Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046282.01.T01 | XP_013457735.1 | 98.083 | 313 | 5 | 1 | 1 | 313 | 1 | 312 | 0 | 631 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046282.01.T01 | A0A072UQY7 | 98.083 | 313 | 5 | 1 | 1 | 313 | 1 | 312 | 0.0 | 631 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0680035339.01 | MsG0880046282.01 | 0.800198 | 1.612626e-48 | 7.463031e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046282.01.T01 | MTR_4g104760 | 98.083 | 313 | 5 | 1 | 1 | 313 | 1 | 312 | 0.0 | 631 |
| MsG0880046282.01.T01 | MTR_3g076610 | 71.182 | 347 | 58 | 8 | 1 | 313 | 1 | 339 | 9.71e-172 | 479 |
| MsG0880046282.01.T01 | MTR_5g069570 | 47.119 | 295 | 134 | 5 | 26 | 313 | 30 | 309 | 2.45e-89 | 269 |
| MsG0880046282.01.T01 | MTR_3g082430 | 44.558 | 294 | 145 | 6 | 26 | 313 | 12 | 293 | 1.35e-80 | 246 |
| MsG0880046282.01.T01 | MTR_5g096570 | 40.984 | 305 | 161 | 5 | 13 | 313 | 1173 | 1462 | 1.71e-64 | 220 |
| MsG0880046282.01.T01 | MTR_7g095100 | 38.305 | 295 | 160 | 6 | 27 | 313 | 27 | 307 | 3.35e-62 | 200 |
| MsG0880046282.01.T01 | MTR_1g081260 | 34.069 | 317 | 182 | 7 | 7 | 313 | 4 | 303 | 2.45e-59 | 192 |
| MsG0880046282.01.T01 | MTR_7g114790 | 35.220 | 318 | 176 | 9 | 7 | 311 | 4 | 304 | 1.38e-58 | 190 |
| MsG0880046282.01.T01 | MTR_5g069550 | 41.414 | 198 | 96 | 5 | 4 | 199 | 10 | 189 | 6.10e-43 | 146 |
| MsG0880046282.01.T01 | MTR_2g084965 | 33.333 | 249 | 152 | 6 | 24 | 267 | 35 | 274 | 3.85e-41 | 145 |
| MsG0880046282.01.T01 | MTR_4g055230 | 32.824 | 262 | 156 | 7 | 9 | 267 | 27 | 271 | 1.17e-39 | 141 |
| MsG0880046282.01.T01 | MTR_3g106250 | 30.357 | 280 | 151 | 9 | 7 | 267 | 6 | 260 | 4.17e-37 | 135 |
| MsG0880046282.01.T01 | MTR_1g013100 | 31.915 | 282 | 148 | 13 | 4 | 267 | 5 | 260 | 1.45e-33 | 125 |
| MsG0880046282.01.T01 | MTR_7g103900 | 28.444 | 225 | 150 | 3 | 47 | 267 | 56 | 273 | 4.23e-28 | 110 |
| MsG0880046282.01.T01 | MTR_7g103900 | 28.767 | 146 | 103 | 1 | 47 | 191 | 56 | 201 | 4.04e-14 | 70.9 |
| MsG0880046282.01.T01 | MTR_5g069590 | 34.375 | 96 | 35 | 2 | 95 | 190 | 26 | 93 | 2.31e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046282.01.T01 | AT4G12690 | 47.855 | 303 | 132 | 6 | 12 | 313 | 8 | 285 | 6.04e-92 | 275 |
| MsG0880046282.01.T01 | AT4G12690 | 47.855 | 303 | 132 | 6 | 12 | 313 | 8 | 285 | 6.04e-92 | 275 |
| MsG0880046282.01.T01 | AT2G04220 | 45.130 | 308 | 147 | 6 | 14 | 313 | 14 | 307 | 1.50e-87 | 265 |
| MsG0880046282.01.T01 | AT5G48270 | 45.152 | 330 | 137 | 10 | 8 | 313 | 13 | 322 | 7.79e-85 | 258 |
| MsG0880046282.01.T01 | AT5G28150 | 39.236 | 288 | 150 | 6 | 27 | 313 | 26 | 289 | 5.40e-67 | 211 |
| MsG0880046282.01.T01 | AT3G04860 | 36.877 | 301 | 139 | 8 | 27 | 313 | 26 | 289 | 3.87e-63 | 202 |
| MsG0880046282.01.T01 | AT3G13229 | 37.500 | 240 | 131 | 6 | 36 | 268 | 11 | 238 | 1.74e-49 | 166 |
| MsG0880046282.01.T01 | AT2G27770 | 33.904 | 292 | 170 | 9 | 28 | 312 | 45 | 320 | 1.14e-41 | 147 |
| MsG0880046282.01.T01 | AT5G11000 | 37.500 | 192 | 92 | 6 | 85 | 267 | 100 | 272 | 3.52e-33 | 126 |
| MsG0880046282.01.T01 | AT2G25200 | 29.927 | 274 | 137 | 9 | 7 | 255 | 14 | 257 | 3.01e-24 | 101 |
| MsG0880046282.01.T01 | AT2G36470 | 27.636 | 275 | 153 | 9 | 6 | 259 | 3 | 252 | 1.96e-18 | 84.7 |
Find 61 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTGAATTTAGCAGCTTTA+AGG | 0.146488 | 8:+71518688 | None:intergenic |
| AAATGAGAATTGAAGTTTAT+TGG | 0.176442 | 8:-71518287 | MsG0880046282.01.T01:CDS |
| GTATATTGTGCTTCTCCTTC+TGG | 0.183600 | 8:+71518807 | None:intergenic |
| TCAAAGAAAGAGCATATATT+TGG | 0.217802 | 8:-71518528 | MsG0880046282.01.T01:CDS |
| TTCCTTGCTTGAATTGATAA+TGG | 0.265556 | 8:+71518168 | None:intergenic |
| AATGAGAATTGAAGTTTATT+GGG | 0.266965 | 8:-71518286 | MsG0880046282.01.T01:CDS |
| AGCTCTTATTGATCCTATAT+TGG | 0.278455 | 8:-71518553 | MsG0880046282.01.T01:CDS |
| GAAGAGGTTGTTCTTCTTCT+TGG | 0.286718 | 8:-71518618 | MsG0880046282.01.T01:CDS |
| TGGCTTTAGTTCAACCTTGC+AGG | 0.306793 | 8:+71518785 | None:intergenic |
| TCAAAACGGTTTATAGTTGA+TGG | 0.314981 | 8:-71518738 | MsG0880046282.01.T01:CDS |
| TCTTTCTTTGAAACCAATAT+AGG | 0.324966 | 8:+71518540 | None:intergenic |
| ATCTCCATCTCTGGCTGAAC+TGG | 0.326566 | 8:+71518390 | None:intergenic |
| GAAATAGTAGAAGACAAAAT+TGG | 0.352145 | 8:+71518207 | None:intergenic |
| CATTTGCAATGGAAGTTTAG+AGG | 0.360380 | 8:-71518333 | MsG0880046282.01.T01:CDS |
| TTTGCTTGTTTCTTTATGCT+TGG | 0.399365 | 8:-71518101 | MsG0880046282.01.T01:CDS |
| CTTGTTTCTTTATGCTTGGA+AGG | 0.403606 | 8:-71518097 | MsG0880046282.01.T01:CDS |
| CATGATTGGTTATTTAGTCC+TGG | 0.407759 | 8:-71518258 | MsG0880046282.01.T01:CDS |
| TCAATTGAATGCAAGAATAG+AGG | 0.423284 | 8:-71518447 | MsG0880046282.01.T01:CDS |
| AAACATGCTTATAGAAGAAC+AGG | 0.424820 | 8:-71518585 | MsG0880046282.01.T01:CDS |
| GATAAGAATTGATGGACATT+TGG | 0.428617 | 8:-71518370 | MsG0880046282.01.T01:CDS |
| TTTATTGGGATGTTCATGAT+TGG | 0.432268 | 8:-71518272 | MsG0880046282.01.T01:CDS |
| GAATGCAAGAATAGAGGAAA+TGG | 0.432427 | 8:-71518441 | MsG0880046282.01.T01:CDS |
| GGAGGCGGTGTGACACGTTC+CGG | 0.453491 | 8:-71518945 | MsG0880046282.01.T01:CDS |
| GAGATGGAGATAAGAATTGA+TGG | 0.457390 | 8:-71518378 | MsG0880046282.01.T01:CDS |
| TCAATTCTTATCTCCATCTC+TGG | 0.458329 | 8:+71518381 | None:intergenic |
| GTGGAGGGATTTAGTGTAAG+TGG | 0.468875 | 8:-71518135 | MsG0880046282.01.T01:CDS |
| ACCATGTGATGGTTATTAAA+CGG | 0.471768 | 8:+71518874 | None:intergenic |
| GCTACATAGTATTCTGAAGT+TGG | 0.475741 | 8:+71518654 | None:intergenic |
| GGTGGTGATTCTGTTGTTGT+TGG | 0.477307 | 8:-71518414 | MsG0880046282.01.T01:CDS |
| GTAAGAAGAAATTCTCAACT+AGG | 0.487655 | 8:-71518506 | MsG0880046282.01.T01:CDS |
| GGACTATCAATATCAGTAGA+AGG | 0.487808 | 8:-71518831 | MsG0880046282.01.T01:CDS |
| AAGAATAGAGGAAATGGAAA+TGG | 0.495722 | 8:-71518435 | MsG0880046282.01.T01:CDS |
| AGGACGATGCAAGACTCAAT+TGG | 0.498063 | 8:-71519014 | None:intergenic |
| GGAGAAAACAAGGTTCAAAA+CGG | 0.516137 | 8:-71518752 | MsG0880046282.01.T01:CDS |
| CTCCATTATCAATTCAAGCA+AGG | 0.540124 | 8:-71518170 | MsG0880046282.01.T01:CDS |
| TAGGGCTAAGTTTCATGAGA+AGG | 0.550186 | 8:-71518487 | MsG0880046282.01.T01:CDS |
| TGGACCAGTTCAGCCAGAGA+TGG | 0.550851 | 8:-71518394 | MsG0880046282.01.T01:CDS |
| TAAGAAGAAATTCTCAACTA+GGG | 0.554979 | 8:-71518505 | MsG0880046282.01.T01:CDS |
| AATATAGGATCAATAAGAGC+TGG | 0.556358 | 8:+71518555 | None:intergenic |
| AGCTGTTGTTTGTGATGAAG+AGG | 0.562228 | 8:-71518634 | MsG0880046282.01.T01:CDS |
| AATAGAGGAAATGGAAATGG+TGG | 0.567289 | 8:-71518432 | MsG0880046282.01.T01:CDS |
| AGTTTCATGAGAAGGGTAAG+TGG | 0.571065 | 8:-71518479 | MsG0880046282.01.T01:CDS |
| AGGGCTAAGTTTCATGAGAA+GGG | 0.578095 | 8:-71518486 | MsG0880046282.01.T01:CDS |
| AGCAAGGAATTGTGAATCAG+TGG | 0.580387 | 8:-71518154 | MsG0880046282.01.T01:CDS |
| TGACATGTATACGCTCTGAC+CGG | 0.584425 | 8:+71518926 | None:intergenic |
| TCATCGGTTAGCTTCTCTGC+TGG | 0.589818 | 8:+71518972 | None:intergenic |
| CTTAAAGCTGCTAAATTCAA+CGG | 0.595397 | 8:-71518687 | MsG0880046282.01.T01:CDS |
| TTCATGTGAAGCATTTGCAA+TGG | 0.606815 | 8:-71518344 | MsG0880046282.01.T01:CDS |
| TCTGCTGGTGAAAAGCATGT+AGG | 0.609956 | 8:+71518987 | None:intergenic |
| CACACCGCCTCCGTGATCAT+CGG | 0.616552 | 8:+71518956 | None:intergenic |
| ATATCAGTAGAAGGTCCAGA+AGG | 0.624892 | 8:-71518822 | MsG0880046282.01.T01:CDS |
| AACAAAGCATGTTTCAAACC+AGG | 0.625116 | 8:+71518240 | None:intergenic |
| GAGAAGCTAACCGATGATCA+CGG | 0.626304 | 8:-71518966 | MsG0880046282.01.T01:CDS |
| AAGGAATTGTGAATCAGTGG+AGG | 0.628434 | 8:-71518151 | MsG0880046282.01.T01:CDS |
| CTAACCGATGATCACGGAGG+CGG | 0.645937 | 8:-71518960 | MsG0880046282.01.T01:CDS |
| AGGAATTGTGAATCAGTGGA+GGG | 0.649065 | 8:-71518150 | MsG0880046282.01.T01:CDS |
| GCAAGGTTGAACTAAAGCCA+TGG | 0.651552 | 8:-71518782 | MsG0880046282.01.T01:CDS |
| GCCGTTTAATAACCATCACA+TGG | 0.661727 | 8:-71518875 | MsG0880046282.01.T01:CDS |
| CATGTCAGTATACAGAACAA+AGG | 0.665719 | 8:-71518910 | MsG0880046282.01.T01:CDS |
| AGAAGCACAATATACCTGCA+AGG | 0.665748 | 8:-71518799 | MsG0880046282.01.T01:CDS |
| AAGCTAACCGATGATCACGG+AGG | 0.775675 | 8:-71518963 | MsG0880046282.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATGAGAATTGAAGTTTAT+TGG | - | Chr8:71518810-71518829 | MsG0880046282.01.T01:CDS | 20.0% |
| !! | AATGAGAATTGAAGTTTATT+GGG | - | Chr8:71518811-71518830 | MsG0880046282.01.T01:CDS | 20.0% |
| ! | GAAATAGTAGAAGACAAAAT+TGG | + | Chr8:71518893-71518912 | None:intergenic | 25.0% |
| ! | TAAGAAGAAATTCTCAACTA+GGG | - | Chr8:71518592-71518611 | MsG0880046282.01.T01:CDS | 25.0% |
| !! | TCAAAGAAAGAGCATATATT+TGG | - | Chr8:71518569-71518588 | MsG0880046282.01.T01:CDS | 25.0% |
| !!! | TCTTTCTTTGAAACCAATAT+AGG | + | Chr8:71518560-71518579 | None:intergenic | 25.0% |
| !!! | TGCAAAAATTTGTTACTTCA+TGG | - | Chr8:71518245-71518264 | MsG0880046282.01.T01:CDS | 25.0% |
| AAACATGCTTATAGAAGAAC+AGG | - | Chr8:71518512-71518531 | MsG0880046282.01.T01:CDS | 30.0% | |
| AAGAATAGAGGAAATGGAAA+TGG | - | Chr8:71518662-71518681 | MsG0880046282.01.T01:CDS | 30.0% | |
| AATATAGGATCAATAAGAGC+TGG | + | Chr8:71518545-71518564 | None:intergenic | 30.0% | |
| ACCATGTGATGGTTATTAAA+CGG | + | Chr8:71518226-71518245 | None:intergenic | 30.0% | |
| AGCTCTTATTGATCCTATAT+TGG | - | Chr8:71518544-71518563 | MsG0880046282.01.T01:CDS | 30.0% | |
| CTTAAAGCTGCTAAATTCAA+CGG | - | Chr8:71518410-71518429 | MsG0880046282.01.T01:CDS | 30.0% | |
| GTAAGAAGAAATTCTCAACT+AGG | - | Chr8:71518591-71518610 | MsG0880046282.01.T01:CDS | 30.0% | |
| TCAAAACGGTTTATAGTTGA+TGG | - | Chr8:71518359-71518378 | MsG0880046282.01.T01:CDS | 30.0% | |
| TCAATTGAATGCAAGAATAG+AGG | - | Chr8:71518650-71518669 | MsG0880046282.01.T01:CDS | 30.0% | |
| TTCCTTGCTTGAATTGATAA+TGG | + | Chr8:71518932-71518951 | None:intergenic | 30.0% | |
| TTTATTGGGATGTTCATGAT+TGG | - | Chr8:71518825-71518844 | MsG0880046282.01.T01:CDS | 30.0% | |
| ! | AACTAAAGCCATGGTATTTT+TGG | - | Chr8:71518324-71518343 | MsG0880046282.01.T01:CDS | 30.0% |
| ! | GATAAGAATTGATGGACATT+TGG | - | Chr8:71518727-71518746 | MsG0880046282.01.T01:CDS | 30.0% |
| ! | TGTTTTCTCCAAAAATACCA+TGG | + | Chr8:71518335-71518354 | None:intergenic | 30.0% |
| ! | TTTGCTTGTTTCTTTATGCT+TGG | - | Chr8:71518996-71519015 | MsG0880046282.01.T01:CDS | 30.0% |
| !!! | TGGTATTTTTGGAGAAAACA+AGG | - | Chr8:71518335-71518354 | MsG0880046282.01.T01:CDS | 30.0% |
| AACAAAGCATGTTTCAAACC+AGG | + | Chr8:71518860-71518879 | None:intergenic | 35.0% | |
| AATAGAGGAAATGGAAATGG+TGG | - | Chr8:71518665-71518684 | MsG0880046282.01.T01:CDS | 35.0% | |
| CATGTCAGTATACAGAACAA+AGG | - | Chr8:71518187-71518206 | MsG0880046282.01.T01:CDS | 35.0% | |
| CATTTGCAATGGAAGTTTAG+AGG | - | Chr8:71518764-71518783 | MsG0880046282.01.T01:CDS | 35.0% | |
| CGTTGAATTTAGCAGCTTTA+AGG | + | Chr8:71518412-71518431 | None:intergenic | 35.0% | |
| CTCCATTATCAATTCAAGCA+AGG | - | Chr8:71518927-71518946 | MsG0880046282.01.T01:CDS | 35.0% | |
| GAATGCAAGAATAGAGGAAA+TGG | - | Chr8:71518656-71518675 | MsG0880046282.01.T01:CDS | 35.0% | |
| GAGATGGAGATAAGAATTGA+TGG | - | Chr8:71518719-71518738 | MsG0880046282.01.T01:CDS | 35.0% | |
| GGACTATCAATATCAGTAGA+AGG | - | Chr8:71518266-71518285 | MsG0880046282.01.T01:CDS | 35.0% | |
| GGAGAAAACAAGGTTCAAAA+CGG | - | Chr8:71518345-71518364 | MsG0880046282.01.T01:CDS | 35.0% | |
| TCAATTCTTATCTCCATCTC+TGG | + | Chr8:71518719-71518738 | None:intergenic | 35.0% | |
| ! | ACAAAGCTGTTGACATTTTC+TGG | - | Chr8:71518384-71518403 | MsG0880046282.01.T01:CDS | 35.0% |
| ! | CAAAGCTGTTGACATTTTCT+GGG | - | Chr8:71518385-71518404 | MsG0880046282.01.T01:CDS | 35.0% |
| ! | CAAATTTTTGCACCATGTGA+TGG | + | Chr8:71518237-71518256 | None:intergenic | 35.0% |
| ! | CATGATTGGTTATTTAGTCC+TGG | - | Chr8:71518839-71518858 | MsG0880046282.01.T01:CDS | 35.0% |
| ! | CTTGTTTCTTTATGCTTGGA+AGG | - | Chr8:71519000-71519019 | MsG0880046282.01.T01:CDS | 35.0% |
| ! | TTCATGTGAAGCATTTGCAA+TGG | - | Chr8:71518753-71518772 | MsG0880046282.01.T01:CDS | 35.0% |
| !! | GCTACATAGTATTCTGAAGT+TGG | + | Chr8:71518446-71518465 | None:intergenic | 35.0% |
| AAGGAATTGTGAATCAGTGG+AGG | - | Chr8:71518946-71518965 | MsG0880046282.01.T01:CDS | 40.0% | |
| AGCAAGGAATTGTGAATCAG+TGG | - | Chr8:71518943-71518962 | MsG0880046282.01.T01:CDS | 40.0% | |
| AGGAATTGTGAATCAGTGGA+GGG | - | Chr8:71518947-71518966 | MsG0880046282.01.T01:CDS | 40.0% | |
| AGGGCTAAGTTTCATGAGAA+GGG | - | Chr8:71518611-71518630 | MsG0880046282.01.T01:CDS | 40.0% | |
| AGTTTCATGAGAAGGGTAAG+TGG | - | Chr8:71518618-71518637 | MsG0880046282.01.T01:CDS | 40.0% | |
| ATATCAGTAGAAGGTCCAGA+AGG | - | Chr8:71518275-71518294 | MsG0880046282.01.T01:CDS | 40.0% | |
| GAAGAGGTTGTTCTTCTTCT+TGG | - | Chr8:71518479-71518498 | MsG0880046282.01.T01:CDS | 40.0% | |
| GCCGTTTAATAACCATCACA+TGG | - | Chr8:71518222-71518241 | MsG0880046282.01.T01:CDS | 40.0% | |
| GTATATTGTGCTTCTCCTTC+TGG | + | Chr8:71518293-71518312 | None:intergenic | 40.0% | |
| TAGGGCTAAGTTTCATGAGA+AGG | - | Chr8:71518610-71518629 | MsG0880046282.01.T01:CDS | 40.0% | |
| ! | AGAAGCACAATATACCTGCA+AGG | - | Chr8:71518298-71518317 | MsG0880046282.01.T01:CDS | 40.0% |
| ! | AGCTGTTGTTTGTGATGAAG+AGG | - | Chr8:71518463-71518482 | MsG0880046282.01.T01:CDS | 40.0% |
| GAGAAGCTAACCGATGATCA+CGG | - | Chr8:71518131-71518150 | MsG0880046282.01.T01:CDS | 45.0% | |
| GCAAGGTTGAACTAAAGCCA+TGG | - | Chr8:71518315-71518334 | MsG0880046282.01.T01:CDS | 45.0% | |
| GGTGGTGATTCTGTTGTTGT+TGG | - | Chr8:71518683-71518702 | MsG0880046282.01.T01:CDS | 45.0% | |
| GTGGAGGGATTTAGTGTAAG+TGG | - | Chr8:71518962-71518981 | MsG0880046282.01.T01:CDS | 45.0% | |
| TGACATGTATACGCTCTGAC+CGG | + | Chr8:71518174-71518193 | None:intergenic | 45.0% | |
| ! | TCTGCTGGTGAAAAGCATGT+AGG | + | Chr8:71518113-71518132 | None:intergenic | 45.0% |
| !! | TGGCTTTAGTTCAACCTTGC+AGG | + | Chr8:71518315-71518334 | None:intergenic | 45.0% |
| AAGCTAACCGATGATCACGG+AGG | - | Chr8:71518134-71518153 | MsG0880046282.01.T01:CDS | 50.0% | |
| ATCTCCATCTCTGGCTGAAC+TGG | + | Chr8:71518710-71518729 | None:intergenic | 50.0% | |
| !! | TCATCGGTTAGCTTCTCTGC+TGG | + | Chr8:71518128-71518147 | None:intergenic | 50.0% |
| CTAACCGATGATCACGGAGG+CGG | - | Chr8:71518137-71518156 | MsG0880046282.01.T01:CDS | 55.0% | |
| TGGACCAGTTCAGCCAGAGA+TGG | - | Chr8:71518703-71518722 | MsG0880046282.01.T01:CDS | 55.0% | |
| CACACCGCCTCCGTGATCAT+CGG | + | Chr8:71518144-71518163 | None:intergenic | 60.0% | |
| GGAGGCGGTGTGACACGTTC+CGG | - | Chr8:71518152-71518171 | MsG0880046282.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 71518089 | 71519030 | 71518089 | ID=MsG0880046282.01;Name=MsG0880046282.01 |
| Chr8 | mRNA | 71518089 | 71519030 | 71518089 | ID=MsG0880046282.01.T01;Parent=MsG0880046282.01;Name=MsG0880046282.01.T01;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|313 |
| Chr8 | exon | 71518089 | 71519030 | 71518089 | ID=MsG0880046282.01.T01:exon:27854;Parent=MsG0880046282.01.T01 |
| Chr8 | CDS | 71518089 | 71519030 | 71518089 | ID=MsG0880046282.01.T01:cds;Parent=MsG0880046282.01.T01 |
| Gene Sequence |
| Protein sequence |
