AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041076.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041076.01.T01 MTR_7g103620 95.721 444 14 1 1 439 1 444 0.0 867
MsG0780041076.01.T01 MTR_7g103620 94.987 379 14 1 66 439 16 394 0.0 738
MsG0780041076.01.T01 MTR_6g060570 80.674 445 63 3 1 439 2 429 0.0 734
MsG0780041076.01.T01 MTR_2g056190 66.210 438 135 7 2 435 63 491 0.0 578
MsG0780041076.01.T01 MTR_5g096970 57.763 438 169 7 2 433 45 472 2.93e-173 494
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041076.01.T01 AT2G36530 85.811 444 58 1 1 439 1 444 0.0 787
MsG0780041076.01.T01 AT2G36530 85.782 422 55 1 23 439 12 433 0.0 746
MsG0780041076.01.T01 AT1G74030 65.596 436 137 6 4 435 51 477 0.0 576
MsG0780041076.01.T01 AT2G29560 55.936 438 177 7 2 433 45 472 4.25e-167 478

Find 156 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGCATATGCAGGAGTTTA+TGG 0.174723 7:+86157438 MsG0780041076.01.T01:intron
TAATTAGACGTCATAAAATT+TGG 0.221935 7:+86160099 MsG0780041076.01.T01:three_prime_UTR
TTCAACTGAACTGTGTTATT+AGG 0.234362 7:-86160416 None:intergenic
AAACAACAGGTCAACCAAAT+TGG 0.247163 7:+86159102 MsG0780041076.01.T01:intron
GTTACTACTCAACTGAAAAT+TGG 0.253970 7:-86159950 None:intergenic
TCTCAGTCACGGATCCAATT+TGG 0.266564 7:-86159116 None:intergenic
AAATATGTGGTTGGGTGTTT+AGG 0.286685 7:+86160318 MsG0780041076.01.T01:three_prime_UTR
ATAAAATTTGGTCATGCATT+AGG 0.291097 7:+86160111 MsG0780041076.01.T01:three_prime_UTR
CCCGCTTTCAATGTGATTAA+TGG 0.296494 7:+86157311 MsG0780041076.01.T01:CDS
TGCAAGAGACACTGCTAATA+TGG 0.297215 7:-86156836 None:intergenic
CACTTTCAAAGCTTCTAGTA+TGG 0.308227 7:-86159690 None:intergenic
TCAATTTCTGTCTGCTGAGT+TGG 0.308960 7:-86156643 None:intergenic
CCTTGTATAGAGGAATCTTT+AGG 0.321207 7:-86156882 None:intergenic
GGATCCTCAATTGAAACAAT+TGG 0.323273 7:-86158745 None:intergenic
GACTTCCACACCCATCTTCA+TGG 0.331030 7:-86157494 None:intergenic
TTAGTTTGAGCAATGAGATT+TGG 0.336977 7:+86159733 MsG0780041076.01.T01:three_prime_UTR
TACGATAAACAAATTAGATT+TGG 0.337185 7:+86160362 MsG0780041076.01.T01:three_prime_UTR
ACTTTACTCCACCGGTTGCT+TGG 0.345294 7:+86160062 MsG0780041076.01.T01:three_prime_UTR
TAATGTTCTTAGGTTGTCAT+TGG 0.357703 7:+86158043 MsG0780041076.01.T01:intron
CTTTACTCCACCGGTTGCTT+GGG 0.361693 7:+86160063 MsG0780041076.01.T01:three_prime_UTR
TCAGGAAAACAAGGAAGGTT+TGG 0.362760 7:+86157890 MsG0780041076.01.T01:CDS
GTCAGCCCCATAAAATAAAA+AGG 0.371324 7:-86159847 None:intergenic
CAATTTCTGTCTGCTGAGTT+GGG 0.375682 7:-86156642 None:intergenic
CAAAACCAAGTTCTTGTTAC+CGG 0.376652 7:-86157282 None:intergenic
AAAGATCTGACGGGCCTTGA+TGG 0.379603 7:-86155145 None:intergenic
AGCTTCTAGTATGGCTCGAC+AGG 0.381624 7:-86159681 None:intergenic
TTAAGACCGGAGCACCTTGC+AGG 0.385327 7:+86159472 MsG0780041076.01.T01:CDS
TGTTGGAGCCTCCTCTTTCA+AGG 0.388440 7:+86157468 MsG0780041076.01.T01:CDS
GACAGAAATTGACAACTTCA+TGG 0.389489 7:+86156654 MsG0780041076.01.T01:CDS
TCAAACTAAGGTTGGTTATC+CGG 0.395194 7:-86159719 None:intergenic
GACGGCTCACAGAAGATATC+TGG 0.395388 7:+86158679 MsG0780041076.01.T01:CDS
ACCTGAGGCTCGGTGGTAGA+TGG 0.398239 7:-86160142 None:intergenic
ATCATACGATTTGAACTTCA+AGG 0.407971 7:+86158105 MsG0780041076.01.T01:CDS
AGCCGTCAGGATGTCCAAAA+AGG 0.410162 7:+86159146 MsG0780041076.01.T01:CDS
CAGCATATTGCAAACATTGC+CGG 0.421071 7:+86157263 MsG0780041076.01.T01:intron
TTCATTGCTGATCTTGCTGT+TGG 0.424087 7:+86159336 MsG0780041076.01.T01:CDS
TGACGGAACTGTTAATGAAT+GGG 0.427486 7:+86156687 MsG0780041076.01.T01:CDS
GCAACCGGTGGAGTAAAGTT+TGG 0.427490 7:-86160058 None:intergenic
CTCTGACCTGCAAGGTGCTC+CGG 0.431664 7:-86159478 None:intergenic
CATTGCCGGTAACAAGAACT+TGG 0.438486 7:+86157277 MsG0780041076.01.T01:CDS
GGTGCTGAAGCAGTGTATGC+TGG 0.440630 7:+86159642 MsG0780041076.01.T01:CDS
GTACCCAATTGTTTCAATTG+AGG 0.440774 7:+86158741 MsG0780041076.01.T01:CDS
AAATCTCATTGCTCAAACTA+AGG 0.442849 7:-86159731 None:intergenic
CTCATTGCTCAAACTAAGGT+TGG 0.443078 7:-86159727 None:intergenic
AACACTAACCTGGTTGTACT+TGG 0.444307 7:-86159508 None:intergenic
ATCACATTGAAAGCGGGAAC+AGG 0.450874 7:-86157305 None:intergenic
TCTCTTGCAGTGTGCAAAGC+TGG 0.451916 7:+86156850 MsG0780041076.01.T01:CDS
ACCATCTACCACCGAGCCTC+AGG 0.453494 7:+86160141 MsG0780041076.01.T01:three_prime_UTR
GATCCTCAATTGAAACAATT+GGG 0.460561 7:-86158744 None:intergenic
ACTCCACCGGTTGCTTGGGT+TGG 0.461300 7:+86160067 MsG0780041076.01.T01:three_prime_UTR
GAGTTTATGGTTCTTCCTGT+TGG 0.470295 7:+86157451 MsG0780041076.01.T01:CDS
TTGAAAGAGGAGGCTCCAAC+AGG 0.471503 7:-86157466 None:intergenic
CTTCATGGCTTCCTTGAAAG+AGG 0.475418 7:-86157479 None:intergenic
TCACATCGATTTCTTCTCCA+TGG 0.477736 7:+86155110 MsG0780041076.01.T01:exon
TCCCAGTCATCCTGGTCAAA+AGG 0.478242 7:-86158766 None:intergenic
GATGGAGGATCTGACTATCT+TGG 0.478515 7:+86155806 MsG0780041076.01.T01:CDS
GGGGCTGACAAGTTATCCTC+TGG 0.479163 7:+86159861 MsG0780041076.01.T01:three_prime_UTR
AGGAAACAAACTTGCAATGC+AGG 0.487451 7:+86157346 MsG0780041076.01.T01:CDS
TTGACGGAACTGTTAATGAA+TGG 0.488553 7:+86156686 MsG0780041076.01.T01:CDS
GTTCCTAGTGGTGCATCCAC+TGG 0.489788 7:+86155357 MsG0780041076.01.T01:CDS
TTCATGGTTCAGAAGCTTGA+CGG 0.490896 7:+86156670 MsG0780041076.01.T01:CDS
CATAGTGCTCCCAGTCATCC+TGG 0.492578 7:-86158774 None:intergenic
ACCGTATAAAATATGTGGTT+GGG 0.493409 7:+86160310 MsG0780041076.01.T01:three_prime_UTR
CACCGTATAAAATATGTGGT+TGG 0.494907 7:+86160309 MsG0780041076.01.T01:three_prime_UTR
GCTGTGATTAAGAAGAAATA+TGG 0.499581 7:+86157819 MsG0780041076.01.T01:CDS
AACAGCAAGATCAGCAATGA+AGG 0.504723 7:-86159334 None:intergenic
ATATAGCCAACCCAAGCAAC+CGG 0.504740 7:-86160073 None:intergenic
CTGAGAGTATTGAAGCCGTC+AGG 0.511646 7:+86159133 MsG0780041076.01.T01:CDS
AAGTTCAAACCTTCTGTGGC+TGG 0.511692 7:-86159187 None:intergenic
CATACCTTGCCGATCAATGC+TGG 0.514212 7:-86156441 None:intergenic
TTGAGAATTGAGGAGGAGCT+TGG 0.514397 7:+86159621 MsG0780041076.01.T01:CDS
GCAGTAAATGTTGGTGATGA+AGG 0.515363 7:+86157849 MsG0780041076.01.T01:CDS
TTCTTAGGTTGTCATTGGAA+TGG 0.517609 7:+86158048 MsG0780041076.01.T01:intron
GATCAATGCTGGTGCAATGA+TGG 0.520209 7:-86156430 None:intergenic
TTTCAAGGAAGCCATGAAGA+TGG 0.524759 7:+86157483 MsG0780041076.01.T01:CDS
TTGGCAGCTATTGAGAATTG+AGG 0.528228 7:+86159611 MsG0780041076.01.T01:intron
GGATAAATTACCTTGTATAG+AGG 0.532813 7:-86156892 None:intergenic
CCTAAAGATTCCTCTATACA+AGG 0.534980 7:+86156882 MsG0780041076.01.T01:CDS
AGCGAAAGTACCATCGGATA+CGG 0.536390 7:-86155325 None:intergenic
AAGTCCGCCATTGACAAAGC+TGG 0.537931 7:+86157921 MsG0780041076.01.T01:CDS
TGCAGCTTCTGAGTTCTACA+AGG 0.538609 7:+86158075 MsG0780041076.01.T01:CDS
ATTGGAACGACATTGAAAGT+AGG 0.539332 7:-86159932 None:intergenic
CAACTTAAGCAATCGTGAAG+AGG 0.545215 7:-86160209 None:intergenic
GGTGTAACCAGCTTTGTCAA+TGG 0.547964 7:-86157928 None:intergenic
GCAACCAAACTTTACTCCAC+CGG 0.548449 7:+86160054 MsG0780041076.01.T01:three_prime_UTR
TTCAAGGAAGCCATGAAGAT+GGG 0.550371 7:+86157484 MsG0780041076.01.T01:CDS
ATCATTGCACCAGCATTGAT+CGG 0.553718 7:+86156432 MsG0780041076.01.T01:CDS
CCCCAACATTCAGGAAAACA+AGG 0.562910 7:+86157881 MsG0780041076.01.T01:CDS
GAGGCTCTTGAGTTAAGAGA+TGG 0.564582 7:+86155788 MsG0780041076.01.T01:CDS
GGCTGCTATTACCTCCATCA+AGG 0.566953 7:+86155131 MsG0780041076.01.T01:CDS
GCTTTCAATGTGATTAATGG+TGG 0.568679 7:+86157314 MsG0780041076.01.T01:CDS
CATACTAGAAGCTTTGAAAG+TGG 0.569484 7:+86159691 MsG0780041076.01.T01:exon
GGAAGCCATGAAGATGGGTG+TGG 0.573653 7:+86157489 MsG0780041076.01.T01:CDS
TCTTGGCAAGGGTGTATCAA+AGG 0.577692 7:+86155823 MsG0780041076.01.T01:CDS
CAGACACCGTATAAAATATG+TGG 0.578912 7:+86160305 MsG0780041076.01.T01:three_prime_UTR
AGTATGGCTCGACAGGGGTA+CGG 0.579765 7:-86159674 None:intergenic
GTGTCCACAGAGAGTTCAGA+AGG 0.580306 7:+86158949 MsG0780041076.01.T01:CDS
TCTTGCTGTTGGTTTGTCAA+CGG 0.581023 7:+86159347 MsG0780041076.01.T01:CDS
AGACACTGCTAATATGGCAT+TGG 0.587574 7:-86156830 None:intergenic
GATGGAGGTAATAGCAGCCA+TGG 0.587616 7:-86155127 None:intergenic
AACATTCAGGAAAACAAGGA+AGG 0.590478 7:+86157885 MsG0780041076.01.T01:CDS
CTGAAAAGAGAACTGTATTG+TGG 0.590789 7:+86160266 MsG0780041076.01.T01:three_prime_UTR
CATGGCTTCCTTGAAAGAGG+AGG 0.591923 7:-86157476 None:intergenic
CCATTAATCACATTGAAAGC+GGG 0.594481 7:-86157311 None:intergenic
ATTAATGGTGGATCACATGC+AGG 0.595757 7:+86157326 MsG0780041076.01.T01:CDS
GAACAGGGTCAAATTAAGAC+CGG 0.596686 7:+86159459 MsG0780041076.01.T01:intron
CGTCAGATCTTTGACAGTCG+TGG 0.597878 7:+86155156 MsG0780041076.01.T01:CDS
AGGATCTGACTATCTTGGCA+AGG 0.598318 7:+86155811 MsG0780041076.01.T01:CDS
TGAAGACGAACCTCGACGGT+AGG 0.599041 7:-86155183 None:intergenic
AAGCAATAAAACCTGAGGCT+CGG 0.599744 7:-86160152 None:intergenic
GTGTCATGACCAGCCACAGA+AGG 0.602021 7:+86159178 MsG0780041076.01.T01:CDS
CACGACTGTCAAAGATCTGA+CGG 0.602120 7:-86155155 None:intergenic
GCAAGACGCTCTGACCTGCA+AGG 0.602568 7:-86159486 None:intergenic
GGATCTGACTATCTTGGCAA+GGG 0.603603 7:+86155812 MsG0780041076.01.T01:CDS
ACGACTGTCAAAGATCTGAC+GGG 0.605306 7:-86155154 None:intergenic
ATGGGGTTGGTGCAAACAAA+AGG 0.606880 7:+86156705 MsG0780041076.01.T01:CDS
ACCATTAATCACATTGAAAG+CGG 0.610449 7:-86157312 None:intergenic
GCTTCTAGTATGGCTCGACA+GGG 0.610899 7:-86159680 None:intergenic
GACAAAGTTCAAACCTTCTG+TGG 0.611804 7:-86159191 None:intergenic
AGCTCTAGCGAAAGTACCAT+CGG 0.612079 7:-86155331 None:intergenic
GCTAGAGCTGCTGTTCCTAG+TGG 0.613085 7:+86155345 MsG0780041076.01.T01:CDS
GAGCACTATGCTAAGATGAC+CGG 0.616214 7:+86158787 MsG0780041076.01.T01:CDS
GATCTGACGGGCCTTGATGG+AGG 0.617525 7:-86155142 None:intergenic
TTTGTTGTATACGTAGCCAG+TGG 0.625526 7:-86160030 None:intergenic
ATTGACAAAGCTGGTTACAC+CGG 0.627043 7:+86157930 MsG0780041076.01.T01:CDS
ATACCAGTGGATGCACCACT+AGG 0.628478 7:-86155360 None:intergenic
GATGCAAACCGACCTTCAGA+TGG 0.629057 7:-86157522 None:intergenic
CAATAAAACCTGAGGCTCGG+TGG 0.630433 7:-86160149 None:intergenic
GCTCTTGAGTTAAGAGATGG+AGG 0.631055 7:+86155791 MsG0780041076.01.T01:CDS
TGTTTGCAGTGGAGAGACTG+AGG 0.633750 7:+86159308 MsG0780041076.01.T01:intron
CTAATTATTAGGTATTTACG+AGG 0.636389 7:+86155769 MsG0780041076.01.T01:intron
TTGTTGTATACGTAGCCAGT+GGG 0.637900 7:-86160029 None:intergenic
ATTGCCTTCTGAACTCTCTG+TGG 0.638013 7:-86158953 None:intergenic
GGCTTCAATACTCTCAGTCA+CGG 0.640921 7:-86159127 None:intergenic
TGCACCAGCATTGATCGGCA+AGG 0.641409 7:+86156437 MsG0780041076.01.T01:CDS
GCAGCTATTGAGAATTGAGG+AGG 0.642636 7:+86159614 MsG0780041076.01.T01:intron
GAAGTGAAGACGAACCTCGA+CGG 0.646889 7:-86155187 None:intergenic
TCAAAAGTATCACTACCCAC+TGG 0.647418 7:+86160014 MsG0780041076.01.T01:three_prime_UTR
GGTCAAGATGCAGTAAATGT+TGG 0.647677 7:+86157840 MsG0780041076.01.T01:CDS
GCGTCTTGCCAAGTACAACC+AGG 0.651331 7:+86159500 MsG0780041076.01.T01:CDS
TAGCCAACCCAAGCAACCGG+TGG 0.655770 7:-86160070 None:intergenic
TGAGCAATGAGATTTGGCTG+CGG 0.657198 7:+86159739 MsG0780041076.01.T01:three_prime_UTR
GGAAGTCTATCACCATCTGA+AGG 0.660829 7:+86157510 MsG0780041076.01.T01:CDS
TGCAATGATGGTGTTCACGT+TGG 0.669626 7:-86156418 None:intergenic
GTAACCAGCTTTGTCAATGG+CGG 0.670465 7:-86157925 None:intergenic
GAACTGTTAATGAATGGGGT+TGG 0.674740 7:+86156692 MsG0780041076.01.T01:CDS
TTGTAAAGACAGATGCGTTG+TGG 0.674792 7:+86160229 MsG0780041076.01.T01:three_prime_UTR
GTTGATATAACCGTATCCGA+TGG 0.679936 7:+86155315 MsG0780041076.01.T01:CDS
AGTTCAAGCAATAAAACCTG+AGG 0.680048 7:-86160157 None:intergenic
CTCACAGAAGATATCTGGAG+AGG 0.680128 7:+86158684 MsG0780041076.01.T01:CDS
GACGGAACTGTTAATGAATG+GGG 0.691515 7:+86156688 MsG0780041076.01.T01:CDS
GTAAATGTTGGTGATGAAGG+TGG 0.697402 7:+86157852 MsG0780041076.01.T01:CDS
TCGTGGCAATCCTACCGTCG+AGG 0.699567 7:+86155173 MsG0780041076.01.T01:CDS
AGCTTCTGAGTTCTACAAGG+AGG 0.702282 7:+86158078 MsG0780041076.01.T01:CDS
TTGACAATCCAGAACAACGA+CGG 0.703661 7:+86158661 MsG0780041076.01.T01:intron
CTTCTAGTATGGCTCGACAG+GGG 0.721455 7:-86159679 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTGTATATATAAATAAAA+TGG - Chr7:86158457-86158476 None:intergenic 10.0%
!! GTTTCAAAAATAAAATTAAA+CGG - Chr7:86155750-86155769 None:intergenic 10.0%
!!! GAATTTTTTTTTATTCTTTT+GGG + Chr7:86158883-86158902 MsG0780041076.01.T01:intron 10.0%
!!! TATTTTTGAAACTAATTATT+AGG + Chr7:86155758-86155777 MsG0780041076.01.T01:intron 10.0%
!!! TGAATTTTTTTTTATTCTTT+TGG + Chr7:86158882-86158901 MsG0780041076.01.T01:intron 10.0%
!! AATCTGATTATGATTATTAT+AGG + Chr7:86155293-86155312 MsG0780041076.01.T01:intron 15.0%
!! ATAAAAAGGTCAAAATTTAT+TGG - Chr7:86159836-86159855 None:intergenic 15.0%
!! ATTATAATAACTCATTGTAA+AGG - Chr7:86157111-86157130 None:intergenic 15.0%
!! GGTATAAATTATAAAATATC+CGG + Chr7:86158372-86158391 MsG0780041076.01.T01:intron 15.0%
!! TTGAAAATCATCATAAATAA+CGG - Chr7:86155491-86155510 None:intergenic 15.0%
!!! ATCTAATATTTTTTGGTATT+CGG + Chr7:86157026-86157045 MsG0780041076.01.T01:intron 15.0%
!!! ATTTTGACCTTTTTATTTTA+TGG + Chr7:86159840-86159859 MsG0780041076.01.T01:three_prime_UTR 15.0%
!!! TAAAAAAGTATAGTACTAAA+TGG - Chr7:86160447-86160466 None:intergenic 15.0%
!!! TAATAACTTGATATATCTTT+TGG - Chr7:86155986-86156005 None:intergenic 15.0%
!!! TGTATTCATCTAATATTTTT+TGG + Chr7:86157019-86157038 MsG0780041076.01.T01:intron 15.0%
!!! TTTTGACCTTTTTATTTTAT+GGG + Chr7:86159841-86159860 MsG0780041076.01.T01:three_prime_UTR 15.0%
!!! TTTTTGTGTGTTAATTATTA+TGG + Chr7:86155439-86155458 MsG0780041076.01.T01:intron 15.0%
!! AAAAGGAAACGTTATTATAT+TGG - Chr7:86159424-86159443 None:intergenic 20.0%
!! AAAATTAATTCCATTACTAG+AGG + Chr7:86156578-86156597 MsG0780041076.01.T01:intron 20.0%
!! AAATAGAACGAAATGAAAAT+AGG - Chr7:86156057-86156076 None:intergenic 20.0%
!! ATGATAAAAAAAACTGTCAT+CGG - Chr7:86156513-86156532 None:intergenic 20.0%
!! GAAATCTACTTAAATATCTA+TGG - Chr7:86155669-86155688 None:intergenic 20.0%
!! TAATTAGACGTCATAAAATT+TGG + Chr7:86160099-86160118 MsG0780041076.01.T01:three_prime_UTR 20.0%
!! TACAAATTAATATACGACAT+TGG + Chr7:86158539-86158558 MsG0780041076.01.T01:intron 20.0%
!! TACGATAAACAAATTAGATT+TGG + Chr7:86160362-86160381 MsG0780041076.01.T01:three_prime_UTR 20.0%
!! TATAAATAAAATGGCTAACA+AGG - Chr7:86158448-86158467 None:intergenic 20.0%
!! TATATATACAACTTGAAAGA+TGG + Chr7:86158464-86158483 MsG0780041076.01.T01:intron 20.0%
!! TCACTTAACTATACTATAAT+GGG - Chr7:86156539-86156558 None:intergenic 20.0%
!! TTAAGAAACAGAAAATATGA+TGG - Chr7:86155860-86155879 None:intergenic 20.0%
!! TTCACTTAACTATACTATAA+TGG - Chr7:86156540-86156559 None:intergenic 20.0%
!!! AAAATTTAGATAATGCCTTT+TGG - Chr7:86157567-86157586 None:intergenic 20.0%
!!! ACATTTTGTATAATGTTCTT+AGG + Chr7:86158033-86158052 MsG0780041076.01.T01:intron 20.0%
!!! AGATTTGTTTCATATTATTG+AGG - Chr7:86157596-86157615 None:intergenic 20.0%
!!! GTCTTTTATTTTGTCTTTTT+TGG + Chr7:86156077-86156096 MsG0780041076.01.T01:intron 20.0%
!!! TACACTCTTCAAAATTTTTT+TGG + Chr7:86160485-86160504 MsG0780041076.01.T01:three_prime_UTR 20.0%
!!! TCAACATAAATGTTTTTTTG+AGG - Chr7:86158606-86158625 None:intergenic 20.0%
!!! TTTATTTTGTCTTTTTTGGA+AGG + Chr7:86156081-86156100 MsG0780041076.01.T01:intron 20.0%
!!! TTTGACCTTTTTATTTTATG+GGG + Chr7:86159842-86159861 MsG0780041076.01.T01:three_prime_UTR 20.0%
!!! TTTTCATCAATTCTATTTTG+TGG + Chr7:86155398-86155417 MsG0780041076.01.T01:intron 20.0%
! AAAAAACAATCAGAACTAGA+AGG - Chr7:86156789-86156808 None:intergenic 25.0%
! AAACGACTCAACTAAAAATA+TGG - Chr7:86157199-86157218 None:intergenic 25.0%
! AAACGTTATTATATTGGACA+TGG - Chr7:86159418-86159437 None:intergenic 25.0%
! AACGTTATTATATTGGACAT+GGG - Chr7:86159417-86159436 None:intergenic 25.0%
! ACCAAAAAAGAAATGAAACA+AGG - Chr7:86156242-86156261 None:intergenic 25.0%
! ATAAAATTTGGTCATGCATT+AGG + Chr7:86160111-86160130 MsG0780041076.01.T01:three_prime_UTR 25.0%
! ATATGGACATAAAAGAAAAC+TGG - Chr7:86157182-86157201 None:intergenic 25.0%
! ATCAATACATTTATCTACCT+AGG - Chr7:86159060-86159079 None:intergenic 25.0%
! ATTCTTAACCCTTCTTAAAA+AGG - Chr7:86158399-86158418 None:intergenic 25.0%
! CAACTGTAAGATATTTAACA+AGG + Chr7:86159249-86159268 MsG0780041076.01.T01:intron 25.0%
! CACTTAACTATACTATAATG+GGG - Chr7:86156538-86156557 None:intergenic 25.0%
! CTAATTATTAGGTATTTACG+AGG + Chr7:86155769-86155788 MsG0780041076.01.T01:intron 25.0%
! TATGATTAGAAAACTACCAA+TGG + Chr7:86156154-86156173 MsG0780041076.01.T01:intron 25.0%
! TATGGACATAAAAGAAAACT+GGG - Chr7:86157181-86157200 None:intergenic 25.0%
! TCAAGATACGATTAACAAAA+AGG - Chr7:86159441-86159460 None:intergenic 25.0%
! TCATATAATATACAGACCTT+GGG - Chr7:86158865-86158884 None:intergenic 25.0%
! TCTCAGATTTATTCATTTGA+GGG + Chr7:86158004-86158023 MsG0780041076.01.T01:intron 25.0%
! TGGTACTTAACTGTATTTAA+AGG + Chr7:86156923-86156942 MsG0780041076.01.T01:intron 25.0%
! TTCATATAATATACAGACCT+TGG - Chr7:86158866-86158885 None:intergenic 25.0%
! TTCTCAGATTTATTCATTTG+AGG + Chr7:86158003-86158022 MsG0780041076.01.T01:intron 25.0%
! TTGAGAAAAGAAATGAATGA+AGG - Chr7:86156191-86156210 None:intergenic 25.0%
! TTTCCATTCCTTCATAAAAT+AGG - Chr7:86156125-86156144 None:intergenic 25.0%
!! AAAGTATTTCTCCTAATGAA+GGG - Chr7:86155922-86155941 None:intergenic 25.0%
!! AACAATAGAAACAGTTCTTT+TGG + Chr7:86158344-86158363 MsG0780041076.01.T01:intron 25.0%
!! AATTTTCTGTTTCGGTTATT+TGG + Chr7:86157979-86157998 MsG0780041076.01.T01:intron 25.0%
!! CTCTATTCAATTTTCTGTTT+CGG + Chr7:86157971-86157990 MsG0780041076.01.T01:intron 25.0%
!! TATTACATTAGTGTTTTCTC+TGG + Chr7:86156474-86156493 MsG0780041076.01.T01:intron 25.0%
!! TGGTAGTTTTCTAATCATAA+AGG - Chr7:86156153-86156172 None:intergenic 25.0%
!! TTTGTTGATTACATTTGCTT+CGG + Chr7:86159529-86159548 MsG0780041076.01.T01:intron 25.0%
!!! AAAAGTATTTCTCCTAATGA+AGG - Chr7:86155923-86155942 None:intergenic 25.0%
!!! AATTTTGAAGAGTGTACTTT+AGG - Chr7:86160481-86160500 None:intergenic 25.0%
!!! TCATATATTTTTGTTTGCAG+TGG + Chr7:86159297-86159316 MsG0780041076.01.T01:intron 25.0%
!!! TGTTTTTTACCAGTAATAAG+CGG + Chr7:86157641-86157660 MsG0780041076.01.T01:intron 25.0%
!!! TTCTAGTTCTGATTGTTTTT+TGG + Chr7:86156788-86156807 MsG0780041076.01.T01:intron 25.0%
!!! TTCTGATTGTTTTTTGGTTT+TGG + Chr7:86156794-86156813 MsG0780041076.01.T01:intron 25.0%
!!! TTGTGCTTTAGATTTCTTTT+TGG + Chr7:86156020-86156039 MsG0780041076.01.T01:intron 25.0%
AAAAAGAAATGAAACAAGGC+AGG - Chr7:86156238-86156257 None:intergenic 30.0%
AAATCTCATTGCTCAAACTA+AGG - Chr7:86159734-86159753 None:intergenic 30.0%
ACAATTGTAGAACTGAGATA+AGG - Chr7:86159378-86159397 None:intergenic 30.0%
ACCATTAATCACATTGAAAG+CGG - Chr7:86157315-86157334 None:intergenic 30.0%
ACCGTATAAAATATGTGGTT+GGG + Chr7:86160310-86160329 MsG0780041076.01.T01:three_prime_UTR 30.0%
ATCACCAACAATTTGTACAT+TGG - Chr7:86158824-86158843 None:intergenic 30.0%
ATCATACGATTTGAACTTCA+AGG + Chr7:86158105-86158124 MsG0780041076.01.T01:CDS 30.0%
ATGGACATAAAAGAAAACTG+GGG - Chr7:86157180-86157199 None:intergenic 30.0%
CATATAATATACAGACCTTG+GGG - Chr7:86158864-86158883 None:intergenic 30.0%
CGAAACAGAAAATTGAATAG+AGG - Chr7:86157973-86157992 None:intergenic 30.0%
GATCCTCAATTGAAACAATT+GGG - Chr7:86158747-86158766 None:intergenic 30.0%
GCTGTGATTAAGAAGAAATA+TGG + Chr7:86157819-86157838 MsG0780041076.01.T01:CDS 30.0%
GGATAAATTACCTTGTATAG+AGG - Chr7:86156895-86156914 None:intergenic 30.0%
GTTACTACTCAACTGAAAAT+TGG - Chr7:86159953-86159972 None:intergenic 30.0%
TAATAACAACTCTGGTACTA+AGG - Chr7:86158312-86158331 None:intergenic 30.0%
TACTGCATAAAAAAGTGAGA+TGG + Chr7:86156313-86156332 MsG0780041076.01.T01:intron 30.0%
TACTGGTAAAAAACAAAGCT+TGG - Chr7:86157636-86157655 None:intergenic 30.0%
TGTTAATCGTATCTTGAACA+GGG + Chr7:86159444-86159463 MsG0780041076.01.T01:intron 30.0%
TTGTTAATCGTATCTTGAAC+AGG + Chr7:86159443-86159462 MsG0780041076.01.T01:intron 30.0%
! ACACAACTTTAAAAATCCAG+AGG - Chr7:86159880-86159899 None:intergenic 30.0%
! ACCCAACCACATATTTTATA+CGG - Chr7:86160314-86160333 None:intergenic 30.0%
! AGATTTCGTAGATTTTACTC+TGG + Chr7:86155682-86155701 MsG0780041076.01.T01:intron 30.0%
! CTACCTATTTTATGAAGGAA+TGG + Chr7:86156119-86156138 MsG0780041076.01.T01:intron 30.0%
! CTCAACTACCTATTTTATGA+AGG + Chr7:86156114-86156133 MsG0780041076.01.T01:intron 30.0%
! CTTGACATATTTGAAACAAC+AGG + Chr7:86159089-86159108 MsG0780041076.01.T01:intron 30.0%
! TAATGTTCTTAGGTTGTCAT+TGG + Chr7:86158043-86158062 MsG0780041076.01.T01:intron 30.0%
! TGAGTAGTAACGATTTTTGT+TGG + Chr7:86159962-86159981 MsG0780041076.01.T01:three_prime_UTR 30.0%
! TTAGTTTGAGCAATGAGATT+TGG + Chr7:86159733-86159752 MsG0780041076.01.T01:three_prime_UTR 30.0%
! TTCAACTGAACTGTGTTATT+AGG - Chr7:86160419-86160438 None:intergenic 30.0%
!! TCAAGGTACTCTCATTTTAT+TGG + Chr7:86159005-86159024 MsG0780041076.01.T01:intron 30.0%
!!! ATTCTCACCTGATTTTTTCT+TGG + Chr7:86156379-86156398 MsG0780041076.01.T01:intron 30.0%
!!! GCCTTGTTTCATTTCTTTTT+TGG + Chr7:86156238-86156257 MsG0780041076.01.T01:intron 30.0%
!!! GTTTTTTACCAGTAATAAGC+GGG + Chr7:86157642-86157661 MsG0780041076.01.T01:intron 30.0%
!!! TCTGGATTTTTAAAGTTGTG+TGG + Chr7:86159879-86159898 MsG0780041076.01.T01:three_prime_UTR 30.0%
AAACAACAGGTCAACCAAAT+TGG + Chr7:86159102-86159121 MsG0780041076.01.T01:intron 35.0%
AAAGAGTGAGAAAGGAAAGT+CGG - Chr7:86158221-86158240 None:intergenic 35.0%
AAATATGTGGTTGGGTGTTT+AGG + Chr7:86160318-86160337 MsG0780041076.01.T01:three_prime_UTR 35.0%
AACATTCAGGAAAACAAGGA+AGG + Chr7:86157885-86157904 MsG0780041076.01.T01:CDS 35.0%
AAGAACCATCAAAGCATATG+TGG - Chr7:86157726-86157745 None:intergenic 35.0%
AAGCTCAAGCAGTTTCTAAT+TGG + Chr7:86159577-86159596 MsG0780041076.01.T01:intron 35.0%
AGCAAAAAGCAACAAATCAG+AGG - Chr7:86158927-86158946 None:intergenic 35.0%
AGGCTTTCTAATAACAACTC+TGG - Chr7:86158320-86158339 None:intergenic 35.0%
AGTTCAAGCAATAAAACCTG+AGG - Chr7:86160160-86160179 None:intergenic 35.0%
ATCACAATGACCTCTAGTAA+TGG - Chr7:86156591-86156610 None:intergenic 35.0%
ATCGATGAGCGATAATAGAT+CGG - Chr7:86155240-86155259 None:intergenic 35.0%
ATTCGTTTACCTCTTCCAAA+AGG + Chr7:86157549-86157568 MsG0780041076.01.T01:intron 35.0%
ATTGGAACGACATTGAAAGT+AGG - Chr7:86159935-86159954 None:intergenic 35.0%
ATTTAAAGGCCTCTGTTAGT+TGG + Chr7:86156937-86156956 MsG0780041076.01.T01:intron 35.0%
CAAAACCAAGTTCTTGTTAC+CGG - Chr7:86157285-86157304 None:intergenic 35.0%
CACCGTATAAAATATGTGGT+TGG + Chr7:86160309-86160328 MsG0780041076.01.T01:three_prime_UTR 35.0%
CACTTTCAAAGCTTCTAGTA+TGG - Chr7:86159693-86159712 None:intergenic 35.0%
CAGACACCGTATAAAATATG+TGG + Chr7:86160305-86160324 MsG0780041076.01.T01:three_prime_UTR 35.0%
CCATTAATCACATTGAAAGC+GGG - Chr7:86157314-86157333 None:intergenic 35.0%
CCTAAAGATTCCTCTATACA+AGG + Chr7:86156882-86156901 MsG0780041076.01.T01:CDS 35.0%
CCTTGTATAGAGGAATCTTT+AGG - Chr7:86156885-86156904 None:intergenic 35.0%
CTGAAAAGAGAACTGTATTG+TGG + Chr7:86160266-86160285 MsG0780041076.01.T01:three_prime_UTR 35.0%
GACAGAAATTGACAACTTCA+TGG + Chr7:86156654-86156673 MsG0780041076.01.T01:CDS 35.0%
GCTTTCAATGTGATTAATGG+TGG + Chr7:86157314-86157333 MsG0780041076.01.T01:CDS 35.0%
GGAACCAATGTACAAATTGT+TGG + Chr7:86158817-86158836 MsG0780041076.01.T01:intron 35.0%
GGAGAAAAAACTTACTTTGC+CGG - Chr7:86157952-86157971 None:intergenic 35.0%
GGATCCTCAATTGAAACAAT+TGG - Chr7:86158748-86158767 None:intergenic 35.0%
GGTAATTTATCCATGAACTG+TGG + Chr7:86156903-86156922 MsG0780041076.01.T01:intron 35.0%
GTAATCAACAAACACTAACC+TGG - Chr7:86159521-86159540 None:intergenic 35.0%
GTACCCAATTGTTTCAATTG+AGG + Chr7:86158741-86158760 MsG0780041076.01.T01:CDS 35.0%
GTCAGCCCCATAAAATAAAA+AGG - Chr7:86159850-86159869 None:intergenic 35.0%
GTTCCTTCTGATATCATTTC+AGG + Chr7:86157797-86157816 MsG0780041076.01.T01:intron 35.0%
TAACCCTTCTTAAAAAGGAC+CGG - Chr7:86158394-86158413 None:intergenic 35.0%
TCAACTTCAATTACACGACA+TGG - Chr7:86156965-86156984 None:intergenic 35.0%
TCAAGCAGTTTCTAATTGGT+TGG + Chr7:86159581-86159600 MsG0780041076.01.T01:intron 35.0%
TCTATCCACATATGCTTTGA+TGG + Chr7:86157718-86157737 MsG0780041076.01.T01:intron 35.0%
TGACGGAACTGTTAATGAAT+GGG + Chr7:86156687-86156706 MsG0780041076.01.T01:CDS 35.0%
TGTGATAGATTACGATCTAC+AGG - Chr7:86156747-86156766 None:intergenic 35.0%
TTCCAGTTATACCCTTCATT+AGG + Chr7:86155908-86155927 MsG0780041076.01.T01:intron 35.0%
TTCGGTACTTAAGAACAACA+TGG + Chr7:86157044-86157063 MsG0780041076.01.T01:intron 35.0%
TTGACGGAACTGTTAATGAA+TGG + Chr7:86156686-86156705 MsG0780041076.01.T01:CDS 35.0%
! ACTTTCCTTTCTCACTCTTT+TGG + Chr7:86158221-86158240 MsG0780041076.01.T01:intron 35.0%
! AGAAACAGTTCTTTTGGCAA+AGG + Chr7:86158350-86158369 MsG0780041076.01.T01:intron 35.0%
! AGAGTTGTTATTAGAAAGCC+TGG + Chr7:86158319-86158338 MsG0780041076.01.T01:intron 35.0%
! GAAACAGTTCTTTTGGCAAA+GGG + Chr7:86158351-86158370 MsG0780041076.01.T01:intron 35.0%
! GAGTTGTTATTAGAAAGCCT+GGG + Chr7:86158320-86158339 MsG0780041076.01.T01:intron 35.0%
! TCAAACTAAGGTTGGTTATC+CGG - Chr7:86159722-86159741 None:intergenic 35.0%
! TTCTTAGGTTGTCATTGGAA+TGG + Chr7:86158048-86158067 MsG0780041076.01.T01:intron 35.0%
!! AACTGTTTCTATTGTTACCC+AGG - Chr7:86158340-86158359 None:intergenic 35.0%
!! AATTGTTGGTGATGATCTCT+TGG + Chr7:86158831-86158850 MsG0780041076.01.T01:intron 35.0%
!! AGATTTTACTCTGGTACTGA+TGG + Chr7:86155691-86155710 MsG0780041076.01.T01:intron 35.0%
!! AGCTTTGAAAGTGGAAAAAC+CGG + Chr7:86159700-86159719 MsG0780041076.01.T01:three_prime_UTR 35.0%
!! ATATCCGGTCCTTTTTAAGA+AGG + Chr7:86158387-86158406 MsG0780041076.01.T01:intron 35.0%
!! CATACTAGAAGCTTTGAAAG+TGG + Chr7:86159691-86159710 MsG0780041076.01.T01:exon 35.0%
!! TAGATAATGCCTTTTGGAAG+AGG - Chr7:86157561-86157580 None:intergenic 35.0%
!! TATCCGGTCCTTTTTAAGAA+GGG + Chr7:86158388-86158407 MsG0780041076.01.T01:intron 35.0%
!!! TCCTTGTTTTCCTGAATGTT+GGG - Chr7:86157885-86157904 None:intergenic 35.0%
!!! TTCCTTGTTTTCCTGAATGT+TGG - Chr7:86157886-86157905 None:intergenic 35.0%
!!! TTTTGGTTTTGGTTTCAGCT+TGG + Chr7:86156805-86156824 MsG0780041076.01.T01:intron 35.0%
AACACTAACCTGGTTGTACT+TGG - Chr7:86159511-86159530 None:intergenic 40.0%
AACAGCAAGATCAGCAATGA+AGG - Chr7:86159337-86159356 None:intergenic 40.0%
AAGCAATAAAACCTGAGGCT+CGG - Chr7:86160155-86160174 None:intergenic 40.0%
AAGCACCAAAAGAGTGAGAA+AGG - Chr7:86158229-86158248 None:intergenic 40.0%
ACTTCTTTATGTCCATTCCG+TGG + Chr7:86157237-86157256 MsG0780041076.01.T01:intron 40.0%
AGACACTGCTAATATGGCAT+TGG - Chr7:86156833-86156852 None:intergenic 40.0%
AGGAAACAAACTTGCAATGC+AGG + Chr7:86157346-86157365 MsG0780041076.01.T01:CDS 40.0%
ATTGACAAAGCTGGTTACAC+CGG + Chr7:86157930-86157949 MsG0780041076.01.T01:CDS 40.0%
CAACTTAAGCAATCGTGAAG+AGG - Chr7:86160212-86160231 None:intergenic 40.0%
CAATTTCTGTCTGCTGAGTT+GGG - Chr7:86156645-86156664 None:intergenic 40.0%
CAGCATATTGCAAACATTGC+CGG + Chr7:86157263-86157282 MsG0780041076.01.T01:intron 40.0%
CAGCCTGAAATGATATCAGA+AGG - Chr7:86157803-86157822 None:intergenic 40.0%
CAGTTAAGTACCACAGTTCA+TGG - Chr7:86156916-86156935 None:intergenic 40.0%
CATGCATATGCAGGAGTTTA+TGG + Chr7:86157438-86157457 MsG0780041076.01.T01:intron 40.0%
CCCGCTTTCAATGTGATTAA+TGG + Chr7:86157311-86157330 MsG0780041076.01.T01:CDS 40.0%
CTAAGGTGTATAATCAGCAC+AGG - Chr7:86158295-86158314 None:intergenic 40.0%
CTCATTGCTCAAACTAAGGT+TGG - Chr7:86159730-86159749 None:intergenic 40.0%
CTTCTTTATGTCCATTCCGT+GGG + Chr7:86157238-86157257 MsG0780041076.01.T01:intron 40.0%
GAAATGAATGAAGGCTCAGA+AGG - Chr7:86156182-86156201 None:intergenic 40.0%
GAACAGGGTCAAATTAAGAC+CGG + Chr7:86159459-86159478 MsG0780041076.01.T01:intron 40.0%
GAACTGTTAATGAATGGGGT+TGG + Chr7:86156692-86156711 MsG0780041076.01.T01:CDS 40.0%
GACAAAGTTCAAACCTTCTG+TGG - Chr7:86159194-86159213 None:intergenic 40.0%
GACGGAACTGTTAATGAATG+GGG + Chr7:86156688-86156707 MsG0780041076.01.T01:CDS 40.0%
GAGTTTATGGTTCTTCCTGT+TGG + Chr7:86157451-86157470 MsG0780041076.01.T01:CDS 40.0%
GGTCAAGATGCAGTAAATGT+TGG + Chr7:86157840-86157859 MsG0780041076.01.T01:CDS 40.0%
GTTGATATAACCGTATCCGA+TGG + Chr7:86155315-86155334 MsG0780041076.01.T01:CDS 40.0%
TAATATACAGACCTTGGGGT+TGG - Chr7:86158860-86158879 None:intergenic 40.0%
TACATTTGCTTCGGTTGCTT+CGG + Chr7:86159538-86159557 MsG0780041076.01.T01:intron 40.0%
TCAATTTCTGTCTGCTGAGT+TGG - Chr7:86156646-86156665 None:intergenic 40.0%
TCAGGAAAACAAGGAAGGTT+TGG + Chr7:86157890-86157909 MsG0780041076.01.T01:CDS 40.0%
TGCAAGAGACACTGCTAATA+TGG - Chr7:86156839-86156858 None:intergenic 40.0%
TTCAAGGAAGCCATGAAGAT+GGG + Chr7:86157484-86157503 MsG0780041076.01.T01:CDS 40.0%
TTCATGGTTCAGAAGCTTGA+CGG + Chr7:86156670-86156689 MsG0780041076.01.T01:CDS 40.0%
TTCTGATGTCATGCATATGC+AGG + Chr7:86157429-86157448 MsG0780041076.01.T01:intron 40.0%
TTGACAATCCAGAACAACGA+CGG + Chr7:86158661-86158680 MsG0780041076.01.T01:intron 40.0%
TTGGCAGCTATTGAGAATTG+AGG + Chr7:86159611-86159630 MsG0780041076.01.T01:intron 40.0%
TTGTAAAGACAGATGCGTTG+TGG + Chr7:86160229-86160248 MsG0780041076.01.T01:three_prime_UTR 40.0%
TTGTTGTATACGTAGCCAGT+GGG - Chr7:86160032-86160051 None:intergenic 40.0%
TTTCAAGGAAGCCATGAAGA+TGG + Chr7:86157483-86157502 MsG0780041076.01.T01:CDS 40.0%
! AAGGATTTGAGACTTCTGAG+CGG - Chr7:86158182-86158201 None:intergenic 40.0%
! AATTGAGGATCCTTTTGACC+AGG + Chr7:86158756-86158775 MsG0780041076.01.T01:CDS 40.0%
! ATGCAATGCTCTTTTGCTCA+AGG + Chr7:86158988-86159007 MsG0780041076.01.T01:CDS 40.0%
! CTCCTAATGAAGGGTATAAC+TGG - Chr7:86155913-86155932 None:intergenic 40.0%
! TAATAAGCGGGTGCTTTTAC+TGG + Chr7:86157654-86157673 MsG0780041076.01.T01:intron 40.0%
! TTCATTGCTGATCTTGCTGT+TGG + Chr7:86159336-86159355 MsG0780041076.01.T01:CDS 40.0%
! TTTGTTGTATACGTAGCCAG+TGG - Chr7:86160033-86160052 None:intergenic 40.0%
!! ATCATTGCACCAGCATTGAT+CGG + Chr7:86156432-86156451 MsG0780041076.01.T01:CDS 40.0%
!! ATTAATGGTGGATCACATGC+AGG + Chr7:86157326-86157345 MsG0780041076.01.T01:CDS 40.0%
!! CTTGTTTTCCTGAATGTTGG+GGG - Chr7:86157883-86157902 None:intergenic 40.0%
!! GCAGTAAATGTTGGTGATGA+AGG + Chr7:86157849-86157868 MsG0780041076.01.T01:CDS 40.0%
!! GTAAATGTTGGTGATGAAGG+TGG + Chr7:86157852-86157871 MsG0780041076.01.T01:CDS 40.0%
!! TAAAAGCACCCGCTTATTAC+TGG - Chr7:86157653-86157672 None:intergenic 40.0%
!! TACATTGGTTCCAATCTCAC+CGG - Chr7:86158809-86158828 None:intergenic 40.0%
!! TCAAAAGTATCACTACCCAC+TGG + Chr7:86160014-86160033 MsG0780041076.01.T01:three_prime_UTR 40.0%
!! TCACATCGATTTCTTCTCCA+TGG + Chr7:86155110-86155129 MsG0780041076.01.T01:exon 40.0%
!! TCTTGCTGTTGGTTTGTCAA+CGG + Chr7:86159347-86159366 MsG0780041076.01.T01:CDS 40.0%
!!! CCTTGTTTTCCTGAATGTTG+GGG - Chr7:86157884-86157903 None:intergenic 40.0%
AAGTTCAAACCTTCTGTGGC+TGG - Chr7:86159190-86159209 None:intergenic 45.0%
ACGACTGTCAAAGATCTGAC+GGG - Chr7:86155157-86155176 None:intergenic 45.0%
AGCATATGTGGATAGACACC+AGG - Chr7:86157714-86157733 None:intergenic 45.0%
AGCTTCTGAGTTCTACAAGG+AGG + Chr7:86158078-86158097 MsG0780041076.01.T01:CDS 45.0%
AGGAAAGTCGGTTGAAGAGA+AGG - Chr7:86158209-86158228 None:intergenic 45.0%
AGGATCTGACTATCTTGGCA+AGG + Chr7:86155811-86155830 MsG0780041076.01.T01:CDS 45.0%
AGGTGTATAATCAGCACAGG+AGG - Chr7:86158292-86158311 None:intergenic 45.0%
ATATAGCCAACCCAAGCAAC+CGG - Chr7:86160076-86160095 None:intergenic 45.0%
ATCACATTGAAAGCGGGAAC+AGG - Chr7:86157308-86157327 None:intergenic 45.0%
ATGTCCAAAAAGGCTGGATG+GGG + Chr7:86159156-86159175 MsG0780041076.01.T01:CDS 45.0%
ATTGCCTTCTGAACTCTCTG+TGG - Chr7:86158956-86158975 None:intergenic 45.0%
CAAACTCAAGCACACGAGAA+CGG - Chr7:86157387-86157406 None:intergenic 45.0%
CACGACTGTCAAAGATCTGA+CGG - Chr7:86155158-86155177 None:intergenic 45.0%
CATTGCCGGTAACAAGAACT+TGG + Chr7:86157277-86157296 MsG0780041076.01.T01:CDS 45.0%
CCCCAACATTCAGGAAAACA+AGG + Chr7:86157881-86157900 MsG0780041076.01.T01:CDS 45.0%
CTCACAGAAGATATCTGGAG+AGG + Chr7:86158684-86158703 MsG0780041076.01.T01:CDS 45.0%
CTTCATGGCTTCCTTGAAAG+AGG - Chr7:86157482-86157501 None:intergenic 45.0%
CTTGCCTTTATGCAACGAAC+AGG + Chr7:86156618-86156637 MsG0780041076.01.T01:intron 45.0%
GACATGGATCCAACTAACAG+AGG - Chr7:86156949-86156968 None:intergenic 45.0%
GAGCACTATGCTAAGATGAC+CGG + Chr7:86158787-86158806 MsG0780041076.01.T01:CDS 45.0%
GAGGCTCTTGAGTTAAGAGA+TGG + Chr7:86155788-86155807 MsG0780041076.01.T01:CDS 45.0%
GAGTGAAGCATACATACCAG+TGG - Chr7:86155376-86155395 None:intergenic 45.0%
GATCAATGCTGGTGCAATGA+TGG - Chr7:86156433-86156452 None:intergenic 45.0%
GATGGAGGATCTGACTATCT+TGG + Chr7:86155806-86155825 MsG0780041076.01.T01:CDS 45.0%
GATGTCCAAAAAGGCTGGAT+GGG + Chr7:86159155-86159174 MsG0780041076.01.T01:CDS 45.0%
GCAACCAAACTTTACTCCAC+CGG + Chr7:86160054-86160073 MsG0780041076.01.T01:three_prime_UTR 45.0%
GCAGCTATTGAGAATTGAGG+AGG + Chr7:86159614-86159633 MsG0780041076.01.T01:intron 45.0%
GCAGGTGCCAAGAAAAAATC+AGG - Chr7:86156389-86156408 None:intergenic 45.0%
GCATATGTGGATAGACACCA+GGG - Chr7:86157713-86157732 None:intergenic 45.0%
GCTCTTGAGTTAAGAGATGG+AGG + Chr7:86155791-86155810 MsG0780041076.01.T01:CDS 45.0%
GGAAAGTCGGTTGAAGAGAA+GGG - Chr7:86158208-86158227 None:intergenic 45.0%
GGAAGTCTATCACCATCTGA+AGG + Chr7:86157510-86157529 MsG0780041076.01.T01:CDS 45.0%
GGATCTGACTATCTTGGCAA+GGG + Chr7:86155812-86155831 MsG0780041076.01.T01:CDS 45.0%
GGCTTCAATACTCTCAGTCA+CGG - Chr7:86159130-86159149 None:intergenic 45.0%
GTCTATCACCATCTGAAGGT+CGG + Chr7:86157514-86157533 MsG0780041076.01.T01:intron 45.0%
TCTCAGTCACGGATCCAATT+TGG - Chr7:86159119-86159138 None:intergenic 45.0%
TGAGCAATGAGATTTGGCTG+CGG + Chr7:86159739-86159758 MsG0780041076.01.T01:three_prime_UTR 45.0%
TGCAGCTTCTGAGTTCTACA+AGG + Chr7:86158075-86158094 MsG0780041076.01.T01:CDS 45.0%
TTGAGAATTGAGGAGGAGCT+TGG + Chr7:86159621-86159640 MsG0780041076.01.T01:CDS 45.0%
TTTGCAATATGCTGCACCCA+CGG - Chr7:86157257-86157276 None:intergenic 45.0%
! AGCCTTTTTGGACATCCTGA+CGG - Chr7:86159151-86159170 None:intergenic 45.0%
! AGGATTTGAGACTTCTGAGC+GGG - Chr7:86158181-86158200 None:intergenic 45.0%
! ATCCTTTTGACCAGGATGAC+TGG + Chr7:86158764-86158783 MsG0780041076.01.T01:CDS 45.0%
! CTAATTGGTTGGTGCTCACT+TGG + Chr7:86159592-86159611 MsG0780041076.01.T01:intron 45.0%
! GGTGTAACCAGCTTTGTCAA+TGG - Chr7:86157931-86157950 None:intergenic 45.0%
! GTAACCAGCTTTGTCAATGG+CGG - Chr7:86157928-86157947 None:intergenic 45.0%
! TCCTTTTGACCAGGATGACT+GGG + Chr7:86158765-86158784 MsG0780041076.01.T01:CDS 45.0%
! TCTTGGCAAGGGTGTATCAA+AGG + Chr7:86155823-86155842 MsG0780041076.01.T01:CDS 45.0%
! TGCAATGATGGTGTTCACGT+TGG - Chr7:86156421-86156440 None:intergenic 45.0%
!! AGCGAAAGTACCATCGGATA+CGG - Chr7:86155328-86155347 None:intergenic 45.0%
!! AGCTCTAGCGAAAGTACCAT+CGG - Chr7:86155334-86155353 None:intergenic 45.0%
!! ATGGGGTTGGTGCAAACAAA+AGG + Chr7:86156705-86156724 MsG0780041076.01.T01:CDS 45.0%
!!! GATTTTTTCTTGGCACCTGC+AGG + Chr7:86156389-86156408 MsG0780041076.01.T01:intron 45.0%
!! TTTGAAAAATATTATAAAAT+AGG + Chr7:86155625-86155644 MsG0780041076.01.T01:intron 5.0%
AAGTCCGCCATTGACAAAGC+TGG + Chr7:86157921-86157940 MsG0780041076.01.T01:CDS 50.0%
AATATGCTGCACCCACGGAA+TGG - Chr7:86157252-86157271 None:intergenic 50.0%
AGCCGTCAGGATGTCCAAAA+AGG + Chr7:86159146-86159165 MsG0780041076.01.T01:CDS 50.0%
AGCTTCTAGTATGGCTCGAC+AGG - Chr7:86159684-86159703 None:intergenic 50.0%
ATACCAGTGGATGCACCACT+AGG - Chr7:86155363-86155382 None:intergenic 50.0%
CAATAAAACCTGAGGCTCGG+TGG - Chr7:86160152-86160171 None:intergenic 50.0%
CATACCTTGCCGATCAATGC+TGG - Chr7:86156444-86156463 None:intergenic 50.0%
CATGGCTTCCTTGAAAGAGG+AGG - Chr7:86157479-86157498 None:intergenic 50.0%
CGGTTGAAGAGAAGGGAGTA+AGG - Chr7:86158201-86158220 None:intergenic 50.0%
CGTCAGATCTTTGACAGTCG+TGG + Chr7:86155156-86155175 MsG0780041076.01.T01:CDS 50.0%
CTTCTAGTATGGCTCGACAG+GGG - Chr7:86159682-86159701 None:intergenic 50.0%
GAAGGCTCAGAAGGATCCAT+TGG - Chr7:86156173-86156192 None:intergenic 50.0%
GAAGTGAAGACGAACCTCGA+CGG - Chr7:86155190-86155209 None:intergenic 50.0%
GACGGCTCACAGAAGATATC+TGG + Chr7:86158679-86158698 MsG0780041076.01.T01:CDS 50.0%
GACTTCCACACCCATCTTCA+TGG - Chr7:86157497-86157516 None:intergenic 50.0%
GATGCAAACCGACCTTCAGA+TGG - Chr7:86157525-86157544 None:intergenic 50.0%
GATGGAGGTAATAGCAGCCA+TGG - Chr7:86155130-86155149 None:intergenic 50.0%
GCAACCGGTGGAGTAAAGTT+TGG - Chr7:86160061-86160080 None:intergenic 50.0%
GCTAAGATGACCGGTGAGAT+TGG + Chr7:86158796-86158815 MsG0780041076.01.T01:intron 50.0%
GCTTCTAGTATGGCTCGACA+GGG - Chr7:86159683-86159702 None:intergenic 50.0%
GGATGTCCAAAAAGGCTGGA+TGG + Chr7:86159154-86159173 MsG0780041076.01.T01:CDS 50.0%
GGCTGCTATTACCTCCATCA+AGG + Chr7:86155131-86155150 MsG0780041076.01.T01:CDS 50.0%
GGGTCCTGTTCGTTGCATAA+AGG - Chr7:86156625-86156644 None:intergenic 50.0%
GTCAGGATGTCCAAAAAGGC+TGG + Chr7:86159150-86159169 MsG0780041076.01.T01:CDS 50.0%
GTGTCCACAGAGAGTTCAGA+AGG + Chr7:86158949-86158968 MsG0780041076.01.T01:CDS 50.0%
TCCCAGTCATCCTGGTCAAA+AGG - Chr7:86158769-86158788 None:intergenic 50.0%
TCTCTTGCAGTGTGCAAAGC+TGG + Chr7:86156850-86156869 MsG0780041076.01.T01:CDS 50.0%
TCTCTTGGTTACCAACCCCA+AGG + Chr7:86158846-86158865 MsG0780041076.01.T01:intron 50.0%
TGTTGGAGCCTCCTCTTTCA+AGG + Chr7:86157468-86157487 MsG0780041076.01.T01:CDS 50.0%
TGTTTGCAGTGGAGAGACTG+AGG + Chr7:86159308-86159327 MsG0780041076.01.T01:intron 50.0%
TTGAAAGAGGAGGCTCCAAC+AGG - Chr7:86157469-86157488 None:intergenic 50.0%
! AAAGATCTGACGGGCCTTGA+TGG - Chr7:86155148-86155167 None:intergenic 50.0%
! ACTTTACTCCACCGGTTGCT+TGG + Chr7:86160062-86160081 MsG0780041076.01.T01:three_prime_UTR 50.0%
! CTTTACTCCACCGGTTGCTT+GGG + Chr7:86160063-86160082 MsG0780041076.01.T01:three_prime_UTR 50.0%
! GGATTTGAGACTTCTGAGCG+GGG - Chr7:86158180-86158199 None:intergenic 50.0%
! TCAGCACAGGAGGCATAATG+AGG - Chr7:86158282-86158301 None:intergenic 50.0%
!! CTGAGAGTATTGAAGCCGTC+AGG + Chr7:86159133-86159152 MsG0780041076.01.T01:CDS 50.0%
AGACTTCTGAGCGGGGAGAT+TGG - Chr7:86158173-86158192 None:intergenic 55.0%
AGTATGGCTCGACAGGGGTA+CGG - Chr7:86159677-86159696 None:intergenic 55.0%
ATGTGGATAGACACCAGGGC+TGG - Chr7:86157709-86157728 None:intergenic 55.0%
CATAGTGCTCCCAGTCATCC+TGG - Chr7:86158777-86158796 None:intergenic 55.0%
GCGTCTTGCCAAGTACAACC+AGG + Chr7:86159500-86159519 MsG0780041076.01.T01:CDS 55.0%
GCTAGAGCTGCTGTTCCTAG+TGG + Chr7:86155345-86155364 MsG0780041076.01.T01:CDS 55.0%
GGAAGCCATGAAGATGGGTG+TGG + Chr7:86157489-86157508 MsG0780041076.01.T01:CDS 55.0%
GGGGCTGACAAGTTATCCTC+TGG + Chr7:86159861-86159880 MsG0780041076.01.T01:three_prime_UTR 55.0%
GTGTCATGACCAGCCACAGA+AGG + Chr7:86159178-86159197 MsG0780041076.01.T01:CDS 55.0%
GTTCCTAGTGGTGCATCCAC+TGG + Chr7:86155357-86155376 MsG0780041076.01.T01:CDS 55.0%
TCTGAGCGGGGAGATTGGTA+TGG - Chr7:86158168-86158187 None:intergenic 55.0%
TCTGTGAGCCGTCGTTGTTC+TGG - Chr7:86158672-86158691 None:intergenic 55.0%
TGAAGACGAACCTCGACGGT+AGG - Chr7:86155186-86155205 None:intergenic 55.0%
! GACACCCCATCCAGCCTTTT+TGG - Chr7:86159163-86159182 None:intergenic 55.0%
! GGTGCTGAAGCAGTGTATGC+TGG + Chr7:86159642-86159661 MsG0780041076.01.T01:CDS 55.0%
! TGGCTTTGCCCCCAACATTC+AGG + Chr7:86157872-86157891 MsG0780041076.01.T01:CDS 55.0%
! TTAAGACCGGAGCACCTTGC+AGG + Chr7:86159472-86159491 MsG0780041076.01.T01:CDS 55.0%
!! GGGTGTCGACTATGTTGCTG+CGG - Chr7:86157160-86157179 None:intergenic 55.0%
!! TGCACCAGCATTGATCGGCA+AGG + Chr7:86156437-86156456 MsG0780041076.01.T01:CDS 55.0%
ACCATCTACCACCGAGCCTC+AGG + Chr7:86160141-86160160 MsG0780041076.01.T01:three_prime_UTR 60.0%
AGTCTCCTTTGTGCCAGCCC+TGG + Chr7:86157693-86157712 MsG0780041076.01.T01:intron 60.0%
GCAAGACGCTCTGACCTGCA+AGG - Chr7:86159489-86159508 None:intergenic 60.0%
TAGCCAACCCAAGCAACCGG+TGG - Chr7:86160073-86160092 None:intergenic 60.0%
TCACGTTGGCAACAGCCTGC+AGG - Chr7:86156407-86156426 None:intergenic 60.0%
TCGTGGCAATCCTACCGTCG+AGG + Chr7:86155173-86155192 MsG0780041076.01.T01:CDS 60.0%
! ACTCCACCGGTTGCTTGGGT+TGG + Chr7:86160067-86160086 MsG0780041076.01.T01:three_prime_UTR 60.0%
! AGACACCAGGGCTGGCACAA+AGG - Chr7:86157701-86157720 None:intergenic 60.0%
! CTCTGACCTGCAAGGTGCTC+CGG - Chr7:86159481-86159500 None:intergenic 60.0%
! GATCTGACGGGCCTTGATGG+AGG - Chr7:86155145-86155164 None:intergenic 60.0%
!! ACCTGAGGCTCGGTGGTAGA+TGG - Chr7:86160145-86160164 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 86155047 86160505 86155047 ID=MsG0780041076.01;Name=MsG0780041076.01
Chr7 mRNA 86155047 86160505 86155047 ID=MsG0780041076.01.T01;Parent=MsG0780041076.01;Name=MsG0780041076.01.T01;_AED=0.49;_eAED=0.49;_QI=82|0.93|0.87|1|1|1|16|807|439
Chr7 exon 86155047 86155194 86155047 ID=MsG0780041076.01.T01:exon:19578;Parent=MsG0780041076.01.T01
Chr7 exon 86155315 86155378 86155315 ID=MsG0780041076.01.T01:exon:19579;Parent=MsG0780041076.01.T01
Chr7 exon 86155780 86155844 86155780 ID=MsG0780041076.01.T01:exon:19580;Parent=MsG0780041076.01.T01
Chr7 exon 86156411 86156458 86156411 ID=MsG0780041076.01.T01:exon:19581;Parent=MsG0780041076.01.T01
Chr7 exon 86156640 86156726 86156640 ID=MsG0780041076.01.T01:exon:19582;Parent=MsG0780041076.01.T01
Chr7 exon 86156823 86156903 86156823 ID=MsG0780041076.01.T01:exon:19583;Parent=MsG0780041076.01.T01
Chr7 exon 86157266 86157367 86157266 ID=MsG0780041076.01.T01:exon:19584;Parent=MsG0780041076.01.T01
Chr7 exon 86157451 86157531 86157451 ID=MsG0780041076.01.T01:exon:19585;Parent=MsG0780041076.01.T01
Chr7 exon 86157819 86157956 86157819 ID=MsG0780041076.01.T01:exon:19586;Parent=MsG0780041076.01.T01
Chr7 exon 86158055 86158132 86158055 ID=MsG0780041076.01.T01:exon:19587;Parent=MsG0780041076.01.T01
Chr7 exon 86158673 86158808 86158673 ID=MsG0780041076.01.T01:exon:19588;Parent=MsG0780041076.01.T01
Chr7 exon 86158915 86159009 86158915 ID=MsG0780041076.01.T01:exon:19589;Parent=MsG0780041076.01.T01
Chr7 exon 86159111 86159199 86159111 ID=MsG0780041076.01.T01:exon:19590;Parent=MsG0780041076.01.T01
Chr7 exon 86159317 86159368 86159317 ID=MsG0780041076.01.T01:exon:19591;Parent=MsG0780041076.01.T01
Chr7 exon 86159465 86159521 86159465 ID=MsG0780041076.01.T01:exon:19592;Parent=MsG0780041076.01.T01
Chr7 exon 86159618 86160505 86159618 ID=MsG0780041076.01.T01:exon:19593;Parent=MsG0780041076.01.T01
Chr7 five_prime_UTR 86155047 86155128 86155047 ID=MsG0780041076.01.T01:five_prime_utr;Parent=MsG0780041076.01.T01
Chr7 CDS 86155129 86155194 86155129 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86155315 86155378 86155315 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86155780 86155844 86155780 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86156411 86156458 86156411 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86156640 86156726 86156640 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86156823 86156903 86156823 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86157266 86157367 86157266 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86157451 86157531 86157451 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86157819 86157956 86157819 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86158055 86158132 86158055 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86158673 86158808 86158673 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86158915 86159009 86158915 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86159111 86159199 86159111 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86159317 86159368 86159317 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86159465 86159521 86159465 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 CDS 86159618 86159698 86159618 ID=MsG0780041076.01.T01:cds;Parent=MsG0780041076.01.T01
Chr7 three_prime_UTR 86159699 86160505 86159699 ID=MsG0780041076.01.T01:three_prime_utr;Parent=MsG0780041076.01.T01
Gene Sequence

>MsG0780041076.01.T01

ATGGCTGCTATTACCTCCATCAAGGCCCGTCAGATCTTTGACAGTCGTGGCAATCCTACCGTCGAGGTTGATATAACCGTATCCGATGGTACTTTCGCTAGAGCTGCTGTTCCTAGTGGTGCATCCACTGGTATTTACGAGGCTCTTGAGTTAAGAGATGGAGGATCTGACTATCTTGGCAAGGGTGTATCAAAGGCTGTTGCCAACGTGAACACCATCATTGCACCAGCATTGATCGGCAAGGACCCAACTCAGCAGACAGAAATTGACAACTTCATGGTTCAGAAGCTTGACGGAACTGTTAATGAATGGGGTTGGTGCAAACAAAAGCTTGGTGCCAATGCCATATTAGCAGTGTCTCTTGCAGTGTGCAAAGCTGGTGCTAATGTCCTAAAGATTCCTCTATACAAGCATATTGCAAACATTGCCGGTAACAAGAACTTGGTTTTGCCTGTTCCCGCTTTCAATGTGATTAATGGTGGATCACATGCAGGAAACAAACTTGCAATGCAGGAGTTTATGGTTCTTCCTGTTGGAGCCTCCTCTTTCAAGGAAGCCATGAAGATGGGTGTGGAAGTCTATCACCATCTGAAGGCTGTGATTAAGAAGAAATATGGTCAAGATGCAGTAAATGTTGGTGATGAAGGTGGCTTTGCCCCCAACATTCAGGAAAACAAGGAAGGTTTGGAATTGCTAAAGTCCGCCATTGACAAAGCTGGTTACACCGGCAAAGTTGTCATTGGAATGGATGTTGCAGCTTCTGAGTTCTACAAGGAGGACAAATCATACGATTTGAACTTCAAGGAAGATAACAACGACGGCTCACAGAAGATATCTGGAGAGGCTTTGAAAGATCTCTACAAGTCATTTGTGTCAGAGTACCCAATTGTTTCAATTGAGGATCCTTTTGACCAGGATGACTGGGAGCACTATGCTAAGATGACCGAAAGATTGTCCTCTGATTTGTTGCTTTTTGCTTTGTGTCCACAGAGAGTTCAGAAGGCAATTGACTCAAAAGCATGCAATGCTCTTTTGCTCAAGGTCAACCAAATTGGATCCGTGACTGAGAGTATTGAAGCCGTCAGGATGTCCAAAAAGGCTGGATGGGGTGTCATGACCAGCCACAGAAGTGGAGAGACTGAGGATACCTTCATTGCTGATCTTGCTGTTGGTTTGTCAACGGGTCAAATTAAGACCGGAGCACCTTGCAGGTCAGAGCGTCTTGCCAAGTACAACCAGCTATTGAGAATTGAGGAGGAGCTTGGTGCTGAAGCAGTGTATGCTGGAGCAAACTTCCGTACCCCTGTCGAGCCATACTAG
Protein sequence

>MsG0780041076.01.T01

MAAITSIKARQIFDSRGNPTVEVDITVSDGTFARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVANVNTIIAPALIGKDPTQQTEIDNFMVQKLDGTVNEWGWCKQKLGANAILAVSLAVCKAGANVLKIPLYKHIANIAGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMVLPVGASSFKEAMKMGVEVYHHLKAVIKKKYGQDAVNVGDEGGFAPNIQENKEGLELLKSAIDKAGYTGKVVIGMDVAASEFYKEDKSYDLNFKEDNNDGSQKISGEALKDLYKSFVSEYPIVSIEDPFDQDDWEHYAKMTERLSSDLLLFALCPQRVQKAIDSKACNALLLKVNQIGSVTESIEAVRMSKKAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGANFRTPVEPY*