MTR_5g034450	55.844	77	34	0	19	95	36	112	4.15e-24	90.1
MsG0880044144.01.T01	MTR_3g111390	36.508	126	80	0	4	129	70	195	9.32e-24	91.7
MsG0880044144.01.T01	MTR_1g070820	36.508	126	80	0	4	129	70	195	9.32e-24	91.7
MsG0880044144.01.T01	MTR_8g099580	43.396	106	60	0	10	115	184	289	1.67e-23	93.2
MsG0880044144.01.T01	MTR_8g038340	45.977	87	47	0	3	89	160	246	1.76e-23	92.0
MsG0880044144.01.T01	MTR_2g027020	39.823	113	62	2	10	122	6	112	1.97e-23	90.5
MsG0880044144.01.T01	MTR_1g050488	56.410	78	34	0	20	97	86	163	2.29e-23	89.7
MsG0880044144.01.T01	MTR_8g036780	47.727	88	46	0	10	97	12	99	5.21e-23	87.4
MsG0880044144.01.T01	MTR_6g016355	47.436	78	41	0	16	93	100	177	8.56e-23	88.6
MsG0880044144.01.T01	MTR_7g013520	41.837	98	57	0	11	108	49	146	9.08e-23	88.6
MsG0880044144.01.T01	MTR_1g045340	38.983	118	72	0	12	129	64	181	2.65e-22	87.4
MsG0880044144.01.T01	MTR_8g079540	46.154	91	49	0	4	94	20	110	5.26e-22	85.1
MsG0880044144.01.T01	MTR_4g029360	39.516	124	75	0	9	132	104	227	6.29e-22	87.4
MsG0880044144.01.T01	MTR_4g094272	46.835	79	41	1	1	79	63	140	2.89e-21	83.6
MsG0880044144.01.T01	MTR_8g059135	40.741	108	63	1	22	129	19	125	1.96e-20	81.3
MsG0880044144.01.T01	MTR_1g017840	39.216	102	62	0	9	110	55	156	2.00e-20	82.0
MsG0880044144.01.T01	MTR_1g099430	42.268	97	54	1	2	96	95	191	3.21e-20	82.4
MsG0880044144.01.T01	MTR_1g018300	39.252	107	59	1	11	117	42	142	6.24e-20	82.8
MsG0880044144.01.T01	MTR_8g098925	34.746	118	63	1	9	126	56	159	8.25e-19	77.8
MsG0880044144.01.T01	MTR_1g074240	53.125	64	30	0	34	97	2	65	1.05e-18	75.1
MsG0880044144.01.T01	MTR_4g094370	48.611	72	37	0	3	74	6	77	5.76e-18	73.2
MsG0880044144.01.T01	MTR_7g078610	49.275	69	35	0	6	74	25	93	7.20e-18	73.6
MsG0880044144.01.T01	MTR_1g054905	48.529	68	35	0	11	78	80	147	8.86e-18	75.1
MsG0880044144.01.T01	MTR_5g037920	35.135	111	71	1	4	114	70	179	1.42e-17	76.3
MsG0880044144.01.T01	MTR_2g047100	34.483	116	61	1	16	131	2	102	1.46e-17	73.2
MsG0880044144.01.T01	MTR_4g046027	52.381	63	30	0	12	74	107	169	3.44e-17	73.9
MsG0880044144.01.T01	MTR_6g046670	43.750	80	45	0	6	85	97	176	3.87e-17	74.3
MsG0880044144.01.T01	MTR_8g031080	54.098	61	28	0	10	70	267	327	7.49e-17	75.9
MsG0880044144.01.T01	MTR_1g022215	46.269	67	36	0	20	86	2	68	3.92e-16	68.9
MsG0880044144.01.T01	MTR_6g034915	37.838	111	39	1	20	100	13	123	4.93e-16	70.9
MsG0880044144.01.T01	MTR_0093s0070	40.476	84	50	0	31	114	122	205	7.14e-16	71.2
MsG0880044144.01.T01	MTR_3g462490	47.619	63	33	0	10	72	79	141	1.08e-15	72.8
MsG0880044144.01.T01	MTR_5g068115	54.717	53	24	0	10	62	12	64	3.56e-15	65.9
MsG0880044144.01.T01	MTR_1g045560	50.000	60	30	0	38	97	1	60	3.85e-15	66.6
MsG0880044144.01.T01	MTR_6g033225	43.590	78	44	0	20	97	58	135	4.81e-15	67.4
MsG0880044144.01.T01	MTR_8g028785	37.069	116	45	2	10	121	260	351	6.86e-15	70.5
MsG0880044144.01.T01	MTR_1g062840	50.000	58	29	0	54	111	2	59	8.21e-15	65.5
MsG0880044144.01.T01	MTR_7g053400	52.632	57	27	0	37	93	180	236	1.17e-14	68.9
MsG0880044144.01.T01	MTR_1g109000	41.975	81	47	0	11	91	5	85	2.41e-13	61.6
MsG0880044144.01.T01	MTR_3g465840	41.429	70	41	0	58	127	1	70	1.18e-12	61.6
MsG0880044144.01.T01	MTR_8g045330	44.118	68	38	0	9	76	74	141	1.89e-12	61.2
MsG0880044144.01.T01	MTR_4g035890	45.000	60	33	0	7	66	89	148	3.13e-12	60.5
MsG0880044144.01.T01	MTR_1g087480	53.704	54	25	0	10	63	166	219	4.41e-12	61.2
MsG0880044144.01.T01	MTR_6g016135	47.458	59	31	0	37	95	384	442	6.53e-12	62.0
MsG0880044144.01.T01	MTR_7g006380	47.273	55	29	0	9	63	43	97	9.78e-12	59.7
MsG0880044144.01.T01	MTR_7g082130	29.412	119	61	1	14	132	26	121	1.02e-11	58.9
MsG0880044144.01.T01	MTR_8g088220	37.838	74	46	0	42	115	4	77	1.33e-11	57.0
MsG0880044144.01.T01	MTR_2g102247	55.319	47	21	0	5	51	102	148	1.44e-11	58.5
MsG0880044144.01.T01	MTR_2g017550	40.000	75	45	0	10	84	86	160	2.84e-11	58.2
MsG0880044144.01.T01	MTR_3g026270	43.636	55	31	0	38	92	1	55	3.04e-11	55.8
MsG0880044144.01.T01	MTR_7g072030	38.372	86	51	1	18	103	37	120	3.40e-11	57.0
MsG0880044144.01.T01	MTR_8g039080	39.796	98	42	3	5	96	81	167	8.62e-11	57.8
MsG0880044144.01.T01	MTR_4g073820	47.887	71	33	2	38	106	1	69	9.40e-11	54.7
MsG0880044144.01.T02	MTR_1g088650	53.333	90	42	0	1	90	92	181	4.93e-32	110
MsG0880044144.01.T02	MTR_5g075610	53.933	89	39	1	1	89	1	87	1.24e-29	102
MsG0880044144.01.T02	MTR_4g008270	55.405	74	33	0	1	74	16	89	5.14e-27	95.5
MsG0880044144.01.T02	MTR_2g059470	51.282	78	38	0	1	78	6	83	6.66e-25	89.7
MsG0880044144.01.T02	MTR_1g034430	48.148	81	42	0	1	81	101	181	2.86e-24	90.9
MsG0880044144.01.T02	MTR_6g016265	48.148	81	42	0	1	81	45	125	1.43e-23	87.8
MsG0880044144.01.T02	MTR_7g063280	41.489	94	55	0	1	94	78	171	6.80e-23	87.4
MsG0880044144.01.T02	MTR_8g022750	54.930	71	32	0	20	90	213	283	9.52e-22	86.7
MsG0880044144.01.T02	MTR_8g031800	46.753	77	40	1	1	77	37	112	4.72e-21	80.9
MsG0880044144.01.T02	MTR_3g116210	46.835	79	42	0	1	79	103	181	1.00e-19	79.3
MsG0880044144.01.T02	MTR_5g085210	44.304	79	44	0	1	79	125	203	1.18e-19	80.1
MsG0880044144.01.T02	MTR_6g453270	51.351	74	36	0	1	74	306	379	1.41e-19	82.0
MsG0880044144.01.T02	MTR_1g069475	50.685	73	36	0	2	74	171	243	4.78e-19	79.0
MsG0880044144.01.T02	MTR_8g059135	42.391	92	53	0	1	92	34	125	5.00e-19	76.3
MsG0880044144.01.T02	MTR_1g074240	53.333	60	28	0	1	60	6	65	6.12e-18	72.0
MsG0880044144.01.T02	MTR_2g027020	45.333	75	37	1	2	76	35	105	7.48e-18	74.7
MsG0880044144.01.T02	MTR_0015s0120	53.623	69	29	1	1	69	299	364	1.27e-17	76.3
MsG0880044144.01.T02	MTR_8g098925	40.449	89	53	0	1	89	71	159	4.31e-17	72.0
MsG0880044144.01.T02	MTR_5g083200	40.217	92	55	0	1	92	104	195	1.58e-16	71.2
MsG0880044144.01.T02	MTR_0002s1220	40.217	92	55	0	1	92	104	195	1.58e-16	71.2
MsG0880044144.01.T02	MTR_5g034450	55.172	58	26	0	1	58	55	112	3.51e-16	68.6
MsG0880044144.01.T02	MTR_1g045560	50.000	60	30	0	1	60	1	60	5.22e-16	67.4
MsG0880044144.01.T02	MTR_1g045340	39.130	92	56	0	1	92	90	181	5.38e-16	69.7
MsG0880044144.01.T02	MTR_3g111390	39.130	92	56	0	1	92	104	195	6.76e-16	69.7
MsG0880044144.01.T02	MTR_1g070820	39.130	92	56	0	1	92	104	195	6.76e-16	69.7
MsG0880044144.01.T02	MTR_1g062840	50.000	58	29	0	17	74	2	59	1.10e-15	66.6
MsG0880044144.01.T02	MTR_6g089560	39.759	83	50	0	1	83	122	204	1.87e-15	69.3
MsG0880044144.01.T02	MTR_1g081930	40.741	81	48	0	1	81	44	124	2.40e-15	66.6
MsG0880044144.01.T02	MTR_1g074090	50.000	62	31	0	1	62	87	148	2.56e-15	67.4
MsG0880044144.01.T02	MTR_1g050488	52.542	59	28	0	2	60	105	163	3.12e-15	67.4
MsG0880044144.01.T02	MTR_7g053400	51.786	56	27	0	1	56	181	236	1.84e-14	67.0
MsG0880044144.01.T02	MTR_6g016355	49.057	53	27	0	4	56	125	177	1.87e-14	65.5
MsG0880044144.01.T02	MTR_5g049680	47.458	59	31	0	1	59	37	95	3.71e-14	63.2
MsG0880044144.01.T02	MTR_7g013520	45.205	73	36	2	1	71	76	146	5.33e-14	64.3
MsG0880044144.01.T02	MTR_5g036320	48.276	58	30	0	1	58	85	142	5.63e-14	63.5
MsG0880044144.01.T02	MTR_8g099580	43.590	78	44	0	1	78	212	289	7.61e-14	65.5
MsG0880044144.01.T02	MTR_0093s0070	40.260	77	46	0	1	77	129	205	1.50e-13	63.5
MsG0880044144.01.T02	MTR_3g465840	41.429	70	41	0	21	90	1	70	2.75e-13	62.0
MsG0880044144.01.T02	MTR_1g017840	41.096	73	43	0	1	73	84	156	4.06e-13	61.6
MsG0880044144.01.T02	MTR_6g034915	46.032	63	34	0	1	63	61	123	8.61e-13	61.2
MsG0880044144.01.T02	MTR_8g088220	37.838	74	46	0	5	78	4	77	2.48e-12	57.8
MsG0880044144.01.T02	MTR_4g029360	38.710	93	57	0	3	95	135	227	3.27e-12	60.5
MsG0880044144.01.T02	MTR_3g026270	43.636	55	31	0	1	55	1	55	5.09e-12	56.6
MsG0880044144.01.T02	MTR_8g036780	46.667	60	32	0	1	60	40	99	6.00e-12	57.8
MsG0880044144.01.T02	MTR_7g072030	51.923	52	25	0	15	66	69	120	1.06e-11	57.4
MsG0880044144.01.T02	MTR_6g016135	46.552	58	31	0	1	58	385	442	1.25e-11	59.7
MsG0880044144.01.T02	MTR_4g073820	47.887	71	33	2	1	69	1	69	2.05e-11	55.5
MsG0880044144.01.T02	MTR_5g069700	41.538	65	38	0	17	81	3	67	2.46e-11	55.1
MsG0880044144.01.T02	MTR_8g028785	46.154	65	31	1	24	84	287	351	4.53e-11	58.2
MsG0880044144.01.T02	MTR_5g091440	46.429	56	30	0	1	56	1	56	6.38e-11	55.5
MsG0880044144.01.T02	MTR_5g037920	37.662	77	47	1	1	77	104	179	9.65e-11	56.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 31 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CAAAATCAATATTATTTAAT+TGG	0.130026	8:+36401743	None:intergenic
ATAGATGATAATAATGATTT+TGG	0.204327	8:-36401679	MsG0880044144.01.T01:CDS
CAACGTCAACATCACAAATA+AGG	0.265049	8:+36401812	None:intergenic
AGAAGGTTGTCGATCAATTT+CGG	0.334110	8:-36401708	MsG0880044144.01.T01:CDS
CAGGTGTTGGTTTCTCCCAT+TGG	0.371870	8:+36401953	None:intergenic
TATCATAACAGAGTAGGATT+TGG	0.413711	8:-36401892	MsG0880044144.01.T01:CDS
ATATTACACTTCCATCCAAC+AGG	0.453578	8:+36401934	None:intergenic
TCCTACTCTGTTATGATATG+TGG	0.454333	8:+36401897	None:intergenic
CAAATGTAGAGAAGGAGAAA+TGG	0.459032	8:-36401596	MsG0880044144.01.T01:CDS
AAATGGCATCAAAGGATTGA+TGG	0.473165	8:-36401579	None:intergenic
AATCAATATTATTTAATTGG+AGG	0.475594	8:+36401746	None:intergenic
TGGATCAAATCTTCACTGCT+TGG	0.475981	8:+36401973	None:intergenic
AACGTCAACATCACAAATAA+GGG	0.492051	8:+36401813	None:intergenic
CAAATCTTCACTGCTTGGCC+CGG	0.500065	8:+36401978	None:intergenic
AGAAGGAGAAATGGCATCAA+AGG	0.516913	8:-36401587	MsG0880044144.01.T01:CDS
GAAACTAGCAAATGTAGAGA+AGG	0.522826	8:-36401604	MsG0880044144.01.T01:CDS
ATTGGAGGACTGCAACCCAC+TGG	0.524791	8:+36401761	None:intergenic
CAGTGAAGATTTGATCCAAT+GGG	0.524832	8:-36401968	MsG0880044144.01.T01:CDS
CACTTCCATCCAACAGGTGT+TGG	0.528043	8:+36401940	None:intergenic
AGAAACCAACACCTGTTGGA+TGG	0.544125	8:-36401945	MsG0880044144.01.T01:CDS
GCAGTGAAGATTTGATCCAA+TGG	0.560473	8:-36401969	MsG0880044144.01.T01:CDS
TGGGAGAAACCAACACCTGT+TGG	0.567349	8:-36401949	MsG0880044144.01.T01:CDS
ATTGCACACAGCCCTCCAGT+GGG	0.581885	8:-36401776	MsG0880044144.01.T01:CDS
GGAGGACTGCAACCCACTGG+AGG	0.600041	8:+36401764	None:intergenic
GTTGTCGATCAATTTCGGAT+AGG	0.606280	8:-36401703	MsG0880044144.01.T01:CDS
TGTTGACGTTGAGGAAGCAA+TGG	0.613845	8:-36401800	MsG0880044144.01.T01:CDS
GTTGACGTTGAGGAAGCAAT+GGG	0.616662	8:-36401799	MsG0880044144.01.T01:CDS
GATTGCACACAGCCCTCCAG+TGG	0.631287	8:-36401777	MsG0880044144.01.T01:CDS
GAGGACTGCAACCCACTGGA+GGG	0.643250	8:+36401765	None:intergenic
TCCACATATCATAACAGAGT+AGG	0.652113	8:-36401898	MsG0880044144.01.T01:CDS
TATTTGTGATGTTGACGTTG+AGG	0.654679	8:-36401809	MsG0880044144.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CAAAATCAATATTATTTAAT+TGG	+	Chr8:36401821-36401840	None:intergenic	10.0%
!!!	AAATAATATTGATTTTGTAT+TGG	-	Chr8:36401824-36401843	MsG0880044144.01.T01:CDS	10.0%
!!	AATCAATATTATTTAATTGG+AGG	+	Chr8:36401818-36401837	None:intergenic	15.0%
!!!	ATAGATGATAATAATGATTT+TGG	-	Chr8:36401882-36401901	MsG0880044144.01.T01:CDS	15.0%
!!!	TTGTTTTTACAAAGACAAAT+TGG	-	Chr8:36401721-36401740	MsG0880044144.01.T01:CDS	20.0%
!!!	ATGTGTTTTAGAGATGAAAA+TGG	-	Chr8:36401693-36401712	MsG0880044144.01.T01:CDS	25.0%
!!!	TTTTGTATTGGATTCTAAGA+AGG	-	Chr8:36401836-36401855	MsG0880044144.01.T01:CDS	25.0%
	AACGTCAACATCACAAATAA+GGG	+	Chr8:36401751-36401770	None:intergenic	30.0%
	TATCATAACAGAGTAGGATT+TGG	-	Chr8:36401669-36401688	MsG0880044144.01.T01:CDS	30.0%
	AGAAGGTTGTCGATCAATTT+CGG	-	Chr8:36401853-36401872	MsG0880044144.01.T01:CDS	35.0%
	ATATTACACTTCCATCCAAC+AGG	+	Chr8:36401630-36401649	None:intergenic	35.0%
	CAAATGTAGAGAAGGAGAAA+TGG	-	Chr8:36401965-36401984	MsG0880044144.01.T01:CDS	35.0%
	CAACGTCAACATCACAAATA+AGG	+	Chr8:36401752-36401771	None:intergenic	35.0%
	CAGTGAAGATTTGATCCAAT+GGG	-	Chr8:36401593-36401612	MsG0880044144.01.T01:CDS	35.0%
	GAAACTAGCAAATGTAGAGA+AGG	-	Chr8:36401957-36401976	MsG0880044144.01.T01:CDS	35.0%
	TATTTGTGATGTTGACGTTG+AGG	-	Chr8:36401752-36401771	MsG0880044144.01.T01:CDS	35.0%
	TCCACATATCATAACAGAGT+AGG	-	Chr8:36401663-36401682	MsG0880044144.01.T01:CDS	35.0%
	TCCTACTCTGTTATGATATG+TGG	+	Chr8:36401667-36401686	None:intergenic	35.0%
	AGAAGGAGAAATGGCATCAA+AGG	-	Chr8:36401974-36401993	MsG0880044144.01.T01:CDS	40.0%
	GCAGTGAAGATTTGATCCAA+TGG	-	Chr8:36401592-36401611	MsG0880044144.01.T01:CDS	40.0%
	GTTGTCGATCAATTTCGGAT+AGG	-	Chr8:36401858-36401877	MsG0880044144.01.T01:CDS	40.0%
	TGGATCAAATCTTCACTGCT+TGG	+	Chr8:36401591-36401610	None:intergenic	40.0%
	AGAAACCAACACCTGTTGGA+TGG	-	Chr8:36401616-36401635	MsG0880044144.01.T01:CDS	45.0%
	GTTGACGTTGAGGAAGCAAT+GGG	-	Chr8:36401762-36401781	MsG0880044144.01.T01:CDS	45.0%
	TGTTGACGTTGAGGAAGCAA+TGG	-	Chr8:36401761-36401780	MsG0880044144.01.T01:CDS	45.0%
	CAAATCTTCACTGCTTGGCC+CGG	+	Chr8:36401586-36401605	None:intergenic	50.0%
	CACTTCCATCCAACAGGTGT+TGG	+	Chr8:36401624-36401643	None:intergenic	50.0%
	TGGGAGAAACCAACACCTGT+TGG	-	Chr8:36401612-36401631	MsG0880044144.01.T01:CDS	50.0%
!!	CAGGTGTTGGTTTCTCCCAT+TGG	+	Chr8:36401611-36401630	None:intergenic	50.0%
	ATTGCACACAGCCCTCCAGT+GGG	-	Chr8:36401785-36401804	MsG0880044144.01.T01:CDS	55.0%
	ATTGGAGGACTGCAACCCAC+TGG	+	Chr8:36401803-36401822	None:intergenic	55.0%
	GAGGACTGCAACCCACTGGA+GGG	+	Chr8:36401799-36401818	None:intergenic	60.0%
	GATTGCACACAGCCCTCCAG+TGG	-	Chr8:36401784-36401803	MsG0880044144.01.T01:CDS	60.0%
	GGAGGACTGCAACCCACTGG+AGG	+	Chr8:36401800-36401819	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	36401582	36402001	36401582	ID=MsG0880044144.01;Name=MsG0880044144.01
Chr8	mRNA	36401582	36402001	36401582	ID=MsG0880044144.01.T01;Parent=MsG0880044144.01;Name=MsG0880044144.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|139
Chr8	exon	36401582	36402001	36401582	ID=MsG0880044144.01.T01:exon:5239;Parent=MsG0880044144.01.T01
Chr8	CDS	36401582	36402001	36401582	ID=MsG0880044144.01.T01:cds;Parent=MsG0880044144.01.T01
Chr8	mRNA	36401582	36401890	36401582	ID=MsG0880044144.01.T02;Parent=MsG0880044144.01;Name=MsG0880044144.01.T02;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|102
Chr8	exon	36401582	36401890	36401582	ID=MsG0880044144.01.T02:exon:5240;Parent=MsG0880044144.01.T02
Chr8	CDS	36401582	36401890	36401582	ID=MsG0880044144.01.T02:cds;Parent=MsG0880044144.01.T02

Gene Sequence

>MsG0880044144.01.T01

GCCGGGCCAAGCAGTGAAGATTTGATCCAATGGGAGAAACCAACACCTGTTGGATGGAAGTGTAATATCAATGCTTCGTTCTCCACATATCATAACAGAGTAGGATTTGGTATGTGTTTTAGAGATGAAAATGGTGCTTTTGTTTTTACAAAGACAAATTGGTTCTCCCTTATTTGTGATGTTGACGTTGAGGAAGCAATGGGATTGCACACAGCCCTCCAGTGGGTTGCAGTCCTCCAATTAAATAATATTGATTTTGTATTGGATTCTAAGAAGGTTGTCGATCAATTTCGGATAGGCATAGATGATAATAATGATTTTGGTTGTATTTTACATGTATGTAAACAGTTGTTTTATAATAGTTTTCAAAACTCAGAAACTAGCAAATGTAGAGAAGGAGAAATGGCATCAAAGGATTGA

>MsG0880044144.01.T02

ATGTGTTTTAGAGATGAAAATGGTGCTTTTGTTTTTACAAAGACAAATTGGTTCTCCCTTATTTGTGATGTTGACGTTGAGGAAGCAATGGGATTGCACACAGCCCTCCAGTGGGTTGCAGTCCTCCAATTAAATAATATTGATTTTGTATTGGATTCTAAGAAGGTTGTCGATCAATTTCGGATAGGCATAGATGATAATAATGATTTTGGTTGTATTTTACATGTATGTAAACAGTTGTTTTATAATAGTTTTCAAAACTCAGAAACTAGCAAATGTAGAGAAGGAGAAATGGCATCAAAGGATTGA

Protein sequence

>MsG0880044144.01.T01

AGPSSEDLIQWEKPTPVGWKCNINASFSTYHNRVGFGMCFRDENGAFVFTKTNWFSLICDVDVEEAMGLHTALQWVAVLQLNNIDFVLDSKKVVDQFRIGIDDNNDFGCILHVCKQLFYNSFQNSETSKCREGEMASKD*

>MsG0880044144.01.T02

MCFRDENGAFVFTKTNWFSLICDVDVEEAMGLHTALQWVAVLQLNNIDFVLDSKKVVDQFRIGIDDNNDFGCILHVCKQLFYNSFQNSETSKCREGEMASKD*