AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045029.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045029.01.T01 MTR_8g063790 86.847 517 8 2 1 457 1 517 0.0 882
MsG0880045029.01.T01 MTR_8g063790 91.124 169 2 1 461 616 627 795 2.16e-96 315
MsG0880045029.01.T01 MTR_1g109620 57.361 523 157 3 1 457 1 523 0.0 584
MsG0880045029.01.T01 MTR_1g109620 60.241 166 53 1 461 613 633 798 9.56e-56 204
MsG0880045029.01.T01 MTR_8g105740 57.358 530 152 9 1 457 1 529 0.0 570
MsG0880045029.01.T01 MTR_8g105740 59.036 166 55 1 461 613 639 804 7.36e-55 201
MsG0880045029.01.T01 MTR_4g080160 53.409 528 175 5 1 457 1 528 0.0 561
MsG0880045029.01.T01 MTR_4g080160 59.524 168 55 1 461 615 638 805 3.78e-56 205
MsG0880045029.01.T01 MTR_1g032730 54.614 531 166 9 1 457 1 530 0.0 540
MsG0880045029.01.T01 MTR_1g032730 60.000 165 53 1 464 615 643 807 3.77e-55 202
MsG0880045029.01.T01 MTR_4g129270 53.715 471 153 6 52 458 55 524 1.36e-164 490
MsG0880045029.01.T01 MTR_4g129270 60.504 119 46 1 456 574 627 744 3.66e-36 145
MsG0880045029.01.T01 MTR_4g129270 53.715 471 153 6 52 458 55 524 8.15e-164 491
MsG0880045029.01.T01 MTR_4g129270 56.548 168 60 1 456 610 627 794 9.24e-51 189
MsG0880045029.01.T01 MTR_3g078210 51.701 441 152 3 78 458 4 443 2.43e-145 441
MsG0880045029.01.T01 MTR_3g078210 47.024 168 76 1 458 612 549 716 1.19e-35 144
MsG0880045029.01.T01 MTR_3g467030 51.152 434 180 3 56 458 2 434 3.47e-134 406
MsG0880045029.01.T01 MTR_0034s0170 34.557 463 225 10 52 455 83 526 3.83e-70 245
MsG0880045029.01.T01 MTR_0034s0170 32.948 173 89 9 458 607 628 796 8.59e-13 72.4
MsG0880045029.01.T01 MTR_2g073260 34.211 456 236 11 52 455 122 565 2.83e-68 240
MsG0880045029.01.T01 MTR_2g073260 32.749 171 93 7 458 608 667 835 3.41e-14 76.6
MsG0880045029.01.T01 MTR_8g087910 33.141 347 180 6 36 345 53 384 5.38e-56 195
MsG0880045029.01.T01 MTR_3g467040 41.398 186 74 1 273 458 1 151 1.05e-38 143
MsG0880045029.01.T01 MTR_3g076810 40.782 179 63 5 8 157 6 170 1.35e-28 112
MsG0880045029.01.T01 MTR_8g087930 31.527 203 103 9 456 625 232 431 3.30e-16 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045029.01.T01 AT1G23870 65.392 523 115 3 1 457 1 523 0.0 686
MsG0880045029.01.T01 AT1G23870 63.584 173 50 1 456 615 628 800 2.24e-65 231
MsG0880045029.01.T01 AT1G60140 63.289 523 126 3 1 457 1 523 0.0 666
MsG0880045029.01.T01 AT1G60140 63.006 173 51 1 458 617 630 802 2.59e-63 225
MsG0880045029.01.T01 AT1G60140 63.289 523 126 3 1 457 1 523 0.0 666
MsG0880045029.01.T01 AT1G60140 63.006 173 51 1 458 617 630 802 2.59e-63 225
MsG0880045029.01.T01 AT1G60140 63.289 523 126 3 1 457 1 523 0.0 666
MsG0880045029.01.T01 AT1G60140 63.006 173 51 1 458 617 630 802 2.59e-63 225
MsG0880045029.01.T01 AT1G60140 63.289 523 126 3 1 457 1 523 0.0 666
MsG0880045029.01.T01 AT1G60140 63.006 173 51 1 458 617 630 802 2.59e-63 225
MsG0880045029.01.T01 AT1G60140 63.289 523 126 3 1 457 1 523 0.0 666
MsG0880045029.01.T01 AT1G60140 63.006 173 51 1 458 617 630 802 2.59e-63 225
MsG0880045029.01.T01 AT1G70290 63.724 521 122 5 1 457 1 518 0.0 666
MsG0880045029.01.T01 AT1G70290 64.327 171 48 1 458 615 625 795 6.24e-66 233
MsG0880045029.01.T01 AT1G60140 63.289 523 126 3 1 457 1 523 0.0 664
MsG0880045029.01.T01 AT1G60140 63.971 136 47 2 458 593 630 763 2.02e-46 176
MsG0880045029.01.T01 AT4G17770 55.534 524 165 4 1 457 1 523 0.0 575
MsG0880045029.01.T01 AT4G17770 58.025 162 55 1 464 612 636 797 5.65e-54 199
MsG0880045029.01.T01 AT4G17770 55.534 524 165 4 1 457 1 523 0.0 575
MsG0880045029.01.T01 AT4G17770 58.025 162 55 1 464 612 636 797 5.65e-54 199
MsG0880045029.01.T01 AT1G70290 56.622 521 121 6 1 457 1 480 0.0 567
MsG0880045029.01.T01 AT1G70290 64.327 171 48 1 458 615 587 757 3.03e-66 233
MsG0880045029.01.T01 AT1G68020 52.951 576 181 9 1 493 1 569 0.0 562
MsG0880045029.01.T01 AT1G68020 56.886 167 59 1 461 614 644 810 2.74e-53 197
MsG0880045029.01.T01 AT1G68020 52.951 576 181 9 1 493 1 569 0.0 562
MsG0880045029.01.T01 AT1G68020 56.886 167 59 1 461 614 644 810 2.74e-53 197
MsG0880045029.01.T01 AT1G68020 53.333 570 176 9 1 487 1 563 0.0 561
MsG0880045029.01.T01 AT1G06410 54.335 519 173 7 1 457 1 517 0.0 543
MsG0880045029.01.T01 AT1G06410 56.571 175 63 1 456 617 622 796 6.17e-58 210
MsG0880045029.01.T01 AT1G06410 54.335 519 173 7 1 457 1 517 0.0 543
MsG0880045029.01.T01 AT1G06410 56.571 175 63 1 456 617 622 796 6.17e-58 210
MsG0880045029.01.T01 AT1G06410 54.335 519 173 7 1 457 1 517 0.0 543
MsG0880045029.01.T01 AT1G06410 56.571 175 63 1 456 617 622 796 6.17e-58 210
MsG0880045029.01.T01 AT2G18700 52.299 522 177 6 1 457 1 515 3.34e-177 526
MsG0880045029.01.T01 AT2G18700 60.606 165 51 2 461 611 625 789 2.50e-55 202
MsG0880045029.01.T01 AT1G16980 34.698 464 246 11 48 462 7 462 2.32e-78 263
MsG0880045029.01.T01 AT1G16980 34.698 464 246 11 48 462 7 462 3.20e-77 263
MsG0880045029.01.T01 AT1G16980 34.426 183 94 10 457 615 551 731 5.70e-11 66.2
MsG0880045029.01.T01 AT1G78580 34.423 459 231 11 52 455 91 534 6.31e-69 242
MsG0880045029.01.T01 AT1G78580 32.749 171 90 8 458 607 639 805 9.64e-15 78.6
MsG0880045029.01.T01 AT1G78580 34.423 459 231 11 52 455 91 534 6.31e-69 242
MsG0880045029.01.T01 AT1G78580 32.749 171 90 8 458 607 639 805 9.64e-15 78.6
MsG0880045029.01.T01 AT1G78580 34.423 459 231 11 52 455 91 534 6.31e-69 242
MsG0880045029.01.T01 AT1G78580 32.749 171 90 8 458 607 639 805 9.64e-15 78.6
MsG0880045029.01.T01 AT1G78580 34.423 459 231 11 52 455 91 534 6.31e-69 242
MsG0880045029.01.T01 AT1G78580 32.749 171 90 8 458 607 639 805 9.64e-15 78.6
MsG0880045029.01.T01 AT4G27550 31.798 456 250 9 51 456 2 446 2.62e-64 227
MsG0880045029.01.T01 AT4G27550 33.333 195 103 9 437 607 523 714 7.20e-16 82.0
MsG0880045029.01.T01 AT4G27550 31.868 455 249 9 52 456 3 446 3.10e-64 227
MsG0880045029.01.T01 AT4G27550 33.333 195 103 9 437 607 532 723 7.13e-16 82.0

Find 158 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGTGGATCAGATTCTTTC+TGG 0.076554 8:-52928469 MsG0880045029.01.T01:intron
ACAACTTCACCCTGCAAATT+TGG 0.106547 8:+52930257 None:intergenic
AAAAGGATCAATGAAATTTA+TGG 0.184333 8:-52930155 MsG0880045029.01.T01:CDS
CAAGATGCAGACCCTGATTT+TGG 0.207528 8:-52929127 MsG0880045029.01.T01:CDS
CCAAGGGTTATGACTGTTCC+TGG 0.261011 8:-52931246 MsG0880045029.01.T01:CDS
ATAAATTTCATTGATCCTTT+TGG 0.261126 8:+52930157 None:intergenic
ATAAATCCTGCAAGGGGTTC+AGG 0.270561 8:-52930221 MsG0880045029.01.T01:CDS
TTGAGAATTTCATCCCTTAC+TGG 0.274615 8:+52930620 None:intergenic
CTCTAAGCTAAAAGAGATTC+AGG 0.278734 8:-52930384 MsG0880045029.01.T01:CDS
CTTCTCTGAGTGGGGCCATC+AGG 0.282889 8:-52929891 MsG0880045029.01.T01:CDS
GATGCCATGCAAACCGATTC+AGG 0.283524 8:+52928443 None:intergenic
AAAGATAAGAAAGTTATTCT+TGG 0.285155 8:-52930353 MsG0880045029.01.T01:CDS
GAATCAGATGTTAGTTCTTC+TGG 0.292836 8:-52931201 MsG0880045029.01.T01:CDS
CAAGTGGTCCAGCAATTCTT+TGG 0.301605 8:+52929093 None:intergenic
ATAACCCTTGGAAGACTTCT+TGG 0.323153 8:+52931258 None:intergenic
TGAGAAGGTTCTCTTGAATA+TGG 0.324266 8:-52928876 MsG0880045029.01.T01:CDS
TCCCATCATCTGAAATTTAC+CGG 0.324934 8:-52930649 MsG0880045029.01.T01:CDS
CAGCAATTCTTTGGCTTGGC+AGG 0.325831 8:+52929102 None:intergenic
CAACTTCACCCTGCAAATTT+GGG 0.326749 8:+52930258 None:intergenic
CACGAAATCTGGTGGATTAC+CGG 0.327222 8:+52928847 None:intergenic
TCCTTCCCTGAACCCCTTGC+AGG 0.330095 8:+52930215 None:intergenic
GCTTGGCAGGAGCCAAAATC+AGG 0.332771 8:+52929115 None:intergenic
GTGTGGATCAGATTCTTTCT+GGG 0.339981 8:-52928468 MsG0880045029.01.T01:intron
CTTGTTGTGTCTGAGTTCAT+TGG 0.350593 8:-52929922 MsG0880045029.01.T01:CDS
GAGATATTGATACTGCTAAA+TGG 0.353153 8:-52931125 MsG0880045029.01.T01:CDS
CCAATGCACATCACGAAATC+TGG 0.354845 8:+52928836 None:intergenic
CGATTTCATCGAGTTAAACT+TGG 0.356832 8:-52930692 MsG0880045029.01.T01:CDS
GGGTTCAGGGAAGGATGTTC+AGG 0.357166 8:-52930207 MsG0880045029.01.T01:CDS
TTGTTGAATTCGGATTTAAT+TGG 0.359446 8:-52930593 MsG0880045029.01.T01:CDS
ATTTGTTTGCGGATCTTGAT+TGG 0.360978 8:-52929243 MsG0880045029.01.T01:CDS
GGGATTATTTCTGACCTTGA+TGG 0.367224 8:-52931225 MsG0880045029.01.T01:CDS
CTGCCAAGCCAAAGAATTGC+TGG 0.368870 8:-52929101 MsG0880045029.01.T01:CDS
TCTCAAAGGATTGTTGAATT+CGG 0.369451 8:-52930603 MsG0880045029.01.T01:CDS
CCTGCAGAAAAGTTCTATCT+TGG 0.377725 8:-52930926 MsG0880045029.01.T01:CDS
TTCTTTCTGGGCTCCTGAAT+CGG 0.378445 8:-52928456 MsG0880045029.01.T01:CDS
TTTAGCTTAGAGGATGTAGA+AGG 0.386302 8:+52930395 None:intergenic
GGGCCATCAGGGTCAATCCC+TGG 0.389275 8:-52929879 MsG0880045029.01.T01:CDS
TAACCCTTGGAAGACTTCTT+GGG 0.392932 8:+52931259 None:intergenic
TATGAATTTAGCCCTCAGTA+TGG 0.393080 8:-52929833 MsG0880045029.01.T01:CDS
ATTCTATTACAATTAAAAGA+TGG 0.393081 8:-52931078 MsG0880045029.01.T01:CDS
GCAGCAGAACCCAAATTTGC+AGG 0.398626 8:-52930267 MsG0880045029.01.T01:CDS
GAATCTAAGCGCGGACATAT+AGG 0.407020 8:-52930503 MsG0880045029.01.T01:CDS
CTTCTCAGCTACCAAACCTT+TGG 0.411552 8:+52928892 None:intergenic
GTTGTTCACCTTCTCTGAGT+GGG 0.416077 8:-52929900 MsG0880045029.01.T01:CDS
TTCTATTACAATTAAAAGAT+GGG 0.419809 8:-52931077 MsG0880045029.01.T01:CDS
GTCCGGTAAATTTCAGATGA+TGG 0.420016 8:+52930647 None:intergenic
TGAAATTGCTCAGAGATTAC+TGG 0.424931 8:-52930986 MsG0880045029.01.T01:CDS
CAAGAGATTCTCTGAATGAA+TGG 0.436703 8:-52929437 MsG0880045029.01.T01:CDS
ATAAGCACTCTTCTCGAAAC+GGG 0.444038 8:+52930089 None:intergenic
CTGCTAAATGGTGTTTCAGT+TGG 0.444648 8:-52931113 MsG0880045029.01.T01:CDS
TTTACCGGACTTTGCCAGTA+AGG 0.446014 8:-52930634 MsG0880045029.01.T01:CDS
CAGACAGGGAACTGCAAAGC+TGG 0.446931 8:-52929989 MsG0880045029.01.T01:intron
ATGTTAGTTCTTCTGGATGT+CGG 0.447873 8:-52931194 MsG0880045029.01.T01:CDS
CTGCAGGTCATGGGGTAGAA+AGG 0.448467 8:+52930942 None:intergenic
GAATCGGTTTGCATGGCATC+AGG 0.449527 8:-52928440 MsG0880045029.01.T01:CDS
GGTGGAATAGCGACTCTGAA+TGG 0.451271 8:-52929276 MsG0880045029.01.T01:CDS
TGCGGATCTTGATTGGAAAC+AGG 0.453319 8:-52929236 MsG0880045029.01.T01:CDS
CATATAGGACTTGATTACTT+TGG 0.456053 8:-52930488 MsG0880045029.01.T01:CDS
ACAGGGAGTAACCAAAGGTT+TGG 0.457006 8:-52928903 MsG0880045029.01.T01:intron
GTTTACATCATGCAAACTGC+TGG 0.460290 8:-52929415 MsG0880045029.01.T01:CDS
CCAGATTTCGTGATGTGCAT+TGG 0.463267 8:-52928836 MsG0880045029.01.T01:CDS
GGCAAACATGTTGCCGCTGC+AGG 0.463803 8:-52931154 MsG0880045029.01.T01:CDS
TGAAGTCAAGGAAAGTGCTT+TGG 0.467204 8:-52929161 MsG0880045029.01.T01:CDS
TAAATCCTGCAAGGGGTTCA+GGG 0.467451 8:-52930220 MsG0880045029.01.T01:CDS
TGTTAGTTCTTCTGGATGTC+GGG 0.472937 8:-52931193 MsG0880045029.01.T01:CDS
CAAAGGTTTGGTAGCTGAGA+AGG 0.472991 8:-52928891 MsG0880045029.01.T01:CDS
CTGCAGTAGAATGCTAGGTC+TGG 0.477809 8:-52930531 MsG0880045029.01.T01:CDS
AAGCTTATTTAATTGCCAAA+AGG 0.478363 8:-52930172 MsG0880045029.01.T01:CDS
TTCTCTGAGTGGGGCCATCA+GGG 0.481545 8:-52929890 MsG0880045029.01.T01:CDS
ATGAATTTAGCCCTCAGTAT+GGG 0.482655 8:-52929832 MsG0880045029.01.T01:CDS
AGCAAAATCTCGGGAGCTGA+TGG 0.488013 8:+52928750 None:intergenic
CAAGGGTTATGACTGTTCCT+GGG 0.488044 8:-52931245 MsG0880045029.01.T01:CDS
CAAAGAATTGCTGGACCACT+TGG 0.490557 8:-52929092 MsG0880045029.01.T01:CDS
TCTTGCTGCAGTAGAATGCT+AGG 0.494534 8:-52930536 MsG0880045029.01.T01:CDS
CTACCGTGCAAGCAAAATCT+CGG 0.496128 8:+52928740 None:intergenic
AGCAACTGCATCTATATCCC+AGG 0.496254 8:+52929861 None:intergenic
TCCGGTAAATTTCAGATGAT+GGG 0.500703 8:+52930648 None:intergenic
TCAAATTATAAATCCTGCAA+GGG 0.500735 8:-52930228 MsG0880045029.01.T01:CDS
TCTGTATACGACTGCATGAC+AGG 0.500792 8:+52929205 None:intergenic
GGTCCAGCAATTCTTTGGCT+TGG 0.501011 8:+52929098 None:intergenic
GGCTCCTGAATCGGTTTGCA+TGG 0.501103 8:-52928447 MsG0880045029.01.T01:CDS
ACCCAAACAAAATCATCATC+GGG 0.501271 8:+52930758 None:intergenic
TGCTAAATGGTGTTTCAGTT+GGG 0.502656 8:-52931112 MsG0880045029.01.T01:CDS
CATCCCTTACTGGCAAAGTC+CGG 0.504874 8:+52930630 None:intergenic
CTCTTGAATATGGTTAATGC+CGG 0.507275 8:-52928866 MsG0880045029.01.T01:CDS
AATAAGCACTCTTCTCGAAA+CGG 0.508309 8:+52930088 None:intergenic
AACCCAAACAAAATCATCAT+CGG 0.516929 8:+52930757 None:intergenic
GTGGAATAGCGACTCTGAAT+GGG 0.520863 8:-52929275 MsG0880045029.01.T01:CDS
ATGGTGTTTCAGTTGGGATG+AGG 0.523696 8:-52931106 MsG0880045029.01.T01:CDS
GGCCATCAGGGTCAATCCCT+GGG 0.525071 8:-52929878 MsG0880045029.01.T01:CDS
GAAGGTTGACGTGTGGTTCG+TGG 0.526824 8:-52928418 MsG0880045029.01.T01:CDS
GTTCTTCTGGATGTCGGGAG+CGG 0.526826 8:-52931188 MsG0880045029.01.T01:CDS
GGAAACAAGTCATTTGTTTG+CGG 0.528499 8:-52929254 MsG0880045029.01.T01:CDS
TTCAAATTATAAATCCTGCA+AGG 0.529329 8:-52930229 MsG0880045029.01.T01:CDS
TGGATCTAATATTGAAGTCA+AGG 0.535654 8:-52929173 MsG0880045029.01.T01:CDS
TGAGATAGATGCTAGTGAGC+AGG 0.537498 8:-52931010 MsG0880045029.01.T01:CDS
CCAGGAACAGTCATAACCCT+TGG 0.540553 8:+52931246 None:intergenic
CAATCTGAAATTTCTAGCTG+TGG 0.541729 8:-52930300 MsG0880045029.01.T01:CDS
TTGTTCACCTTCTCTGAGTG+GGG 0.546280 8:-52929899 MsG0880045029.01.T01:CDS
TACCGTGCAAGCAAAATCTC+GGG 0.546890 8:+52928741 None:intergenic
TGTGTTCATTGTTAGTGGAA+GGG 0.547481 8:-52929460 MsG0880045029.01.T01:intron
CTGGGACTTGCAGCTGAACA+TGG 0.550416 8:-52929396 MsG0880045029.01.T01:CDS
AATCGTTTCCTCAAGAAAGT+AGG 0.550967 8:+52930710 None:intergenic
TAAGAAAGTTATTCTTGGTG+TGG 0.551636 8:-52930348 MsG0880045029.01.T01:CDS
TGAATTTAGCCCTCAGTATG+GGG 0.553092 8:-52929831 MsG0880045029.01.T01:CDS
GGAAGACTTCTTGGGGTGTG+AGG 0.553746 8:+52931267 None:intergenic
TGCAAAGCTGGATGAAGCTG+TGG 0.555064 8:-52929977 MsG0880045029.01.T01:CDS
AGCATCTATCTCAACCTTGA+GGG 0.558399 8:+52931020 None:intergenic
TTACCGGACTTTGCCAGTAA+GGG 0.558832 8:-52930633 MsG0880045029.01.T01:CDS
TGATACTGAGGTAATCTATG+TGG 0.564061 8:-52931046 MsG0880045029.01.T01:CDS
GAGCGGTCAATGATAATGAC+TGG 0.567271 8:+52930116 None:intergenic
TCAAGGTCAGAAATAATCCC+AGG 0.567364 8:+52931228 None:intergenic
TCCTGCAAGGGGTTCAGGGA+AGG 0.568476 8:-52930216 MsG0880045029.01.T01:CDS
GGTTGTTCACCTTCTCTGAG+TGG 0.569153 8:-52929901 MsG0880045029.01.T01:CDS
GATTTCATCGAGTTAAACTT+GGG 0.570858 8:-52930691 MsG0880045029.01.T01:CDS
CAGGATTTATAATTTGAACA+AGG 0.572858 8:+52930234 None:intergenic
AATATTTGCAGACAAAGTCA+TGG 0.573166 8:-52930792 MsG0880045029.01.T01:CDS
GATACTGAGGTAATCTATGT+GGG 0.575365 8:-52931045 MsG0880045029.01.T01:CDS
TATTCTTGGTGTGGACGACA+TGG 0.577773 8:-52930339 MsG0880045029.01.T01:CDS
AATCTATGTGGGTTCCCTCA+AGG 0.580394 8:-52931034 MsG0880045029.01.T01:CDS
TCTTTACAGGGAGTAACCAA+AGG 0.585367 8:-52928908 MsG0880045029.01.T01:intron
CGGTAGGAATTCACATGGGT+AGG 0.588120 8:-52930439 MsG0880045029.01.T01:CDS
ATCCCAGGGATTGACCCTGA+TGG 0.588505 8:+52929876 None:intergenic
AACCCTTGGAAGACTTCTTG+GGG 0.592251 8:+52931260 None:intergenic
TCGTATACAGAAGCAACTGA+TGG 0.593251 8:-52929193 MsG0880045029.01.T01:CDS
ACACCCCAAGAAGTCTTCCA+AGG 0.595682 8:-52931263 MsG0880045029.01.T01:CDS
CTACCCATGTGAATTCCTAC+CGG 0.597503 8:+52930440 None:intergenic
CGGTTTGCATGGCATCAGGA+AGG 0.601497 8:-52928436 MsG0880045029.01.T01:CDS
TAGCATCTATCTCAACCTTG+AGG 0.607564 8:+52931019 None:intergenic
TAAATTTCAGATGATGGGAA+AGG 0.607697 8:+52930653 None:intergenic
GTAAGGGATGAAATTCTCAA+AGG 0.608917 8:-52930617 MsG0880045029.01.T01:CDS
CAAATTATAAATCCTGCAAG+GGG 0.610053 8:-52930227 MsG0880045029.01.T01:CDS
TTTACATCATGCAAACTGCT+GGG 0.611466 8:-52929414 MsG0880045029.01.T01:CDS
ATGCACATCACGAAATCTGG+TGG 0.613992 8:+52928839 None:intergenic
CTGATGGCCCCACTCAGAGA+AGG 0.614227 8:+52929892 None:intergenic
TGATGTGCATTGGAGATGAT+AGG 0.616649 8:-52928826 MsG0880045029.01.T01:CDS
CAGCAGAACCCAAATTTGCA+GGG 0.618312 8:-52930266 MsG0880045029.01.T01:CDS
TAACATCTGATTCACCATCA+AGG 0.622114 8:+52931211 None:intergenic
CAGGTCATGGGGTAGAAAGG+TGG 0.624978 8:+52930945 None:intergenic
ACTGGATGACTTTAATTGCG+TGG 0.625192 8:-52930968 MsG0880045029.01.T01:CDS
CTTGGCAGGAGCCAAAATCA+GGG 0.629827 8:+52929116 None:intergenic
GAATTTAGCCCTCAGTATGG+GGG 0.635859 8:-52929830 MsG0880045029.01.T01:CDS
AAGTAGGCAAAATCATCAAG+TGG 0.641749 8:+52930726 None:intergenic
CACCCCAAGAAGTCTTCCAA+GGG 0.641869 8:-52931262 MsG0880045029.01.T01:CDS
GCAACTGCATCTATATCCCA+GGG 0.642398 8:+52929862 None:intergenic
TCAAGGAAAGTGCTTTGGTG+TGG 0.650646 8:-52929156 MsG0880045029.01.T01:CDS
TAGCAAGAACACTTTCCAAG+TGG 0.651389 8:+52929077 None:intergenic
TTTGCCGGTAGGAATTCACA+TGG 0.662631 8:-52930444 MsG0880045029.01.T01:CDS
GCAAAGCTGGATGAAGCTGT+GGG 0.684464 8:-52929976 MsG0880045029.01.T01:CDS
ACAACAAGCATGCTTGTACG+AGG 0.685754 8:+52929937 None:intergenic
TCGGGAGCGGAAAATCATTG+TGG 0.689766 8:-52931175 MsG0880045029.01.T01:CDS
ATGATGGGAAAGGACTGTGA+AGG 0.694384 8:+52930663 None:intergenic
GGATCTTGATTGGAAACAGG+TGG 0.695331 8:-52929233 MsG0880045029.01.T01:CDS
GCATCAGGAAGGTTGACGTG+TGG 0.697540 8:-52928425 MsG0880045029.01.T01:CDS
CTGGACTATGAATCTAAGCG+CGG 0.708845 8:-52930512 MsG0880045029.01.T01:CDS
TTCTCGAAACGGGAACAGAG+CGG 0.723351 8:+52930099 None:intergenic
TCGGGAGCTGATGGTAACGA+CGG 0.727807 8:+52928759 None:intergenic
TTGCCGGTAGGAATTCACAT+GGG 0.730503 8:-52930443 MsG0880045029.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTCTATTTTCTTT+TGG + Chr8:52930413-52930432 None:intergenic 10.0%
!! ATTCTATTACAATTAAAAGA+TGG - Chr8:52928658-52928677 MsG0880045029.01.T01:intron 15.0%
!! TTCTATTACAATTAAAAGAT+GGG - Chr8:52928659-52928678 MsG0880045029.01.T01:intron 15.0%
!!! AAATTTTGATAAATATAGTG+CGG + Chr8:52929274-52929293 None:intergenic 15.0%
!!! TAATGTATTTTTTTATTTGC+AGG - Chr8:52930439-52930458 MsG0880045029.01.T01:CDS 15.0%
!!! TATATTTATCAAAATTTTGC+CGG - Chr8:52929277-52929296 MsG0880045029.01.T01:CDS 15.0%
!! AAAAGGATCAATGAAATTTA+TGG - Chr8:52929581-52929600 MsG0880045029.01.T01:intron 20.0%
!! AAAGATAAGAAAGTTATTCT+TGG - Chr8:52929383-52929402 MsG0880045029.01.T01:intron 20.0%
!! GTTTCACTTAATATAAATAG+AGG + Chr8:52930769-52930788 None:intergenic 20.0%
!! TGCAAACAATATATTTGTAT+GGG + Chr8:52929729-52929748 None:intergenic 20.0%
!!! AACAATGAACACAATATTTT+TGG + Chr8:52930269-52930288 None:intergenic 20.0%
!!! ATAAATTTCATTGATCCTTT+TGG + Chr8:52929582-52929601 None:intergenic 20.0%
!!! GGTTTTATTAATATAGATTG+TGG + Chr8:52930200-52930219 None:intergenic 20.0%
!!! TTTTTCTATTTTCTTTTGGT+GGG + Chr8:52930409-52930428 None:intergenic 20.0%
!!! TTTTTTCTATTTTCTTTTGG+TGG + Chr8:52930410-52930429 None:intergenic 20.0%
! AAATATATTGTTTGCAGACA+GGG - Chr8:52929733-52929752 MsG0880045029.01.T01:intron 25.0%
! AAGCTTATTTAATTGCCAAA+AGG - Chr8:52929564-52929583 MsG0880045029.01.T01:intron 25.0%
! AATATTGTGTTCATTGTTAG+TGG - Chr8:52930271-52930290 MsG0880045029.01.T01:CDS 25.0%
! CAGGATTTATAATTTGAACA+AGG + Chr8:52929505-52929524 None:intergenic 25.0%
! CTGCAAACAATATATTTGTA+TGG + Chr8:52929730-52929749 None:intergenic 25.0%
! GCAAAGATCATTATACTAAA+AGG - Chr8:52930032-52930051 MsG0880045029.01.T01:intron 25.0%
! TCAAATTATAAATCCTGCAA+GGG - Chr8:52929508-52929527 MsG0880045029.01.T01:intron 25.0%
! TTCAAATTATAAATCCTGCA+AGG - Chr8:52929507-52929526 MsG0880045029.01.T01:intron 25.0%
! TTGTTGAATTCGGATTTAAT+TGG - Chr8:52929143-52929162 MsG0880045029.01.T01:CDS 25.0%
! TTTAGTATAATGATCTTTGC+AGG + Chr8:52930032-52930051 None:intergenic 25.0%
!! TCATGAATTTTCTCTTTACA+GGG - Chr8:52930816-52930835 MsG0880045029.01.T01:intron 25.0%
!!! TGTATTTTTTTATTTGCAGG+TGG - Chr8:52930442-52930461 MsG0880045029.01.T01:CDS 25.0%
AACCCAAACAAAATCATCAT+CGG + Chr8:52928982-52929001 None:intergenic 30.0%
AATATTTGCAGACAAAGTCA+TGG - Chr8:52928944-52928963 MsG0880045029.01.T01:intron 30.0%
AATTTGAAAAACTCTACCTG+TGG + Chr8:52930731-52930750 None:intergenic 30.0%
ATATGTTAGTACTCATGATG+TGG - Chr8:52929967-52929986 MsG0880045029.01.T01:CDS 30.0%
CAAATATATTGTTTGCAGAC+AGG - Chr8:52929732-52929751 MsG0880045029.01.T01:intron 30.0%
CAAATTATAAATCCTGCAAG+GGG - Chr8:52929509-52929528 MsG0880045029.01.T01:intron 30.0%
CAATATATTTGTATGGGACT+AGG + Chr8:52929723-52929742 None:intergenic 30.0%
CATACAAAGAACTAGTAGAA+GGG - Chr8:52930142-52930161 MsG0880045029.01.T01:CDS 30.0%
CATATAGGACTTGATTACTT+TGG - Chr8:52929248-52929267 MsG0880045029.01.T01:CDS 30.0%
GAGATATTGATACTGCTAAA+TGG - Chr8:52928611-52928630 MsG0880045029.01.T01:intron 30.0%
GATTTCATCGAGTTAAACTT+GGG - Chr8:52929045-52929064 MsG0880045029.01.T01:intron 30.0%
TAAGAAAGTTATTCTTGGTG+TGG - Chr8:52929388-52929407 MsG0880045029.01.T01:CDS 30.0%
TCTCAAAGGATTGTTGAATT+CGG - Chr8:52929133-52929152 MsG0880045029.01.T01:CDS 30.0%
TCTTTGTATGCTGATACATA+TGG + Chr8:52930132-52930151 None:intergenic 30.0%
TGGATCTAATATTGAAGTCA+AGG - Chr8:52930563-52930582 MsG0880045029.01.T01:CDS 30.0%
! AAGAAATATTTTGCCTTGCT+AGG + Chr8:52931030-52931049 None:intergenic 30.0%
! AGAGTTATTTCACTTTCTCA+TGG - Chr8:52930085-52930104 MsG0880045029.01.T01:intron 30.0%
! ATATCGATAGTGTTTTCTCA+TGG + Chr8:52929951-52929970 None:intergenic 30.0%
! ATCATTATACTAAAAGGTGC+TGG - Chr8:52930038-52930057 MsG0880045029.01.T01:intron 30.0%
! CCTGTGAATCAGAAATTTTT+GGG - Chr8:52931207-52931226 MsG0880045029.01.T01:CDS 30.0%
! GTCATGAATTTTCTCTTTAC+AGG - Chr8:52930815-52930834 MsG0880045029.01.T01:CDS 30.0%
! TCCTGTGAATCAGAAATTTT+TGG - Chr8:52931206-52931225 MsG0880045029.01.T01:CDS 30.0%
! TTTATCAAAATTTTGCCGGT+AGG - Chr8:52929281-52929300 MsG0880045029.01.T01:intron 30.0%
! TTTCACTTTCTCATGGTTTT+AGG - Chr8:52930092-52930111 MsG0880045029.01.T01:intron 30.0%
!! GACGACATGGATATTTTTAA+GGG - Chr8:52929410-52929429 MsG0880045029.01.T01:CDS 30.0%
!! TAAATTTCAGATGATGGGAA+AGG + Chr8:52929086-52929105 None:intergenic 30.0%
!! TCATTATACTAAAAGGTGCT+GGG - Chr8:52930039-52930058 MsG0880045029.01.T01:intron 30.0%
!!! CTGAACATGGTTACTTTTTA+AGG - Chr8:52930353-52930372 MsG0880045029.01.T01:CDS 30.0%
AAGTAGGCAAAATCATCAAG+TGG + Chr8:52929013-52929032 None:intergenic 35.0%
AATAAGCACTCTTCTCGAAA+CGG + Chr8:52929651-52929670 None:intergenic 35.0%
AATCGTTTCCTCAAGAAAGT+AGG + Chr8:52929029-52929048 None:intergenic 35.0%
ACCCAAACAAAATCATCATC+GGG + Chr8:52928981-52929000 None:intergenic 35.0%
AGCATATGGGTAGCATATAA+TGG + Chr8:52928866-52928885 None:intergenic 35.0%
ATGAATTTAGCCCTCAGTAT+GGG - Chr8:52929904-52929923 MsG0880045029.01.T01:CDS 35.0%
ATGCTGATACATATGGTCAA+TGG + Chr8:52930125-52930144 None:intergenic 35.0%
ATTTGTTTGCGGATCTTGAT+TGG - Chr8:52930493-52930512 MsG0880045029.01.T01:CDS 35.0%
CAAGAGATTCTCTGAATGAA+TGG - Chr8:52930299-52930318 MsG0880045029.01.T01:CDS 35.0%
CCCAAAAATTTCTGATTCAC+AGG + Chr8:52931210-52931229 None:intergenic 35.0%
CGATTTCATCGAGTTAAACT+TGG - Chr8:52929044-52929063 MsG0880045029.01.T01:intron 35.0%
CTCTAAGCTAAAAGAGATTC+AGG - Chr8:52929352-52929371 MsG0880045029.01.T01:intron 35.0%
CTCTTGAATATGGTTAATGC+CGG - Chr8:52930870-52930889 MsG0880045029.01.T01:intron 35.0%
GAACCAGCAATTGTTAAAAG+AGG - Chr8:52930684-52930703 MsG0880045029.01.T01:CDS 35.0%
GATACTGAGGTAATCTATGT+GGG - Chr8:52928691-52928710 MsG0880045029.01.T01:intron 35.0%
GATGTTGTAAAGTTGCTTGA+TGG - Chr8:52931062-52931081 MsG0880045029.01.T01:CDS 35.0%
GCATACAAAGAACTAGTAGA+AGG - Chr8:52930141-52930160 MsG0880045029.01.T01:CDS 35.0%
GCCATCATAATCAAGAAAGA+TGG + Chr8:52930168-52930187 None:intergenic 35.0%
GCCATCTTTCTTGATTATGA+TGG - Chr8:52930164-52930183 MsG0880045029.01.T01:CDS 35.0%
GGAAACAAGTCATTTGTTTG+CGG - Chr8:52930482-52930501 MsG0880045029.01.T01:CDS 35.0%
GTAAGGGATGAAATTCTCAA+AGG - Chr8:52929119-52929138 MsG0880045029.01.T01:CDS 35.0%
TAACATCTGATTCACCATCA+AGG + Chr8:52928528-52928547 None:intergenic 35.0%
TAAGCACAGATATGACTTCA+GGG + Chr8:52930228-52930247 None:intergenic 35.0%
TACTCATGATGTGGCATATT+GGG - Chr8:52929976-52929995 MsG0880045029.01.T01:CDS 35.0%
TATGAATTTAGCCCTCAGTA+TGG - Chr8:52929903-52929922 MsG0880045029.01.T01:CDS 35.0%
TCCGGTAAATTTCAGATGAT+GGG + Chr8:52929091-52929110 None:intergenic 35.0%
TCTCAAAAGAAACCTGGATT+GGG + Chr8:52931126-52931145 None:intergenic 35.0%
TGAAATTGCTCAGAGATTAC+TGG - Chr8:52928750-52928769 MsG0880045029.01.T01:CDS 35.0%
TGAGAAGGTTCTCTTGAATA+TGG - Chr8:52930860-52930879 MsG0880045029.01.T01:intron 35.0%
TGATACTGAGGTAATCTATG+TGG - Chr8:52928690-52928709 MsG0880045029.01.T01:intron 35.0%
TGCTAAATGGTGTTTCAGTT+GGG - Chr8:52928624-52928643 MsG0880045029.01.T01:intron 35.0%
TGTGTTCATTGTTAGTGGAA+GGG - Chr8:52930276-52930295 MsG0880045029.01.T01:CDS 35.0%
TTAAGCACAGATATGACTTC+AGG + Chr8:52930229-52930248 None:intergenic 35.0%
TTGAGAATTTCATCCCTTAC+TGG + Chr8:52929119-52929138 None:intergenic 35.0%
TTGTGTTCATTGTTAGTGGA+AGG - Chr8:52930275-52930294 MsG0880045029.01.T01:CDS 35.0%
TTTACATCATGCAAACTGCT+GGG - Chr8:52930322-52930341 MsG0880045029.01.T01:CDS 35.0%
! AATCTTTTAGACTTAGCTGG+TGG - Chr8:52928430-52928449 MsG0880045029.01.T01:CDS 35.0%
! ATCCCGATGATGATTTTGTT+TGG - Chr8:52928976-52928995 MsG0880045029.01.T01:intron 35.0%
! ATGTTAGTTCTTCTGGATGT+CGG - Chr8:52928542-52928561 MsG0880045029.01.T01:intron 35.0%
! ATTTGTTGAAGTTAAGCCAC+AGG - Chr8:52930712-52930731 MsG0880045029.01.T01:CDS 35.0%
! GAATCAGATGTTAGTTCTTC+TGG - Chr8:52928535-52928554 MsG0880045029.01.T01:intron 35.0%
! GCTAATCTTTTAGACTTAGC+TGG - Chr8:52928427-52928446 MsG0880045029.01.T01:CDS 35.0%
! TCCCATCATCTGAAATTTAC+CGG - Chr8:52929087-52929106 MsG0880045029.01.T01:CDS 35.0%
! TGATTTTGCCTACTTTCTTG+AGG - Chr8:52929018-52929037 MsG0880045029.01.T01:intron 35.0%
! TTTAGCTTAGAGGATGTAGA+AGG + Chr8:52929344-52929363 None:intergenic 35.0%
!! CAATCTGAAATTTCTAGCTG+TGG - Chr8:52929436-52929455 MsG0880045029.01.T01:CDS 35.0%
!! CATTATACTAAAAGGTGCTG+GGG - Chr8:52930040-52930059 MsG0880045029.01.T01:intron 35.0%
!! GGACGACATGGATATTTTTA+AGG - Chr8:52929409-52929428 MsG0880045029.01.T01:CDS 35.0%
!! TCCCGATGATGATTTTGTTT+GGG - Chr8:52928977-52928996 MsG0880045029.01.T01:intron 35.0%
!! TTTTGAGAGCACAGTTTCTT+AGG - Chr8:52931138-52931157 MsG0880045029.01.T01:CDS 35.0%
!!! CTGAATCTCTTTTAGCTTAG+AGG + Chr8:52929354-52929373 None:intergenic 35.0%
!!! TTTGGGCTTTTGATTTGTTG+AGG + Chr8:52931096-52931115 None:intergenic 35.0%
ACAAAATCGCACTATTCGTC+AGG + Chr8:52931246-52931265 None:intergenic 40.0%
ACAACTTCACCCTGCAAATT+TGG + Chr8:52929482-52929501 None:intergenic 40.0%
ACTGGATGACTTTAATTGCG+TGG - Chr8:52928768-52928787 MsG0880045029.01.T01:CDS 40.0%
AGCATCTATCTCAACCTTGA+GGG + Chr8:52928719-52928738 None:intergenic 40.0%
ATAACCCTTGGAAGACTTCT+TGG + Chr8:52928481-52928500 None:intergenic 40.0%
ATAAGCACTCTTCTCGAAAC+GGG + Chr8:52929650-52929669 None:intergenic 40.0%
ATCACCATGATCTGAGCATA+TGG + Chr8:52928880-52928899 None:intergenic 40.0%
CAACTTCACCCTGCAAATTT+GGG + Chr8:52929481-52929500 None:intergenic 40.0%
CCTGCAGAAAAGTTCTATCT+TGG - Chr8:52928810-52928829 MsG0880045029.01.T01:CDS 40.0%
CTCTCAAAAGAAACCTGGAT+TGG + Chr8:52931127-52931146 None:intergenic 40.0%
CTGCTAAATGGTGTTTCAGT+TGG - Chr8:52928623-52928642 MsG0880045029.01.T01:intron 40.0%
GAACCAACGATAATGCTGTT+TGG + Chr8:52931168-52931187 None:intergenic 40.0%
GGCTTAACTTCAACAAATGC+TGG + Chr8:52930710-52930729 None:intergenic 40.0%
GTACTCATGATGTGGCATAT+TGG - Chr8:52929975-52929994 MsG0880045029.01.T01:CDS 40.0%
GTCCGGTAAATTTCAGATGA+TGG + Chr8:52929092-52929111 None:intergenic 40.0%
GTGTGGATCAGATTCTTTCT+GGG - Chr8:52931268-52931287 MsG0880045029.01.T01:CDS 40.0%
GTTTACATCATGCAAACTGC+TGG - Chr8:52930321-52930340 MsG0880045029.01.T01:CDS 40.0%
TAACCCTTGGAAGACTTCTT+GGG + Chr8:52928480-52928499 None:intergenic 40.0%
TAGCAAGAACACTTTCCAAG+TGG + Chr8:52930662-52930681 None:intergenic 40.0%
TAGCATCTATCTCAACCTTG+AGG + Chr8:52928720-52928739 None:intergenic 40.0%
TCAAGGTCAGAAATAATCCC+AGG + Chr8:52928511-52928530 None:intergenic 40.0%
TCACCATGATCTGAGCATAT+GGG + Chr8:52928879-52928898 None:intergenic 40.0%
TCGTATACAGAAGCAACTGA+TGG - Chr8:52930543-52930562 MsG0880045029.01.T01:CDS 40.0%
TCTTTACAGGGAGTAACCAA+AGG - Chr8:52930828-52930847 MsG0880045029.01.T01:intron 40.0%
TGAATTTAGCCCTCAGTATG+GGG - Chr8:52929905-52929924 MsG0880045029.01.T01:CDS 40.0%
TGACTGAGGAGAAGAAACAA+AGG + Chr8:52930386-52930405 None:intergenic 40.0%
TGATGTGCATTGGAGATGAT+AGG - Chr8:52930910-52930929 MsG0880045029.01.T01:intron 40.0%
TTGCATCGTCAATGCTGTAA+GGG - Chr8:52929687-52929706 MsG0880045029.01.T01:intron 40.0%
! AGAACTTTTCTGCAGGTCAT+GGG + Chr8:52928806-52928825 None:intergenic 40.0%
! ATAGTGCGATTTTGTTGGTG+TGG - Chr8:52931251-52931270 MsG0880045029.01.T01:CDS 40.0%
! ATATCTCTTTTAGCCTGCAG+CGG + Chr8:52928598-52928617 None:intergenic 40.0%
! CCAAGATAGAACTTTTCTGC+AGG + Chr8:52928813-52928832 None:intergenic 40.0%
! CTTGTTGTGTCTGAGTTCAT+TGG - Chr8:52929814-52929833 MsG0880045029.01.T01:CDS 40.0%
! GACGAATAGTGCGATTTTGT+TGG - Chr8:52931246-52931265 MsG0880045029.01.T01:CDS 40.0%
! GGTAGCATATAATGGAAGAG+AGG + Chr8:52928858-52928877 None:intergenic 40.0%
! TAGAACTTTTCTGCAGGTCA+TGG + Chr8:52928807-52928826 None:intergenic 40.0%
! TGGCCTCTTTTAACAATTGC+TGG + Chr8:52930690-52930709 None:intergenic 40.0%
! TGGGTTTTCTTCTGATACTG+AGG - Chr8:52928678-52928697 MsG0880045029.01.T01:intron 40.0%
! TGTTAGTTCTTCTGGATGTC+GGG - Chr8:52928543-52928562 MsG0880045029.01.T01:intron 40.0%
!! ACGCAGTTTTATGCAGGATT+TGG - Chr8:52930000-52930019 MsG0880045029.01.T01:intron 40.0%
!! GGGATTATTTCTGACCTTGA+TGG - Chr8:52928511-52928530 MsG0880045029.01.T01:intron 40.0%
!! TGAAGTCAAGGAAAGTGCTT+TGG - Chr8:52930575-52930594 MsG0880045029.01.T01:CDS 40.0%
!! TTTGATTTGTTGAGGTAGCG+AGG + Chr8:52931088-52931107 None:intergenic 40.0%
AACCCTTGGAAGACTTCTTG+GGG + Chr8:52928479-52928498 None:intergenic 45.0%
AATCTATGTGGGTTCCCTCA+AGG - Chr8:52928702-52928721 MsG0880045029.01.T01:intron 45.0%
ACAACAAGCATGCTTGTACG+AGG + Chr8:52929802-52929821 None:intergenic 45.0%
ACAGATATGACTTCAGGGCT+GGG + Chr8:52930223-52930242 None:intergenic 45.0%
ACAGGGAGTAACCAAAGGTT+TGG - Chr8:52930833-52930852 MsG0880045029.01.T01:intron 45.0%
AGCAACTGCATCTATATCCC+AGG + Chr8:52929878-52929897 None:intergenic 45.0%
AGGCCAAACAGCATTATCGT+TGG - Chr8:52931162-52931181 MsG0880045029.01.T01:CDS 45.0%
ATAAATCCTGCAAGGGGTTC+AGG - Chr8:52929515-52929534 MsG0880045029.01.T01:intron 45.0%
ATCGTCAATGCTGTAAGGGA+TGG - Chr8:52929691-52929710 MsG0880045029.01.T01:intron 45.0%
ATGCACATCACGAAATCTGG+TGG + Chr8:52930900-52930919 None:intergenic 45.0%
ATGGTGTTTCAGTTGGGATG+AGG - Chr8:52928630-52928649 MsG0880045029.01.T01:intron 45.0%
CAAAGAATTGCTGGACCACT+TGG - Chr8:52930644-52930663 MsG0880045029.01.T01:CDS 45.0%
CAAGGGTTATGACTGTTCCT+GGG - Chr8:52928491-52928510 MsG0880045029.01.T01:intron 45.0%
CAAGTGGTCCAGCAATTCTT+TGG + Chr8:52930646-52930665 None:intergenic 45.0%
CAGCAGAACCCAAATTTGCA+GGG - Chr8:52929470-52929489 MsG0880045029.01.T01:intron 45.0%
CCAATGCACATCACGAAATC+TGG + Chr8:52930903-52930922 None:intergenic 45.0%
CCAGATTTCGTGATGTGCAT+TGG - Chr8:52930900-52930919 MsG0880045029.01.T01:intron 45.0%
CTACCCATATGCTCAGATCA+TGG - Chr8:52928873-52928892 MsG0880045029.01.T01:CDS 45.0%
CTACCCATGTGAATTCCTAC+CGG + Chr8:52929299-52929318 None:intergenic 45.0%
CTACCGTGCAAGCAAAATCT+CGG + Chr8:52930999-52931018 None:intergenic 45.0%
CTGGACTATGAATCTAAGCG+CGG - Chr8:52929224-52929243 MsG0880045029.01.T01:CDS 45.0%
CTGTGCTCTCAAAAGAAACC+TGG + Chr8:52931132-52931151 None:intergenic 45.0%
CTTCTCAGCTACCAAACCTT+TGG + Chr8:52930847-52930866 None:intergenic 45.0%
GAATCTAAGCGCGGACATAT+AGG - Chr8:52929233-52929252 MsG0880045029.01.T01:CDS 45.0%
GAATTTAGCCCTCAGTATGG+GGG - Chr8:52929906-52929925 MsG0880045029.01.T01:CDS 45.0%
GCAACTGCATCTATATCCCA+GGG + Chr8:52929877-52929896 None:intergenic 45.0%
GGATCTTGATTGGAAACAGG+TGG - Chr8:52930503-52930522 MsG0880045029.01.T01:CDS 45.0%
GGTGTGGATCAGATTCTTTC+TGG - Chr8:52931267-52931286 MsG0880045029.01.T01:CDS 45.0%
GTGGAATAGCGACTCTGAAT+GGG - Chr8:52930461-52930480 MsG0880045029.01.T01:CDS 45.0%
GTTGCATCGTCAATGCTGTA+AGG - Chr8:52929686-52929705 MsG0880045029.01.T01:intron 45.0%
GTTGTTCACCTTCTCTGAGT+GGG - Chr8:52929836-52929855 MsG0880045029.01.T01:CDS 45.0%
TAAATCCTGCAAGGGGTTCA+GGG - Chr8:52929516-52929535 MsG0880045029.01.T01:intron 45.0%
TACCGTGCAAGCAAAATCTC+GGG + Chr8:52930998-52931017 None:intergenic 45.0%
TCGTCAATGCTGTAAGGGAT+GGG - Chr8:52929692-52929711 MsG0880045029.01.T01:intron 45.0%
TCTGTATACGACTGCATGAC+AGG + Chr8:52930534-52930553 None:intergenic 45.0%
TCTTGCTGCAGTAGAATGCT+AGG - Chr8:52929200-52929219 MsG0880045029.01.T01:CDS 45.0%
TGAGATAGATGCTAGTGAGC+AGG - Chr8:52928726-52928745 MsG0880045029.01.T01:intron 45.0%
TGCGGATCTTGATTGGAAAC+AGG - Chr8:52930500-52930519 MsG0880045029.01.T01:CDS 45.0%
TTACCGGACTTTGCCAGTAA+GGG - Chr8:52929103-52929122 MsG0880045029.01.T01:CDS 45.0%
TTCTTTCTGGGCTCCTGAAT+CGG - Chr8:52931280-52931299 MsG0880045029.01.T01:CDS 45.0%
TTGCCGGTAGGAATTCACAT+GGG - Chr8:52929293-52929312 MsG0880045029.01.T01:intron 45.0%
TTGTTCACCTTCTCTGAGTG+GGG - Chr8:52929837-52929856 MsG0880045029.01.T01:CDS 45.0%
TTTACCGGACTTTGCCAGTA+AGG - Chr8:52929102-52929121 MsG0880045029.01.T01:CDS 45.0%
TTTGCCGGTAGGAATTCACA+TGG - Chr8:52929292-52929311 MsG0880045029.01.T01:intron 45.0%
! ATGATGGGAAAGGACTGTGA+AGG + Chr8:52929076-52929095 None:intergenic 45.0%
! ATTTTGCTTGCACGGTAGGT+AGG - Chr8:52931001-52931020 MsG0880045029.01.T01:CDS 45.0%
! CAAAGGTTTGGTAGCTGAGA+AGG - Chr8:52930845-52930864 MsG0880045029.01.T01:intron 45.0%
! CAAGATGCAGACCCTGATTT+TGG - Chr8:52930609-52930628 MsG0880045029.01.T01:CDS 45.0%
! CTGGATTGGGCAAGATGTTT+GGG + Chr8:52931113-52931132 None:intergenic 45.0%
! GAACTTTTCTGCAGGTCATG+GGG + Chr8:52928805-52928824 None:intergenic 45.0%
! GAGCGGTCAATGATAATGAC+TGG + Chr8:52929623-52929642 None:intergenic 45.0%
! GTTTTTGTAAGCAGCAGCTC+TGG - Chr8:52928832-52928851 MsG0880045029.01.T01:CDS 45.0%
! TATTCTTGGTGTGGACGACA+TGG - Chr8:52929397-52929416 MsG0880045029.01.T01:CDS 45.0%
!! ACTAAAAGGTGCTGGGGAAT+TGG - Chr8:52930046-52930065 MsG0880045029.01.T01:intron 45.0%
!! ATCGTTGGTTCGTTATGCGA+GGG - Chr8:52931177-52931196 MsG0880045029.01.T01:CDS 45.0%
!! CACGAAATCTGGTGGATTAC+CGG + Chr8:52930892-52930911 None:intergenic 45.0%
!! TATCGTTGGTTCGTTATGCG+AGG - Chr8:52931176-52931195 MsG0880045029.01.T01:CDS 45.0%
!! TCAAGGAAAGTGCTTTGGTG+TGG - Chr8:52930580-52930599 MsG0880045029.01.T01:CDS 45.0%
!! TTTCTTTTGGTGGGTGACTG+AGG + Chr8:52930400-52930419 None:intergenic 45.0%
ACACCCCAAGAAGTCTTCCA+AGG - Chr8:52928473-52928492 MsG0880045029.01.T01:intron 50.0%
AGATATGACTTCAGGGCTGG+GGG + Chr8:52930221-52930240 None:intergenic 50.0%
AGCAAAATCTCGGGAGCTGA+TGG + Chr8:52930989-52931008 None:intergenic 50.0%
ATCGCTTTGACCGAGTGCTT+TGG - Chr8:52928898-52928917 MsG0880045029.01.T01:CDS 50.0%
CACAGATATGACTTCAGGGC+TGG + Chr8:52930224-52930243 None:intergenic 50.0%
CACCCCAAGAAGTCTTCCAA+GGG - Chr8:52928474-52928493 MsG0880045029.01.T01:intron 50.0%
CAGATATGACTTCAGGGCTG+GGG + Chr8:52930222-52930241 None:intergenic 50.0%
CATCCCTTACTGGCAAAGTC+CGG + Chr8:52929109-52929128 None:intergenic 50.0%
CCAAACATCTTGCCCAATCC+AGG - Chr8:52931111-52931130 MsG0880045029.01.T01:CDS 50.0%
CCAAGGGTTATGACTGTTCC+TGG - Chr8:52928490-52928509 MsG0880045029.01.T01:intron 50.0%
CCAGGAACAGTCATAACCCT+TGG + Chr8:52928493-52928512 None:intergenic 50.0%
CGGTAGGAATTCACATGGGT+AGG - Chr8:52929297-52929316 MsG0880045029.01.T01:intron 50.0%
CTCAGAAACCCCCATACTGA+GGG + Chr8:52929917-52929936 None:intergenic 50.0%
CTGCAGTAGAATGCTAGGTC+TGG - Chr8:52929205-52929224 MsG0880045029.01.T01:CDS 50.0%
CTGCCAAGCCAAAGAATTGC+TGG - Chr8:52930635-52930654 MsG0880045029.01.T01:CDS 50.0%
CTTGGCAGGAGCCAAAATCA+GGG + Chr8:52930623-52930642 None:intergenic 50.0%
GCAAAGCTGGATGAAGCTGT+GGG - Chr8:52929760-52929779 MsG0880045029.01.T01:intron 50.0%
GCAGCAGAACCCAAATTTGC+AGG - Chr8:52929469-52929488 MsG0880045029.01.T01:intron 50.0%
GGTCCAGCAATTCTTTGGCT+TGG + Chr8:52930641-52930660 None:intergenic 50.0%
GGTGGAATAGCGACTCTGAA+TGG - Chr8:52930460-52930479 MsG0880045029.01.T01:CDS 50.0%
GGTTGTTCACCTTCTCTGAG+TGG - Chr8:52929835-52929854 MsG0880045029.01.T01:CDS 50.0%
TCGGGAGCGGAAAATCATTG+TGG - Chr8:52928561-52928580 MsG0880045029.01.T01:intron 50.0%
TCTCAGAAACCCCCATACTG+AGG + Chr8:52929918-52929937 None:intergenic 50.0%
TGCAAAGCTGGATGAAGCTG+TGG - Chr8:52929759-52929778 MsG0880045029.01.T01:intron 50.0%
TTCTCGAAACGGGAACAGAG+CGG + Chr8:52929640-52929659 None:intergenic 50.0%
! CATAAGCCTGCCAAAGCACT+CGG + Chr8:52928911-52928930 None:intergenic 50.0%
! CCTGGATTGGGCAAGATGTT+TGG + Chr8:52931114-52931133 None:intergenic 50.0%
! CGAGATTTTGCTTGCACGGT+AGG - Chr8:52930997-52931016 MsG0880045029.01.T01:CDS 50.0%
! CTCCCGAGATTTTGCTTGCA+CGG - Chr8:52930993-52931012 MsG0880045029.01.T01:CDS 50.0%
! GAGAGCACAGTTTCTTAGGC+AGG - Chr8:52931142-52931161 MsG0880045029.01.T01:CDS 50.0%
! GATGCCATGCAAACCGATTC+AGG + Chr8:52931296-52931315 None:intergenic 50.0%
!! CAGCAATTCTTTGGCTTGGC+AGG + Chr8:52930637-52930656 None:intergenic 50.0%
!! GAATCGGTTTGCATGGCATC+AGG - Chr8:52931296-52931315 MsG0880045029.01.T01:CDS 50.0%
!! TTGGGCACGCAGTTTTATGC+AGG - Chr8:52929994-52930013 MsG0880045029.01.T01:intron 50.0%
ATCCCAGGGATTGACCCTGA+TGG + Chr8:52929863-52929882 None:intergenic 55.0%
CAGACAGGGAACTGCAAAGC+TGG - Chr8:52929747-52929766 MsG0880045029.01.T01:intron 55.0%
CAGGTCATGGGGTAGAAAGG+TGG + Chr8:52928794-52928813 None:intergenic 55.0%
CGGTTTGCATGGCATCAGGA+AGG - Chr8:52931300-52931319 MsG0880045029.01.T01:CDS 55.0%
CTGCAGGTCATGGGGTAGAA+AGG + Chr8:52928797-52928816 None:intergenic 55.0%
CTGGGACTTGCAGCTGAACA+TGG - Chr8:52930340-52930359 MsG0880045029.01.T01:CDS 55.0%
CTTTGACCGAGTGCTTTGGC+AGG - Chr8:52928902-52928921 MsG0880045029.01.T01:CDS 55.0%
GAAGGTTGACGTGTGGTTCG+TGG - Chr8:52931318-52931337 MsG0880045029.01.T01:CDS 55.0%
GCATCAGGAAGGTTGACGTG+TGG - Chr8:52931311-52931330 MsG0880045029.01.T01:CDS 55.0%
GCTTGGCAGGAGCCAAAATC+AGG + Chr8:52930624-52930643 None:intergenic 55.0%
GGAAGACTTCTTGGGGTGTG+AGG + Chr8:52928472-52928491 None:intergenic 55.0%
GGGTTCAGGGAAGGATGTTC+AGG - Chr8:52929529-52929548 MsG0880045029.01.T01:intron 55.0%
GGTAGGTAGGAAGCCTAGCA+AGG - Chr8:52931014-52931033 MsG0880045029.01.T01:CDS 55.0%
GTTCTTCTGGATGTCGGGAG+CGG - Chr8:52928548-52928567 MsG0880045029.01.T01:intron 55.0%
TTCTCTGAGTGGGGCCATCA+GGG - Chr8:52929846-52929865 MsG0880045029.01.T01:CDS 55.0%
! TCGGGAGCTGATGGTAACGA+CGG + Chr8:52930980-52930999 None:intergenic 55.0%
! TGGGGAATTGGTCTGGGCTT+GGG - Chr8:52930058-52930077 MsG0880045029.01.T01:intron 55.0%
!! AAGGTGCTGGGGAATTGGTC+TGG - Chr8:52930051-52930070 MsG0880045029.01.T01:intron 55.0%
!! AGGTGCTGGGGAATTGGTCT+GGG - Chr8:52930052-52930071 MsG0880045029.01.T01:intron 55.0%
!! GGCTCCTGAATCGGTTTGCA+TGG - Chr8:52931289-52931308 MsG0880045029.01.T01:CDS 55.0%
CTGATGGCCCCACTCAGAGA+AGG + Chr8:52929847-52929866 None:intergenic 60.0%
CTTCTCTGAGTGGGGCCATC+AGG - Chr8:52929845-52929864 MsG0880045029.01.T01:CDS 60.0%
GGCAAACATGTTGCCGCTGC+AGG - Chr8:52928582-52928601 MsG0880045029.01.T01:intron 60.0%
GGCCATCAGGGTCAATCCCT+GGG - Chr8:52929858-52929877 MsG0880045029.01.T01:CDS 60.0%
TCCTGCAAGGGGTTCAGGGA+AGG - Chr8:52929520-52929539 MsG0880045029.01.T01:intron 60.0%
TCCTTCCCTGAACCCCTTGC+AGG + Chr8:52929524-52929543 None:intergenic 60.0%
! CTGGGGAATTGGTCTGGGCT+TGG - Chr8:52930057-52930076 MsG0880045029.01.T01:intron 60.0%
! GGGGAATTGGTCTGGGCTTG+GGG - Chr8:52930059-52930078 MsG0880045029.01.T01:intron 60.0%
GGGCCATCAGGGTCAATCCC+TGG - Chr8:52929857-52929876 MsG0880045029.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 52928409 52931349 52928409 ID=MsG0880045029.01;Name=MsG0880045029.01
Chr8 mRNA 52928409 52931349 52928409 ID=MsG0880045029.01.T01;Parent=MsG0880045029.01;Name=MsG0880045029.01.T01;_AED=0.32;_eAED=0.32;_QI=0|0.16|0|1|1|1|7|0|651
Chr8 exon 52930921 52931349 52930921 ID=MsG0880045029.01.T01:exon:22732;Parent=MsG0880045029.01.T01
Chr8 exon 52930097 52930834 52930097 ID=MsG0880045029.01.T01:exon:22731;Parent=MsG0880045029.01.T01
Chr8 exon 52929784 52930004 52929784 ID=MsG0880045029.01.T01:exon:22730;Parent=MsG0880045029.01.T01
Chr8 exon 52929384 52929467 52929384 ID=MsG0880045029.01.T01:exon:22729;Parent=MsG0880045029.01.T01
Chr8 exon 52929063 52929297 52929063 ID=MsG0880045029.01.T01:exon:22728;Parent=MsG0880045029.01.T01
Chr8 exon 52928744 52928921 52928744 ID=MsG0880045029.01.T01:exon:22727;Parent=MsG0880045029.01.T01
Chr8 exon 52928409 52928479 52928409 ID=MsG0880045029.01.T01:exon:22726;Parent=MsG0880045029.01.T01
Chr8 CDS 52930921 52931349 52930921 ID=MsG0880045029.01.T01:cds;Parent=MsG0880045029.01.T01
Chr8 CDS 52930097 52930834 52930097 ID=MsG0880045029.01.T01:cds;Parent=MsG0880045029.01.T01
Chr8 CDS 52929784 52930004 52929784 ID=MsG0880045029.01.T01:cds;Parent=MsG0880045029.01.T01
Chr8 CDS 52929384 52929467 52929384 ID=MsG0880045029.01.T01:cds;Parent=MsG0880045029.01.T01
Chr8 CDS 52929063 52929297 52929063 ID=MsG0880045029.01.T01:cds;Parent=MsG0880045029.01.T01
Chr8 CDS 52928744 52928921 52928744 ID=MsG0880045029.01.T01:cds;Parent=MsG0880045029.01.T01
Chr8 CDS 52928409 52928479 52928409 ID=MsG0880045029.01.T01:cds;Parent=MsG0880045029.01.T01
Gene Sequence

>MsG0880045029.01.T01

ATGACATCAAGATCGTATGCTAATCTTTTAGACTTAGCTGGTGGAGACTTGCTTGATATTCCTCACACCCCAAGAAGTCTTCCAAGGGTTATGACTGTTCCTGGGATTATTTCTGACCTTGATGGTGAATCAGATGTTAGTTCTTCTGGATGTCGGGAGCGGAAAATCATTGTGGCAAACATGTTGCCGCTGCAGGCTAAAAGAGATATTGATACTGCTAAATGGTGTTTCAGTTGGGATGAGGATTCAATTCTATTACAATTAAAAGATGGGTTTTCTTCTGATACTGAGGTAATCTATGTGGGTTCCCTCAAGGTTGAGATAGATGCTAGTGAGCAGGATGAAATTGCTCAGAGATTACTGGATGACTTTAATTGCGTGGCCACCTTTCTACCCCATGACCTGCAGAAAAGTTCTATCTTGGTTTTTGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAAGTCATGGAAGTGATTGATCCCGATGATGATTTTGTTTGGGTTCATGACTACCACTTGATGATTTTGCCTACTTTCTTGAGGAAACGATTTCATCGAGTTAAACTTGGGTTTTTCCTTCACAGTCCTTTCCCATCATCTGAAATTTACCGGACTTTGCCAGTAAGGGATGAAATTCTCAAAGGATTGTTGAATTCGGATTTAATTGGTTTTCATACATTCGATTACGCACGTCACTTTCTTTCTTGCTGCAGTAGAATGCTAGGTCTGGACTATGAATCTAAGCGCGGACATATAGGACTTGATTACTTTGGCCGCACTATATTTATCAAAATTTTGCCGGTAGGAATTCACATGGGTAGGCTTGACTCTGTATTAAATCTTCCTTCTACATCCTCTAAGCTAAAAGAGATTCAGGAAGAGTTTAAAGATAAGAAAGTTATTCTTGGTGTGGACGACATGGATATTTTTAAGGGTATCAATCTGAAATTTCTAGCTGTGGAACAGCTGCTGCAGCAGAACCCAAATTTGCAGGGTGAAGTTGTCCTTGTTCAAATTATAAATCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAAAGAAGCTTATTTAATTGCCAAAAGGATCAATGAAATTTATGGTTCAAAACATTATCAGCCAGTCATTATCATTGACCGCTCTGTTCCCGTTTCGAGAAGAGGAACTGCAAAGCTGGATGAAGCTGTGGGTAGACAAAGTGATTCTCCTCGTACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCACCTTCTCTGAGTGGGGCCATCAGGGTCAATCCCTGGGATATAGATGCAGTTGCTGATGCTATGAATTTAGCCCTCAGTATGGGGGTTTCTGAGAAGAAGTTGCGCCATGAGAAAACACTATCGATATGTTATGGAAGGGCAAGAGATTCTCTGAATGAATGGTTTACATCATGCAAACTGCTGGGACTTGCAGCTGAACATGGTTACTTTTTAAGGTGGAATAGCGACTCTGAATGGGAAACAAGTCATTTGTTTGCGGATCTTGATTGGAAACAGGTGGTGCTGCCTGTCATGCAGTCGTATACAGAAGCAACTGATGGATCTAATATTGAAGTCAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCAGACCCTGATTTTGGCTCCTGCCAAGCCAAAGAATTGCTGGACCACTTGGAAAGTGTTCTTGCTAATGAACCAGCAATTGGAGTAACCAAAGGTTTGGTAGCTGAGAAGGTTCTCTTGAATATGGTTAATGCCGGTAATCCACCAGATTTCGTGATGTGCATTGGAGATGATAGGTCTGATGAAGACATGTTTGAAAGCATTTTGAGTACAGTCTCGTGCCGTCGTTACCATCAGCTCCCGAGATTTTGCTTGCACGATTCTTTCTGGGCTCCTGAATCGGTTTGCATGGCATCAGGAAGGTTGACGTGTGGTTCGTGGATGATCTGA
Protein sequence

>MsG0880045029.01.T01

MTSRSYANLLDLAGGDLLDIPHTPRSLPRVMTVPGIISDLDGESDVSSSGCRERKIIVANMLPLQAKRDIDTAKWCFSWDEDSILLQLKDGFSSDTEVIYVGSLKVEIDASEQDEIAQRLLDDFNCVATFLPHDLQKSSILVFAYVSANKIFADKVMEVIDPDDDFVWVHDYHLMILPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHMGRLDSVLNLPSTSSKLKEIQEEFKDKKVILGVDDMDIFKGINLKFLAVEQLLQQNPNLQGEVVLVQIINPARGSGKDVQEAKKEAYLIAKRINEIYGSKHYQPVIIIDRSVPVSRRGTAKLDEAVGRQSDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMNLALSMGVSEKKLRHEKTLSICYGRARDSLNEWFTSCKLLGLAAEHGYFLRWNSDSEWETSHLFADLDWKQVVLPVMQSYTEATDGSNIEVKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAIGVTKGLVAEKVLLNMVNAGNPPDFVMCIGDDRSDEDMFESILSTVSCRRYHQLPRFCLHDSFWAPESVCMASGRLTCGSWMI*