AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045932.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045932.01.T01 MTR_4g095055 87.246 345 14 2 5 319 73 417 0.0 597
MsG0880045932.01.T01 MTR_4g095055 80.617 227 14 2 5 201 73 299 2.56e-121 357
MsG0880045932.01.T01 MTR_4g095055 97.541 122 3 0 198 319 369 490 1.25e-77 245
MsG0880045932.01.T01 MTR_2g072470 35.463 313 158 5 11 293 103 401 6.41e-55 184
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045932.01.T01 AT2G34630 66.087 345 86 3 5 319 79 422 4.07e-161 456
MsG0880045932.01.T01 AT2G34630 65.217 322 81 3 28 319 1 321 3.05e-148 420
MsG0880045932.01.T01 AT1G17050 35.556 315 159 5 11 295 99 399 1.27e-54 184
MsG0880045932.01.T01 AT1G78510 34.921 315 161 5 11 295 49 349 1.25e-51 174
MsG0880045932.01.T01 AT1G78510 34.921 315 161 5 11 295 88 388 5.07e-51 174

Find 80 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGAGTATTTCTTCAAAA+TGG 0.167808 8:+66640309 MsG0880045932.01.T01:CDS
GCTGATGAACTATCATTTAT+TGG 0.236411 8:+66640112 MsG0880045932.01.T01:CDS
GGGGAAAATAAGTTATTTCT+AGG 0.259536 8:+66645330 MsG0880045932.01.T01:three_prime_UTR
TCATCAGCCACCAGAGAAAA+TGG 0.290830 8:-66640097 None:intergenic
GTTGTAGATCATCTTGTAAC+AGG 0.308074 8:+66642573 MsG0880045932.01.T01:CDS
CATGTAGGTTGTATCTTTGT+TGG 0.311648 8:+66642545 MsG0880045932.01.T01:intron
ATTTAATATATGAAAGAAAA+AGG 0.312078 8:-66645367 None:intergenic
TCCTCCATTGCAAACAATAT+TGG 0.312181 8:-66644564 None:intergenic
CTCCATTGCAGGAGGTGCTT+TGG 0.326251 8:-66641149 None:intergenic
CTTCCACAATTGCACGCAAC+TGG 0.328436 8:-66644593 None:intergenic
TCCATTGCAGGAGGTGCTTT+GGG 0.330216 8:-66641148 None:intergenic
GCAGGAGGTGCTTTGGGAAT+TGG 0.349099 8:-66641142 None:intergenic
GCTGAGTATTTCTTCAAAAT+GGG 0.353503 8:+66640310 MsG0880045932.01.T01:CDS
GTGCAGGCTTTGGATTATCT+TGG 0.354120 8:+66645014 MsG0880045932.01.T01:intron
TTCTACCACCGTTCCCCAAT+GGG 0.358362 8:+66645310 MsG0880045932.01.T01:three_prime_UTR
AGCTTATTTGTTGAATTGTT+CGG 0.369233 8:+66645530 MsG0880045932.01.T01:three_prime_UTR
AAGGCAATAGCCATCCTTGC+AGG 0.372497 8:+66642909 MsG0880045932.01.T01:CDS
CTTACAATGTTAACGTTCTC+GGG 0.385589 8:-66644630 None:intergenic
GCTTACAATGTTAACGTTCT+CGG 0.398725 8:-66644631 None:intergenic
AAATGGAATCCTCTACGAAA+TGG 0.408399 8:-66645560 None:intergenic
GTACCTCCAAGCTCCATTGC+AGG 0.408624 8:-66641160 None:intergenic
TGCAGGCTTTGGATTATCTT+GGG 0.414825 8:+66645015 MsG0880045932.01.T01:intron
TCCAATATTGTTTGCAATGG+AGG 0.429913 8:+66644563 MsG0880045932.01.T01:CDS
CCTTCTTCATGATGACGTAT+TGG 0.438576 8:+66642141 MsG0880045932.01.T01:CDS
TCTACGGCGACAATTTGTTC+TGG 0.444223 8:+66645271 MsG0880045932.01.T01:three_prime_UTR
AGCTCCAATATTGTTTGCAA+TGG 0.449854 8:+66644560 MsG0880045932.01.T01:CDS
GCGGATACCAGACGTGGTAT+TGG 0.449898 8:+66642169 MsG0880045932.01.T01:CDS
TGGTAACAAGCTGCGAGAAA+TGG 0.453898 8:+66640132 MsG0880045932.01.T01:CDS
GCACCTCCTGCAATGGAGCT+TGG 0.456402 8:+66641154 MsG0880045932.01.T01:CDS
AGCTGTTTGCCCTGCAAGGA+TGG 0.462934 8:-66642919 None:intergenic
TTCCACAATTGCACGCAACT+GGG 0.473988 8:-66644592 None:intergenic
GTACAAACTGAAATGATACT+TGG 0.485072 8:+66645446 MsG0880045932.01.T01:three_prime_UTR
TAATGAACCAATACCACGTC+TGG 0.487571 8:-66642176 None:intergenic
TGCGTTGTTGTCTTGAACGT+AGG 0.493063 8:-66641195 None:intergenic
TCAGCAGCTGAGGCAAGCTT+AGG 0.498034 8:-66640292 None:intergenic
CACATCAGCTTCCCTTGGAA+AGG 0.503331 8:+66643260 MsG0880045932.01.T01:CDS
CTATCTGAGTAAGTTCTACA+AGG 0.503656 8:-66645157 None:intergenic
ACAGGCACATCAGCTTCCCT+TGG 0.506972 8:+66643255 MsG0880045932.01.T01:CDS
ACATCAGCTTCCCTTGGAAA+GGG 0.512235 8:+66643261 MsG0880045932.01.T01:CDS
CTTCAGCTGTTTGCCCTGCA+AGG 0.517651 8:-66642923 None:intergenic
CTTCTACCACCGTTCCCCAA+TGG 0.527456 8:+66645309 MsG0880045932.01.T01:three_prime_UTR
CCAATACGTCATCATGAAGA+AGG 0.527493 8:-66642141 None:intergenic
TCCCAAAGCACCTCCTGCAA+TGG 0.537082 8:+66641147 MsG0880045932.01.T01:CDS
ATGAAGAAGTAAGAAAATCA+AGG 0.537422 8:+66645129 MsG0880045932.01.T01:CDS
TGGTTCATTAAACTTTGTAG+TGG 0.540029 8:+66642189 MsG0880045932.01.T01:CDS
TCCACAATTGCACGCAACTG+GGG 0.540197 8:-66644591 None:intergenic
GTTGCGTGCAATTGTGGAAG+AGG 0.540435 8:+66644596 MsG0880045932.01.T01:CDS
AAACTTTGTAGTGGGACCTA+AGG 0.544388 8:+66642198 MsG0880045932.01.T01:CDS
TACAAACGACACACTGACAG+AGG 0.550169 8:-66645426 None:intergenic
CCTCCTGCAATGGAGCTTGG+AGG 0.551359 8:+66641157 MsG0880045932.01.T01:CDS
GGTTCATTAAACTTTGTAGT+GGG 0.553499 8:+66642190 MsG0880045932.01.T01:CDS
TGCAAGGTTAGCATGCTTCA+CGG 0.558614 8:-66645072 None:intergenic
CTGAGTATTTCTTCAAAATG+GGG 0.559797 8:+66640311 MsG0880045932.01.T01:CDS
CTGATAAAGAACCCTTTCCA+AGG 0.564971 8:-66643272 None:intergenic
ATTAATATCAAACAGTTGCA+AGG 0.570892 8:+66642890 MsG0880045932.01.T01:CDS
TTGCGTGCAATTGTGGAAGA+GGG 0.579624 8:+66644597 MsG0880045932.01.T01:CDS
AATCAATTGCTTCTGCTGCA+AGG 0.579734 8:-66645088 None:intergenic
CATTACAAGAACAAAATGAC+AGG 0.581375 8:+66645181 MsG0880045932.01.T01:exon
AGGCAATAGCCATCCTTGCA+GGG 0.594240 8:+66642910 MsG0880045932.01.T01:CDS
GAAGAAATACTCAGCAGCTG+AGG 0.607565 8:-66640302 None:intergenic
GATTATCTTGGGAAAAGCCG+AGG 0.610650 8:+66645026 MsG0880045932.01.T01:CDS
CAACATCTGATCAACGGTGT+AGG 0.613960 8:+66642616 MsG0880045932.01.T01:CDS
CCACAATTGCACGCAACTGG+GGG 0.623541 8:-66644590 None:intergenic
ACAAGAACAAAATGACAGGA+AGG 0.623638 8:+66645185 MsG0880045932.01.T01:exon
TGATAAAGAACCCTTTCCAA+GGG 0.623931 8:-66643271 None:intergenic
TTGTAGATCATCTTGTAACA+GGG 0.625922 8:+66642574 MsG0880045932.01.T01:CDS
GTACATCCGAAGTGAAGTAG+TGG 0.628616 8:+66645491 MsG0880045932.01.T01:three_prime_UTR
TGACTTCAACATCTGATCAA+CGG 0.633122 8:+66642610 MsG0880045932.01.T01:CDS
AGTCTTCCACTACTTCACTT+CGG 0.636312 8:-66645497 None:intergenic
GCGAGAAATGGTAGTTACTG+AGG 0.652160 8:+66640144 MsG0880045932.01.T01:CDS
CCGAGGTATACAAAAGACAA+AGG 0.652540 8:+66645043 MsG0880045932.01.T01:CDS
TGAGTATTTCTTCAAAATGG+GGG 0.654937 8:+66640312 MsG0880045932.01.T01:CDS
TTACAATGTTAACGTTCTCG+GGG 0.662183 8:-66644629 None:intergenic
TGTAGATCATCTTGTAACAG+GGG 0.675238 8:+66642575 MsG0880045932.01.T01:CDS
ACAAACGACACACTGACAGA+GGG 0.675349 8:-66645425 None:intergenic
CCTCCAAGCTCCATTGCAGG+AGG 0.677487 8:-66641157 None:intergenic
TCTACCACCGTTCCCCAATG+GGG 0.694221 8:+66645311 MsG0880045932.01.T01:three_prime_UTR
TATCTGAGTAAGTTCTACAA+GGG 0.708648 8:-66645156 None:intergenic
TGATGACGTATTGGACGATG+CGG 0.719378 8:+66642150 MsG0880045932.01.T01:CDS
GACGATGCGGATACCAGACG+TGG 0.726192 8:+66642163 MsG0880045932.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAAATAAAACAAAAA+TGG - Chr8:66645220-66645239 None:intergenic 10.0%
!! AAACAAAATAAAACAAAAAT+GGG - Chr8:66645219-66645238 None:intergenic 10.0%
!! ATTTAATATATGAAAGAAAA+AGG - Chr8:66645370-66645389 None:intergenic 10.0%
!! TAATAAATGAAAATTTCTAA+AGG - Chr8:66641253-66641272 None:intergenic 10.0%
!!! AAATGTAATTAATTTTGTAT+GGG + Chr8:66644045-66644064 MsG0880045932.01.T01:intron 10.0%
!!! ATTATTTTGTAATATAATAG+TGG - Chr8:66642092-66642111 None:intergenic 10.0%
!!! ATTTTTGTTTTATTTTGTTT+TGG + Chr8:66645219-66645238 MsG0880045932.01.T01:three_prime_UTR 10.0%
!! AACAAAATAAAACAAAAATG+GGG - Chr8:66645218-66645237 None:intergenic 15.0%
!! ATATAAGAGAAGAAAAAAAA+AGG - Chr8:66645399-66645418 None:intergenic 15.0%
!! TTACAAATTATAACGAAATT+TGG - Chr8:66643560-66643579 None:intergenic 15.0%
!!! GAAATGTAATTAATTTTGTA+TGG + Chr8:66644044-66644063 MsG0880045932.01.T01:intron 15.0%
!! AACAAGAAAATTCATGAATA+AGG - Chr8:66641041-66641060 None:intergenic 20.0%
!! AATTATGTAATCACATAACA+AGG - Chr8:66644982-66645001 None:intergenic 20.0%
!! ACAAAATAAAACAAAAATGG+GGG - Chr8:66645217-66645236 None:intergenic 20.0%
!! ACAAAATTGTCCTTAATAAA+TGG + Chr8:66644091-66644110 MsG0880045932.01.T01:intron 20.0%
!! AGTTATTCATGGTAAAAATT+GGG + Chr8:66640253-66640272 MsG0880045932.01.T01:intron 20.0%
!! ATATATGAAAGAAAAAGGAA+TGG - Chr8:66645365-66645384 None:intergenic 20.0%
!! ATCTTAAAAATGGAAATACA+AGG + Chr8:66640659-66640678 MsG0880045932.01.T01:intron 20.0%
!! ATTATGTAATCACATAACAA+GGG - Chr8:66644981-66645000 None:intergenic 20.0%
!! CAACAATGTTAAATTTAGAA+TGG - Chr8:66640944-66640963 None:intergenic 20.0%
!! CTACTAAACGAATAAAAATT+AGG + Chr8:66643664-66643683 MsG0880045932.01.T01:intron 20.0%
!! TACAATAAATGCGTAATATA+TGG + Chr8:66642425-66642444 MsG0880045932.01.T01:intron 20.0%
!! TCAAAATTCTGTCAAAAATA+AGG - Chr8:66643786-66643805 None:intergenic 20.0%
!! TGAGAAGATGTATTATATAT+AGG + Chr8:66642465-66642484 MsG0880045932.01.T01:intron 20.0%
!! TGCATATTTATCATTGTAAA+TGG + Chr8:66640423-66640442 MsG0880045932.01.T01:intron 20.0%
!! TGTGTATAATAAATTCGTAA+TGG - Chr8:66641835-66641854 None:intergenic 20.0%
!!! AATGTTAAATTTAGAATGGA+AGG - Chr8:66640940-66640959 None:intergenic 20.0%
!!! AATTGTTTATATTTTCAGCA+TGG + Chr8:66642830-66642849 MsG0880045932.01.T01:intron 20.0%
!!! ATAAATTCGTAATGGATTAA+TGG - Chr8:66641827-66641846 None:intergenic 20.0%
!!! GTTGTTTTAATAAGCTATAT+TGG - Chr8:66643962-66643981 None:intergenic 20.0%
!!! TAAATTCGTAATGGATTAAT+GGG - Chr8:66641826-66641845 None:intergenic 20.0%
!!! TGTTGAATTTGTTAACATAT+GGG + Chr8:66641057-66641076 MsG0880045932.01.T01:intron 20.0%
!!! TTGCTCTAAAAAAATTACAA+GGG + Chr8:66641747-66641766 MsG0880045932.01.T01:intron 20.0%
!!! TTGTTGAATTTGTTAACATA+TGG + Chr8:66641056-66641075 MsG0880045932.01.T01:intron 20.0%
!!! TTTGCTCTAAAAAAATTACA+AGG + Chr8:66641746-66641765 MsG0880045932.01.T01:intron 20.0%
!!! TTTTAGAGCAAATAGAAAAA+CGG - Chr8:66641738-66641757 None:intergenic 20.0%
! AAAGATGAGAGAGTAATAAA+TGG + Chr8:66644139-66644158 MsG0880045932.01.T01:intron 25.0%
! AAATATTTCAAAACAGTTCC+TGG - Chr8:66644717-66644736 None:intergenic 25.0%
! AAATTCCAACATAGAGATTT+AGG - Chr8:66644387-66644406 None:intergenic 25.0%
! AATAAGTTGTTTATCCAAAC+AGG + Chr8:66644360-66644379 MsG0880045932.01.T01:intron 25.0%
! AATTCCAACATAGAGATTTA+GGG - Chr8:66644386-66644405 None:intergenic 25.0%
! AATTGTCAATAACAGAGATA+GGG + Chr8:66642781-66642800 MsG0880045932.01.T01:intron 25.0%
! AGAGAGTAATAAATGGTTAA+GGG + Chr8:66644146-66644165 MsG0880045932.01.T01:intron 25.0%
! AGTAAAATTGTATCACAAAC+TGG + Chr8:66643623-66643642 MsG0880045932.01.T01:intron 25.0%
! ATAAAGAATTATGTTACCAC+CGG - Chr8:66643445-66643464 None:intergenic 25.0%
! ATAGTTACACAAAGTATGTA+AGG - Chr8:66642707-66642726 None:intergenic 25.0%
! ATGAAGAAGTAAGAAAATCA+AGG + Chr8:66645129-66645148 MsG0880045932.01.T01:CDS 25.0%
! ATTAATATCAAACAGTTGCA+AGG + Chr8:66642890-66642909 MsG0880045932.01.T01:CDS 25.0%
! CAGTTATTCATGGTAAAAAT+TGG + Chr8:66640252-66640271 MsG0880045932.01.T01:intron 25.0%
! CATAATTATGTACTTCTCAT+CGG + Chr8:66642501-66642520 MsG0880045932.01.T01:intron 25.0%
! CCTAATTGTAGTAATTTGAA+AGG - Chr8:66640539-66640558 None:intergenic 25.0%
! CCTTTCAAATTACTACAATT+AGG + Chr8:66640536-66640555 MsG0880045932.01.T01:intron 25.0%
! CTTAACTCTATTAACTTTAG+AGG + Chr8:66641397-66641416 MsG0880045932.01.T01:intron 25.0%
! CTTTCGAAGCTTAAATTAAA+TGG - Chr8:66640467-66640486 None:intergenic 25.0%
! CTTTCTCATACCATTTATTA+AGG - Chr8:66644104-66644123 None:intergenic 25.0%
! GAGGAGAAAGAATTAAATTA+TGG - Chr8:66643186-66643205 None:intergenic 25.0%
! TAATTGTCAATAACAGAGAT+AGG + Chr8:66642780-66642799 MsG0880045932.01.T01:intron 25.0%
! TAGAGGACATATCTTAAAAA+TGG + Chr8:66640649-66640668 MsG0880045932.01.T01:intron 25.0%
! TCAATAGATAAGCTCAAATA+AGG - Chr8:66643849-66643868 None:intergenic 25.0%
! TGACATAAGAACTAATATGT+AGG - Chr8:66644684-66644703 None:intergenic 25.0%
! TGGTAGAAGAATTGAAAAAA+GGG - Chr8:66645298-66645317 None:intergenic 25.0%
! TTAGATCACATGAAAAACTA+AGG - Chr8:66644471-66644490 None:intergenic 25.0%
! TTTATATGACACACTCAATT+AGG + Chr8:66641331-66641350 MsG0880045932.01.T01:intron 25.0%
!! AAAACATCATAACGTCATTT+TGG + Chr8:66641452-66641471 MsG0880045932.01.T01:intron 25.0%
!! AAATCTGGTTTGTATATTTG+TGG + Chr8:66642974-66642993 MsG0880045932.01.T01:intron 25.0%
!! AATTTTGTATTTACATGTGC+AGG + Chr8:66644998-66645017 MsG0880045932.01.T01:intron 25.0%
!! ACTATTTAAGAGTATGCAAT+TGG + Chr8:66644752-66644771 MsG0880045932.01.T01:intron 25.0%
!! AGCTTATTTGTTGAATTGTT+CGG + Chr8:66645530-66645549 MsG0880045932.01.T01:three_prime_UTR 25.0%
!! GTAACAACATCTTAATTTGA+AGG - Chr8:66644939-66644958 None:intergenic 25.0%
!! TAAATGGTTAAGGGTATAAT+AGG + Chr8:66644155-66644174 MsG0880045932.01.T01:intron 25.0%
!! TAATACATCTTCTCAGTTTT+AGG - Chr8:66642460-66642479 None:intergenic 25.0%
!! TCTCAAATTATAAGTCGTTT+TGG - Chr8:66644245-66644264 None:intergenic 25.0%
!! TTAAATTTAGAATGGAAGGA+AGG - Chr8:66640936-66640955 None:intergenic 25.0%
!! TTTCAAGTCATAGAATAAGT+GGG - Chr8:66643718-66643737 None:intergenic 25.0%
!!! AAATAACTTATTTTCCCCAT+TGG - Chr8:66645328-66645347 None:intergenic 25.0%
!!! AATAACTTATTTTCCCCATT+GGG - Chr8:66645327-66645346 None:intergenic 25.0%
!!! AATTTGTTAACATATGGGAT+TGG + Chr8:66641062-66641081 MsG0880045932.01.T01:intron 25.0%
!!! ATAAGTTTTGTGAGATTGTT+TGG + Chr8:66643870-66643889 MsG0880045932.01.T01:intron 25.0%
!!! CATAAATTTTGACTATGTCA+AGG + Chr8:66640837-66640856 MsG0880045932.01.T01:intron 25.0%
!!! CTCAAATTATAAGTCGTTTT+GGG - Chr8:66644244-66644263 None:intergenic 25.0%
!!! CTCCATTTTATTTTGTATTG+TGG + Chr8:66641671-66641690 MsG0880045932.01.T01:intron 25.0%
!!! TAAGTTTTGTGAGATTGTTT+GGG + Chr8:66643871-66643890 MsG0880045932.01.T01:intron 25.0%
!!! TATTTTTGCACTGATACTAA+AGG + Chr8:66643810-66643829 MsG0880045932.01.T01:intron 25.0%
!!! TCAAATTATAAGTCGTTTTG+GGG - Chr8:66644243-66644262 None:intergenic 25.0%
!!! TTTTGAGTATGGAAAAAATC+TGG + Chr8:66642959-66642978 MsG0880045932.01.T01:CDS 25.0%
AAAATTGGGTATTATGTGAC+AGG + Chr8:66640267-66640286 MsG0880045932.01.T01:intron 30.0%
AAACGACTTATAATTTGGGA+CGG - Chr8:66644003-66644022 None:intergenic 30.0%
AAACTTGTAAATGCAAGCTA+AGG - Chr8:66642031-66642050 None:intergenic 30.0%
AAACTTTACACACATACCTT+AGG - Chr8:66642217-66642236 None:intergenic 30.0%
AACATATGGGATTGGATTAA+TGG + Chr8:66641070-66641089 MsG0880045932.01.T01:intron 30.0%
AACATTCCTGTATAAAGAAG+AGG - Chr8:66642067-66642086 None:intergenic 30.0%
AACCTATATAGATAAACGTG+TGG - Chr8:66641540-66641559 None:intergenic 30.0%
AAGTACACAGGAAAAGAAAA+TGG - Chr8:66642676-66642695 None:intergenic 30.0%
AATATGTACCAGCAAAATCA+TGG - Chr8:66644790-66644809 None:intergenic 30.0%
ACACATATACTGTCACATTA+CGG + Chr8:66642283-66642302 MsG0880045932.01.T01:intron 30.0%
ACATAATTATGTGCACATCA+AGG - Chr8:66642492-66642511 None:intergenic 30.0%
ACATGTAACAAGCTTCTATT+TGG - Chr8:66640219-66640238 None:intergenic 30.0%
AGAAATGAAACTAAGTGTTC+TGG + Chr8:66643082-66643101 MsG0880045932.01.T01:intron 30.0%
AGGTTTCTCTATAAAATTCC+TGG + Chr8:66642736-66642755 MsG0880045932.01.T01:intron 30.0%
AGTCAGCAATTGAATAACAA+TGG - Chr8:66641698-66641717 None:intergenic 30.0%
ATGCATGCATACATATACAT+AGG - Chr8:66644840-66644859 None:intergenic 30.0%
ATGTGCAATATTCTTACTGT+GGG - Chr8:66640358-66640377 None:intergenic 30.0%
CATTACAAGAACAAAATGAC+AGG + Chr8:66645181-66645200 MsG0880045932.01.T01:exon 30.0%
CTGAGTATTTCTTCAAAATG+GGG + Chr8:66640311-66640330 MsG0880045932.01.T01:CDS 30.0%
GAAATGAAACTAAGTGTTCT+GGG + Chr8:66643083-66643102 MsG0880045932.01.T01:intron 30.0%
GAGAGAGTAATAAATGGTTA+AGG + Chr8:66644145-66644164 MsG0880045932.01.T01:intron 30.0%
GCATAGAAATCAGTTATTCA+TGG + Chr8:66640242-66640261 MsG0880045932.01.T01:intron 30.0%
GCCAAAACGACTTATAATTT+GGG - Chr8:66644007-66644026 None:intergenic 30.0%
GCTGAGTATTTCTTCAAAAT+GGG + Chr8:66640310-66640329 MsG0880045932.01.T01:CDS 30.0%
GCTGATGAACTATCATTTAT+TGG + Chr8:66640112-66640131 MsG0880045932.01.T01:CDS 30.0%
GGCCACAATACAAAATAAAA+TGG - Chr8:66641676-66641695 None:intergenic 30.0%
GGTAGAAGAATTGAAAAAAG+GGG - Chr8:66645297-66645316 None:intergenic 30.0%
GGTTCATTAAACTTTGTAGT+GGG + Chr8:66642190-66642209 MsG0880045932.01.T01:CDS 30.0%
GGTTTCTCTATAAAATTCCT+GGG + Chr8:66642737-66642756 MsG0880045932.01.T01:intron 30.0%
GTACAAACTGAAATGATACT+TGG + Chr8:66645446-66645465 MsG0880045932.01.T01:three_prime_UTR 30.0%
GTACATGTTATACATGTTTC+TGG + Chr8:66643157-66643176 MsG0880045932.01.T01:intron 30.0%
GTCAGCAATTGAATAACAAT+GGG - Chr8:66641697-66641716 None:intergenic 30.0%
GTCCATATAACATTATTGCA+GGG + Chr8:66644528-66644547 MsG0880045932.01.T01:intron 30.0%
GTGGTAGAAGAATTGAAAAA+AGG - Chr8:66645299-66645318 None:intergenic 30.0%
GTTTATACTAATCTATGACC+TGG + Chr8:66644506-66644525 MsG0880045932.01.T01:intron 30.0%
TACCACACGTTTATCTATAT+AGG + Chr8:66641535-66641554 MsG0880045932.01.T01:intron 30.0%
TATCTGAGTAAGTTCTACAA+GGG - Chr8:66645159-66645178 None:intergenic 30.0%
TCTCTCACAGTAAAAATCTA+CGG + Chr8:66645255-66645274 MsG0880045932.01.T01:three_prime_UTR 30.0%
TGAGTATTTCTTCAAAATGG+GGG + Chr8:66640312-66640331 MsG0880045932.01.T01:CDS 30.0%
TGCTGAGTATTTCTTCAAAA+TGG + Chr8:66640309-66640328 MsG0880045932.01.T01:CDS 30.0%
TGGATCTTCAGTCTATAATA+TGG + Chr8:66642994-66643013 MsG0880045932.01.T01:intron 30.0%
TGGTTCATTAAACTTTGTAG+TGG + Chr8:66642189-66642208 MsG0880045932.01.T01:CDS 30.0%
TTAGAAATGAAACGAACAGT+AGG - Chr8:66642809-66642828 None:intergenic 30.0%
TTCCCTGCAATAATGTTATA+TGG - Chr8:66644533-66644552 None:intergenic 30.0%
TTGTAGATCATCTTGTAACA+GGG + Chr8:66642574-66642593 MsG0880045932.01.T01:CDS 30.0%
! AAATTTCTAAAGGACTGACA+TGG - Chr8:66641243-66641262 None:intergenic 30.0%
! CTATTAACTTTAGAGGTCAA+TGG + Chr8:66641404-66641423 MsG0880045932.01.T01:intron 30.0%
! GTTTCAAGTCATAGAATAAG+TGG - Chr8:66643719-66643738 None:intergenic 30.0%
! TCACATAGTTCTGTGAAATA+TGG + Chr8:66640611-66640630 MsG0880045932.01.T01:intron 30.0%
! TCATGACATCTTTTTGAACT+TGG + Chr8:66640513-66640532 MsG0880045932.01.T01:intron 30.0%
! TCCCAAATTATAAGTCGTTT+TGG + Chr8:66644003-66644022 MsG0880045932.01.T01:intron 30.0%
! TCGTTTAGTAGAACTGTTTT+TGG - Chr8:66643655-66643674 None:intergenic 30.0%
! TCTATAAAATTCCTGGGTTT+TGG + Chr8:66642743-66642762 MsG0880045932.01.T01:intron 30.0%
! TTTTGGATGGACATTATCTA+CGG + Chr8:66643496-66643515 MsG0880045932.01.T01:intron 30.0%
!! ATAACTTATTTTCCCCATTG+GGG - Chr8:66645326-66645345 None:intergenic 30.0%
!! CGTTTAGTAGAACTGTTTTT+GGG - Chr8:66643654-66643673 None:intergenic 30.0%
!! CTTAGAAGTGTTTACAGATA+TGG - Chr8:66644869-66644888 None:intergenic 30.0%
!! GGGGAAAATAAGTTATTTCT+AGG + Chr8:66645330-66645349 MsG0880045932.01.T01:three_prime_UTR 30.0%
!! TTTTCAAGCTATGTTGACAA+TGG + Chr8:66641574-66641593 MsG0880045932.01.T01:intron 30.0%
!! TTTTGACTATGTCAAGGATA+AGG + Chr8:66640843-66640862 MsG0880045932.01.T01:intron 30.0%
!! TTTTGGCATTATTTTGTCTC+AGG + Chr8:66642111-66642130 MsG0880045932.01.T01:intron 30.0%
ACAAGAACAAAATGACAGGA+AGG + Chr8:66645185-66645204 MsG0880045932.01.T01:exon 35.0%
ACAAGGAGATACTACTAGTT+TGG + Chr8:66640676-66640695 MsG0880045932.01.T01:intron 35.0%
ACACAAAGTATGTAAGGTGA+AGG - Chr8:66642701-66642720 None:intergenic 35.0%
ACACAACCTTGCTAATTCAT+TGG + Chr8:66641850-66641869 MsG0880045932.01.T01:intron 35.0%
ACCAATAATAGACCCACAAT+GGG - Chr8:66642006-66642025 None:intergenic 35.0%
AGCTCCAATATTGTTTGCAA+TGG + Chr8:66644560-66644579 MsG0880045932.01.T01:CDS 35.0%
ATAGATAAACGTGTGGTACA+TGG - Chr8:66641533-66641552 None:intergenic 35.0%
ATATACTGTCACATTACGGT+GGG + Chr8:66642287-66642306 MsG0880045932.01.T01:intron 35.0%
ATATGACACACTCAATTAGG+AGG + Chr8:66641334-66641353 MsG0880045932.01.T01:intron 35.0%
ATTTCAATTGAAGACCCCAA+GGG - Chr8:66643531-66643550 None:intergenic 35.0%
CATGTAGGTTGTATCTTTGT+TGG + Chr8:66642545-66642564 MsG0880045932.01.T01:intron 35.0%
CGCCAAAACGACTTATAATT+TGG - Chr8:66644008-66644027 None:intergenic 35.0%
CTATCTGAGTAAGTTCTACA+AGG - Chr8:66645160-66645179 None:intergenic 35.0%
CTGAAACCTCTTCTTTATAC+AGG + Chr8:66642058-66642077 MsG0880045932.01.T01:intron 35.0%
CTTACAATGTTAACGTTCTC+GGG - Chr8:66644633-66644652 None:intergenic 35.0%
GATGTGCAATATTCTTACTG+TGG - Chr8:66640359-66640378 None:intergenic 35.0%
GCAATAATGTTATATGGACC+AGG - Chr8:66644527-66644546 None:intergenic 35.0%
GCTTACAATGTTAACGTTCT+CGG - Chr8:66644634-66644653 None:intergenic 35.0%
GGTCCATATAACATTATTGC+AGG + Chr8:66644527-66644546 MsG0880045932.01.T01:intron 35.0%
GTTAAGCCAATGAATTAGCA+AGG - Chr8:66641859-66641878 None:intergenic 35.0%
GTTGTAGATCATCTTGTAAC+AGG + Chr8:66642573-66642592 MsG0880045932.01.T01:CDS 35.0%
TACCAATAATAGACCCACAA+TGG - Chr8:66642007-66642026 None:intergenic 35.0%
TAGTTACTGAGGTATATCAC+TGG + Chr8:66640155-66640174 MsG0880045932.01.T01:intron 35.0%
TATGGGATTGGATTAATGGA+TGG + Chr8:66641074-66641093 MsG0880045932.01.T01:intron 35.0%
TCAACTGGAAAACAATATGC+AGG - Chr8:66642251-66642270 None:intergenic 35.0%
TCCAATATTGTTTGCAATGG+AGG + Chr8:66644563-66644582 MsG0880045932.01.T01:CDS 35.0%
TCCTCCATTGCAAACAATAT+TGG - Chr8:66644567-66644586 None:intergenic 35.0%
TGACTTCAACATCTGATCAA+CGG + Chr8:66642610-66642629 MsG0880045932.01.T01:CDS 35.0%
TGAGCGTGCATATAGATATT+AGG + Chr8:66640981-66641000 MsG0880045932.01.T01:intron 35.0%
TGATAAAGAACCCTTTCCAA+GGG - Chr8:66643274-66643293 None:intergenic 35.0%
TGGAATTTGAAAACCCTTCT+CGG + Chr8:66644399-66644418 MsG0880045932.01.T01:intron 35.0%
TGTAGATCATCTTGTAACAG+GGG + Chr8:66642575-66642594 MsG0880045932.01.T01:CDS 35.0%
TGTATAGAAACACAGTCCTT+CGG - Chr8:66642527-66642546 None:intergenic 35.0%
TGTGTAACTATCAACGAGTA+AGG + Chr8:66642716-66642735 MsG0880045932.01.T01:intron 35.0%
TTACAATGTTAACGTTCTCG+GGG - Chr8:66644632-66644651 None:intergenic 35.0%
TTTCAAAACAGTTCCTGGTT+TGG - Chr8:66644712-66644731 None:intergenic 35.0%
TTTGGATGGACATTATCTAC+GGG + Chr8:66643497-66643516 MsG0880045932.01.T01:intron 35.0%
TTTGTTGCAGTTGTCAGTAT+TGG + Chr8:66642342-66642361 MsG0880045932.01.T01:intron 35.0%
! ACTGATACTAAAGGCTTGTT+TGG + Chr8:66643819-66643838 MsG0880045932.01.T01:intron 35.0%
! AGCTAAATCCATGATTTTGC+TGG + Chr8:66644779-66644798 MsG0880045932.01.T01:intron 35.0%
! CCTTTGTCTTTTGTATACCT+CGG - Chr8:66645046-66645065 None:intergenic 35.0%
! CTGTGTTCATTCATGCTTTT+TGG + Chr8:66643479-66643498 MsG0880045932.01.T01:intron 35.0%
! GACTGTGTTTCTATACATGT+AGG + Chr8:66642530-66642549 MsG0880045932.01.T01:intron 35.0%
! GATGATGTGCTTGATTTTAC+AGG + Chr8:66643237-66643256 MsG0880045932.01.T01:CDS 35.0%
! TAACTTTAGAGGTCAATGGT+TGG + Chr8:66641408-66641427 MsG0880045932.01.T01:intron 35.0%
! TACCTCAGTGTTCTTTAAAG+AGG - Chr8:66642407-66642426 None:intergenic 35.0%
! TTTTACTATCTTGAGCACCA+AGG - Chr8:66643406-66643425 None:intergenic 35.0%
! TTTTCTCCTCTCGTATTTCT+GGG + Chr8:66640900-66640919 MsG0880045932.01.T01:intron 35.0%
! TTTTTCTCCTCTCGTATTTC+TGG + Chr8:66640899-66640918 MsG0880045932.01.T01:intron 35.0%
!! ACTTCTTCATCGTCATTTTC+AGG - Chr8:66645119-66645138 None:intergenic 35.0%
!! GTTCATTCATGCTTTTTGGA+TGG + Chr8:66643483-66643502 MsG0880045932.01.T01:intron 35.0%
!!! TAATGGATGGTTGTTTTTGC+AGG + Chr8:66641087-66641106 MsG0880045932.01.T01:intron 35.0%
!!! TTCATCGTCATTTTCAGGTA+AGG - Chr8:66645114-66645133 None:intergenic 35.0%
AAACATGATATGTTCCCTGC+CGG + Chr8:66643423-66643442 MsG0880045932.01.T01:intron 40.0%
AAGATATCAACCGAACCCAA+TGG - Chr8:66643119-66643138 None:intergenic 40.0%
AAGGTGAAGGATAAGTACAC+AGG - Chr8:66642688-66642707 None:intergenic 40.0%
AATCAATTGCTTCTGCTGCA+AGG - Chr8:66645091-66645110 None:intergenic 40.0%
ACCCATTGTGGGTCTATTAT+TGG + Chr8:66642002-66642021 MsG0880045932.01.T01:intron 40.0%
AGCATGAATGAACACAGACA+TGG - Chr8:66643476-66643495 None:intergenic 40.0%
AGTCTTCCACTACTTCACTT+CGG - Chr8:66645500-66645519 None:intergenic 40.0%
CAACTTCACCTAGTTGGATA+AGG + Chr8:66641485-66641504 MsG0880045932.01.T01:intron 40.0%
CAATCATGCCTTATCCAACT+AGG - Chr8:66641496-66641515 None:intergenic 40.0%
CATATACTGTCACATTACGG+TGG + Chr8:66642286-66642305 MsG0880045932.01.T01:intron 40.0%
CCAATACGTCATCATGAAGA+AGG - Chr8:66642144-66642163 None:intergenic 40.0%
CCATGCTACTAATAGCTCAA+AGG - Chr8:66641881-66641900 None:intergenic 40.0%
CCGAGGTATACAAAAGACAA+AGG + Chr8:66645043-66645062 MsG0880045932.01.T01:CDS 40.0%
CCTTTGAGCTATTAGTAGCA+TGG + Chr8:66641878-66641897 MsG0880045932.01.T01:intron 40.0%
CTGAGCATATTGAAGAGCAA+AGG - Chr8:66640590-66640609 None:intergenic 40.0%
CTGATAAAGAACCCTTTCCA+AGG - Chr8:66643275-66643294 None:intergenic 40.0%
CTTATCCAACTAGGTGAAGT+TGG - Chr8:66641487-66641506 None:intergenic 40.0%
GAGATTGTTTGGGAGAACTT+AGG + Chr8:66643881-66643900 MsG0880045932.01.T01:intron 40.0%
GATTTCAATTGAAGACCCCA+AGG - Chr8:66643532-66643551 None:intergenic 40.0%
GGAATTTGAAAACCCTTCTC+GGG + Chr8:66644400-66644419 MsG0880045932.01.T01:intron 40.0%
GGTCATTGACACAACATTAG+AGG + Chr8:66640632-66640651 MsG0880045932.01.T01:intron 40.0%
GTATTACAGAAACCCGAGAA+GGG - Chr8:66644415-66644434 None:intergenic 40.0%
GTATTTACATGTGCAGGCTT+TGG + Chr8:66645004-66645023 MsG0880045932.01.T01:intron 40.0%
GTATTTCTTCAAAATGGGGG+TGG + Chr8:66640315-66640334 MsG0880045932.01.T01:CDS 40.0%
GTTGAAAGCCTTTGAATCCT+TGG + Chr8:66643386-66643405 MsG0880045932.01.T01:intron 40.0%
TAATGAACCAATACCACGTC+TGG - Chr8:66642179-66642198 None:intergenic 40.0%
TATGGTGTCTGTGTTTGTGT+CGG + Chr8:66640809-66640828 MsG0880045932.01.T01:intron 40.0%
TATGTAGGATACATGCAACC+AGG - Chr8:66644669-66644688 None:intergenic 40.0%
TCGGGTTTCTGTAATACAAC+TGG + Chr8:66644418-66644437 MsG0880045932.01.T01:intron 40.0%
TCTATACCTTCCATTGGGTT+CGG + Chr8:66643106-66643125 MsG0880045932.01.T01:intron 40.0%
TGTAAACAGCAGTGATCAAC+TGG - Chr8:66642266-66642285 None:intergenic 40.0%
TGTAACCAACTTCACCTAGT+TGG + Chr8:66641479-66641498 MsG0880045932.01.T01:intron 40.0%
TGTATTACAGAAACCCGAGA+AGG - Chr8:66644416-66644435 None:intergenic 40.0%
TTATTTGCAGCTTACAGCAC+AGG - Chr8:66644345-66644364 None:intergenic 40.0%
TTTCAATTGAAGACCCCAAG+GGG - Chr8:66643530-66643549 None:intergenic 40.0%
! AAACTTTGTAGTGGGACCTA+AGG + Chr8:66642198-66642217 MsG0880045932.01.T01:CDS 40.0%
! ACGCCATATACTAGAAGTGT+CGG - Chr8:66640714-66640733 None:intergenic 40.0%
! ACTAGGTGAAGTTGGTTACA+TGG - Chr8:66641479-66641498 None:intergenic 40.0%
! ACTTGATCCATTTTCTCTGG+TGG + Chr8:66640090-66640109 MsG0880045932.01.T01:CDS 40.0%
! ATAGAGATTTAGGGCCTGTT+TGG - Chr8:66644377-66644396 None:intergenic 40.0%
! CCAGAGACTTGCCTTTAAAA+GGG + Chr8:66641928-66641947 MsG0880045932.01.T01:intron 40.0%
! CCTTCTTCATGATGACGTAT+TGG + Chr8:66642141-66642160 MsG0880045932.01.T01:CDS 40.0%
! CGAACTTGATCCATTTTCTC+TGG + Chr8:66640087-66640106 MsG0880045932.01.T01:CDS 40.0%
! GACTTATAATTTGGGACGGA+GGG - Chr8:66643999-66644018 None:intergenic 40.0%
! GTAAGCTAACAAGTTTTGCC+TGG + Chr8:66644648-66644667 MsG0880045932.01.T01:intron 40.0%
! TCTTTCTCCTCTGTTTTGCA+GGG + Chr8:66643195-66643214 MsG0880045932.01.T01:intron 40.0%
! TTATGTCACTTCACCAAACC+AGG + Chr8:66644696-66644715 MsG0880045932.01.T01:intron 40.0%
! TTATTTTCCCCATTGGGGAA+CGG - Chr8:66645321-66645340 None:intergenic 40.0%
! TTCTTTCTCCTCTGTTTTGC+AGG + Chr8:66643194-66643213 MsG0880045932.01.T01:intron 40.0%
! TTGCCTTTAAAAGGGAAACC+CGG + Chr8:66641936-66641955 MsG0880045932.01.T01:intron 40.0%
! TTTCTCCTCTCGTATTTCTG+GGG + Chr8:66640901-66640920 MsG0880045932.01.T01:intron 40.0%
!! AGCTTGCTTGAGGTTTTCTT+GGG + Chr8:66642313-66642332 MsG0880045932.01.T01:intron 40.0%
!! TGCAGGCTTTGGATTATCTT+GGG + Chr8:66645015-66645034 MsG0880045932.01.T01:intron 40.0%
!! TGGCATTATTTTGTCTCAGG+TGG + Chr8:66642114-66642133 MsG0880045932.01.T01:intron 40.0%
!!! TAGCTTGCTTGAGGTTTTCT+TGG + Chr8:66642312-66642331 MsG0880045932.01.T01:intron 40.0%
ACAAACGACACACTGACAGA+GGG - Chr8:66645428-66645447 None:intergenic 45.0%
ACAAAGCTCTCTCCGTGTTA+GGG + Chr8:66641963-66641982 MsG0880045932.01.T01:intron 45.0%
ACATCAGCTTCCCTTGGAAA+GGG + Chr8:66643261-66643280 MsG0880045932.01.T01:CDS 45.0%
AGAATTATGTTACCACCGGC+AGG - Chr8:66643441-66643460 None:intergenic 45.0%
ATCACGTTGTTGTGTCGTGT+CGG - Chr8:66640745-66640764 None:intergenic 45.0%
ATCATTACCAGCGTCGTGTA+TGG + Chr8:66640791-66640810 MsG0880045932.01.T01:intron 45.0%
ATGCAAATGTCAACCCATGC+AGG - Chr8:66640408-66640427 None:intergenic 45.0%
CAACATCTGATCAACGGTGT+AGG + Chr8:66642616-66642635 MsG0880045932.01.T01:CDS 45.0%
CAGGCCCTAAATCTCTATGT+TGG + Chr8:66644379-66644398 MsG0880045932.01.T01:intron 45.0%
CCGGGAAAGCAAAAAATCAC+CGG - Chr8:66642368-66642387 None:intergenic 45.0%
CTGGGTCTATACCTTCCATT+GGG + Chr8:66643101-66643120 MsG0880045932.01.T01:intron 45.0%
CTTGAGCACCAAGGATTCAA+AGG - Chr8:66643397-66643416 None:intergenic 45.0%
GAAGAAATACTCAGCAGCTG+AGG - Chr8:66640305-66640324 None:intergenic 45.0%
GAATTATGTTACCACCGGCA+GGG - Chr8:66643440-66643459 None:intergenic 45.0%
GATTATCTTGGGAAAAGCCG+AGG + Chr8:66645026-66645045 MsG0880045932.01.T01:CDS 45.0%
GCCAGAGACTTGCCTTTAAA+AGG + Chr8:66641927-66641946 MsG0880045932.01.T01:intron 45.0%
GCGAGAAATGGTAGTTACTG+AGG + Chr8:66640144-66640163 MsG0880045932.01.T01:CDS 45.0%
GTACATCCGAAGTGAAGTAG+TGG + Chr8:66645491-66645510 MsG0880045932.01.T01:three_prime_UTR 45.0%
TACAAACGACACACTGACAG+AGG - Chr8:66645429-66645448 None:intergenic 45.0%
TACAAAGCTCTCTCCGTGTT+AGG + Chr8:66641962-66641981 MsG0880045932.01.T01:intron 45.0%
TATCAACCGAACCCAATGGA+AGG - Chr8:66643115-66643134 None:intergenic 45.0%
TCATCAGCCACCAGAGAAAA+TGG - Chr8:66640100-66640119 None:intergenic 45.0%
TCTGGGTCTATACCTTCCAT+TGG + Chr8:66643100-66643119 MsG0880045932.01.T01:intron 45.0%
TGCAAGGTTAGCATGCTTCA+CGG - Chr8:66645075-66645094 None:intergenic 45.0%
TGCGTTGTTGTCTTGAACGT+AGG - Chr8:66641198-66641217 None:intergenic 45.0%
TGGTAACAAGCTGCGAGAAA+TGG + Chr8:66640132-66640151 MsG0880045932.01.T01:CDS 45.0%
TTCCACAATTGCACGCAACT+GGG - Chr8:66644595-66644614 None:intergenic 45.0%
TTCTTCAAAATGGGGGTGGA+AGG + Chr8:66640319-66640338 MsG0880045932.01.T01:CDS 45.0%
TTGCGTGCAATTGTGGAAGA+GGG + Chr8:66644597-66644616 MsG0880045932.01.T01:CDS 45.0%
! CGACTTATAATTTGGGACGG+AGG - Chr8:66644000-66644019 None:intergenic 45.0%
! GCACCGACACTTCTAGTATA+TGG + Chr8:66640708-66640727 MsG0880045932.01.T01:intron 45.0%
! GCTTTTGTAAGCCAAAACCC+AGG - Chr8:66642757-66642776 None:intergenic 45.0%
! GGCCTCTTTAAAGAACACTG+AGG + Chr8:66642402-66642421 MsG0880045932.01.T01:intron 45.0%
! TCTACGGCGACAATTTGTTC+TGG + Chr8:66645271-66645290 MsG0880045932.01.T01:three_prime_UTR 45.0%
! TGATGACGTATTGGACGATG+CGG + Chr8:66642150-66642169 MsG0880045932.01.T01:CDS 45.0%
!! CCCTTTTAAAGGCAAGTCTC+TGG - Chr8:66641931-66641950 None:intergenic 45.0%
!! GCAGTGCTTGCTTTTGAGTA+TGG + Chr8:66642948-66642967 MsG0880045932.01.T01:CDS 45.0%
!! GGAAGAGTACTACCCATTGT+GGG + Chr8:66641991-66642010 MsG0880045932.01.T01:intron 45.0%
!! GTGCAGGCTTTGGATTATCT+TGG + Chr8:66645014-66645033 MsG0880045932.01.T01:intron 45.0%
!! TTGCAGTTGTCAGTATTGGC+CGG + Chr8:66642346-66642365 MsG0880045932.01.T01:intron 45.0%
!!! CCGGTGATTTTTTGCTTTCC+CGG + Chr8:66642365-66642384 MsG0880045932.01.T01:intron 45.0%
!!! CGCATAGCGGAAAGCTTTTT+TGG - Chr8:66641783-66641802 None:intergenic 45.0%
!!! CGGTGATTTTTTGCTTTCCC+GGG + Chr8:66642366-66642385 MsG0880045932.01.T01:intron 45.0%
!!! ATTATATTACAAAATAATTT+TGG + Chr8:66642094-66642113 MsG0880045932.01.T01:intron 5.0%
AAAGGCAAGTCTCTGGCAGT+TGG - Chr8:66641924-66641943 None:intergenic 50.0%
AAGGCAATAGCCATCCTTGC+AGG + Chr8:66642909-66642928 MsG0880045932.01.T01:CDS 50.0%
AGGCAATAGCCATCCTTGCA+GGG + Chr8:66642910-66642929 MsG0880045932.01.T01:CDS 50.0%
ATGTACTTCTCATCGGCCGA+AGG + Chr8:66642508-66642527 MsG0880045932.01.T01:intron 50.0%
CACATCAGCTTCCCTTGGAA+AGG + Chr8:66643260-66643279 MsG0880045932.01.T01:CDS 50.0%
CTGATCCCCAGAAATACGAG+AGG - Chr8:66640909-66640928 None:intergenic 50.0%
CTTCCACAATTGCACGCAAC+TGG - Chr8:66644596-66644615 None:intergenic 50.0%
GTTGCGTGCAATTGTGGAAG+AGG + Chr8:66644596-66644615 MsG0880045932.01.T01:CDS 50.0%
TCCACAATTGCACGCAACTG+GGG - Chr8:66644594-66644613 None:intergenic 50.0%
TTCTACCACCGTTCCCCAAT+GGG + Chr8:66645310-66645329 MsG0880045932.01.T01:three_prime_UTR 50.0%
TTTCCGCTATGCGTTGTCCA+GGG + Chr8:66641790-66641809 MsG0880045932.01.T01:intron 50.0%
! CATAACAAGGGCACGTGATG+TGG - Chr8:66644969-66644988 None:intergenic 50.0%
! CTCCTCTGTTTTGCAGGGTT+TGG + Chr8:66643200-66643219 MsG0880045932.01.T01:intron 50.0%
! GCACCGGGTTTCCCTTTTAA+AGG - Chr8:66641942-66641961 None:intergenic 50.0%
!! CGGAAGAGTACTACCCATTG+TGG + Chr8:66641990-66642009 MsG0880045932.01.T01:intron 50.0%
!! TAGAAGTGTCGGTGCTACAG+AGG - Chr8:66640703-66640722 None:intergenic 50.0%
!! TCCATTGCAGGAGGTGCTTT+GGG - Chr8:66641151-66641170 None:intergenic 50.0%
ACAGACACCATACACGACGC+TGG - Chr8:66640801-66640820 None:intergenic 55.0%
ACAGGCACATCAGCTTCCCT+TGG + Chr8:66643255-66643274 MsG0880045932.01.T01:CDS 55.0%
AGCTGTTTGCCCTGCAAGGA+TGG - Chr8:66642922-66642941 None:intergenic 55.0%
AGGCCAGAGTAACACAAGCC+CGG - Chr8:66642387-66642406 None:intergenic 55.0%
CATGATATGTTCCCTGCCGG+TGG + Chr8:66643426-66643445 MsG0880045932.01.T01:intron 55.0%
CCACAATTGCACGCAACTGG+GGG - Chr8:66644593-66644612 None:intergenic 55.0%
CGCCAAACCCTGCAAAACAG+AGG - Chr8:66643205-66643224 None:intergenic 55.0%
CTACGGGTAGCTTTCCCCTT+GGG + Chr8:66643513-66643532 MsG0880045932.01.T01:intron 55.0%
CTCTTCCGCAGACCCTAACA+CGG - Chr8:66641978-66641997 None:intergenic 55.0%
CTGGCAGTTGGCACAACAGT+TGG - Chr8:66641912-66641931 None:intergenic 55.0%
CTTCAGCTGTTTGCCCTGCA+AGG - Chr8:66642926-66642945 None:intergenic 55.0%
CTTCCCTGGACAACGCATAG+CGG - Chr8:66641796-66641815 None:intergenic 55.0%
CTTCTACCACCGTTCCCCAA+TGG + Chr8:66645309-66645328 MsG0880045932.01.T01:three_prime_UTR 55.0%
CTTTCCGCTATGCGTTGTCC+AGG + Chr8:66641789-66641808 MsG0880045932.01.T01:intron 55.0%
GCAGAAACGCTTGCCTGCAT+GGG + Chr8:66640392-66640411 MsG0880045932.01.T01:intron 55.0%
GCGGATACCAGACGTGGTAT+TGG + Chr8:66642169-66642188 MsG0880045932.01.T01:CDS 55.0%
GCTATGCGTTGTCCAGGGAA+GGG + Chr8:66641795-66641814 MsG0880045932.01.T01:intron 55.0%
GTACCTCCAAGCTCCATTGC+AGG - Chr8:66641163-66641182 None:intergenic 55.0%
TACGGGTAGCTTTCCCCTTG+GGG + Chr8:66643514-66643533 MsG0880045932.01.T01:intron 55.0%
TCAGCAGCTGAGGCAAGCTT+AGG - Chr8:66640295-66640314 None:intergenic 55.0%
TCTACCACCGTTCCCCAATG+GGG + Chr8:66645311-66645330 MsG0880045932.01.T01:three_prime_UTR 55.0%
TCTACGGGTAGCTTTCCCCT+TGG + Chr8:66643512-66643531 MsG0880045932.01.T01:intron 55.0%
TCTCTCCGTGTTAGGGTCTG+CGG + Chr8:66641970-66641989 MsG0880045932.01.T01:intron 55.0%
TGCAGAAACGCTTGCCTGCA+TGG + Chr8:66640391-66640410 MsG0880045932.01.T01:intron 55.0%
! CGGAGAGAGCTTTGTAGCAC+CGG - Chr8:66641958-66641977 None:intergenic 55.0%
! GGAGAGAGCTTTGTAGCACC+GGG - Chr8:66641957-66641976 None:intergenic 55.0%
! TAATGGGTCCTTCCCTTCCC+TGG - Chr8:66641810-66641829 None:intergenic 55.0%
! TCCCAAAGCACCTCCTGCAA+TGG + Chr8:66641147-66641166 MsG0880045932.01.T01:CDS 55.0%
! TTCCCGGGCTTGTGTTACTC+TGG + Chr8:66642381-66642400 MsG0880045932.01.T01:intron 55.0%
! TTGTTGTGTCGTGTCGGCGT+CGG - Chr8:66640739-66640758 None:intergenic 55.0%
! TTTTCCCCATTGGGGAACGG+TGG - Chr8:66645318-66645337 None:intergenic 55.0%
!! CTCCATTGCAGGAGGTGCTT+TGG - Chr8:66641152-66641171 None:intergenic 55.0%
!! GCAGGAGGTGCTTTGGGAAT+TGG - Chr8:66641145-66641164 None:intergenic 55.0%
CCCCCAGTTGCGTGCAATTG+TGG + Chr8:66644590-66644609 MsG0880045932.01.T01:CDS 60.0%
CCTCCAAGCTCCATTGCAGG+AGG - Chr8:66641160-66641179 None:intergenic 60.0%
CCTCCTGCAATGGAGCTTGG+AGG + Chr8:66641157-66641176 MsG0880045932.01.T01:CDS 60.0%
CGCTATGCGTTGTCCAGGGA+AGG + Chr8:66641794-66641813 MsG0880045932.01.T01:intron 60.0%
GACGATGCGGATACCAGACG+TGG + Chr8:66642163-66642182 MsG0880045932.01.T01:CDS 60.0%
GCACCTCCTGCAATGGAGCT+TGG + Chr8:66641154-66641173 MsG0880045932.01.T01:CDS 60.0%
GGCCAGAGTAACACAAGCCC+GGG - Chr8:66642386-66642405 None:intergenic 60.0%
TGCGTTGTCCAGGGAAGGGA+AGG + Chr8:66641799-66641818 MsG0880045932.01.T01:intron 60.0%
!! CGGTGGGTGTAGCTTGCTTG+AGG + Chr8:66642303-66642322 MsG0880045932.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 66640070 66645567 66640070 ID=MsG0880045932.01;Name=MsG0880045932.01
Chr8 mRNA 66640070 66645567 66640070 ID=MsG0880045932.01.T01;Parent=MsG0880045932.01;Name=MsG0880045932.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0.75|0.77|1|1|1|9|368|319
Chr8 exon 66640070 66640165 66640070 ID=MsG0880045932.01.T01:exon:25289;Parent=MsG0880045932.01.T01
Chr8 exon 66640289 66640360 66640289 ID=MsG0880045932.01.T01:exon:25290;Parent=MsG0880045932.01.T01
Chr8 exon 66641109 66641225 66641109 ID=MsG0880045932.01.T01:exon:25291;Parent=MsG0880045932.01.T01
Chr8 exon 66642133 66642219 66642133 ID=MsG0880045932.01.T01:exon:25292;Parent=MsG0880045932.01.T01
Chr8 exon 66642552 66642637 66642552 ID=MsG0880045932.01.T01:exon:25293;Parent=MsG0880045932.01.T01
Chr8 exon 66642848 66642980 66642848 ID=MsG0880045932.01.T01:exon:25294;Parent=MsG0880045932.01.T01
Chr8 exon 66643216 66643305 66643216 ID=MsG0880045932.01.T01:exon:25295;Parent=MsG0880045932.01.T01
Chr8 exon 66644549 66644647 66644549 ID=MsG0880045932.01.T01:exon:25296;Parent=MsG0880045932.01.T01
Chr8 exon 66645020 66645567 66645020 ID=MsG0880045932.01.T01:exon:25297;Parent=MsG0880045932.01.T01
Chr8 CDS 66640070 66640165 66640070 ID=MsG0880045932.01.T01:cds;Parent=MsG0880045932.01.T01
Chr8 CDS 66640289 66640360 66640289 ID=MsG0880045932.01.T01:cds;Parent=MsG0880045932.01.T01
Chr8 CDS 66641109 66641225 66641109 ID=MsG0880045932.01.T01:cds;Parent=MsG0880045932.01.T01
Chr8 CDS 66642133 66642219 66642133 ID=MsG0880045932.01.T01:cds;Parent=MsG0880045932.01.T01
Chr8 CDS 66642552 66642637 66642552 ID=MsG0880045932.01.T01:cds;Parent=MsG0880045932.01.T01
Chr8 CDS 66642848 66642980 66642848 ID=MsG0880045932.01.T01:cds;Parent=MsG0880045932.01.T01
Chr8 CDS 66643216 66643305 66643216 ID=MsG0880045932.01.T01:cds;Parent=MsG0880045932.01.T01
Chr8 CDS 66644549 66644647 66644549 ID=MsG0880045932.01.T01:cds;Parent=MsG0880045932.01.T01
Chr8 CDS 66645020 66645199 66645020 ID=MsG0880045932.01.T01:cds;Parent=MsG0880045932.01.T01
Chr8 three_prime_UTR 66645200 66645567 66645200 ID=MsG0880045932.01.T01:three_prime_utr;Parent=MsG0880045932.01.T01
Gene Sequence

>MsG0880045932.01.T01

ATGTATTATTTTCAGGACGAACTTGATCCATTTTCTCTGGTGGCTGATGAACTATCATTTATTGGTAACAAGCTGCGAGAAATGGTAGTTACTGAGGTTCCTAAGCTTGCCTCAGCTGCTGAGTATTTCTTCAAAATGGGGGTGGAAGGAAAAAGATTTCGTCCCACAGTTTTATTGTTAATGTCAACAGCATTAAATCTTCCAATTCCCAAAGCACCTCCTGCAATGGAGCTTGGAGGTACTACAACAACTGACCTACGTTCAAGACAACAACGCATAGCTGCAGTGGCAAGCCTTCTTCATGATGACGTATTGGACGATGCGGATACCAGACGTGGTATTGGTTCATTAAACTTTGTAGTGGGACCTAAGGTTGTATCTTTGTTGGCAAATGTTGTAGATCATCTTGTAACAGGGGAGATCATGCAAATGACTTCAACATCTGATCAACGGTGTAGCATGGAATATTATATGAAAAAGACATACTACAAGACTGCATCATTAATATCAAACAGTTGCAAGGCAATAGCCATCCTTGCAGGGCAAACAGCTGAAGTTGCAGTGCTTGCTTTTGAGTATGGAAAAAATCTGGGTTTGGCGTTTCAATTGATAGATGATGTGCTTGATTTTACAGGCACATCAGCTTCCCTTGGAAAGGGTTCTTTATCAGACATTCAACATGGAATCGTTACAGCTCCAATATTGTTTGCAATGGAGGAGTTCCCCCAGTTGCGTGCAATTGTGGAAGAGGGCTTTGAAAACCCCGAGAACGTTAACATTGCTTTGGATTATCTTGGGAAAAGCCGAGGTATACAAAAGACAAAGGAGCTAGCCGTGAAGCATGCTAACCTTGCAGCAGAAGCAATTGATTCCTTACCTGAAAATGACGATGAAGAAGTAAGAAAATCAAGGAAAGCCCTTGTAGAACTTACTCAGATAGTCATTACAAGAACAAAATGA
Protein sequence

>MsG0880045932.01.T01

MYYFQDELDPFSLVADELSFIGNKLREMVVTEVPKLASAAEYFFKMGVEGKRFRPTVLLLMSTALNLPIPKAPPAMELGGTTTTDLRSRQQRIAAVASLLHDDVLDDADTRRGIGSLNFVVGPKVVSLLANVVDHLVTGEIMQMTSTSDQRCSMEYYMKKTYYKTASLISNSCKAIAILAGQTAEVAVLAFEYGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIQHGIVTAPILFAMEEFPQLRAIVEEGFENPENVNIALDYLGKSRGIQKTKELAVKHANLAAEAIDSLPENDDEEVRKSRKALVELTQIVITRTK*