AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025749.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025749.01.T01 MTR_5g033940 96.575 292 10 0 1 292 1 292 0.0 582
MsG0580025749.01.T01 MTR_8g069820 62.162 296 106 2 1 292 16 309 1.11e-131 377
MsG0580025749.01.T01 MTR_8g069805 60.884 294 107 3 4 292 34 324 6.46e-127 366
MsG0580025749.01.T01 MTR_4g105600 49.833 299 141 4 1 291 16 313 7.52e-102 302
MsG0580025749.01.T01 MTR_3g077630 51.974 304 129 4 1 291 16 315 1.54e-99 296
MsG0580025749.01.T01 MTR_7g035095 48.621 290 137 5 4 293 8 285 3.61e-91 273
MsG0580025749.01.T01 MTR_1g086330 39.590 293 161 5 12 292 5 293 1.65e-63 203
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025749.01.T01 AT1G70505 56.949 295 121 4 1 291 1 293 1.89e-114 333
MsG0580025749.01.T01 AT1G70505 56.949 295 121 4 1 291 27 319 3.00e-114 333
MsG0580025749.01.T01 AT1G10660 56.522 299 114 5 1 292 1 290 2.15e-108 318
MsG0580025749.01.T01 AT1G10660 56.522 299 114 5 1 292 1 290 2.15e-108 318
MsG0580025749.01.T01 AT1G10660 56.522 299 114 5 1 292 1 290 2.15e-108 318
MsG0580025749.01.T01 AT1G10660 56.522 299 114 5 1 292 1 290 2.15e-108 318
MsG0580025749.01.T01 AT5G62960 46.259 294 145 3 2 291 26 310 3.70e-93 280
MsG0580025749.01.T01 AT5G62960 46.075 293 145 3 2 290 26 309 1.57e-92 277
MsG0580025749.01.T01 AT1G70505 53.441 247 109 4 1 243 1 245 3.22e-84 254
MsG0580025749.01.T01 AT1G70505 53.414 249 110 4 1 245 27 273 1.28e-82 253
MsG0580025749.01.T01 AT3G27770 40.000 295 155 7 7 293 11 291 2.28e-71 223
MsG0580025749.01.T01 AT3G27770 42.616 237 119 6 65 293 21 248 9.54e-60 192
MsG0580025749.01.T01 AT2G47115 38.846 260 128 4 43 292 28 266 2.46e-48 163

Find 81 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATACTAATACCTTGAGTTAT+TGG 0.142821 5:-23698916 MsG0580025749.01.T01:CDS
TATTATTCAAATATTATTTC+AGG 0.227394 5:-23697719 MsG0580025749.01.T01:intron
TTAAAGGAATTCATCCTAAT+TGG 0.227419 5:-23698721 MsG0580025749.01.T01:CDS
TGCTCACTGACCTTGTATTC+TGG 0.268288 5:-23696048 MsG0580025749.01.T01:CDS
CCTTGAGTTATTGGTTGAAT+TGG 0.289568 5:-23698907 MsG0580025749.01.T01:CDS
AATATCCAGACGGAAGTCTT+TGG 0.329675 5:+23696000 None:intergenic
GCATGGAATACATGTGTTAA+AGG 0.347362 5:-23698737 MsG0580025749.01.T01:CDS
ATAATGCACATTCCATGTTA+TGG 0.360858 5:-23694328 MsG0580025749.01.T01:three_prime_UTR
TTCGAAACTCCAACAACTAT+TGG 0.360922 5:+23694181 None:intergenic
GAAACAGAAGGAAGATGCTT+TGG 0.361643 5:+23699643 None:intergenic
CTGTAAGCAAGCAACCAATT+AGG 0.371298 5:+23698707 None:intergenic
CATCACCATATGCACCCTTA+TGG 0.375914 5:-23694835 MsG0580025749.01.T01:CDS
GTTAAAGCAACTTCTATAGA+AGG 0.385635 5:+23697894 None:intergenic
CAGGATTCTCAAGCCAAACT+TGG 0.399849 5:-23698964 MsG0580025749.01.T01:five_prime_UTR
TTAAATATGTAGACTTGTGC+AGG 0.402756 5:-23696079 MsG0580025749.01.T01:intron
TAGAACTTAGAAGCCAAGTT+TGG 0.406459 5:+23698951 None:intergenic
TATGTGGCTCCAACACTTGA+TGG 0.408371 5:-23697826 MsG0580025749.01.T01:CDS
CTGGTTCTTGTCAGTTTCTA+CGG 0.409172 5:-23694252 MsG0580025749.01.T01:three_prime_UTR
TTTGGTCACTATTTACTTTG+CGG 0.416580 5:-23698157 MsG0580025749.01.T01:intron
TCCATGCCGTTGTTTCGCTT+TGG 0.416933 5:-23694965 MsG0580025749.01.T01:intron
TAAGAGTTCGTATGCCAATC+AGG 0.423869 5:-23697779 MsG0580025749.01.T01:CDS
AGCATTAGTCATTCTGTGTA+AGG 0.441761 5:-23694213 MsG0580025749.01.T01:three_prime_UTR
AGTGAAATTAAGATTTAAGA+AGG 0.443913 5:+23699604 None:intergenic
AAACAGAAGGAAGATGCTTT+GGG 0.444641 5:+23699644 None:intergenic
GAACAGATGGACATTTACTT+TGG 0.448713 5:-23698175 MsG0580025749.01.T01:intron
CTTTAACCACAAGGAATTTG+AGG 0.453242 5:-23697878 MsG0580025749.01.T01:CDS
ACTGCTAATATAGTTGTTGA+TGG 0.456333 5:-23698650 MsG0580025749.01.T01:CDS
ACATACCATAAGGGTGCATA+TGG 0.457897 5:+23694830 None:intergenic
TGGCATACGAACTCTTAGAT+AGG 0.475966 5:+23697785 None:intergenic
GACAAATCAAGGAAAGGATA+AGG 0.477562 5:+23694857 None:intergenic
GTTAACGCTGTGCTCCTCCT+TGG 0.480961 5:-23695165 MsG0580025749.01.T01:CDS
TGGTTGTCGAGATTGTTCTC+TGG 0.487176 5:-23694271 MsG0580025749.01.T01:three_prime_UTR
TTTAACCACAAGGAATTTGA+GGG 0.490528 5:-23697877 MsG0580025749.01.T01:CDS
TCGATTGAGAGATTCCTGAT+TGG 0.495840 5:+23697765 None:intergenic
GAATTTAAGAACATACCATA+AGG 0.496201 5:+23694820 None:intergenic
TCGAAATACAGCTGGTGTGT+GGG 0.497509 5:-23697746 MsG0580025749.01.T01:CDS
GGAAGAAGGGCGACGAGAAA+CGG 0.502040 5:-23698783 MsG0580025749.01.T01:CDS
AAGTCTTTGGATGTCATAAA+CGG 0.506515 5:+23696013 None:intergenic
ATGTGGCTCCAACACTTGAT+GGG 0.508289 5:-23697825 MsG0580025749.01.T01:CDS
CATATGGTGATGACAAATCA+AGG 0.512911 5:+23694846 None:intergenic
GACATCCAAAGACTTCCGTC+TGG 0.516324 5:-23696005 MsG0580025749.01.T01:CDS
GAAATGAGAGGGTGGAAGAA+GGG 0.524860 5:-23698796 MsG0580025749.01.T01:CDS
TTGTTGGAGTTTCGAAACCT+TGG 0.526050 5:-23694174 MsG0580025749.01.T01:three_prime_UTR
GTATGGAAAATTTATTACAA+AGG 0.529182 5:+23694099 None:intergenic
AAATAACAAGCCAGAATACA+AGG 0.530867 5:+23696038 None:intergenic
AGAAATGAGAGGGTGGAAGA+AGG 0.535700 5:-23698797 MsG0580025749.01.T01:CDS
TTCAATTTGCAGTTCACCGT+TGG 0.536989 5:-23695198 MsG0580025749.01.T01:intron
AAATATGCAAATCGAAACAC+TGG 0.545569 5:+23695029 None:intergenic
ATCGAAATACAGCTGGTGTG+TGG 0.547035 5:-23697747 MsG0580025749.01.T01:CDS
AGCTTGTTAATGTTAAGTGA+AGG 0.558355 5:-23694047 MsG0580025749.01.T01:three_prime_UTR
GCATTAGTCATTCTGTGTAA+GGG 0.560859 5:-23694212 MsG0580025749.01.T01:three_prime_UTR
TCTCTCAATCGAAATACAGC+TGG 0.561952 5:-23697754 MsG0580025749.01.T01:CDS
GAAGGGCGACGAGAAACGGT+TGG 0.569856 5:-23698779 MsG0580025749.01.T01:CDS
CATTAGTCATTCTGTGTAAG+GGG 0.570552 5:-23694211 MsG0580025749.01.T01:three_prime_UTR
AATATAGTTGTTGATGGAGG+TGG 0.572071 5:-23698644 MsG0580025749.01.T01:CDS
TGCTATATGAAGATGAAGCA+TGG 0.572936 5:-23698754 MsG0580025749.01.T01:CDS
CGTTTCCCTCAAATTCCTTG+TGG 0.579761 5:+23697872 None:intergenic
AATTTAAGAACATACCATAA+GGG 0.580153 5:+23694821 None:intergenic
TCAGAAATCCCATCAAGTGT+TGG 0.581297 5:+23697817 None:intergenic
TACGAACTCTTAGATAGGAC+AGG 0.582195 5:+23697790 None:intergenic
CCAATTCAACCAATAACTCA+AGG 0.587774 5:+23698907 None:intergenic
GGTATTAGTATCTTGTGTCA+TGG 0.591072 5:+23698928 None:intergenic
CGAAATACAGCTGGTGTGTG+GGG 0.596310 5:-23697745 MsG0580025749.01.T01:CDS
GGTGATGACAAATCAAGGAA+AGG 0.602090 5:+23694851 None:intergenic
TAGTGAAGTTGAAGCACTTG+TGG 0.603098 5:-23694291 MsG0580025749.01.T01:three_prime_UTR
TACAGAACGAGGCACTTATG+TGG 0.604278 5:-23697842 MsG0580025749.01.T01:CDS
TCAGTAAATCAAGAAATGAG+AGG 0.605968 5:-23698808 MsG0580025749.01.T01:CDS
CAGTAAATCAAGAAATGAGA+GGG 0.619640 5:-23698807 MsG0580025749.01.T01:CDS
AATGCAAAGAAGCCATAACA+TGG 0.621242 5:+23694316 None:intergenic
AACGTCAATGCAGAAACAGA+AGG 0.637955 5:+23699631 None:intergenic
TAGAAGTTGCTTTAACCACA+AGG 0.639755 5:-23697887 MsG0580025749.01.T01:CDS
TAAATCAAGAAATGAGAGGG+TGG 0.641595 5:-23698804 MsG0580025749.01.T01:CDS
ACCAAAGCGAAACAACGGCA+TGG 0.646417 5:+23694964 None:intergenic
ACACAGAATGACTAATGCTG+TGG 0.647354 5:+23694217 None:intergenic
CGAAACATCATTGAACTGCA+TGG 0.659943 5:-23695142 MsG0580025749.01.T01:intron
AGTTCAATGATGTTTCGCCA+AGG 0.672652 5:+23695148 None:intergenic
TCAATGATGTTTCGCCAAGG+AGG 0.685866 5:+23695151 None:intergenic
GCTAATATAGTTGTTGATGG+AGG 0.698631 5:-23698647 MsG0580025749.01.T01:CDS
GTTAACAGAGTGCATACCAA+CGG 0.699109 5:+23695182 None:intergenic
TTGTACTTACAATATCCAGA+CGG 0.715608 5:+23695990 None:intergenic
AACGCATTAGATACAGAACG+AGG 0.781639 5:-23697853 MsG0580025749.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTCAAATATTATTTC+AGG - Chr5:23695970-23695989 MsG0580025749.01.T01:intron 10.0%
!!! AATATTTCTTTTATTAACTA+TGG - Chr5:23694822-23694841 MsG0580025749.01.T01:CDS 10.0%
!!! ATATATTTTTTTTTAGACAT+TGG - Chr5:23699538-23699557 MsG0580025749.01.T01:intron 10.0%
!!! ATATTTCTTTTATTAACTAT+GGG - Chr5:23694823-23694842 MsG0580025749.01.T01:CDS 10.0%
!!! ATTTCTTTTTTTCTTTAATT+TGG + Chr5:23696262-23696281 None:intergenic 10.0%
!!! TCTAATTTTATAAAAAAATG+TGG + Chr5:23696958-23696977 None:intergenic 10.0%
!!! TTTCTTTTTTTCTTTAATTT+GGG + Chr5:23696261-23696280 None:intergenic 10.0%
!! AAATATATGTCAAATATTAG+AGG + Chr5:23698942-23698961 None:intergenic 15.0%
!! ATAAAGAGAATTTAATTCAA+AGG + Chr5:23694363-23694382 None:intergenic 15.0%
!! TAAAGAGAATTTAATTCAAA+GGG + Chr5:23694362-23694381 None:intergenic 15.0%
!! TATATAATATAACACCTTAA+AGG - Chr5:23696678-23696697 MsG0580025749.01.T01:intron 15.0%
!! TCTAAAAAAAAATATATCCA+AGG + Chr5:23699535-23699554 None:intergenic 15.0%
!! TGAATTAAATTCTCTTTATT+TGG - Chr5:23694364-23694383 MsG0580025749.01.T01:intron 15.0%
!!! AAGATTTTTTTTTTTGAGAA+CGG - Chr5:23696188-23696207 MsG0580025749.01.T01:intron 15.0%
!!! AAGCATATTATTTTTAAATC+TGG - Chr5:23697375-23697394 MsG0580025749.01.T01:intron 15.0%
!!! AATTGTTTTATTGATTGAAA+AGG - Chr5:23696279-23696298 MsG0580025749.01.T01:intron 15.0%
!!! AATTTTATTGTGTTATTAAC+TGG - Chr5:23697546-23697565 MsG0580025749.01.T01:intron 15.0%
!!! AATTTTCAATTAGAACTTAA+AGG + Chr5:23696387-23696406 None:intergenic 15.0%
!!! AGCATATTATTTTTAAATCT+GGG - Chr5:23697376-23697395 MsG0580025749.01.T01:intron 15.0%
!!! ATTACTCTTATTGATTTTAT+TGG - Chr5:23695996-23696015 MsG0580025749.01.T01:intron 15.0%
!!! TTCATTTTTAAAAATCTAAC+TGG + Chr5:23699173-23699192 None:intergenic 15.0%
!!! TTTTCTATAAAAAATGAGTA+TGG + Chr5:23699610-23699629 None:intergenic 15.0%
!! AATAGTATTTGATCAAATCA+TGG - Chr5:23696996-23697015 MsG0580025749.01.T01:intron 20.0%
!! AATTTAAGAACATACCATAA+GGG + Chr5:23698871-23698890 None:intergenic 20.0%
!! AGTGAAATTAAGATTTAAGA+AGG + Chr5:23694088-23694107 None:intergenic 20.0%
!! ATTAATAAGTTGCTAATACT+TGG + Chr5:23694690-23694709 None:intergenic 20.0%
!! CAGCATATTTATAACAAAAA+GGG + Chr5:23695470-23695489 None:intergenic 20.0%
!! CATTAATTACAAATTTCATG+CGG + Chr5:23698312-23698331 None:intergenic 20.0%
!! GGAGGAAAAAAAAAAAAAAT+GGG - Chr5:23696558-23696577 MsG0580025749.01.T01:intron 20.0%
!! GTATGGAAAATTTATTACAA+AGG + Chr5:23699593-23699612 None:intergenic 20.0%
!! TAACCAATGAAATTGTTTAT+TGG + Chr5:23695383-23695402 None:intergenic 20.0%
!! TATGTGCATACATTTAATTA+GGG + Chr5:23697884-23697903 None:intergenic 20.0%
!! TCAGCATATTTATAACAAAA+AGG + Chr5:23695471-23695490 None:intergenic 20.0%
!! TGATATCAATTTCAAAATGA+CGG - Chr5:23695224-23695243 MsG0580025749.01.T01:intron 20.0%
!! TGGAGGAAAAAAAAAAAAAA+TGG - Chr5:23696557-23696576 MsG0580025749.01.T01:intron 20.0%
!! TTGATAAATATAGGCATATT+TGG + Chr5:23694666-23694685 None:intergenic 20.0%
!!! AATTTCTTTTTTTGTGCTTT+TGG - Chr5:23695008-23695027 MsG0580025749.01.T01:CDS 20.0%
!!! ACAGAATTTTGCAAAAATTA+AGG + Chr5:23694264-23694283 None:intergenic 20.0%
!!! AGAATTGATTTTAACATGTT+TGG + Chr5:23698138-23698157 None:intergenic 20.0%
!!! ATACTTGGTTTGATAAATAT+AGG + Chr5:23694675-23694694 None:intergenic 20.0%
!!! ATTAGTTTTGTGAAAGAAAT+TGG - Chr5:23696156-23696175 MsG0580025749.01.T01:intron 20.0%
!!! ATTTCTTTTTTTGTGCTTTT+GGG - Chr5:23695009-23695028 MsG0580025749.01.T01:CDS 20.0%
!!! CTTAATCAATTGATAATTTG+GGG - Chr5:23694334-23694353 MsG0580025749.01.T01:three_prime_UTR 20.0%
!!! GCTTAATCAATTGATAATTT+GGG - Chr5:23694333-23694352 MsG0580025749.01.T01:three_prime_UTR 20.0%
!!! TATATTATCTATTGCTGATT+CGG - Chr5:23699103-23699122 MsG0580025749.01.T01:intron 20.0%
!!! TCATTAACTTTTCATCATTA+AGG + Chr5:23698355-23698374 None:intergenic 20.0%
!!! TGATTTTGTGAAATTGATTA+TGG - Chr5:23697969-23697988 MsG0580025749.01.T01:intron 20.0%
!!! TGCTTAATCAATTGATAATT+TGG - Chr5:23694332-23694351 MsG0580025749.01.T01:three_prime_UTR 20.0%
!!! TTCAAGTATAACTTTTGTTT+AGG - Chr5:23696100-23696119 MsG0580025749.01.T01:intron 20.0%
! AAAAAGAAATTCAACAAAGC+TGG + Chr5:23696886-23696905 None:intergenic 25.0%
! AAAAGCAATAGAAAGAAGAT+GGG + Chr5:23698763-23698782 None:intergenic 25.0%
! AAACATACATGAAAACTGTT+TGG - Chr5:23698201-23698220 MsG0580025749.01.T01:intron 25.0%
! AAAGGAGATATGTTATAGAA+AGG - Chr5:23696297-23696316 MsG0580025749.01.T01:intron 25.0%
! AAATATAGGCATATTTGGAT+TGG + Chr5:23694661-23694680 None:intergenic 25.0%
! AAGACAGCAATATATTATAC+AGG + Chr5:23695112-23695131 None:intergenic 25.0%
! ATACTAATACCTTGAGTTAT+TGG - Chr5:23694773-23694792 MsG0580025749.01.T01:intron 25.0%
! CAATTAGAACTTAAAGGTTT+GGG + Chr5:23696381-23696400 None:intergenic 25.0%
! CATACATTTAATTAGGGATT+AGG + Chr5:23697878-23697897 None:intergenic 25.0%
! CGCATGAAATTTGTAATTAA+TGG - Chr5:23698310-23698329 MsG0580025749.01.T01:intron 25.0%
! CTAACAAAAGATATGTAGAT+TGG - Chr5:23696537-23696556 MsG0580025749.01.T01:intron 25.0%
! CTATGTGCATACATTTAATT+AGG + Chr5:23697885-23697904 None:intergenic 25.0%
! GAATTTAAGAACATACCATA+AGG + Chr5:23698872-23698891 None:intergenic 25.0%
! GGTCTTTATTACAAACAAAA+GGG + Chr5:23696937-23696956 None:intergenic 25.0%
! GTTATTAACTGGTTAAACTT+GGG - Chr5:23697557-23697576 MsG0580025749.01.T01:intron 25.0%
! TAATGTCAACATGAATTAAC+AGG - Chr5:23694706-23694725 MsG0580025749.01.T01:intron 25.0%
! TACATATTATGTTATGGTCT+AGG - Chr5:23699013-23699032 MsG0580025749.01.T01:intron 25.0%
! TAGAAATAGCTTCTACATAA+GGG + Chr5:23694457-23694476 None:intergenic 25.0%
! TCAATTAGAACTTAAAGGTT+TGG + Chr5:23696382-23696401 None:intergenic 25.0%
! TCTTTGCCAAGAAATTTAAT+TGG - Chr5:23697273-23697292 MsG0580025749.01.T01:intron 25.0%
! TGAGAAGAAATATAAGCAAA+AGG + Chr5:23698589-23698608 None:intergenic 25.0%
! TGGTAGTACATATTATGTTA+TGG - Chr5:23699007-23699026 MsG0580025749.01.T01:intron 25.0%
! TGGTCTTTATTACAAACAAA+AGG + Chr5:23696938-23696957 None:intergenic 25.0%
! TGTTATTAACTGGTTAAACT+TGG - Chr5:23697556-23697575 MsG0580025749.01.T01:intron 25.0%
! TTAAAGGAATTCATCCTAAT+TGG - Chr5:23694968-23694987 MsG0580025749.01.T01:CDS 25.0%
! TTAGTAGTTTCATTCTTGTT+TGG - Chr5:23697928-23697947 MsG0580025749.01.T01:intron 25.0%
! TTCTGACCAATTAAATTTCT+TGG + Chr5:23697282-23697301 None:intergenic 25.0%
! TTGATGAATATGAAAAACAG+AGG + Chr5:23694134-23694153 None:intergenic 25.0%
! TTTACTCTGTTTGAAAGAAT+GGG - Chr5:23696651-23696670 MsG0580025749.01.T01:intron 25.0%
!! AATGTATGCACATAGTTTTT+AGG - Chr5:23697890-23697909 MsG0580025749.01.T01:CDS 25.0%
!! ACTGATTAGATAAAGCTTTT+GGG - Chr5:23697779-23697798 MsG0580025749.01.T01:CDS 25.0%
!! ATGTATGCACATAGTTTTTA+GGG - Chr5:23697891-23697910 MsG0580025749.01.T01:CDS 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + Chr5:23694408-23694427 None:intergenic 25.0%
!! ATTTTCTAACCTTTTGTTAC+AGG - Chr5:23698806-23698825 MsG0580025749.01.T01:CDS 25.0%
!! GATTTGCATATTTTATCTTG+TGG - Chr5:23698670-23698689 MsG0580025749.01.T01:CDS 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + Chr5:23694407-23694426 None:intergenic 25.0%
!! TTTTACTCTGTTTGAAAGAA+TGG - Chr5:23696650-23696669 MsG0580025749.01.T01:intron 25.0%
!!! AATAACGGGTTGTTAAAATT+AGG + Chr5:23697075-23697094 None:intergenic 25.0%
!!! ATATTATCTATTGCTGATTC+GGG - Chr5:23699104-23699123 MsG0580025749.01.T01:intron 25.0%
!!! ATTTGAGTATTGATGACTAA+TGG + Chr5:23698894-23698913 None:intergenic 25.0%
!!! GTAATTTTTTTCCTTTTGCA+TGG + Chr5:23698920-23698939 None:intergenic 25.0%
!!! TACTGATTAGATAAAGCTTT+TGG - Chr5:23697778-23697797 MsG0580025749.01.T01:CDS 25.0%
!!! TGCGTTTTTTTCATCTTTTT+GGG - Chr5:23695596-23695615 MsG0580025749.01.T01:intron 25.0%
!!! TGTTCGAATTTTTTGGTATA+TGG + Chr5:23699221-23699240 None:intergenic 25.0%
!!! TTAGCACATTGAAACTTTTT+TGG - Chr5:23698983-23699002 MsG0580025749.01.T01:intron 25.0%
!!! TTCAGTTCTAAAAGAAATGT+CGG - Chr5:23698423-23698442 MsG0580025749.01.T01:intron 25.0%
!!! TTGCGTTTTTTTCATCTTTT+TGG - Chr5:23695595-23695614 MsG0580025749.01.T01:intron 25.0%
AAAAGTTTGTCTGTTTGAGA+TGG - Chr5:23696623-23696642 MsG0580025749.01.T01:intron 30.0%
AAAGCTAGTTGAAACCTTTA+AGG + Chr5:23696695-23696714 None:intergenic 30.0%
AAATAACAAGCCAGAATACA+AGG + Chr5:23697654-23697673 None:intergenic 30.0%
AAATATGCAAATCGAAACAC+TGG + Chr5:23698663-23698682 None:intergenic 30.0%
AAGTAACAGAGACTGAATAA+TGG + Chr5:23697446-23697465 None:intergenic 30.0%
AAGTCTTTGGATGTCATAAA+CGG + Chr5:23697679-23697698 None:intergenic 30.0%
AAGTTAATGAAGATGCAGAA+AGG - Chr5:23698365-23698384 MsG0580025749.01.T01:intron 30.0%
AATTACTTGTATACTCTCGT+TGG - Chr5:23696853-23696872 MsG0580025749.01.T01:intron 30.0%
ACAAAAGATATGTAGATTGG+AGG - Chr5:23696540-23696559 MsG0580025749.01.T01:intron 30.0%
ACAGTGCTATAACGTTATTA+CGG + Chr5:23697142-23697161 None:intergenic 30.0%
ACTGCTAATATAGTTGTTGA+TGG - Chr5:23695039-23695058 MsG0580025749.01.T01:intron 30.0%
AGAACGGATATAATTGAAGA+TGG - Chr5:23696204-23696223 MsG0580025749.01.T01:intron 30.0%
AGAATCAACAGAAAAAGAAG+AGG - Chr5:23697843-23697862 MsG0580025749.01.T01:CDS 30.0%
AGATATCGGAAGAAAAAAAG+TGG + Chr5:23697186-23697205 None:intergenic 30.0%
AGTAAGTAACTAAACTTCCA+AGG - Chr5:23695182-23695201 MsG0580025749.01.T01:CDS 30.0%
ATAATGCACATTCCATGTTA+TGG - Chr5:23699361-23699380 MsG0580025749.01.T01:intron 30.0%
ATGTTTGGATCAGTGATATA+GGG - Chr5:23699128-23699147 MsG0580025749.01.T01:intron 30.0%
ATTCTGCTATATGCTTAGAT+TGG - Chr5:23697234-23697253 MsG0580025749.01.T01:intron 30.0%
CAATGAAATTGTTTATTGGC+TGG + Chr5:23695379-23695398 None:intergenic 30.0%
CAGCCAATAAACAATTTCAT+TGG - Chr5:23695377-23695396 MsG0580025749.01.T01:intron 30.0%
CAGTAAATCAAGAAATGAGA+GGG - Chr5:23694882-23694901 MsG0580025749.01.T01:intron 30.0%
CAGTGACTCAAACTTATTAA+GGG - Chr5:23696826-23696845 MsG0580025749.01.T01:intron 30.0%
CCAAATTGCTTACTTAAGAT+GGG + Chr5:23694186-23694205 None:intergenic 30.0%
CCATCTTAAGTAAGCAATTT+GGG - Chr5:23694184-23694203 MsG0580025749.01.T01:three_prime_UTR 30.0%
CTAGAAATAGCTTCTACATA+AGG + Chr5:23694458-23694477 None:intergenic 30.0%
GAAAAGCAATAGAAAGAAGA+TGG + Chr5:23698764-23698783 None:intergenic 30.0%
GCATACAAATTTATGAACCT+TGG + Chr5:23695202-23695221 None:intergenic 30.0%
GCCTAAAAATCAAATTGTAG+AGG - Chr5:23698065-23698084 MsG0580025749.01.T01:intron 30.0%
GCTGAAATTGAAATTAAGAG+TGG + Chr5:23695760-23695779 None:intergenic 30.0%
GTGTCAGAATTTATCATTGA+TGG - Chr5:23696720-23696739 MsG0580025749.01.T01:intron 30.0%
GTTAAAGCAACTTCTATAGA+AGG + Chr5:23695798-23695817 None:intergenic 30.0%
GTTATTATTTCATGGCATTG+TGG + Chr5:23695286-23695305 None:intergenic 30.0%
TATGTTCATATACTCCATAG+AGG - Chr5:23695667-23695686 MsG0580025749.01.T01:intron 30.0%
TATGTTTGGATCAGTGATAT+AGG - Chr5:23699127-23699146 MsG0580025749.01.T01:intron 30.0%
TCAGTAAATCAAGAAATGAG+AGG - Chr5:23694881-23694900 MsG0580025749.01.T01:intron 30.0%
TCAGTGACTCAAACTTATTA+AGG - Chr5:23696825-23696844 MsG0580025749.01.T01:intron 30.0%
TGAAAGAGATAAAAGCTGAT+AGG - Chr5:23696233-23696252 MsG0580025749.01.T01:intron 30.0%
TGATTATGGCTAAAAGTGAT+TGG - Chr5:23697983-23698002 MsG0580025749.01.T01:intron 30.0%
TGTGATTTCTTCATTTGGTT+GGG - Chr5:23697740-23697759 MsG0580025749.01.T01:CDS 30.0%
TTAAATATGTAGACTTGTGC+AGG - Chr5:23697610-23697629 MsG0580025749.01.T01:intron 30.0%
TTGAACTGATACAAGTTTGT+TGG - Chr5:23699303-23699322 MsG0580025749.01.T01:intron 30.0%
TTGTACTTACAATATCCAGA+CGG + Chr5:23697702-23697721 None:intergenic 30.0%
TTTAACCACAAGGAATTTGA+GGG - Chr5:23695812-23695831 MsG0580025749.01.T01:intron 30.0%
TTTGGTCACTATTTACTTTG+CGG - Chr5:23695532-23695551 MsG0580025749.01.T01:intron 30.0%
! AAAGGGAAAGTACAACTAAA+AGG + Chr5:23696920-23696939 None:intergenic 30.0%
! CATATCTTTTGTTAGAAACC+CGG + Chr5:23696532-23696551 None:intergenic 30.0%
! CTGATTAGATAAAGCTTTTG+GGG - Chr5:23697780-23697799 MsG0580025749.01.T01:CDS 30.0%
! CTTTTATTAACTATGGGCTT+AGG - Chr5:23694829-23694848 MsG0580025749.01.T01:CDS 30.0%
! TATCAGCTTTTATCTCTTTC+AGG + Chr5:23696234-23696253 None:intergenic 30.0%
! TGCATATTTTATCTTGTGGA+CGG - Chr5:23698674-23698693 MsG0580025749.01.T01:CDS 30.0%
! TGTCGTGTGTTATTATTTCA+TGG + Chr5:23695294-23695313 None:intergenic 30.0%
!! ACAACTTAATTTGCAGCTTA+TGG - Chr5:23694418-23694437 MsG0580025749.01.T01:intron 30.0%
!! AGCTTGTTAATGTTAAGTGA+AGG - Chr5:23699642-23699661 MsG0580025749.01.T01:five_prime_UTR 30.0%
!! CTACATTTGTGATTTTTCAG+TGG - Chr5:23698697-23698716 MsG0580025749.01.T01:CDS 30.0%
!! GCCTCTACAATTTGATTTTT+AGG + Chr5:23698069-23698088 None:intergenic 30.0%
!! GCTTAGGATCATTTTTGATA+TGG - Chr5:23694845-23694864 MsG0580025749.01.T01:CDS 30.0%
!! TCTTTCTATTGCTTTTCAGT+TGG - Chr5:23698767-23698786 MsG0580025749.01.T01:CDS 30.0%
!!! AGGTTTCAACTAGCTTTTTA+AGG - Chr5:23696698-23696717 MsG0580025749.01.T01:intron 30.0%
!!! CGTTTTTTTCATCTTTTTGG+GGG - Chr5:23695598-23695617 MsG0580025749.01.T01:intron 30.0%
!!! GCGTTTTTTTCATCTTTTTG+GGG - Chr5:23695597-23695616 MsG0580025749.01.T01:intron 30.0%
!!! GTTTTTTTCATCTTTTTGGG+GGG - Chr5:23695599-23695618 MsG0580025749.01.T01:intron 30.0%
!!! TCGAATTTTTTGGTATATGG+TGG + Chr5:23699218-23699237 None:intergenic 30.0%
!!! TTCATTCTTGTTTGGTTTTG+CGG - Chr5:23697936-23697955 MsG0580025749.01.T01:intron 30.0%
AAAAATTCGAACACACCCTA+AGG - Chr5:23699228-23699247 MsG0580025749.01.T01:intron 35.0%
AAACAGAAGGAAGATGCTTT+GGG + Chr5:23694048-23694067 None:intergenic 35.0%
AAGCAACTTCACAAAACACA+TGG + Chr5:23694317-23694336 None:intergenic 35.0%
AAGCACAAATGCTTTCATGT+TGG + Chr5:23698263-23698282 None:intergenic 35.0%
AAGTAAATGTCCATCTGTTC+AGG + Chr5:23695514-23695533 None:intergenic 35.0%
AAGTGTGCTAAATAAGGAGT+CGG + Chr5:23696491-23696510 None:intergenic 35.0%
AATGCAAAGAAGCCATAACA+TGG + Chr5:23699376-23699395 None:intergenic 35.0%
ACTCAAATACACCATGCAAA+AGG - Chr5:23698906-23698925 MsG0580025749.01.T01:CDS 35.0%
AGAGAGTTAGAGAAGTGAAA+TGG + Chr5:23695560-23695579 None:intergenic 35.0%
AGCATTAGTCATTCTGTGTA+AGG - Chr5:23699476-23699495 MsG0580025749.01.T01:intron 35.0%
ATTAACTGGTTAAACTTGGG+AGG - Chr5:23697560-23697579 MsG0580025749.01.T01:intron 35.0%
CAAACACGTAATTGAGAATG+TGG - Chr5:23695320-23695339 MsG0580025749.01.T01:intron 35.0%
CAACCAAATGAAGAAATCAC+AGG + Chr5:23697741-23697760 None:intergenic 35.0%
CATAACCAATTGTTGCCTTA+GGG + Chr5:23699246-23699265 None:intergenic 35.0%
CATACATGAAAACTGTTTGG+AGG - Chr5:23698204-23698223 MsG0580025749.01.T01:intron 35.0%
CATTAGTCATTCTGTGTAAG+GGG - Chr5:23699478-23699497 MsG0580025749.01.T01:intron 35.0%
CATTCTCAATTACGTGTTTG+TGG + Chr5:23695320-23695339 None:intergenic 35.0%
CCAATTCAACCAATAACTCA+AGG + Chr5:23694785-23694804 None:intergenic 35.0%
CCCAAATTGCTTACTTAAGA+TGG + Chr5:23694187-23694206 None:intergenic 35.0%
CCCATCTTAAGTAAGCAATT+TGG - Chr5:23694183-23694202 MsG0580025749.01.T01:three_prime_UTR 35.0%
CGCATATTGCAGAACAATAA+CGG + Chr5:23697090-23697109 None:intergenic 35.0%
CTGTGATTTCTTCATTTGGT+TGG - Chr5:23697739-23697758 MsG0580025749.01.T01:CDS 35.0%
CTTCATTCAAATAGTTGACC+AGG + Chr5:23697323-23697342 None:intergenic 35.0%
CTTTAACCACAAGGAATTTG+AGG - Chr5:23695811-23695830 MsG0580025749.01.T01:intron 35.0%
GAAAAACAAAGTCGATGAAC+AGG + Chr5:23695704-23695723 None:intergenic 35.0%
GAACAGATGGACATTTACTT+TGG - Chr5:23695514-23695533 MsG0580025749.01.T01:intron 35.0%
GACAAATCAAGGAAAGGATA+AGG + Chr5:23698835-23698854 None:intergenic 35.0%
GCATATTGCAGAACAATAAC+GGG + Chr5:23697089-23697108 None:intergenic 35.0%
GCATGGAATACATGTGTTAA+AGG - Chr5:23694952-23694971 MsG0580025749.01.T01:intron 35.0%
GCATTAGTCATTCTGTGTAA+GGG - Chr5:23699477-23699496 MsG0580025749.01.T01:intron 35.0%
GCTATAGTACTTTAGTGTAG+CGG + Chr5:23695262-23695281 None:intergenic 35.0%
GGAAAAAAATGTACGTAGCA+AGG - Chr5:23699663-23699682 MsG0580025749.01.T01:five_prime_UTR 35.0%
GGAAAAACACCAATAGTTGT+TGG - Chr5:23699499-23699518 MsG0580025749.01.T01:intron 35.0%
GGATCTAGTTGTTACAATAC+TGG - Chr5:23696741-23696760 MsG0580025749.01.T01:intron 35.0%
GGTATTAGTATCTTGTGTCA+TGG + Chr5:23694764-23694783 None:intergenic 35.0%
GTGTTGTAAATCGCAGATAT+CGG + Chr5:23697200-23697219 None:intergenic 35.0%
TAAATCAAGAAATGAGAGGG+TGG - Chr5:23694885-23694904 MsG0580025749.01.T01:intron 35.0%
TAGAACTTAGAAGCCAAGTT+TGG + Chr5:23694741-23694760 None:intergenic 35.0%
TATCTGCGATTTACAACACT+TGG - Chr5:23697201-23697220 MsG0580025749.01.T01:intron 35.0%
TCAGGAGCCAAAAAAAGAAA+GGG + Chr5:23695496-23695515 None:intergenic 35.0%
TCATAACCAATTGTTGCCTT+AGG + Chr5:23699247-23699266 None:intergenic 35.0%
TGATATAGGGTGGAATGAAA+TGG - Chr5:23699141-23699160 MsG0580025749.01.T01:intron 35.0%
TGCTATATGAAGATGAAGCA+TGG - Chr5:23694935-23694954 MsG0580025749.01.T01:intron 35.0%
TGTTGACAAAGACTCAAAGT+TGG + Chr5:23696066-23696085 None:intergenic 35.0%
TTACAACACTTGGCTGAAAA+AGG - Chr5:23697211-23697230 MsG0580025749.01.T01:intron 35.0%
TTCAGGAGCCAAAAAAAGAA+AGG + Chr5:23695497-23695516 None:intergenic 35.0%
TTCGAAACTCCAACAACTAT+TGG + Chr5:23699511-23699530 None:intergenic 35.0%
! AATATAGTTGTTGATGGAGG+TGG - Chr5:23695045-23695064 MsG0580025749.01.T01:intron 35.0%
! CATATGGTGATGACAAATCA+AGG + Chr5:23698846-23698865 None:intergenic 35.0%
! CCTTATTTAGCACACTTGTT+GGG - Chr5:23696494-23696513 MsG0580025749.01.T01:intron 35.0%
! CCTTGAGTTATTGGTTGAAT+TGG - Chr5:23694782-23694801 MsG0580025749.01.T01:intron 35.0%
! GATAATTAGTCTCTTCTCTG+AGG + Chr5:23696352-23696371 None:intergenic 35.0%
! GCTAATATAGTTGTTGATGG+AGG - Chr5:23695042-23695061 MsG0580025749.01.T01:intron 35.0%
! GTTTTACCAAAGCGAAACAA+CGG + Chr5:23698733-23698752 None:intergenic 35.0%
! TAGAAGTTGCTTTAACCACA+AGG - Chr5:23695802-23695821 MsG0580025749.01.T01:intron 35.0%
! TCCTTATTTAGCACACTTGT+TGG - Chr5:23696493-23696512 MsG0580025749.01.T01:intron 35.0%
! TGTATGTTTGCTTCCACTTT+TGG + Chr5:23698190-23698209 None:intergenic 35.0%
! TGTTTATTGGCTGGAAAACA+CGG + Chr5:23695370-23695389 None:intergenic 35.0%
! TTCTAACCTTTTGTTACAGG+TGG - Chr5:23698809-23698828 MsG0580025749.01.T01:CDS 35.0%
!! ACATAGTTTTTAGGGACTGT+TGG - Chr5:23697899-23697918 MsG0580025749.01.T01:CDS 35.0%
!! GTATGTTTGCTTCCACTTTT+GGG + Chr5:23698189-23698208 None:intergenic 35.0%
!! TATGTTTGCTTCCACTTTTG+GGG + Chr5:23698188-23698207 None:intergenic 35.0%
!! TTGTTGGACTTTTAGGTACT+TGG - Chr5:23699330-23699349 MsG0580025749.01.T01:intron 35.0%
!!! CACATTGAAACTTTTTTGGC+TGG - Chr5:23698987-23699006 MsG0580025749.01.T01:intron 35.0%
!!! GCTGATTCCCTTTCTTTTTT+TGG - Chr5:23695486-23695505 MsG0580025749.01.T01:intron 35.0%
!!! TAGGGTGTGTTCGAATTTTT+TGG + Chr5:23699228-23699247 None:intergenic 35.0%
AAATGAAGAAATCACAGGCC+AGG + Chr5:23697736-23697755 None:intergenic 40.0%
AACGCATTAGATACAGAACG+AGG - Chr5:23695836-23695855 MsG0580025749.01.T01:intron 40.0%
AACGTCAATGCAGAAACAGA+AGG + Chr5:23694061-23694080 None:intergenic 40.0%
AATATCCAGACGGAAGTCTT+TGG + Chr5:23697692-23697711 None:intergenic 40.0%
AATGAAGAAATCACAGGCCA+GGG + Chr5:23697735-23697754 None:intergenic 40.0%
ACACAGAATGACTAATGCTG+TGG + Chr5:23699475-23699494 None:intergenic 40.0%
AGAACCGTCAATATACGAAG+AGG + Chr5:23696435-23696454 None:intergenic 40.0%
AGGTTCATCAGTTTCCTCTA+TGG + Chr5:23695684-23695703 None:intergenic 40.0%
AGTACAACTGATCTTATCCC+TGG - Chr5:23697715-23697734 MsG0580025749.01.T01:intron 40.0%
AGTTCAATGATGTTTCGCCA+AGG + Chr5:23698544-23698563 None:intergenic 40.0%
AGTTGTGATCTAGGGATACA+AGG + Chr5:23696329-23696348 None:intergenic 40.0%
ATAAGGCCACCTGTAACAAA+AGG + Chr5:23698818-23698837 None:intergenic 40.0%
ATGCCCTCTTCGTATATTGA+CGG - Chr5:23696428-23696447 MsG0580025749.01.T01:intron 40.0%
CAAACAGGGCTAATATAGCT+AGG + Chr5:23694393-23694412 None:intergenic 40.0%
CCCAACAAGTGTGCTAAATA+AGG + Chr5:23696497-23696516 None:intergenic 40.0%
CGAAACATCATTGAACTGCA+TGG - Chr5:23698547-23698566 MsG0580025749.01.T01:intron 40.0%
CTAGCTATATTAGCCCTGTT+TGG - Chr5:23694391-23694410 MsG0580025749.01.T01:intron 40.0%
CTGTAAGCAAGCAACCAATT+AGG + Chr5:23694985-23695004 None:intergenic 40.0%
GAAACAGAAGGAAGATGCTT+TGG + Chr5:23694049-23694068 None:intergenic 40.0%
GAACCGTCAATATACGAAGA+GGG + Chr5:23696434-23696453 None:intergenic 40.0%
GAAGATGCAGAAAGGTGAAT+AGG - Chr5:23698373-23698392 MsG0580025749.01.T01:intron 40.0%
GGTGATGACAAATCAAGGAA+AGG + Chr5:23698841-23698860 None:intergenic 40.0%
GTTAACAGAGTGCATACCAA+CGG + Chr5:23698510-23698529 None:intergenic 40.0%
TAAGAGTTCGTATGCCAATC+AGG - Chr5:23695910-23695929 MsG0580025749.01.T01:intron 40.0%
TACGAACTCTTAGATAGGAC+AGG + Chr5:23695902-23695921 None:intergenic 40.0%
TCAGAAATCCCATCAAGTGT+TGG + Chr5:23695875-23695894 None:intergenic 40.0%
TCGATTGAGAGATTCCTGAT+TGG + Chr5:23695927-23695946 None:intergenic 40.0%
TCTCTCAATCGAAATACAGC+TGG - Chr5:23695935-23695954 MsG0580025749.01.T01:intron 40.0%
TGGCATACGAACTCTTAGAT+AGG + Chr5:23695907-23695926 None:intergenic 40.0%
TGGCCTGTGATTTCTTCATT+TGG - Chr5:23697735-23697754 MsG0580025749.01.T01:CDS 40.0%
TTAGGACATTGGTAGACATC+TGG - Chr5:23696787-23696806 MsG0580025749.01.T01:intron 40.0%
TTCAATTTGCAGTTCACCGT+TGG - Chr5:23698491-23698510 MsG0580025749.01.T01:intron 40.0%
TTGTTGGAGTTTCGAAACCT+TGG - Chr5:23699515-23699534 MsG0580025749.01.T01:intron 40.0%
TTTATTACCTCCCCCAAAAG+TGG - Chr5:23698174-23698193 MsG0580025749.01.T01:intron 40.0%
TTTGGATCAGTGATATAGGG+TGG - Chr5:23699131-23699150 MsG0580025749.01.T01:intron 40.0%
! AATGACCAGTAGTTTGCAGA+AGG - Chr5:23697420-23697439 MsG0580025749.01.T01:intron 40.0%
! ACATACCATAAGGGTGCATA+TGG + Chr5:23698862-23698881 None:intergenic 40.0%
! CTGGTTCTTGTCAGTTTCTA+CGG - Chr5:23699437-23699456 MsG0580025749.01.T01:intron 40.0%
! CTTGATGTTGCTGTTGCATT+AGG - Chr5:23696769-23696788 MsG0580025749.01.T01:intron 40.0%
! GTCGGTTACATTTGCTAATC+TGG + Chr5:23696473-23696492 None:intergenic 40.0%
! TAGTGAAGTTGAAGCACTTG+TGG - Chr5:23699398-23699417 MsG0580025749.01.T01:intron 40.0%
! TGGCATCTTGTTGGACTTTT+AGG - Chr5:23699323-23699342 MsG0580025749.01.T01:intron 40.0%
! TTGCTGTTGCATTAGGACAT+TGG - Chr5:23696776-23696795 MsG0580025749.01.T01:intron 40.0%
!! ACTTTTAGGTACTTGGCTGT+TGG - Chr5:23699337-23699356 MsG0580025749.01.T01:intron 40.0%
!! ATGTTTGCTTCCACTTTTGG+GGG + Chr5:23698187-23698206 None:intergenic 40.0%
!! ATTGCTGATTCGGGTATGTT+TGG - Chr5:23699113-23699132 MsG0580025749.01.T01:intron 40.0%
!! CAAGTTTGTTGGCATCTTGT+TGG - Chr5:23699314-23699333 MsG0580025749.01.T01:intron 40.0%
!! CTAATCTGGCAAGTTTGTTG+AGG + Chr5:23696459-23696478 None:intergenic 40.0%
!! TAAAGCTTTTGGGGACTGTT+CGG - Chr5:23697789-23697808 MsG0580025749.01.T01:CDS 40.0%
!! TTTCATCTTTTTGGGGGGTA+GGG - Chr5:23695604-23695623 MsG0580025749.01.T01:intron 40.0%
!! TTTTCATCTTTTTGGGGGGT+AGG - Chr5:23695603-23695622 MsG0580025749.01.T01:intron 40.0%
!!! TTTTTTGGCTCCTGAACAGA+TGG - Chr5:23695501-23695520 MsG0580025749.01.T01:intron 40.0%
AATGGCCTTCTGCAAACTAC+TGG + Chr5:23697428-23697447 None:intergenic 45.0%
ACACACCCTAAGGCAACAAT+TGG - Chr5:23699238-23699257 MsG0580025749.01.T01:intron 45.0%
AGAAATGAGAGGGTGGAAGA+AGG - Chr5:23694892-23694911 MsG0580025749.01.T01:intron 45.0%
ATCGAAATACAGCTGGTGTG+TGG - Chr5:23695942-23695961 MsG0580025749.01.T01:intron 45.0%
ATGTGGCTCCAACACTTGAT+GGG - Chr5:23695864-23695883 MsG0580025749.01.T01:intron 45.0%
CAGGATTCTCAAGCCAAACT+TGG - Chr5:23694725-23694744 MsG0580025749.01.T01:intron 45.0%
CATCACCATATGCACCCTTA+TGG - Chr5:23698854-23698873 MsG0580025749.01.T01:CDS 45.0%
CCAGGACTTTCTGATCTAGA+AGG + Chr5:23697305-23697324 None:intergenic 45.0%
CCTTCTAGATCAGAAAGTCC+TGG - Chr5:23697302-23697321 MsG0580025749.01.T01:intron 45.0%
CGTTTCCCTCAAATTCCTTG+TGG + Chr5:23695820-23695839 None:intergenic 45.0%
GAAATGAGAGGGTGGAAGAA+GGG - Chr5:23694893-23694912 MsG0580025749.01.T01:intron 45.0%
GAGTGGAAGTCACTTAGAGA+AGG + Chr5:23695743-23695762 None:intergenic 45.0%
GTCAATATACGAAGAGGGCA+TGG + Chr5:23696429-23696448 None:intergenic 45.0%
TAGTCAATGTCTAGCACAGG+CGG + Chr5:23698289-23698308 None:intergenic 45.0%
TATGTGGCTCCAACACTTGA+TGG - Chr5:23695863-23695882 MsG0580025749.01.T01:intron 45.0%
TCAATGATGTTTCGCCAAGG+AGG + Chr5:23698541-23698560 None:intergenic 45.0%
TCGAAATACAGCTGGTGTGT+GGG - Chr5:23695943-23695962 MsG0580025749.01.T01:intron 45.0%
TGCTCACTGACCTTGTATTC+TGG - Chr5:23697641-23697660 MsG0580025749.01.T01:intron 45.0%
TGGTTGTCGAGATTGTTCTC+TGG - Chr5:23699418-23699437 MsG0580025749.01.T01:intron 45.0%
! CTCTGAGGAGTTGTGATCTA+GGG + Chr5:23696337-23696356 None:intergenic 45.0%
! TACAGAACGAGGCACTTATG+TGG - Chr5:23695847-23695866 MsG0580025749.01.T01:intron 45.0%
! TCTCTGAGGAGTTGTGATCT+AGG + Chr5:23696338-23696357 None:intergenic 45.0%
! TTAGCACACTTGTTGGGCTT+AGG - Chr5:23696500-23696519 MsG0580025749.01.T01:intron 45.0%
!! ATAAAATATTTATGAAATAA+AGG - Chr5:23694551-23694570 MsG0580025749.01.T01:intron 5.0%
ACCAAAGCGAAACAACGGCA+TGG + Chr5:23698728-23698747 None:intergenic 50.0%
AGTCAATGTCTAGCACAGGC+GGG + Chr5:23698288-23698307 None:intergenic 50.0%
CGAAATACAGCTGGTGTGTG+GGG - Chr5:23695944-23695963 MsG0580025749.01.T01:intron 50.0%
CGGTAGTCAATGTCTAGCAC+AGG + Chr5:23698292-23698311 None:intergenic 50.0%
GACATCCAAAGACTTCCGTC+TGG - Chr5:23697684-23697703 MsG0580025749.01.T01:intron 50.0%
TGTTGGGCTTAGGCACAAAC+CGG - Chr5:23696510-23696529 MsG0580025749.01.T01:intron 50.0%
! ATACGAAGAGGGCATGGTGA+AGG + Chr5:23696423-23696442 None:intergenic 50.0%
! TACGAAGAGGGCATGGTGAA+GGG + Chr5:23696422-23696441 None:intergenic 50.0%
! TCCATGCCGTTGTTTCGCTT+TGG - Chr5:23698724-23698743 MsG0580025749.01.T01:CDS 50.0%
!! TTTGCTTCCACTTTTGGGGG+AGG + Chr5:23698184-23698203 None:intergenic 50.0%
GGAAGAAGGGCGACGAGAAA+CGG - Chr5:23694906-23694925 MsG0580025749.01.T01:intron 55.0%
GTTAACGCTGTGCTCCTCCT+TGG - Chr5:23698524-23698543 MsG0580025749.01.T01:intron 55.0%
GTTGGGCTTAGGCACAAACC+GGG - Chr5:23696511-23696530 MsG0580025749.01.T01:intron 55.0%
TTGGGGGGTAGGGTGGAATT+TGG - Chr5:23695614-23695633 MsG0580025749.01.T01:intron 55.0%
!! CATCTTTTTGGGGGGTAGGG+TGG - Chr5:23695607-23695626 MsG0580025749.01.T01:intron 55.0%
GAAGGGCGACGAGAAACGGT+TGG - Chr5:23694910-23694929 MsG0580025749.01.T01:intron 60.0%
! GAAGAGGGCATGGTGAAGGG+AGG + Chr5:23696419-23696438 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 23694018 23699693 23694018 ID=MsG0580025749.01;Name=MsG0580025749.01
Chr5 mRNA 23694018 23699693 23694018 ID=MsG0580025749.01.T01;Parent=MsG0580025749.01;Name=MsG0580025749.01.T01;_AED=0.39;_eAED=0.39;_QI=133|0.87|0.88|1|0.75|0.55|9|348|296
Chr5 exon 23694018 23694366 23694018 ID=MsG0580025749.01.T01:exon:4475;Parent=MsG0580025749.01.T01
Chr5 exon 23694815 23694883 23694815 ID=MsG0580025749.01.T01:exon:4474;Parent=MsG0580025749.01.T01
Chr5 exon 23694966 23695057 23694966 ID=MsG0580025749.01.T01:exon:4473;Parent=MsG0580025749.01.T01
Chr5 exon 23695143 23695208 23695143 ID=MsG0580025749.01.T01:exon:4472;Parent=MsG0580025749.01.T01
Chr5 exon 23696000 23696089 23696000 ID=MsG0580025749.01.T01:exon:4471;Parent=MsG0580025749.01.T01
Chr5 exon 23697720 23697932 23697720 ID=MsG0580025749.01.T01:exon:4470;Parent=MsG0580025749.01.T01
Chr5 exon 23698158 23698191 23698158 ID=MsG0580025749.01.T01:exon:4469;Parent=MsG0580025749.01.T01
Chr5 exon 23698623 23698983 23698623 ID=MsG0580025749.01.T01:exon:4468;Parent=MsG0580025749.01.T01
Chr5 exon 23699596 23699693 23699596 ID=MsG0580025749.01.T01:exon:4467;Parent=MsG0580025749.01.T01
Chr5 five_prime_UTR 23699596 23699693 23699596 ID=MsG0580025749.01.T01:five_prime_utr;Parent=MsG0580025749.01.T01
Chr5 five_prime_UTR 23698949 23698983 23698949 ID=MsG0580025749.01.T01:five_prime_utr;Parent=MsG0580025749.01.T01
Chr5 CDS 23698623 23698948 23698623 ID=MsG0580025749.01.T01:cds;Parent=MsG0580025749.01.T01
Chr5 CDS 23698158 23698191 23698158 ID=MsG0580025749.01.T01:cds;Parent=MsG0580025749.01.T01
Chr5 CDS 23697720 23697932 23697720 ID=MsG0580025749.01.T01:cds;Parent=MsG0580025749.01.T01
Chr5 CDS 23696000 23696089 23696000 ID=MsG0580025749.01.T01:cds;Parent=MsG0580025749.01.T01
Chr5 CDS 23695143 23695208 23695143 ID=MsG0580025749.01.T01:cds;Parent=MsG0580025749.01.T01
Chr5 CDS 23694966 23695057 23694966 ID=MsG0580025749.01.T01:cds;Parent=MsG0580025749.01.T01
Chr5 CDS 23694815 23694883 23694815 ID=MsG0580025749.01.T01:cds;Parent=MsG0580025749.01.T01
Chr5 CDS 23694366 23694366 23694366 ID=MsG0580025749.01.T01:cds;Parent=MsG0580025749.01.T01
Chr5 three_prime_UTR 23694018 23694365 23694018 ID=MsG0580025749.01.T01:three_prime_utr;Parent=MsG0580025749.01.T01
Gene Sequence

>MsG0580025749.01.T01

ATGACACAAGATACTAATACCTTGAGTTATTGGTTGAATTGGAGATTCTTCATATGTGCAATATTTCTTTTATTAACTATGGGCTTAGGATCATTTTTGATATGGAAGTATGAAGAATTCAGTAAATCAAGAAATGAGAGGGTGGAAGAAGGGCGACGAGAAACGGTTGGATTGCTATATGAAGATGAAGCATGGAATACATGTGTTAAAGGAATTCATCCTAATTGGTTGCTTGCTTACAGAATAATTTCTTTTTTTGTGCTTTTGGGTTTGCTCACTGCTAATATAGTTGTTGATGGAGGTGGCATTTTTTACTTCTACACTCAATGGACATTTACTTTGGTCACTATTTACTTTGCGCTTGCATCTTGTTTTTCCTTCTATAGAAGTTGCTTTAACCACAAGGAATTTGAGGGAAACGCATTAGATACAGAACGAGGCACTTATGTGGCTCCAACACTTGATGGGATTTCTGATATACCTGTCCTATCTAAGAGTTCGTATGCCAATCAGGAATCTCTCAATCGAAATACAGCTGGTGTGTGGGGTTATATTATTCAAATATTATTTCAGACTTGTGCAGGTGCTGCAATGCTCACTGACCTTGTATTCTGGCTTGTTATTTATCCGTTTATGACATCCAAAGACTTCCGTCTGGATATTTTCACCGTTGGTATGCACTCTGTTAACGCTGTGCTCCTCCTTGGCGAAACATCATTGAACTGCATGAGCTTTCCAGTGTTTCGATTTGCATATTTTATCTTGTGGACGGCTACATTTGTGATTTTTCAGTGGATCGTCCATGCCGTTGTTTCGCTTTGGTGGCCTTATCCTTTCCTTGATTTGTCATCACCATATGCACCCTTATGGTATGTTCTTAAATTCCATTAG

Protein sequence

>MsG0580025749.01.T01

MTQDTNTLSYWLNWRFFICAIFLLLTMGLGSFLIWKYEEFSKSRNERVEEGRRETVGLLYEDEAWNTCVKGIHPNWLLAYRIISFFVLLGLLTANIVVDGGGIFYFYTQWTFTLVTIYFALASCFSFYRSCFNHKEFEGNALDTERGTYVAPTLDGISDIPVLSKSSYANQESLNRNTAGVWGYIIQILFQTCAGAAMLTDLVFWLVIYPFMTSKDFRLDIFTVGMHSVNAVLLLGETSLNCMSFPVFRFAYFILWTATFVIFQWIVHAVVSLWWPYPFLDLSSPYAPLWYVLKFH*