AlfalfaGEDB | MsG0880046461.01

M. sativa cultivar ZhongmuNo.1 / MsG0880046461.01

KEGG: K00026
GO: GO:0003824 GO:0005975 GO:0006099 GO:0016491 GO:0016616 GO:0030060 GO:0055114
PFAM: PF00056 PF02866

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046461.01.T01	AAB99757.1	100	408	0	0	1	408	1	408	0	828

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046461.01.T01	Q9SN86	77.309	379	76	4	20	398	23	391	0	573

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046461.01.T01	O48906	100.000	408	0	0	1	408	1	408	0.0	828

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0780041076.01	MsG0880046461.01	0.810285	1.243635e-50	7.465953e-48

PPI

Gene1	Gene2	Type
MsG0480022584.01	MsG0880046461.01	PPI
MsG0480022584.01	MsG0880046461.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046461.01.T01	MTR_5g014710	64.968	314	108	1	90	403	47	358	6.10e-146	419
MsG0880046461.01.T01	MTR_4g092690	65.079	315	108	1	89	403	44	356	1.57e-141	407
MsG0880046461.01.T01	MTR_8g463760	60.121	331	126	3	77	403	15	343	1.92e-139	402
MsG0880046461.01.T01	MTR_8g463760	63.547	203	71	1	77	276	15	217	3.78e-88	268
MsG0880046461.01.T01	MTR_2g021700	72.549	51	14	0	256	306	52	102	4.06e-16	75.5
MsG0880046461.01.T01	MTR_2g045010	72.549	51	14	0	256	306	52	102	4.06e-16	75.5
MsG0880046461.01.T01	MTR_4g033285	73.333	45	12	0	256	300	52	96	1.45e-13	66.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0880046461.01.T01	AT3G47520	77.309	379	76	4	20	398	23	391	0.0	573
MsG0880046461.01.T01	AT1G53240	64.537	313	109	1	91	403	31	341	2.81e-144	414
MsG0880046461.01.T01	AT2G22780	63.609	327	117	1	77	403	30	354	1.17e-143	413
MsG0880046461.01.T01	AT3G15020	63.259	313	113	1	91	403	31	341	1.53e-140	404
MsG0880046461.01.T01	AT5G09660	60.870	345	129	3	63	403	12	354	1.70e-135	392
MsG0880046461.01.T01	AT5G09660	64.762	315	109	1	89	403	21	333	4.01e-135	390
MsG0880046461.01.T01	AT5G09660	60.580	345	129	4	63	403	12	353	3.66e-133	386
MsG0880046461.01.T01	AT3G15020	64.338	272	97	0	91	362	31	302	1.02e-124	363
MsG0880046461.01.T01	AT5G09660	63.322	289	102	2	63	347	12	300	6.63e-117	345
MsG0880046461.01.T01	AT5G09660	68.605	258	81	0	90	347	22	279	2.12e-116	343
MsG0880046461.01.T01	AT3G53910	49.438	89	45	0	318	406	9	97	2.58e-26	102

Find 107 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTCCTCAATCTAGTCCTTT+TGG	0.231181	8:-73636433	MsG0880046461.01.T01:CDS
CAACACCCCTTCGAAAGTTT+TGG	0.243573	8:-73636083	MsG0880046461.01.T01:CDS
GAAACACCAAAGAGCTTCTT+AGG	0.295270	8:+73635809	None:intergenic
GCAAGTTGCGGGTGAGGTTT+CGG	0.332641	8:+73636260	None:intergenic
GAGGAAGTGACCTCCCTGTT+TGG	0.346298	8:+73636449	None:intergenic
GTTAATTTCAACACCTTCTC+TGG	0.351785	8:-73636391	MsG0880046461.01.T01:CDS
ACTATTGGAACCACCCAAAC+AGG	0.361628	8:-73636463	MsG0880046461.01.T01:CDS
TCGATGCTGGCCTTAAGTTC+TGG	0.369041	8:+73635329	None:intergenic
AGGAAGTGACCTCCCTGTTT+GGG	0.375677	8:+73636450	None:intergenic
TCTCATCAAGATGTCGCCTT+TGG	0.378753	8:-73636170	MsG0880046461.01.T01:CDS
CTTGGTGCTGCAGGAGGGAT+TGG	0.382446	8:-73636208	MsG0880046461.01.T01:CDS
ATAATATGAATAAAAGCATT+GGG	0.384767	8:+73635899	None:intergenic
TGAGTATGAGCAGAAGGCTT+TGG	0.385556	8:-73635363	MsG0880046461.01.T01:CDS
CGAGTCATGCCGGGCTTCCT+AGG	0.395727	8:+73635989	None:intergenic
TATGATATTGCGAATGTTAA+GGG	0.396701	8:-73636130	MsG0880046461.01.T01:CDS
TTTAGAATTTCAGCGGCAAT+AGG	0.400849	8:+73635851	None:intergenic
CTATGATATTGCGAATGTTA+AGG	0.401378	8:-73636131	MsG0880046461.01.T01:CDS
TCCTACAAAGTAGCGGTTCT+TGG	0.402994	8:-73636226	MsG0880046461.01.T01:CDS
GTTGAGGCGAAGGCTGGTGC+AGG	0.406244	8:-73635584	MsG0880046461.01.T01:CDS
TGCCTGAGGCTGCAAGTTGC+GGG	0.408008	8:+73636249	None:intergenic
TCGTCTCTTCGTGCACTTGA+CGG	0.411087	8:-73635515	MsG0880046461.01.T01:CDS
CAGTTGTTGGAGGTCATGCC+GGG	0.417388	8:-73635712	MsG0880046461.01.T01:CDS
ACCAAGAACCGCTACTTTGT+AGG	0.417991	8:+73636225	None:intergenic
CACCCGCAACTTGCAGCCTC+AGG	0.423294	8:-73636251	MsG0880046461.01.T01:CDS
CCGGCATGACCTCCAACAAC+TGG	0.427912	8:+73635713	None:intergenic
ACATCAATGCTGGTATAGTC+AGG	0.428901	8:-73635952	MsG0880046461.01.T01:CDS
TTATCCCTGCTGGTGTTCCT+AGG	0.429918	8:-73636006	MsG0880046461.01.T01:CDS
GGCTTCCTAGGAACACCAGC+AGG	0.432243	8:+73636001	None:intergenic
AGCACTTAAGCCAGAACTTA+AGG	0.432437	8:-73635339	MsG0880046461.01.T01:CDS
TGAGAGATGGCATGGCTTTG+AGG	0.432465	8:+73636368	None:intergenic
TATGATCCTAAGAAGCTCTT+TGG	0.434339	8:-73635815	MsG0880046461.01.T01:CDS
AGGGTCTGCTACTTTGTCAA+TGG	0.435055	8:-73635564	MsG0880046461.01.T01:CDS
GAGGCTGCAAGTTGCGGGTG+AGG	0.436560	8:+73636254	None:intergenic
GATGTGGATGTTCCAGTTGT+TGG	0.440014	8:-73635725	MsG0880046461.01.T01:CDS
GTAGCGGTTCTTGGTGCTGC+AGG	0.442098	8:-73636217	MsG0880046461.01.T01:CDS
CTCAATCCTTGGAGATCAGT+TGG	0.450054	8:+73635386	None:intergenic
GATAATATGAATAAAAGCAT+TGG	0.454366	8:+73635898	None:intergenic
CCAGTTGTTGGAGGTCATGC+CGG	0.456311	8:-73635713	MsG0880046461.01.T01:CDS
GACTCTGAATCATCTTTCTC+TGG	0.457426	8:-73636340	MsG0880046461.01.T01:CDS
TTTCACTGATGAAGAAATTG+AGG	0.470058	8:-73635645	MsG0880046461.01.T01:CDS
ATGCCTGAGGCTGCAAGTTG+CGG	0.479068	8:+73636248	None:intergenic
GCTCATACTCACTCAATCCT+TGG	0.489832	8:+73635375	None:intergenic
GATGTTGTTGTTATCCCTGC+TGG	0.490735	8:-73636016	MsG0880046461.01.T01:CDS
GAATTGAATTTCAAACCAAA+AGG	0.499197	8:+73636418	None:intergenic
TGGTTTGAAATTCAATTCCC+AGG	0.499844	8:-73636413	MsG0880046461.01.T01:CDS
CTTCAAGGGTGAAGATTGGT+AGG	0.501008	8:-73635430	MsG0880046461.01.T01:CDS
TACCAGCATTGATGTTGAAA+AGG	0.504347	8:+73635960	None:intergenic
TTTGCTTCAAGGGTGAAGAT+TGG	0.507205	8:-73635434	MsG0880046461.01.T01:CDS
GAGTTAGCAAATTGTTTGAA+AGG	0.510601	8:-73636043	MsG0880046461.01.T01:CDS
AAGGTCGTCACGAGTCATGC+CGG	0.512854	8:+73635979	None:intergenic
AAACCAAAAGGACTAGATTG+AGG	0.513013	8:+73636430	None:intergenic
TCGCAATATCATAGAGATGC+AGG	0.515907	8:+73636140	None:intergenic
AGCAAATTGTTTGAAAGGTG+TGG	0.519677	8:-73636038	MsG0880046461.01.T01:CDS
ATAGGAACTGTAGAGTTCAC+TGG	0.520893	8:+73635869	None:intergenic
CGCTGAAATTCTAAAACAGA+AGG	0.523131	8:-73635843	MsG0880046461.01.T01:CDS
AGGAGGGATTGGTCAGCCAC+TGG	0.524866	8:-73636197	MsG0880046461.01.T01:CDS
TGCTGGTATAGTCAGGGACT+TGG	0.529987	8:-73635945	MsG0880046461.01.T01:CDS
GTGGATGTTCCAGTTGTTGG+AGG	0.532818	8:-73635722	MsG0880046461.01.T01:CDS
GCGGTTCTTGGTGCTGCAGG+AGG	0.533048	8:-73636214	MsG0880046461.01.T01:CDS
GTGAAATCCAAAACTTTCGA+AGG	0.537192	8:+73636076	None:intergenic
ACTGTCAGGATTCAAAATGC+TGG	0.538512	8:-73635617	MsG0880046461.01.T01:CDS
AGGTCGTCACGAGTCATGCC+GGG	0.542713	8:+73635980	None:intergenic
AGGGTGAAGATTGGTAGGAA+AGG	0.542764	8:-73635425	MsG0880046461.01.T01:CDS
AAGTGACCTCCCTGTTTGGG+TGG	0.544528	8:+73636453	None:intergenic
GAGAGGAAGAATTGTAATCC+CGG	0.547677	8:+73635694	None:intergenic
AGAAGGTGTTGAAATTAACC+TGG	0.550640	8:+73636395	None:intergenic
TTTCTACACTTGATGTTGTG+AGG	0.552915	8:-73635790	MsG0880046461.01.T01:CDS
GAGGTTGTTGAGGCGAAGGC+TGG	0.553690	8:-73635590	MsG0880046461.01.T01:CDS
ATTGAGTGAGTATGAGCAGA+AGG	0.555968	8:-73635369	MsG0880046461.01.T01:CDS
AACTGAGGTTGTTGAGGCGA+AGG	0.556107	8:-73635594	MsG0880046461.01.T01:CDS
TTAATTCCAACTGATCTCCA+AGG	0.558509	8:-73635392	MsG0880046461.01.T01:CDS
GCTGGTGTTCCTAGGAAGCC+CGG	0.561452	8:-73635998	MsG0880046461.01.T01:CDS
CTTAAGGCCAGCATCGAGAA+GGG	0.563554	8:-73635323	MsG0880046461.01.T01:CDS
TCATCAGTGAAACTCACTGA+GGG	0.567339	8:+73635656	None:intergenic
AAATTGAGGAGCTAACTGTC+AGG	0.577890	8:-73635631	MsG0880046461.01.T01:CDS
GTCACATCTGAGAGATGGCA+TGG	0.579241	8:+73636360	None:intergenic
ACTTAAGGCCAGCATCGAGA+AGG	0.580005	8:-73635324	MsG0880046461.01.T01:CDS
GATTCAAAATGCTGGAACTG+AGG	0.580164	8:-73635609	MsG0880046461.01.T01:CDS
CGGTTCTTGGTGCTGCAGGA+GGG	0.586824	8:-73636213	MsG0880046461.01.T01:CDS
GAACCTGAGGTTGATTGATG+TGG	0.587092	8:-73635741	MsG0880046461.01.T01:CDS
TTCTACACTTGATGTTGTGA+GGG	0.588106	8:-73635789	MsG0880046461.01.T01:CDS
CATCCACATCAATCAACCTC+AGG	0.589306	8:+73635738	None:intergenic
TGAAATCCAAAACTTTCGAA+GGG	0.589668	8:+73636077	None:intergenic
CATGGCTTTGAGGCCAGAGA+AGG	0.592005	8:+73636378	None:intergenic
TCAGAGTCACATCTGAGAGA+TGG	0.601214	8:+73636355	None:intergenic
TTGAGGCGAAGGCTGGTGCA+GGG	0.614890	8:-73635583	MsG0880046461.01.T01:CDS
TGCTGGAACTGAGGTTGTTG+AGG	0.616411	8:-73635600	MsG0880046461.01.T01:CDS
ATTGGGGCAATTATCTGCAA+CGG	0.623966	8:+73635916	None:intergenic
TTGCTCAGAAGAAGAACCTG+AGG	0.625392	8:-73635754	MsG0880046461.01.T01:CDS
CATCAATGCTGGTATAGTCA+GGG	0.635474	8:-73635951	MsG0880046461.01.T01:CDS
CTATTGGAACCACCCAAACA+GGG	0.635885	8:-73636462	MsG0880046461.01.T01:CDS
AGATGCAGGTCGGAAACCAA+AGG	0.636274	8:+73636154	None:intergenic
TGCAAAAGTTGCACGCAGAG+CGG	0.636866	8:+73636303	None:intergenic
GAAGGTGTTGAAATTAACCT+GGG	0.642084	8:+73636396	None:intergenic
GCTGAAATTCTAAAACAGAA+GGG	0.647110	8:-73635842	MsG0880046461.01.T01:CDS
TTAAGGCCAGCATCGAGAAG+GGG	0.649629	8:-73635322	MsG0880046461.01.T01:CDS
TAAGGCCAGCATCGAGAAGG+GGG	0.655068	8:-73635321	MsG0880046461.01.T01:CDS
TAATATGAATAAAAGCATTG+GGG	0.668981	8:+73635900	None:intergenic
GATTGGTAGGAAAGGAGTCG+AGG	0.670539	8:-73635417	MsG0880046461.01.T01:CDS
GCTTCCTAGGAACACCAGCA+GGG	0.676922	8:+73636002	None:intergenic
TTCATCAGTGAAACTCACTG+AGG	0.681230	8:+73635655	None:intergenic
TCAGGCATCCTACAAAGTAG+CGG	0.690931	8:-73636233	MsG0880046461.01.T01:CDS
GAAATCCAAAACTTTCGAAG+GGG	0.694170	8:+73636078	None:intergenic
AATATCATAGAGATGCAGGT+CGG	0.697174	8:+73636144	None:intergenic
GCTACTTTGTAGGATGCCTG+AGG	0.706674	8:+73636235	None:intergenic
ATCTTGATGAGAAGTGCCAG+TGG	0.724135	8:+73636181	None:intergenic
TTGGAACCACCCAAACAGGG+AGG	0.754881	8:-73636459	MsG0880046461.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATAATATGAATAAAAGCATT+GGG	+	Chr8:73635880-73635899	None:intergenic	15.0%
!!!	GATAATATGAATAAAAGCAT+TGG	+	Chr8:73635881-73635900	None:intergenic	20.0%
!!!	TAATATGAATAAAAGCATTG+GGG	+	Chr8:73635879-73635898	None:intergenic	20.0%
!	GAATTGAATTTCAAACCAAA+AGG	+	Chr8:73635361-73635380	None:intergenic	25.0%
!	TATGATATTGCGAATGTTAA+GGG	-	Chr8:73635646-73635665	MsG0880046461.01.T01:CDS	25.0%
	CTATGATATTGCGAATGTTA+AGG	-	Chr8:73635645-73635664	MsG0880046461.01.T01:CDS	30.0%
	GAGTTAGCAAATTGTTTGAA+AGG	-	Chr8:73635733-73635752	MsG0880046461.01.T01:CDS	30.0%
	TGAAATCCAAAACTTTCGAA+GGG	+	Chr8:73635702-73635721	None:intergenic	30.0%
	TTTCACTGATGAAGAAATTG+AGG	-	Chr8:73636131-73636150	MsG0880046461.01.T01:CDS	30.0%
!!	GCTGAAATTCTAAAACAGAA+GGG	-	Chr8:73635934-73635953	MsG0880046461.01.T01:CDS	30.0%
!!!	CTTCTGTTTTAGAATTTCAG+CGG	+	Chr8:73635935-73635954	None:intergenic	30.0%
	AAACCAAAAGGACTAGATTG+AGG	+	Chr8:73635349-73635368	None:intergenic	35.0%
	AATATCATAGAGATGCAGGT+CGG	+	Chr8:73635635-73635654	None:intergenic	35.0%
	AGCAAATTGTTTGAAAGGTG+TGG	-	Chr8:73635738-73635757	MsG0880046461.01.T01:CDS	35.0%
	GAAATCCAAAACTTTCGAAG+GGG	+	Chr8:73635701-73635720	None:intergenic	35.0%
	GTGAAATCCAAAACTTTCGA+AGG	+	Chr8:73635703-73635722	None:intergenic	35.0%
	GTTAATTTCAACACCTTCTC+TGG	-	Chr8:73635385-73635404	MsG0880046461.01.T01:CDS	35.0%
	TATGATCCTAAGAAGCTCTT+TGG	-	Chr8:73635961-73635980	MsG0880046461.01.T01:CDS	35.0%
	TTAATTCCAACTGATCTCCA+AGG	-	Chr8:73636384-73636403	MsG0880046461.01.T01:CDS	35.0%
	TTCACCCTTGAAGCAAAAAA+CGG	+	Chr8:73636339-73636358	None:intergenic	35.0%
	TTCTACACTTGATGTTGTGA+GGG	-	Chr8:73635987-73636006	MsG0880046461.01.T01:CDS	35.0%
	TTTCTACACTTGATGTTGTG+AGG	-	Chr8:73635986-73636005	MsG0880046461.01.T01:CDS	35.0%
!	TGGTTTGAAATTCAATTCCC+AGG	-	Chr8:73635363-73635382	MsG0880046461.01.T01:CDS	35.0%
!	TTTAGAATTTCAGCGGCAAT+AGG	+	Chr8:73635928-73635947	None:intergenic	35.0%
!!	AGAAGGTGTTGAAATTAACC+TGG	+	Chr8:73635384-73635403	None:intergenic	35.0%
!!	CGCTGAAATTCTAAAACAGA+AGG	-	Chr8:73635933-73635952	MsG0880046461.01.T01:CDS	35.0%
!!	GAAGGTGTTGAAATTAACCT+GGG	+	Chr8:73635383-73635402	None:intergenic	35.0%
!!	TACCAGCATTGATGTTGAAA+AGG	+	Chr8:73635819-73635838	None:intergenic	35.0%
!!!	GCATCAGCTACTTTTACTAT+TGG	-	Chr8:73635298-73635317	MsG0880046461.01.T01:CDS	35.0%
!!!	TCGAAAGTTTTGGATTTCAC+AGG	-	Chr8:73635703-73635722	MsG0880046461.01.T01:CDS	35.0%
	AAATTGAGGAGCTAACTGTC+AGG	-	Chr8:73636145-73636164	MsG0880046461.01.T01:CDS	40.0%
	ACATCAATGCTGGTATAGTC+AGG	-	Chr8:73635824-73635843	MsG0880046461.01.T01:CDS	40.0%
	ACTGTCAGGATTCAAAATGC+TGG	-	Chr8:73636159-73636178	MsG0880046461.01.T01:CDS	40.0%
	AGCACTTAAGCCAGAACTTA+AGG	-	Chr8:73636437-73636456	MsG0880046461.01.T01:CDS	40.0%
	ATAGGAACTGTAGAGTTCAC+TGG	+	Chr8:73635910-73635929	None:intergenic	40.0%
	ATTGAGTGAGTATGAGCAGA+AGG	-	Chr8:73636407-73636426	MsG0880046461.01.T01:CDS	40.0%
	ATTGGGGCAATTATCTGCAA+CGG	+	Chr8:73635863-73635882	None:intergenic	40.0%
	CATCAATGCTGGTATAGTCA+GGG	-	Chr8:73635825-73635844	MsG0880046461.01.T01:CDS	40.0%
	GAAACACCAAAGAGCTTCTT+AGG	+	Chr8:73635970-73635989	None:intergenic	40.0%
	GACTCTGAATCATCTTTCTC+TGG	-	Chr8:73635436-73635455	MsG0880046461.01.T01:CDS	40.0%
	GAGAGGAAGAATTGTAATCC+CGG	+	Chr8:73636085-73636104	None:intergenic	40.0%
	GATTCAAAATGCTGGAACTG+AGG	-	Chr8:73636167-73636186	MsG0880046461.01.T01:CDS	40.0%
	TCATCAGTGAAACTCACTGA+GGG	+	Chr8:73636123-73636142	None:intergenic	40.0%
	TCGCAATATCATAGAGATGC+AGG	+	Chr8:73635639-73635658	None:intergenic	40.0%
	TGAAGCAAAAAACGGAAGGT+CGG	+	Chr8:73636331-73636350	None:intergenic	40.0%
	TTCATCAGTGAAACTCACTG+AGG	+	Chr8:73636124-73636143	None:intergenic	40.0%
	TTTGCTTCAAGGGTGAAGAT+TGG	-	Chr8:73636342-73636361	MsG0880046461.01.T01:CDS	40.0%
!	CGGTTTTCCTTTTGAGCTTT+GGG	+	Chr8:73635499-73635518	None:intergenic	40.0%
!	CTTCCTCAATCTAGTCCTTT+TGG	-	Chr8:73635343-73635362	MsG0880046461.01.T01:CDS	40.0%
!	GACCTTTTCAACATCAATGC+TGG	-	Chr8:73635814-73635833	MsG0880046461.01.T01:CDS	40.0%
!	TCGGTTTTCCTTTTGAGCTT+TGG	+	Chr8:73635500-73635519	None:intergenic	40.0%
!	TTTTGCACCCAAAGCTCAAA+AGG	-	Chr8:73635489-73635508	MsG0880046461.01.T01:CDS	40.0%
!!	GGTTTTGTCTTTGACAAGAG+AGG	+	Chr8:73636102-73636121	None:intergenic	40.0%
!!!	ACCTTCCGTTTTTTGCTTCA+AGG	-	Chr8:73636331-73636350	MsG0880046461.01.T01:CDS	40.0%
!!!	CCTTCCGTTTTTTGCTTCAA+GGG	-	Chr8:73636332-73636351	MsG0880046461.01.T01:CDS	40.0%
	ACTATTGGAACCACCCAAAC+AGG	-	Chr8:73635313-73635332	MsG0880046461.01.T01:CDS	45.0%
	AGGGTGAAGATTGGTAGGAA+AGG	-	Chr8:73636351-73636370	MsG0880046461.01.T01:CDS	45.0%
	CATCCACATCAATCAACCTC+AGG	+	Chr8:73636041-73636060	None:intergenic	45.0%
	CCCTTGAAGCAAAAAACGGA+AGG	+	Chr8:73636335-73636354	None:intergenic	45.0%
	CTATTGGAACCACCCAAACA+GGG	-	Chr8:73635314-73635333	MsG0880046461.01.T01:CDS	45.0%
	CTCAATCCTTGGAGATCAGT+TGG	+	Chr8:73636393-73636412	None:intergenic	45.0%
	CTTCAAGGGTGAAGATTGGT+AGG	-	Chr8:73636346-73636365	MsG0880046461.01.T01:CDS	45.0%
	GATGTGGATGTTCCAGTTGT+TGG	-	Chr8:73636051-73636070	MsG0880046461.01.T01:CDS	45.0%
	GCTCATACTCACTCAATCCT+TGG	+	Chr8:73636404-73636423	None:intergenic	45.0%
	TCAGAGTCACATCTGAGAGA+TGG	+	Chr8:73635424-73635443	None:intergenic	45.0%
	TCAGGCATCCTACAAAGTAG+CGG	-	Chr8:73635543-73635562	MsG0880046461.01.T01:CDS	45.0%
	TCCTACAAAGTAGCGGTTCT+TGG	-	Chr8:73635550-73635569	MsG0880046461.01.T01:CDS	45.0%
	TCTCATCAAGATGTCGCCTT+TGG	-	Chr8:73635606-73635625	MsG0880046461.01.T01:CDS	45.0%
	TGAGTATGAGCAGAAGGCTT+TGG	-	Chr8:73636413-73636432	MsG0880046461.01.T01:CDS	45.0%
	TTGCTCAGAAGAAGAACCTG+AGG	-	Chr8:73636022-73636041	MsG0880046461.01.T01:CDS	45.0%
!	ACCAAGAACCGCTACTTTGT+AGG	+	Chr8:73635554-73635573	None:intergenic	45.0%
!	CAACACCCCTTCGAAAGTTT+TGG	-	Chr8:73635693-73635712	MsG0880046461.01.T01:CDS	45.0%
!	GAACCTGAGGTTGATTGATG+TGG	-	Chr8:73636035-73636054	MsG0880046461.01.T01:CDS	45.0%
!	GATGTTGTTGTTATCCCTGC+TGG	-	Chr8:73635760-73635779	MsG0880046461.01.T01:CDS	45.0%
!!	AGGGTCTGCTACTTTGTCAA+TGG	-	Chr8:73636212-73636231	MsG0880046461.01.T01:CDS	45.0%
!!	ATCTTGATGAGAAGTGCCAG+TGG	+	Chr8:73635598-73635617	None:intergenic	45.0%
	AACTGAGGTTGTTGAGGCGA+AGG	-	Chr8:73636182-73636201	MsG0880046461.01.T01:CDS	50.0%
	AGATGCAGGTCGGAAACCAA+AGG	+	Chr8:73635625-73635644	None:intergenic	50.0%
	AGGAAGTGACCTCCCTGTTT+GGG	+	Chr8:73635329-73635348	None:intergenic	50.0%
	GATTGGTAGGAAAGGAGTCG+AGG	-	Chr8:73636359-73636378	MsG0880046461.01.T01:CDS	50.0%
	GTCACATCTGAGAGATGGCA+TGG	+	Chr8:73635419-73635438	None:intergenic	50.0%
	GTGGATGTTCCAGTTGTTGG+AGG	-	Chr8:73636054-73636073	MsG0880046461.01.T01:CDS	50.0%
	TCGTCTCTTCGTGCACTTGA+CGG	-	Chr8:73636261-73636280	MsG0880046461.01.T01:CDS	50.0%
	TGCAAAAGTTGCACGCAGAG+CGG	+	Chr8:73635476-73635495	None:intergenic	50.0%
	TGCTGGAACTGAGGTTGTTG+AGG	-	Chr8:73636176-73636195	MsG0880046461.01.T01:CDS	50.0%
	TGCTGGTATAGTCAGGGACT+TGG	-	Chr8:73635831-73635850	MsG0880046461.01.T01:CDS	50.0%
	TTATCCCTGCTGGTGTTCCT+AGG	-	Chr8:73635770-73635789	MsG0880046461.01.T01:CDS	50.0%
!	ACTTAAGGCCAGCATCGAGA+AGG	-	Chr8:73636452-73636471	MsG0880046461.01.T01:CDS	50.0%
!	CTTAAGGCCAGCATCGAGAA+GGG	-	Chr8:73636453-73636472	MsG0880046461.01.T01:CDS	50.0%
!	GCTACTTTGTAGGATGCCTG+AGG	+	Chr8:73635544-73635563	None:intergenic	50.0%
!	TGAGAGATGGCATGGCTTTG+AGG	+	Chr8:73635411-73635430	None:intergenic	50.0%
!	TTAAGGCCAGCATCGAGAAG+GGG	-	Chr8:73636454-73636473	MsG0880046461.01.T01:CDS	50.0%
!!	TCGATGCTGGCCTTAAGTTC+TGG	+	Chr8:73636450-73636469	None:intergenic	50.0%
	AAGGTCGTCACGAGTCATGC+CGG	+	Chr8:73635800-73635819	None:intergenic	55.0%
	AAGTGACCTCCCTGTTTGGG+TGG	+	Chr8:73635326-73635345	None:intergenic	55.0%
	ATGCCTGAGGCTGCAAGTTG+CGG	+	Chr8:73635531-73635550	None:intergenic	55.0%
	CAGTTGTTGGAGGTCATGCC+GGG	-	Chr8:73636064-73636083	MsG0880046461.01.T01:CDS	55.0%
	CCAGTTGTTGGAGGTCATGC+CGG	-	Chr8:73636063-73636082	MsG0880046461.01.T01:CDS	55.0%
	GAGGAAGTGACCTCCCTGTT+TGG	+	Chr8:73635330-73635349	None:intergenic	55.0%
	GCAAGTTGCGGGTGAGGTTT+CGG	+	Chr8:73635519-73635538	None:intergenic	55.0%
	GCTTCCTAGGAACACCAGCA+GGG	+	Chr8:73635777-73635796	None:intergenic	55.0%
	TTGGAACCACCCAAACAGGG+AGG	-	Chr8:73635317-73635336	MsG0880046461.01.T01:CDS	55.0%
!	TAAGGCCAGCATCGAGAAGG+GGG	-	Chr8:73636455-73636474	MsG0880046461.01.T01:CDS	55.0%
!!	CATGGCTTTGAGGCCAGAGA+AGG	+	Chr8:73635401-73635420	None:intergenic	55.0%
	AGCAACCCCCTTCTCGATGC+TGG	+	Chr8:73636463-73636482	None:intergenic	60.0%
	AGGTCGTCACGAGTCATGCC+GGG	+	Chr8:73635799-73635818	None:intergenic	60.0%
	CCGGCATGACCTCCAACAAC+TGG	+	Chr8:73636066-73636085	None:intergenic	60.0%
	GAGGTTGTTGAGGCGAAGGC+TGG	-	Chr8:73636186-73636205	MsG0880046461.01.T01:CDS	60.0%
	GCTGGTGTTCCTAGGAAGCC+CGG	-	Chr8:73635778-73635797	MsG0880046461.01.T01:CDS	60.0%
	GGCTTCCTAGGAACACCAGC+AGG	+	Chr8:73635778-73635797	None:intergenic	60.0%
	TGCCTGAGGCTGCAAGTTGC+GGG	+	Chr8:73635530-73635549	None:intergenic	60.0%
	TTGAGGCGAAGGCTGGTGCA+GGG	-	Chr8:73636193-73636212	MsG0880046461.01.T01:CDS	60.0%
!!	AGGAGGGATTGGTCAGCCAC+TGG	-	Chr8:73635579-73635598	MsG0880046461.01.T01:CDS	60.0%
!!	CGGTTCTTGGTGCTGCAGGA+GGG	-	Chr8:73635563-73635582	MsG0880046461.01.T01:CDS	60.0%
!!	CTTGGTGCTGCAGGAGGGAT+TGG	-	Chr8:73635568-73635587	MsG0880046461.01.T01:CDS	60.0%
!!	GTAGCGGTTCTTGGTGCTGC+AGG	-	Chr8:73635559-73635578	MsG0880046461.01.T01:CDS	60.0%
	CACCCGCAACTTGCAGCCTC+AGG	-	Chr8:73635525-73635544	MsG0880046461.01.T01:CDS	65.0%
	CGAGTCATGCCGGGCTTCCT+AGG	+	Chr8:73635790-73635809	None:intergenic	65.0%
	GAGGCTGCAAGTTGCGGGTG+AGG	+	Chr8:73635525-73635544	None:intergenic	65.0%
	GTTGAGGCGAAGGCTGGTGC+AGG	-	Chr8:73636192-73636211	MsG0880046461.01.T01:CDS	65.0%
!!	GCGGTTCTTGGTGCTGCAGG+AGG	-	Chr8:73635562-73635581	MsG0880046461.01.T01:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr8	gene	73635286	73636512	73635286	ID=MsG0880046461.01;Name=MsG0880046461.01
Chr8	mRNA	73635286	73636512	73635286	ID=MsG0880046461.01.T01;Parent=MsG0880046461.01;Name=MsG0880046461.01.T01;_AED=0.49;_eAED=0.49;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|408
Chr8	exon	73635286	73636512	73635286	ID=MsG0880046461.01.T01:exon:23805;Parent=MsG0880046461.01.T01
Chr8	CDS	73635286	73636512	73635286	ID=MsG0880046461.01.T01:cds;Parent=MsG0880046461.01.T01

Gene Sequence

>MsG0880046461.01.T01

ATGGCGGCAGCAGCATCAGCTACTTTTACTATTGGAACCACCCAAACAGGGAGGTCACTTCCTCAATCTAGTCCTTTTGGTTTGAAATTCAATTCCCAGGTTAATTTCAACACCTTCTCTGGCCTCAAAGCCATGCCATCTCTCAGATGTGACTCTGAATCATCTTTCTCTGGCAAAGAAACTTGTGCCGCTCTGCGTGCAACTTTTGCACCCAAAGCTCAAAAGGAAAACCGAAACCTCACCCGCAACTTGCAGCCTCAGGCATCCTACAAAGTAGCGGTTCTTGGTGCTGCAGGAGGGATTGGTCAGCCACTGGCACTTCTCATCAAGATGTCGCCTTTGGTTTCCGACCTGCATCTCTATGATATTGCGAATGTTAAGGGAGTTGCTGCTGATATCAGTCATTGCAACACCCCTTCGAAAGTTTTGGATTTCACAGGTGCTTCTGAGTTAGCAAATTGTTTGAAAGGTGTGGATGTTGTTGTTATCCCTGCTGGTGTTCCTAGGAAGCCCGGCATGACTCGTGACGACCTTTTCAACATCAATGCTGGTATAGTCAGGGACTTGGTCACTGCCGTTGCAGATAATTGCCCCAATGCTTTTATTCATATTATCAGTAATCCAGTGAACTCTACAGTTCCTATTGCCGCTGAAATTCTAAAACAGAAGGGTGTCTATGATCCTAAGAAGCTCTTTGGTGTTTCTACACTTGATGTTGTGAGGGCAAACACATTTGTTGCTCAGAAGAAGAACCTGAGGTTGATTGATGTGGATGTTCCAGTTGTTGGAGGTCATGCCGGGATTACAATTCTTCCTCTCTTGTCAAAGACAAAACCCTCAGTGAGTTTCACTGATGAAGAAATTGAGGAGCTAACTGTCAGGATTCAAAATGCTGGAACTGAGGTTGTTGAGGCGAAGGCTGGTGCAGGGTCTGCTACTTTGTCAATGGCTTATGCAGCAGCAAGATTTGTTGAATCGTCTCTTCGTGCACTTGACGGAGACGCTGATGTGTATGAGTGCTCATTCGTACAGTCAGATCTGACCGACCTTCCGTTTTTTGCTTCAAGGGTGAAGATTGGTAGGAAAGGAGTCGAGGCTTTAATTCCAACTGATCTCCAAGGATTGAGTGAGTATGAGCAGAAGGCTTTGGAAGCACTTAAGCCAGAACTTAAGGCCAGCATCGAGAAGGGGGTTGCTTTTGCTCAAAAGCAAACTGTTACTGCTTAG

Protein sequence

>MsG0880046461.01.T01

MAAAASATFTIGTTQTGRSLPQSSPFGLKFNSQVNFNTFSGLKAMPSLRCDSESSFSGKETCAALRATFAPKAQKENRNLTRNLQPQASYKVAVLGAAGGIGQPLALLIKMSPLVSDLHLYDIANVKGVAADISHCNTPSKVLDFTGASELANCLKGVDVVVIPAGVPRKPGMTRDDLFNINAGIVRDLVTAVADNCPNAFIHIISNPVNSTVPIAAEILKQKGVYDPKKLFGVSTLDVVRANTFVAQKKNLRLIDVDVPVVGGHAGITILPLLSKTKPSVSFTDEEIEELTVRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDADVYECSFVQSDLTDLPFFASRVKIGRKGVEALIPTDLQGLSEYEQKALEALKPELKASIEKGVAFAQKQTVTA*