AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046323.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046323.01.T01 MTR_4g105600 93.370 362 12 2 1 362 1 350 0.0 692
MsG0880046323.01.T01 MTR_3g077630 65.574 366 108 5 1 362 1 352 2.00e-168 474
MsG0880046323.01.T01 MTR_8g069820 48.611 360 162 5 1 357 1 340 3.14e-113 333
MsG0880046323.01.T01 MTR_5g033940 47.414 348 162 5 16 362 1 328 4.84e-110 325
MsG0880046323.01.T01 MTR_7g035095 47.262 347 146 6 17 360 6 318 5.66e-106 314
MsG0880046323.01.T01 MTR_8g069805 45.690 348 156 4 18 357 33 355 2.82e-102 306
MsG0880046323.01.T01 MTR_1g086330 40.461 304 165 5 60 358 33 325 8.29e-73 229
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046323.01.T01 AT5G62960 51.130 354 149 4 9 362 18 347 7.00e-134 386
MsG0880046323.01.T01 AT5G62960 50.159 315 133 4 9 323 18 308 9.64e-114 333
MsG0880046323.01.T01 AT1G70505 45.706 361 169 8 2 357 13 351 2.86e-105 313
MsG0880046323.01.T01 AT1G10660 45.000 340 162 5 16 353 1 317 1.44e-101 303
MsG0880046323.01.T01 AT1G10660 45.000 340 162 5 16 353 1 317 1.44e-101 303
MsG0880046323.01.T01 AT1G10660 45.000 340 162 5 16 353 1 317 1.44e-101 303
MsG0880046323.01.T01 AT1G10660 45.000 340 162 5 16 353 1 317 1.44e-101 303
MsG0880046323.01.T01 AT1G70505 46.398 347 159 8 16 357 1 325 2.15e-101 303
MsG0880046323.01.T01 AT3G27770 38.053 339 173 6 19 351 8 315 1.51e-77 241
MsG0880046323.01.T01 AT3G27770 40.602 266 138 4 92 351 21 272 7.46e-66 210
MsG0880046323.01.T01 AT1G70505 42.403 283 136 8 2 279 13 273 3.64e-65 211
MsG0880046323.01.T01 AT1G70505 43.071 267 125 8 16 277 1 245 2.33e-62 200
MsG0880046323.01.T01 AT2G47115 36.392 316 171 4 44 357 10 297 1.10e-54 182

Find 67 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCAGTAACCATCTATTT+TGG 0.079057 8:-72024214 MsG0880046323.01.T01:CDS
CTGGCTGAATTGGAAGGTTT+TGG 0.232328 8:-72024792 MsG0880046323.01.T01:CDS
TGCTGACAGATTGTGCATTT+TGG 0.238631 8:-72023480 MsG0880046323.01.T01:CDS
CATCCCAATATTCTCCATTA+TGG 0.245782 8:-72022934 MsG0880046323.01.T01:intron
ACTTGGAAGCCTAGCCTAAA+AGG 0.265193 8:-72024596 MsG0880046323.01.T01:CDS
ATTTATGTTGTAATCTTTGA+TGG 0.296840 8:+72023435 None:intergenic
ATTGATTGTATGCATACTTA+TGG 0.309799 8:+72023288 None:intergenic
TGTGTTTCAAATAATGTTCC+AGG 0.332563 8:-72023906 MsG0880046323.01.T01:CDS
CTCAGAGTTACTGGCTGAAT+TGG 0.333517 8:-72024802 MsG0880046323.01.T01:CDS
CATACCATAATGGAGAATAT+TGG 0.334322 8:+72022930 None:intergenic
ATTTATTACCCCAAAATAGA+TGG 0.346099 8:+72024204 None:intergenic
ATACAACCACTCAGAGTTAC+TGG 0.359432 8:-72024811 MsG0880046323.01.T01:CDS
ATACCATAATGGAGAATATT+GGG 0.371186 8:+72022931 None:intergenic
GATGGGATGCCAAGTTCCTT+TGG 0.371363 8:+72024844 None:intergenic
TCCGCCAACATGCAGGCATT+TGG 0.375457 8:-72023934 MsG0880046323.01.T01:CDS
ATGCCAAGTTCCTTTGGAAT+AGG 0.379818 8:+72024850 None:intergenic
AACTTTGCACTGATCCACTA+TGG 0.385326 8:-72023881 MsG0880046323.01.T01:intron
TTCATGCTATGGTTAAAATC+TGG 0.396227 8:-72023067 MsG0880046323.01.T01:intron
GACAAGTCAAGAAATGTATA+TGG 0.400521 8:+72022956 None:intergenic
AGGTTCCCTTGGTTTCGAAT+AGG 0.410358 8:-72023137 MsG0880046323.01.T01:CDS
GTCCTCTTTAGAGGTTCCCT+TGG 0.420995 8:-72023148 MsG0880046323.01.T01:intron
GGAGCTTTATCATGACTAGA+TGG 0.427797 8:+72023971 None:intergenic
CTAGATGGATTAGAACTTTG+AGG 0.437494 8:+72023986 None:intergenic
CACTCGCTTTCTTATGATGC+TGG 0.437562 8:+72024071 None:intergenic
AATTCACCCGGCATGGTTGT+TGG 0.444926 8:-72024573 MsG0880046323.01.T01:CDS
TTGCTGCATCTTCCCTGCTA+TGG 0.447898 8:-72022753 MsG0880046323.01.T01:CDS
CTGTCACATTGGTATGAGTC+AGG 0.466338 8:+72022678 None:intergenic
AACACAAAGTGTTGTCAAAA+CGG 0.468493 8:-72022704 MsG0880046323.01.T01:CDS
TCAATGGATTGTTCATGCTA+TGG 0.470593 8:-72023078 MsG0880046323.01.T01:CDS
TAAGATGAAGATGCCATAGC+AGG 0.480480 8:+72022740 None:intergenic
GGATGTTTGCTCTCCATGCA+TGG 0.492051 8:-72024100 MsG0880046323.01.T01:CDS
TAATCTTTGATGGTTAGAAA+AGG 0.492262 8:+72023445 None:intergenic
TAGCCTATTCCAAAGGAACT+TGG 0.506335 8:-72024853 MsG0880046323.01.T01:CDS
TAAGAAAGCGAGTGGCGATA+AGG 0.511240 8:-72024062 MsG0880046323.01.T01:CDS
TTAAAGCTGTATCTCCTAGC+AGG 0.511577 8:+72023257 None:intergenic
TCCAAATGCCTGCATGTTGG+CGG 0.530272 8:+72023933 None:intergenic
GGATCAGTGCAAAGTTTACC+TGG 0.534253 8:+72023888 None:intergenic
GAGTTACTGGCTGAATTGGA+AGG 0.536808 8:-72024798 MsG0880046323.01.T01:CDS
CTAAAAGCCAACAACCATGC+CGG 0.540047 8:+72024566 None:intergenic
TAAAAGCCAACAACCATGCC+GGG 0.540049 8:+72024567 None:intergenic
TATAAGAAATGATGAAAAGA+TGG 0.541640 8:+72024742 None:intergenic
ACATAGAATTTCAACCATAG+TGG 0.543996 8:+72023867 None:intergenic
CATATTGTCCGCCAACATGC+AGG 0.549693 8:-72023941 MsG0880046323.01.T01:CDS
AGATACAGCTTTAAATTGCA+TGG 0.550791 8:-72023248 MsG0880046323.01.T01:intron
ATACTCACTGTCACTACAGA+TGG 0.556940 8:-72024509 MsG0880046323.01.T01:CDS
GCTCAAGTCATCTGTCACAT+TGG 0.560361 8:+72022667 None:intergenic
GGTTGTATCAGAAGTCATGA+TGG 0.565616 8:+72024826 None:intergenic
AAGTATCCTATTCGAAACCA+AGG 0.581081 8:+72023131 None:intergenic
TAAAAGGAATTCACCCGGCA+TGG 0.585380 8:-72024580 MsG0880046323.01.T01:CDS
TTTGTAATAGCCTATTCCAA+AGG 0.594430 8:-72024860 MsG0880046323.01.T01:CDS
GTGGATGGATATTCTGAGCA+AGG 0.606530 8:-72024031 MsG0880046323.01.T01:CDS
TGACATATGTAACTGTCCAC+AGG 0.606686 8:+72023105 None:intergenic
AACTCCAAATGCCTGCATGT+TGG 0.607062 8:+72023930 None:intergenic
AAGATGAAGATGCCATAGCA+GGG 0.610594 8:+72022741 None:intergenic
CTCACTGTCACTACAGATGG+AGG 0.623006 8:-72024506 MsG0880046323.01.T01:CDS
TGGCGGACAATATGTTCTTG+TGG 0.629695 8:+72023950 None:intergenic
GACAACAAGAAATGATGACA+TGG 0.643144 8:-72024687 MsG0880046323.01.T01:CDS
AGTATCCTATTCGAAACCAA+GGG 0.649563 8:+72023132 None:intergenic
TAGCCTAAAAGGAATTCACC+CGG 0.652925 8:-72024585 MsG0880046323.01.T01:CDS
CAGCATCATAAGAAAGCGAG+TGG 0.656247 8:-72024070 MsG0880046323.01.T01:CDS
ATGCTGGTAACATCCATGCA+TGG 0.665797 8:+72024087 None:intergenic
GTTGTATCAGAAGTCATGAT+GGG 0.667048 8:+72024827 None:intergenic
ATTTCTTATATGCAAGTACG+AGG 0.678969 8:-72024729 MsG0880046323.01.T01:CDS
ATAGCAGGGAAGATGCAGCA+AGG 0.683949 8:+72022755 None:intergenic
GATAAGGTGAACAATGTGGA+TGG 0.692642 8:-72024046 MsG0880046323.01.T01:CDS
ATTCAGCCAGTAACTCTGAG+TGG 0.705294 8:+72024805 None:intergenic
TGGCGATAAGGTGAACAATG+TGG 0.710670 8:-72024050 MsG0880046323.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTAATCTTTTGATT+TGG - Chr8:72023280-72023299 MsG0880046323.01.T01:CDS 10.0%
!!! TTTGTTTTCTTTTAAATTAT+TGG - Chr8:72023152-72023171 MsG0880046323.01.T01:intron 10.0%
!! AAAAAATCTTCATACCATAA+TGG + Chr8:72024623-72024642 None:intergenic 20.0%
!! AAATCCTGAATAGAAAATTA+AGG + Chr8:72024660-72024679 None:intergenic 20.0%
!! AAGTCAAAGTTATTAAGAAA+GGG + Chr8:72024179-72024198 None:intergenic 20.0%
!! ATCATTTATTTATTGTCTCA+TGG - Chr8:72024143-72024162 MsG0880046323.01.T01:intron 20.0%
!! ATTACCTTTGAATCAAAATT+TGG - Chr8:72023098-72023117 MsG0880046323.01.T01:CDS 20.0%
!! ATTTATGTTGTAATCTTTGA+TGG + Chr8:72024108-72024127 None:intergenic 20.0%
!! GAAAATGTACTAAAAATGAA+GGG + Chr8:72023930-72023949 None:intergenic 20.0%
!! TAAGTCAAAGTTATTAAGAA+AGG + Chr8:72024180-72024199 None:intergenic 20.0%
!! TATAAGAAATGATGAAAAGA+TGG + Chr8:72022801-72022820 None:intergenic 20.0%
!!! TTACATATGTCATTTTTCAA+TGG - Chr8:72024446-72024465 MsG0880046323.01.T01:intron 20.0%
!!! TTTTAATAATCTGTGTTATG+TGG - Chr8:72024222-72024241 MsG0880046323.01.T01:CDS 20.0%
! AAAAATCATGATGAAAACAG+AGG + Chr8:72023952-72023971 None:intergenic 25.0%
! AAGAGGACAAAAAATAAACA+AGG + Chr8:72024380-72024399 None:intergenic 25.0%
! AGAGGACAAAAAATAAACAA+GGG + Chr8:72024379-72024398 None:intergenic 25.0%
! ATTGATTGTATGCATACTTA+TGG + Chr8:72024255-72024274 None:intergenic 25.0%
! ATTTATTACCCCAAAATAGA+TGG + Chr8:72023339-72023358 None:intergenic 25.0%
! GGAAAATGTACTAAAAATGA+AGG + Chr8:72023931-72023950 None:intergenic 25.0%
! TTAACATAAGTTTCTTGTTC+TGG - Chr8:72024549-72024568 MsG0880046323.01.T01:CDS 25.0%
!! ATACCATAATGGAGAATATT+GGG + Chr8:72024612-72024631 None:intergenic 25.0%
!! ATTAAAATTGAGAGCATGAA+AGG - Chr8:72023878-72023897 MsG0880046323.01.T01:intron 25.0%
!! TAATCTTTGATGGTTAGAAA+AGG + Chr8:72024098-72024117 None:intergenic 25.0%
!! TTAAAATTGAGAGCATGAAA+GGG - Chr8:72023879-72023898 MsG0880046323.01.T01:intron 25.0%
!! TTTGCCTTAATTTTCTATTC+AGG - Chr8:72024653-72024672 MsG0880046323.01.T01:CDS 25.0%
!! TTTTGCATTTATTGTGCTTA+TGG - Chr8:72023000-72023019 MsG0880046323.01.T01:intron 25.0%
!!! TTATTTTTTGTCCTCTTTAG+AGG - Chr8:72024383-72024402 MsG0880046323.01.T01:intron 25.0%
!!! TTTTTCCAGTTACTTTTCAA+TGG - Chr8:72024762-72024781 MsG0880046323.01.T01:CDS 25.0%
ACATAGAATTTCAACCATAG+TGG + Chr8:72023676-72023695 None:intergenic 30.0%
ATGTCAATTGGCAAAACTAT+AGG + Chr8:72023986-72024005 None:intergenic 30.0%
ATTTCTTATATGCAAGTACG+AGG - Chr8:72022811-72022830 MsG0880046323.01.T01:intron 30.0%
GACAAGTCAAGAAATGTATA+TGG + Chr8:72024587-72024606 None:intergenic 30.0%
TCTTGTGAATAGATTAATGC+AGG - Chr8:72024029-72024048 MsG0880046323.01.T01:CDS 30.0%
TGTGTTTCAAATAATGTTCC+AGG - Chr8:72023634-72023653 MsG0880046323.01.T01:intron 30.0%
TTCATGCTATGGTTAAAATC+TGG - Chr8:72024473-72024492 MsG0880046323.01.T01:intron 30.0%
TTGATGTTGTCTATGTCAAT+TGG + Chr8:72023998-72024017 None:intergenic 30.0%
TTTGTAATAGCCTATTCCAA+AGG - Chr8:72022680-72022699 MsG0880046323.01.T01:CDS 30.0%
! ACTTCAGTAACCATCTATTT+TGG - Chr8:72023326-72023345 MsG0880046323.01.T01:intron 30.0%
! ATCATCATCAATTTTGTACG+AGG - Chr8:72022916-72022935 MsG0880046323.01.T01:intron 30.0%
! CATACCATAATGGAGAATAT+TGG + Chr8:72024613-72024632 None:intergenic 30.0%
! CTTCAGTAACCATCTATTTT+GGG - Chr8:72023327-72023346 MsG0880046323.01.T01:intron 30.0%
! TTCAGTAACCATCTATTTTG+GGG - Chr8:72023328-72023347 MsG0880046323.01.T01:intron 30.0%
!! AACACAAAGTGTTGTCAAAA+CGG - Chr8:72024836-72024855 MsG0880046323.01.T01:CDS 30.0%
!! ACGAGGTTTTACTTTTATCA+TGG - Chr8:72022828-72022847 MsG0880046323.01.T01:intron 30.0%
!! ACGATGATGATGTTTCTTTT+TGG + Chr8:72022883-72022902 None:intergenic 30.0%
!! AGATACAGCTTTAAATTGCA+TGG - Chr8:72024292-72024311 MsG0880046323.01.T01:intron 30.0%
!! GTTTCTTGTTCTGGAAAATT+AGG - Chr8:72024558-72024577 MsG0880046323.01.T01:CDS 30.0%
!!! GCATCCAAATTTTGATTCAA+AGG + Chr8:72023105-72023124 None:intergenic 30.0%
AAGTATCCTATTCGAAACCA+AGG + Chr8:72024412-72024431 None:intergenic 35.0%
AGTATCCTATTCGAAACCAA+GGG + Chr8:72024411-72024430 None:intergenic 35.0%
CATCCCAATATTCTCCATTA+TGG - Chr8:72024606-72024625 MsG0880046323.01.T01:CDS 35.0%
GACAACAAGAAATGATGACA+TGG - Chr8:72022853-72022872 MsG0880046323.01.T01:intron 35.0%
GGTAAGAATTCACATATGCA+TGG + Chr8:72024358-72024377 None:intergenic 35.0%
GTACTAAAAATGAAGGGCTT+TGG + Chr8:72023924-72023943 None:intergenic 35.0%
GTTGTATCAGAAGTCATGAT+GGG + Chr8:72022716-72022735 None:intergenic 35.0%
TGAATAGATTAATGCAGGTG+CGG - Chr8:72024034-72024053 MsG0880046323.01.T01:CDS 35.0%
! ATATGCATTGATGTTGTAGC+TGG - Chr8:72023418-72023437 MsG0880046323.01.T01:intron 35.0%
! TATGCATTGATGTTGTAGCT+GGG - Chr8:72023419-72023438 MsG0880046323.01.T01:intron 35.0%
! TTTTGTACGAGGATGAAACT+TGG - Chr8:72022927-72022946 MsG0880046323.01.T01:intron 35.0%
!! CTAGATGGATTAGAACTTTG+AGG + Chr8:72023557-72023576 None:intergenic 35.0%
!! TCAATGGATTGTTCATGCTA+TGG - Chr8:72024462-72024481 MsG0880046323.01.T01:intron 35.0%
!! TCTTGTTCTGGAAAATTAGG+TGG - Chr8:72024561-72024580 MsG0880046323.01.T01:CDS 35.0%
!! TTGATTTGGTTCTGTGAAAC+AGG - Chr8:72023294-72023313 MsG0880046323.01.T01:CDS 35.0%
AAGATGAAGATGCCATAGCA+GGG + Chr8:72024802-72024821 None:intergenic 40.0%
ATACAACCACTCAGAGTTAC+TGG - Chr8:72022729-72022748 MsG0880046323.01.T01:CDS 40.0%
ATACTCACTGTCACTACAGA+TGG - Chr8:72023031-72023050 MsG0880046323.01.T01:intron 40.0%
CAAGGCCATTGAAAAGTAAC+TGG + Chr8:72024770-72024789 None:intergenic 40.0%
GATAAGGTGAACAATGTGGA+TGG - Chr8:72023494-72023513 MsG0880046323.01.T01:intron 40.0%
GCTGTTGAAATGAATCAGTG+TGG - Chr8:72023123-72023142 MsG0880046323.01.T01:CDS 40.0%
GGTTGTATCAGAAGTCATGA+TGG + Chr8:72022717-72022736 None:intergenic 40.0%
TAAGATGAAGATGCCATAGC+AGG + Chr8:72024803-72024822 None:intergenic 40.0%
TAGCCTAAAAGGAATTCACC+CGG - Chr8:72022955-72022974 MsG0880046323.01.T01:CDS 40.0%
TAGCCTATTCCAAAGGAACT+TGG - Chr8:72022687-72022706 MsG0880046323.01.T01:CDS 40.0%
TGACATATGTAACTGTCCAC+AGG + Chr8:72024438-72024457 None:intergenic 40.0%
TTAAAGCTGTATCTCCTAGC+AGG + Chr8:72024286-72024305 None:intergenic 40.0%
! AACTTTGCACTGATCCACTA+TGG - Chr8:72023659-72023678 MsG0880046323.01.T01:intron 40.0%
! GAATAGGATACTTTTGCCTG+TGG - Chr8:72024419-72024438 MsG0880046323.01.T01:intron 40.0%
! GCATGCAAAACTTTGAAAGC+AGG - Chr8:72023833-72023852 MsG0880046323.01.T01:intron 40.0%
! GGAGCTTTATCATGACTAGA+TGG + Chr8:72023572-72023591 None:intergenic 40.0%
! TGCTGACAGATTGTGCATTT+TGG - Chr8:72024060-72024079 MsG0880046323.01.T01:CDS 40.0%
!! ATGCCAAGTTCCTTTGGAAT+AGG + Chr8:72022693-72022712 None:intergenic 40.0%
!! ATTTGGTTCTGTGAAACAGG+TGG - Chr8:72023297-72023316 MsG0880046323.01.T01:intron 40.0%
!!! ATCAATGCTGTTTTCCTGCT+AGG - Chr8:72024269-72024288 MsG0880046323.01.T01:intron 40.0%
AACTCCAAATGCCTGCATGT+TGG + Chr8:72023613-72023632 None:intergenic 45.0%
ACTTGGAAGCCTAGCCTAAA+AGG - Chr8:72022944-72022963 MsG0880046323.01.T01:CDS 45.0%
AGGTTCCCTTGGTTTCGAAT+AGG - Chr8:72024403-72024422 MsG0880046323.01.T01:intron 45.0%
ATGCTGGTAACATCCATGCA+TGG + Chr8:72023456-72023475 None:intergenic 45.0%
ATTCAGCCAGTAACTCTGAG+TGG + Chr8:72022738-72022757 None:intergenic 45.0%
CACTCGCTTTCTTATGATGC+TGG + Chr8:72023472-72023491 None:intergenic 45.0%
CAGCATCATAAGAAAGCGAG+TGG - Chr8:72023470-72023489 MsG0880046323.01.T01:CDS 45.0%
CTAAAAGCCAACAACCATGC+CGG + Chr8:72022977-72022996 None:intergenic 45.0%
CTGTCACATTGGTATGAGTC+AGG + Chr8:72024865-72024884 None:intergenic 45.0%
GGATCAGTGCAAAGTTTACC+TGG + Chr8:72023655-72023674 None:intergenic 45.0%
GTGGATGGATATTCTGAGCA+AGG - Chr8:72023509-72023528 MsG0880046323.01.T01:intron 45.0%
TAAAAGCCAACAACCATGCC+GGG + Chr8:72022976-72022995 None:intergenic 45.0%
TAAAAGGAATTCACCCGGCA+TGG - Chr8:72022960-72022979 MsG0880046323.01.T01:CDS 45.0%
TAAGAAAGCGAGTGGCGATA+AGG - Chr8:72023478-72023497 MsG0880046323.01.T01:CDS 45.0%
TGGCGATAAGGTGAACAATG+TGG - Chr8:72023490-72023509 MsG0880046323.01.T01:CDS 45.0%
! AACCAAGGGAACCTCTAAAG+AGG + Chr8:72024397-72024416 None:intergenic 45.0%
! ATGCCGGGTGAATTCCTTTT+AGG + Chr8:72022961-72022980 None:intergenic 45.0%
! CTCAGAGTTACTGGCTGAAT+TGG - Chr8:72022738-72022757 MsG0880046323.01.T01:CDS 45.0%
! CTGGCTGAATTGGAAGGTTT+TGG - Chr8:72022748-72022767 MsG0880046323.01.T01:CDS 45.0%
! GAGTTACTGGCTGAATTGGA+AGG - Chr8:72022742-72022761 MsG0880046323.01.T01:CDS 45.0%
! GGGTGAATTCCTTTTAGGCT+AGG + Chr8:72022956-72022975 None:intergenic 45.0%
! TGGCGGACAATATGTTCTTG+TGG + Chr8:72023593-72023612 None:intergenic 45.0%
AACTGCATGATGTCCGACAC+AGG - Chr8:72023763-72023782 MsG0880046323.01.T01:intron 50.0%
AATTCACCCGGCATGGTTGT+TGG - Chr8:72022967-72022986 MsG0880046323.01.T01:intron 50.0%
ATAGCAGGGAAGATGCAGCA+AGG + Chr8:72024788-72024807 None:intergenic 50.0%
CATATTGTCCGCCAACATGC+AGG - Chr8:72023599-72023618 MsG0880046323.01.T01:intron 50.0%
CTCACTGTCACTACAGATGG+AGG - Chr8:72023034-72023053 MsG0880046323.01.T01:intron 50.0%
GATGGGATGCCAAGTTCCTT+TGG + Chr8:72022699-72022718 None:intergenic 50.0%
GGATGTTTGCTCTCCATGCA+TGG - Chr8:72023440-72023459 MsG0880046323.01.T01:CDS 50.0%
TCCAAATGCCTGCATGTTGG+CGG + Chr8:72023610-72023629 None:intergenic 50.0%
TGCCTAGTATGTGCCTGTGT+CGG + Chr8:72023779-72023798 None:intergenic 50.0%
TTGCTGCATCTTCCCTGCTA+TGG - Chr8:72024787-72024806 MsG0880046323.01.T01:CDS 50.0%
! GTCCTCTTTAGAGGTTCCCT+TGG - Chr8:72024392-72024411 MsG0880046323.01.T01:intron 50.0%
GTCCGACACAGGCACATACT+AGG - Chr8:72023774-72023793 MsG0880046323.01.T01:intron 55.0%
TCCGCCAACATGCAGGCATT+TGG - Chr8:72023606-72023625 MsG0880046323.01.T01:intron 55.0%
Chromosome Type Strat End Strand Name
Chr8 gene 72022674 72024888 72022674 ID=MsG0880046323.01;Name=MsG0880046323.01
Chr8 mRNA 72022674 72024888 72022674 ID=MsG0880046323.01.T01;Parent=MsG0880046323.01;Name=MsG0880046323.01.T01;_AED=0.43;_eAED=0.44;_QI=0|0|0|1|0.71|0.75|8|0|362
Chr8 exon 72024482 72024888 72024482 ID=MsG0880046323.01.T01:exon:15630;Parent=MsG0880046323.01.T01
Chr8 exon 72024213 72024246 72024213 ID=MsG0880046323.01.T01:exon:15629;Parent=MsG0880046323.01.T01
Chr8 exon 72023882 72024125 72023882 ID=MsG0880046323.01.T01:exon:15628;Parent=MsG0880046323.01.T01
Chr8 exon 72023432 72023511 72023432 ID=MsG0880046323.01.T01:exon:15627;Parent=MsG0880046323.01.T01
Chr8 exon 72023249 72023314 72023249 ID=MsG0880046323.01.T01:exon:15626;Parent=MsG0880046323.01.T01
Chr8 exon 72023068 72023159 72023068 ID=MsG0880046323.01.T01:exon:15625;Parent=MsG0880046323.01.T01
Chr8 exon 72022935 72022982 72022935 ID=MsG0880046323.01.T01:exon:15624;Parent=MsG0880046323.01.T01
Chr8 exon 72022674 72022791 72022674 ID=MsG0880046323.01.T01:exon:15623;Parent=MsG0880046323.01.T01
Chr8 CDS 72024482 72024888 72024482 ID=MsG0880046323.01.T01:cds;Parent=MsG0880046323.01.T01
Chr8 CDS 72024213 72024246 72024213 ID=MsG0880046323.01.T01:cds;Parent=MsG0880046323.01.T01
Chr8 CDS 72023882 72024125 72023882 ID=MsG0880046323.01.T01:cds;Parent=MsG0880046323.01.T01
Chr8 CDS 72023432 72023511 72023432 ID=MsG0880046323.01.T01:cds;Parent=MsG0880046323.01.T01
Chr8 CDS 72023249 72023314 72023249 ID=MsG0880046323.01.T01:cds;Parent=MsG0880046323.01.T01
Chr8 CDS 72023068 72023159 72023068 ID=MsG0880046323.01.T01:cds;Parent=MsG0880046323.01.T01
Chr8 CDS 72022935 72022982 72022935 ID=MsG0880046323.01.T01:cds;Parent=MsG0880046323.01.T01
Chr8 CDS 72022674 72022791 72022674 ID=MsG0880046323.01.T01:cds;Parent=MsG0880046323.01.T01
Gene Sequence

>MsG0880046323.01.T01

ATGAACTTTGTAATAGCCTATTCCAAAGGAACTTGGCATCCCATCATGACTTCTGATACAACCACTCAGAGTTACTGGCTGAATTGGAAGGTTTTGGTTTGTGTCATATTAATCATACTTTCAACCATCTTTTCATCATTTCTTATATGCAAGTACGAGGTTTTACTTTTATCATGGAAGACAACAAGAAATGATGACATGGAAATCCAAAAAGAAACATCATCATCGTTGTCGTCATCATCATCATCATCAATTTTGTACGAGGATGAAACTTGGAAGCCTAGCCTAAAAGGAATTCACCCGGCATGGTTGTTGGCTTTTAGAATTTTTGCATTTATTGTGCTTATGGTGCTTCTCATACTCACTGTCACTACAGATGGAGGAAGCATCTTTTATTATTACACTCAGTGGACTTTTACTTCAGTAACCATCTATTTTGGGCTGGGATGTTTGCTCTCCATGCATGGATGTTACCAGCATCATAAGAAAGCGAGTGGCGATAAGGTGAACAATGTGGATGGATATTCTGAGCAAGGAATTGATGATGCTTGTACACTGCCTCAAAGTTCTAATCCATCTAGTCATGATAAAGCTCCACAAGAACATATTGTCCGCCAACATGCAGGCATTTGGAGTTATGTGTTTCAAATAATGTTCCAGGTAAACTTTGCACTGATCCACTATGGTGCGGTAATGCTGACAGATTGTGCATTTTGGTTCATAATTGTTCCTTTTCTAACCATCAAAGATTACAACATAAATTTATTGACCATAAGTATGCATACAATCAATGCTGTTTTCCTGCTAGGAGATACAGCTTTAAATTGCATGAGGTTCCCTTGGTTTCGAATAGGATACTTTTGCCTGTGGACAGTTACATATGTCATTTTTCAATGGATTGTTCATGCTATGGTTAAAATCTGGTGGCCATATACATTTCTTGACTTGTCATCCCAATATTCTCCATTATGTTACTTTTCAATGGCCTTGCTGCATCTTCCCTGCTATGGCATCTTCATCTTAATAATGAAGCTGAAACACAAAGTGTTGTCAAAACGGTTTCCTGACTCATACCAATGTGACAGATGA
Protein sequence

>MsG0880046323.01.T01

MNFVIAYSKGTWHPIMTSDTTTQSYWLNWKVLVCVILIILSTIFSSFLICKYEVLLLSWKTTRNDDMEIQKETSSSLSSSSSSSILYEDETWKPSLKGIHPAWLLAFRIFAFIVLMVLLILTVTTDGGSIFYYYTQWTFTSVTIYFGLGCLLSMHGCYQHHKKASGDKVNNVDGYSEQGIDDACTLPQSSNPSSHDKAPQEHIVRQHAGIWSYVFQIMFQVNFALIHYGAVMLTDCAFWFIIVPFLTIKDYNINLLTISMHTINAVFLLGDTALNCMRFPWFRIGYFCLWTVTYVIFQWIVHAMVKIWWPYTFLDLSSQYSPLCYFSMALLHLPCYGIFILIMKLKHKVLSKRFPDSYQCDR*