AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046633.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046633.01.T01 MTR_4g112680 88.000 475 7 2 92 565 176 601 0.0 828
MsG0880046633.01.T01 MTR_4g112680 98.054 411 7 1 92 501 176 586 0.0 819
MsG0880046633.01.T01 MTR_5g077610 80.805 323 12 2 244 565 251 524 7.62e-179 515
MsG0880046633.01.T01 MTR_5g077610 88.710 62 7 0 92 153 177 238 3.43e-27 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046633.01.T01 AT1G72550 60.663 483 121 7 92 565 176 598 0.0 566
MsG0880046633.01.T01 AT1G72550 67.233 412 115 6 92 494 176 576 0.0 553

Find 111 sgRNAs with CRISPR-Local

Find 383 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATTCTTGTGTATTCTTTC+AGG 0.138460 8:+75963060 MsG0880046633.01.T01:CDS
CTTTCCCTTGTAAATAATTC+TGG 0.192735 8:-75962723 None:intergenic
AGTGGGTGATATAGCTATTT+TGG 0.214815 8:+75962272 MsG0880046633.01.T01:CDS
GAATGTGCACCATTGATAAT+TGG 0.237999 8:-75958965 None:intergenic
GTTTCTCTATCTTACATTAC+TGG 0.270965 8:+75959278 MsG0880046633.01.T01:CDS
TCAAGCAATAGTCGATAATA+AGG 0.276554 8:+75960157 MsG0880046633.01.T01:CDS
AAGGATGTTGCAATAGCTTA+TGG 0.290042 8:+75960116 MsG0880046633.01.T01:intron
GTTTCACCTGGCAATAAATC+AGG 0.291932 8:+75962537 MsG0880046633.01.T01:CDS
AAATAAACCTCGTAGGTAAA+AGG 0.320743 8:-75957013 None:intergenic
CACTCATGATCTGGATAAAC+TGG 0.323256 8:+75956985 MsG0880046633.01.T01:CDS
GGAAAGCAAGTTGGGACTTT+CGG 0.332072 8:+75962740 MsG0880046633.01.T01:CDS
TGATTTATCTGTCTACAATA+TGG 0.344940 8:+75959253 MsG0880046633.01.T01:CDS
CATGGCAGGAAAGGAGCTTC+AGG 0.351391 8:+75957536 MsG0880046633.01.T01:intron
TGCATTTAACTTTCATGCTC+TGG 0.355506 8:-75957046 None:intergenic
ATCATATATAACAGGATAAA+CGG 0.355806 8:-75957810 None:intergenic
TCTTACATTACTGGATTGAT+TGG 0.356453 8:+75959287 MsG0880046633.01.T01:CDS
TGGATTGATTGGAGTATCAT+TGG 0.362419 8:+75959298 MsG0880046633.01.T01:CDS
ATGAACTGAGTGATCTTATC+AGG 0.362708 8:+75960222 MsG0880046633.01.T01:CDS
AATGTGCACCATTGATAATT+GGG 0.369691 8:-75958964 None:intergenic
TAATATATGTAGATAATTCA+TGG 0.381064 8:+75962474 MsG0880046633.01.T01:intron
TAACTTTACGCCACTAAAAC+AGG 0.388933 8:+75957308 MsG0880046633.01.T01:CDS
AACATTGAAAGTTTCTTGTA+AGG 0.390477 8:+75963130 MsG0880046633.01.T01:CDS
CTCTTACTATCATATATAAC+AGG 0.393037 8:-75957818 None:intergenic
GTTTCCAATGATAACCGCTT+TGG 0.394361 8:-75960558 None:intergenic
TGCCATTGGCACTCATGATC+TGG 0.394651 8:+75956976 MsG0880046633.01.T01:CDS
CTTTGGATTTGTCATCTTTG+CGG 0.401547 8:-75960541 None:intergenic
AAGGAGCCCGAGTTTCTTGC+TGG 0.402695 8:+75962692 MsG0880046633.01.T01:intron
TCTTCATCCATGTGATGTTA+TGG 0.411069 8:+75959999 MsG0880046633.01.T01:CDS
AAATCCAAAGCGGTTATCAT+TGG 0.422943 8:+75960554 MsG0880046633.01.T01:CDS
GGTTGCAATGATTGGGTTCA+CGG 0.426023 8:+75960466 MsG0880046633.01.T01:intron
TAATACCCTGATTTATTGCC+AGG 0.428298 8:-75962543 None:intergenic
TTTACAAGGGAAAGCAAGTT+GGG 0.428310 8:+75962732 MsG0880046633.01.T01:CDS
TCAGAAGAAATCACTTCAAC+TGG 0.435278 8:-75959209 None:intergenic
TTCTTAGGTAACAGCCTTTG+CGG 0.437722 8:+75959157 MsG0880046633.01.T01:intron
TCTACAAAGGAGCAGGGATC+AGG 0.438844 8:-75963103 None:intergenic
AGGTTATCAAGTTCTTAAAC+CGG 0.448754 8:+75959893 MsG0880046633.01.T01:intron
TTTATTATATTCAGGCTGTT+CGG 0.451445 8:+75961097 MsG0880046633.01.T01:intron
TACCTTTATGGGCTTGGTGG+TGG 0.454533 8:-75961163 None:intergenic
AATTATCAATGGTGCACATT+CGG 0.457633 8:+75958967 MsG0880046633.01.T01:CDS
GCTTGGCGTGCAATTGCATC+CGG 0.459634 8:-75959912 None:intergenic
GAAATTCTTGCATATAATTG+AGG 0.460329 8:+75957781 MsG0880046633.01.T01:CDS
CGAAGAACCCTTGTTGCCAT+TGG 0.462662 8:+75956962 MsG0880046633.01.T01:CDS
GACAAAGTAATGGAAAAGAA+TGG 0.463860 8:+75962504 MsG0880046633.01.T01:CDS
CTGTTATATATGATAGTAAG+AGG 0.467004 8:+75957819 MsG0880046633.01.T01:CDS
CCCTAGGTCTTCAGACTTCG+AGG 0.469190 8:+75960580 MsG0880046633.01.T01:CDS
CAACTTGCTGCACTTTATTG+TGG 0.471831 8:+75962327 MsG0880046633.01.T01:CDS
AACCACCACCAAGCCCATAA+AGG 0.472926 8:+75961161 MsG0880046633.01.T01:CDS
ATTGTCAGATGTAGATTGCT+TGG 0.473464 8:-75959929 None:intergenic
GTTGAAGTGATTTCTTCTGA+TGG 0.480187 8:+75959212 MsG0880046633.01.T01:CDS
CTTTATTGTGGTGCTAATGC+AGG 0.484538 8:+75962339 MsG0880046633.01.T01:CDS
ACAAAGTAATGGAAAAGAAT+GGG 0.485498 8:+75962505 MsG0880046633.01.T01:CDS
TATGTAGATAATTCATGGAT+TGG 0.491822 8:+75962479 MsG0880046633.01.T01:intron
GGCGTAAAGTTAATGCTTGA+AGG 0.493990 8:-75957297 None:intergenic
GTTGAGTTCTACAAAGGAGC+AGG 0.496069 8:-75963110 None:intergenic
ATTTACAAGGGAAAGCAAGT+TGG 0.498692 8:+75962731 MsG0880046633.01.T01:CDS
ATATTGTAGACAGATAAATC+AGG 0.503919 8:-75959251 None:intergenic
TCATATATAACAGGATAAAC+GGG 0.506658 8:-75957809 None:intergenic
CTTCAGGGCTGATGAGCTCA+TGG 0.507491 8:+75957552 MsG0880046633.01.T01:CDS
CACAATAAAGTGCAGCAAGT+TGG 0.507820 8:-75962326 None:intergenic
ATGGCAGGAAAGGAGCTTCA+GGG 0.512062 8:+75957537 MsG0880046633.01.T01:intron
TGCACATTCGGCCATCACTC+TGG 0.515047 8:+75958979 MsG0880046633.01.T01:CDS
GTCATCTTTGCGGTTTAGCA+TGG 0.515102 8:-75960531 None:intergenic
TGGTGCTAATGCAGGATTTG+AGG 0.524398 8:+75962347 MsG0880046633.01.T01:CDS
GGGATTACCTTTGTTTCACC+TGG 0.524967 8:+75962525 MsG0880046633.01.T01:CDS
TCAGTGATCACAAGTACCTC+TGG 0.528314 8:-75962773 None:intergenic
TGAAGAACATCACTTCTAGT+AGG 0.530614 8:-75959982 None:intergenic
CAAGCAATAGTCGATAATAA+GGG 0.535585 8:+75960158 MsG0880046633.01.T01:CDS
TGGATTGGTGGACAAAGTAA+TGG 0.536375 8:+75962494 MsG0880046633.01.T01:CDS
AATAAAGTGCAGCAAGTTGG+CGG 0.542172 8:-75962323 None:intergenic
TAAATGTCTCTATATGTACT+TGG 0.542184 8:+75963011 MsG0880046633.01.T01:CDS
TTTCACCTGGCAATAAATCA+GGG 0.544273 8:+75962538 MsG0880046633.01.T01:CDS
TTGTCTACCAGCAAGAAACT+CGG 0.549695 8:-75962699 None:intergenic
TTATGGATTCAATGCTATCA+AGG 0.552332 8:+75960133 MsG0880046633.01.T01:CDS
TTCAATGTTGAGTTCTACAA+AGG 0.554393 8:-75963116 None:intergenic
CATGAGTGCCAATGGCAACA+AGG 0.555869 8:-75956970 None:intergenic
CGCCTTTGTCAGATCAGTAG+CGG 0.559080 8:-75959029 None:intergenic
CGTACCTCCATAACATCACA+TGG 0.567623 8:-75960006 None:intergenic
GTTCGGACTAGTCTTATGCC+TGG 0.571820 8:+75961114 MsG0880046633.01.T01:CDS
GTTCTTTGTCTCCAGAGTGA+TGG 0.574319 8:-75958990 None:intergenic
GAGTGATCTTATCAGGAAAG+AGG 0.577163 8:+75960229 MsG0880046633.01.T01:CDS
ACAAGCCAGAATTATTTACA+AGG 0.578446 8:+75962718 MsG0880046633.01.T01:CDS
ATTGATTGGAGTATCATTGG+AGG 0.580668 8:+75959301 MsG0880046633.01.T01:CDS
GTAGATAATTCATGGATTGG+TGG 0.581167 8:+75962482 MsG0880046633.01.T01:intron
ATCCAGATCATGAGTGCCAA+TGG 0.581777 8:-75956978 None:intergenic
AGTATCATTGGAGGCTGAAG+AGG 0.587702 8:+75959310 MsG0880046633.01.T01:CDS
TTTATTGCCAGGTGAAACAA+AGG 0.592411 8:-75962532 None:intergenic
CATGAAAGTTAAATGCATTG+TGG 0.593503 8:+75957052 MsG0880046633.01.T01:CDS
CGGTTATCATTGGAAACCCT+AGG 0.598422 8:+75960564 MsG0880046633.01.T01:CDS
AGAGATACAGTCTACTCCAC+AGG 0.598800 8:-75962981 None:intergenic
CCTCGAAGTCTGAAGACCTA+GGG 0.605286 8:-75960580 None:intergenic
ATGTGCACCATTGATAATTG+GGG 0.605503 8:-75958963 None:intergenic
TCATCCATGTGATGTTATGG+AGG 0.610955 8:+75960002 MsG0880046633.01.T01:CDS
TGTCTACCAGCAAGAAACTC+GGG 0.611259 8:-75962698 None:intergenic
TTGAAAGAAATAAACCTCGT+AGG 0.617252 8:-75957020 None:intergenic
ATGAGTGCCAATGGCAACAA+GGG 0.618707 8:-75956969 None:intergenic
TATTGTAGACAGATAAATCA+GGG 0.619471 8:-75959250 None:intergenic
TTTCGGCATTGTTCATCCAG+AGG 0.619823 8:+75962757 MsG0880046633.01.T01:CDS
ATTCAGAGGAAGTAGTGTCA+AGG 0.626298 8:-75960201 None:intergenic
TCATGATCTGGATAAACTGG+AGG 0.627307 8:+75956988 MsG0880046633.01.T01:CDS
CAAGCCAGAATTATTTACAA+GGG 0.630616 8:+75962719 MsG0880046633.01.T01:CDS
ACCTCGAAGTCTGAAGACCT+AGG 0.633248 8:-75960581 None:intergenic
AGATCACTCAGTTCATTCAG+AGG 0.635412 8:-75960215 None:intergenic
AGAACATCACTTCTAGTAGG+AGG 0.638419 8:-75959979 None:intergenic
TTGAGTTCTACAAAGGAGCA+GGG 0.644199 8:-75963109 None:intergenic
AATCAGGGTATTATATTGAG+CGG 0.647552 8:+75962553 MsG0880046633.01.T01:CDS
CACCGCTACTGATCTGACAA+AGG 0.649634 8:+75959027 MsG0880046633.01.T01:CDS
TGTGCACCATTGATAATTGG+GGG 0.655257 8:-75958962 None:intergenic
CATGATCTGGATAAACTGGA+GGG 0.664709 8:+75956989 MsG0880046633.01.T01:CDS
GTAAAGTTAATGCTTGAAGG+TGG 0.674946 8:-75957294 None:intergenic
TGCAATGATTGGGTTCACGG+AGG 0.698743 8:+75960469 MsG0880046633.01.T01:CDS
CAAAGATGACAAATCCAAAG+CGG 0.715673 8:+75960544 MsG0880046633.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTGTAAATATTACA+AGG + Chr8:75959721-75959740 MsG0880046633.01.T01:intron 10.0%
!! CAAAAGATAAAAATATTTAT+TGG + Chr8:75957448-75957467 MsG0880046633.01.T01:intron 10.0%
!!! AGTATTTTTTTGTTTTTTTT+GGG + Chr8:75959539-75959558 MsG0880046633.01.T01:intron 10.0%
!!! ATACTTAATTTTATATTTTG+AGG + Chr8:75959481-75959500 MsG0880046633.01.T01:intron 10.0%
!!! GAATATATTTTTTTAACTTT+TGG + Chr8:75962236-75962255 MsG0880046633.01.T01:intron 10.0%
!! ATGCATATTATAATTATCAT+TGG + Chr8:75957938-75957957 MsG0880046633.01.T01:intron 15.0%
!! GATTCATAAATATTACATAA+AGG - Chr8:75961332-75961351 None:intergenic 15.0%
!! TAAAAAAACGTTAAAATAAC+TGG + Chr8:75961499-75961518 MsG0880046633.01.T01:intron 15.0%
!! TAATATATGTAGATAATTCA+TGG + Chr8:75962474-75962493 MsG0880046633.01.T01:intron 15.0%
!! TAATATTTATGAATCATCTA+TGG + Chr8:75961337-75961356 MsG0880046633.01.T01:intron 15.0%
!! TAATCAAATCAGTAATAAAA+TGG - Chr8:75957214-75957233 None:intergenic 15.0%
!! TATATATTGGACAAAAATAT+TGG - Chr8:75961897-75961916 None:intergenic 15.0%
!! TTGTCAAAAATAATGTATAA+AGG - Chr8:75959452-75959471 None:intergenic 15.0%
!! TTTGTATCTTTATTATATTC+AGG + Chr8:75961089-75961108 MsG0880046633.01.T01:intron 15.0%
!!! AGTAATTTTATTCTATGAAA+TGG + Chr8:75961240-75961259 MsG0880046633.01.T01:intron 15.0%
!!! ATTTATTCTATTTTTCTGTT+TGG + Chr8:75957690-75957709 MsG0880046633.01.T01:intron 15.0%
!!! GAATATATTTCTTAAACTTT+TGG + Chr8:75962178-75962197 MsG0880046633.01.T01:intron 15.0%
!!! GAGTATTTTTTTGTTTTTTT+TGG + Chr8:75959538-75959557 MsG0880046633.01.T01:intron 15.0%
!!! GTAATTTTATTCTATGAAAT+GGG + Chr8:75961241-75961260 MsG0880046633.01.T01:intron 15.0%
!!! GTATTTTTTTGTTTTTTTTG+GGG + Chr8:75959540-75959559 MsG0880046633.01.T01:intron 15.0%
!!! TATGTTTTTTTTTACTTCTA+TGG + Chr8:75959748-75959767 MsG0880046633.01.T01:intron 15.0%
!!! TCTTTTTAAAAAGAAAAAGT+TGG - Chr8:75961954-75961973 None:intergenic 15.0%
!!! TTTTCTTTTGATTTATTTAG+TGG + Chr8:75961009-75961028 MsG0880046633.01.T01:intron 15.0%
!!! TTTTGTCCAATATATATTTT+TGG + Chr8:75961901-75961920 MsG0880046633.01.T01:intron 15.0%
!! AAAAATATTGGATACCAAAA+GGG - Chr8:75961885-75961904 None:intergenic 20.0%
!! AAAAGCTGTAAATTAAAATC+TGG - Chr8:75959686-75959705 None:intergenic 20.0%
!! AAAATTATGTACCAAACAAT+TGG - Chr8:75962825-75962844 None:intergenic 20.0%
!! AATAAACTGCTGAATAAAAA+GGG - Chr8:75956865-75956884 None:intergenic 20.0%
!! AATACAAATCATCAACATAA+TGG - Chr8:75960860-75960879 None:intergenic 20.0%
!! AATATAAACAAATCTGAACT+TGG - Chr8:75956700-75956719 None:intergenic 20.0%
!! AATTAAGATTGAAGAGAAAA+TGG - Chr8:75961654-75961673 None:intergenic 20.0%
!! AATTAGAATTTCAACAGATA+GGG - Chr8:75958688-75958707 None:intergenic 20.0%
!! ATAGAATAAAATTACTGCAA+AGG - Chr8:75961236-75961255 None:intergenic 20.0%
!! ATATAAGCTTACAACATAAT+TGG - Chr8:75962216-75962235 None:intergenic 20.0%
!! ATCATATATAACAGGATAAA+CGG - Chr8:75957813-75957832 None:intergenic 20.0%
!! CAACATAATAAATTACTACA+TGG + Chr8:75960368-75960387 MsG0880046633.01.T01:intron 20.0%
!! CAATTAACAGAAAATAAAGT+AGG - Chr8:75958815-75958834 None:intergenic 20.0%
!! CCTTGAAAAATTTATATACA+GGG - Chr8:75957157-75957176 None:intergenic 20.0%
!! GAAGAAATTGTGAAAAATTA+TGG - Chr8:75959873-75959892 None:intergenic 20.0%
!! GAGTTAAAATGATTACAAAA+GGG + Chr8:75962923-75962942 MsG0880046633.01.T01:intron 20.0%
!! GATGTTACCAAAAAAAAAAA+TGG + Chr8:75958036-75958055 MsG0880046633.01.T01:intron 20.0%
!! TACAAGCCAAAAATATATAT+TGG - Chr8:75961910-75961929 None:intergenic 20.0%
!! TACTGTGTTAAAAAATAATC+AGG + Chr8:75958087-75958106 MsG0880046633.01.T01:intron 20.0%
!! TATAAGCTTACAACATAATT+GGG - Chr8:75962215-75962234 None:intergenic 20.0%
!! TGAGTTAAAATGATTACAAA+AGG + Chr8:75962922-75962941 MsG0880046633.01.T01:intron 20.0%
!!! AAACTATTCTTTGTTTTCTT+AGG + Chr8:75959142-75959161 MsG0880046633.01.T01:intron 20.0%
!!! AAGTTTAAGTTTTACCTTTA+TGG - Chr8:75961178-75961197 None:intergenic 20.0%
!!! ACCAAAATCAATTTTATAGT+GGG - Chr8:75961041-75961060 None:intergenic 20.0%
!!! AGTTTAAGTTTTACCTTTAT+GGG - Chr8:75961177-75961196 None:intergenic 20.0%
!!! ATTACTGATTTGATTATATC+TGG + Chr8:75957218-75957237 MsG0880046633.01.T01:intron 20.0%
!!! ATTTCTTTTCAATCTTTTTC+AGG + Chr8:75956939-75956958 MsG0880046633.01.T01:CDS 20.0%
!!! ATTTTAAATTGAAAAGTCAG+AGG + Chr8:75958479-75958498 MsG0880046633.01.T01:intron 20.0%
!!! GAAGATTGTTTTAAATACAA+TGG + Chr8:75959051-75959070 MsG0880046633.01.T01:CDS 20.0%
!!! GGTATTATTATTTTAACGTA+TGG + Chr8:75957959-75957978 MsG0880046633.01.T01:intron 20.0%
!!! GTTTTGCAAATTTAAATATG+AGG - Chr8:75957863-75957882 None:intergenic 20.0%
!!! TAATTTTTCACAATTTCTTC+AGG + Chr8:75959873-75959892 MsG0880046633.01.T01:intron 20.0%
!!! TACCAAAATCAATTTTATAG+TGG - Chr8:75961042-75961061 None:intergenic 20.0%
!!! TATTATTTTAACGTATGGAT+GGG + Chr8:75957964-75957983 MsG0880046633.01.T01:intron 20.0%
!!! TTATATTTTGAGGTAATTGT+TGG + Chr8:75959491-75959510 MsG0880046633.01.T01:intron 20.0%
!!! TTATTATTTTAACGTATGGA+TGG + Chr8:75957963-75957982 MsG0880046633.01.T01:intron 20.0%
!!! TTTATTTTTCATGGAACAAT+TGG + Chr8:75956759-75956778 MsG0880046633.01.T01:intron 20.0%
!!! TTTCACACCATTTTTTTTTT+TGG - Chr8:75958046-75958065 None:intergenic 20.0%
!!! TTTGTAAATTTGAGTTTGAA+TGG + Chr8:75961835-75961854 MsG0880046633.01.T01:intron 20.0%
!!! TTTTCTAATGTTTTTCTTTC+AGG + Chr8:75957266-75957285 MsG0880046633.01.T01:intron 20.0%
! AAAAATTTATATACAGGGCT+TGG - Chr8:75957152-75957171 None:intergenic 25.0%
! AAAATTTATATACAGGGCTT+GGG - Chr8:75957151-75957170 None:intergenic 25.0%
! AAACTTAAACTTCTTTGTTG+TGG + Chr8:75961186-75961205 MsG0880046633.01.T01:intron 25.0%
! AAATCTGTCTATTGTCTAAA+AGG + Chr8:75958391-75958410 MsG0880046633.01.T01:intron 25.0%
! AACATAGACAATAAACTGAT+TGG - Chr8:75960337-75960356 None:intergenic 25.0%
! AAGATTAATCGGATAAACAA+AGG - Chr8:75959590-75959609 None:intergenic 25.0%
! AATAAAAAGGGAACCTAATT+TGG - Chr8:75956853-75956872 None:intergenic 25.0%
! AATTTGCATTAGCAAGAAAT+TGG - Chr8:75959345-75959364 None:intergenic 25.0%
! AGAACTATAGTAAAACAGTT+AGG + Chr8:75960794-75960813 MsG0880046633.01.T01:intron 25.0%
! AGAATAAATGAAAACCTTGT+TGG - Chr8:75957679-75957698 None:intergenic 25.0%
! ATATAAGCTTACAACATAGT+TGG - Chr8:75962158-75962177 None:intergenic 25.0%
! ATATTGTAGACAGATAAATC+AGG - Chr8:75959254-75959273 None:intergenic 25.0%
! ATTTAATATGGCCAATTGTT+TGG + Chr8:75962811-75962830 MsG0880046633.01.T01:intron 25.0%
! CAAAAATATTGGATACCAAA+AGG - Chr8:75961886-75961905 None:intergenic 25.0%
! CAATAAACTGCTGAATAAAA+AGG - Chr8:75956866-75956885 None:intergenic 25.0%
! CAATATATTGGAAAGATTTC+TGG + Chr8:75958120-75958139 MsG0880046633.01.T01:intron 25.0%
! CTAAAGAAATAGTTAAACTG+AGG + Chr8:75958010-75958029 MsG0880046633.01.T01:intron 25.0%
! CTCTTACTATCATATATAAC+AGG - Chr8:75957821-75957840 None:intergenic 25.0%
! CTGTTATATATGATAGTAAG+AGG + Chr8:75957819-75957838 MsG0880046633.01.T01:CDS 25.0%
! CTTGTAAAGTTGTATTAAAC+AGG + Chr8:75961428-75961447 MsG0880046633.01.T01:intron 25.0%
! GAAAAGAATTTGGGAATAAA+AGG - Chr8:75960445-75960464 None:intergenic 25.0%
! GAAATTCTTGCATATAATTG+AGG + Chr8:75957781-75957800 MsG0880046633.01.T01:CDS 25.0%
! GAACTATAGTAAAACAGTTA+GGG + Chr8:75960795-75960814 MsG0880046633.01.T01:intron 25.0%
! GAATAAATGAAAACCTTGTT+GGG - Chr8:75957678-75957697 None:intergenic 25.0%
! GAATTAGAATTTCAACAGAT+AGG - Chr8:75958689-75958708 None:intergenic 25.0%
! GATAGACATTTATTAGAAAG+AGG - Chr8:75958657-75958676 None:intergenic 25.0%
! GCAAAAATATAAAGCAATAC+AGG - Chr8:75960618-75960637 None:intergenic 25.0%
! GCAACATTAGTGAAAATTAA+AGG - Chr8:75958872-75958891 None:intergenic 25.0%
! GCCTTGAAAAATTTATATAC+AGG - Chr8:75957158-75957177 None:intergenic 25.0%
! GTAAGTTTATATTACTACAC+AGG + Chr8:75962582-75962601 MsG0880046633.01.T01:intron 25.0%
! GTAATTTATTATGTTGCACT+TGG - Chr8:75960364-75960383 None:intergenic 25.0%
! TAAAATAACTGGATTTCAGA+TGG + Chr8:75961510-75961529 MsG0880046633.01.T01:intron 25.0%
! TAAATGTCTCTATATGTACT+TGG + Chr8:75963011-75963030 MsG0880046633.01.T01:CDS 25.0%
! TATGTAGATAATTCATGGAT+TGG + Chr8:75962479-75962498 MsG0880046633.01.T01:intron 25.0%
! TATTGTAGACAGATAAATCA+GGG - Chr8:75959253-75959272 None:intergenic 25.0%
! TCATATATAACAGGATAAAC+GGG - Chr8:75957812-75957831 None:intergenic 25.0%
! TCTTCCAAAAACACTAAAAA+TGG + Chr8:75961700-75961719 MsG0880046633.01.T01:intron 25.0%
! TGAAATGCAGAAAGATTAAT+CGG - Chr8:75959601-75959620 None:intergenic 25.0%
! TGATTTATCTGTCTACAATA+TGG + Chr8:75959253-75959272 MsG0880046633.01.T01:CDS 25.0%
! TGTGTCATCTTGATTTAATA+TGG + Chr8:75962799-75962818 MsG0880046633.01.T01:intron 25.0%
! TTATTCTTGTGTATTCTTTC+AGG + Chr8:75963060-75963079 MsG0880046633.01.T01:CDS 25.0%
! TTCTTGCTAATGCAAATTTA+AGG + Chr8:75959347-75959366 MsG0880046633.01.T01:intron 25.0%
! TTCTTGTAAACAGATAATTG+TGG + Chr8:75958839-75958858 MsG0880046633.01.T01:intron 25.0%
! TTGTTCCATGAAAAATAAAG+TGG - Chr8:75956758-75956777 None:intergenic 25.0%
! TTTAAATCTTTCAGATTGCT+TGG - Chr8:75962071-75962090 None:intergenic 25.0%
! TTTATGAATCATCTATGGAT+TGG + Chr8:75961342-75961361 MsG0880046633.01.T01:intron 25.0%
! TTTATTATATTCAGGCTGTT+CGG + Chr8:75961097-75961116 MsG0880046633.01.T01:intron 25.0%
!! AAACTGATTGGCATATTTTA+AGG - Chr8:75960325-75960344 None:intergenic 25.0%
!! ACAAAGTAATGGAAAAGAAT+GGG + Chr8:75962505-75962524 MsG0880046633.01.T01:CDS 25.0%
!! ACTCTTTGTATGTTTTGTAA+AGG + Chr8:75958747-75958766 MsG0880046633.01.T01:intron 25.0%
!! AGTTTTCCTAACAAAAAAAC+AGG - Chr8:75962628-75962647 None:intergenic 25.0%
!! CCAAAATCAATTTTATAGTG+GGG - Chr8:75961040-75961059 None:intergenic 25.0%
!! CCCTGTATATAAATTTTTCA+AGG + Chr8:75957154-75957173 MsG0880046633.01.T01:intron 25.0%
!! TATATACATTTTTGTTGACC+TGG + Chr8:75960823-75960842 MsG0880046633.01.T01:intron 25.0%
!! TTTATTCCCAAATTCTTTTC+AGG + Chr8:75960445-75960464 MsG0880046633.01.T01:intron 25.0%
!!! ACAACCATTTTTAGTGTTTT+TGG - Chr8:75961707-75961726 None:intergenic 25.0%
!!! ACTTTTCCTGTTTTTTTGTT+AGG + Chr8:75962619-75962638 MsG0880046633.01.T01:intron 25.0%
!!! ATAAAAGTTACCTGTTTTAG+TGG - Chr8:75957321-75957340 None:intergenic 25.0%
!!! ATCTTTTGAGTATTACACAA+TGG - Chr8:75957436-75957455 None:intergenic 25.0%
!!! ATTTTTAGTGTTTTTGGAAG+AGG - Chr8:75961701-75961720 None:intergenic 25.0%
!!! TAAAAGTTGTTTTGAGCATA+TGG + Chr8:75960978-75960997 MsG0880046633.01.T01:intron 25.0%
!!! TACAAACTTGATTTTGACAT+GGG - Chr8:75961821-75961840 None:intergenic 25.0%
!!! TCTCATTTGTTTTAGTTAGT+GGG + Chr8:75958616-75958635 MsG0880046633.01.T01:intron 25.0%
!!! TGTTGCAATATTTTGGATTA+CGG + Chr8:75959118-75959137 MsG0880046633.01.T01:intron 25.0%
!!! TTACAAACTTGATTTTGACA+TGG - Chr8:75961822-75961841 None:intergenic 25.0%
AAAATCAAGAGACATAGCAT+TGG - Chr8:75961626-75961645 None:intergenic 30.0%
AAATAAACCTCGTAGGTAAA+AGG - Chr8:75957016-75957035 None:intergenic 30.0%
AATTATCAATGGTGCACATT+CGG + Chr8:75958967-75958986 MsG0880046633.01.T01:CDS 30.0%
AATTGAATTATCTACTGCAG+AGG - Chr8:75962123-75962142 None:intergenic 30.0%
ACAAGCCAGAATTATTTACA+AGG + Chr8:75962718-75962737 MsG0880046633.01.T01:CDS 30.0%
ACGATGTCAAAAACTCAATA+AGG - Chr8:75956638-75956657 None:intergenic 30.0%
ACTACTAATCAATATGGGTA+TGG - Chr8:75961780-75961799 None:intergenic 30.0%
AGAAATAGTTAAACTGAGGA+TGG + Chr8:75958014-75958033 MsG0880046633.01.T01:intron 30.0%
AGACATTTATTAGAAAGAGG+TGG - Chr8:75958654-75958673 None:intergenic 30.0%
AGATTACATTATCACCAGAT+AGG - Chr8:75960929-75960948 None:intergenic 30.0%
AGGTTATCAAGTTCTTAAAC+CGG + Chr8:75959893-75959912 MsG0880046633.01.T01:intron 30.0%
ATAAAAGGATTCAGGTAACT+AGG - Chr8:75960430-75960449 None:intergenic 30.0%
ATGCTTCAATACTTGTATAC+AGG + Chr8:75958537-75958556 MsG0880046633.01.T01:intron 30.0%
ATTGCAACCTGAAAAGAATT+TGG - Chr8:75960455-75960474 None:intergenic 30.0%
ATTTGGGAATAAAAGGATTC+AGG - Chr8:75960438-75960457 None:intergenic 30.0%
CAAGCAATAGTCGATAATAA+GGG + Chr8:75960158-75960177 MsG0880046633.01.T01:CDS 30.0%
CAAGCCAGAATTATTTACAA+GGG + Chr8:75962719-75962738 MsG0880046633.01.T01:CDS 30.0%
CATGAAAGTTAAATGCATTG+TGG + Chr8:75957052-75957071 MsG0880046633.01.T01:CDS 30.0%
CTCGACTATATATTTGCATA+CGG - Chr8:75961581-75961600 None:intergenic 30.0%
CTTATAACCAGTCTATATTC+AGG - Chr8:75959384-75959403 None:intergenic 30.0%
CTTTCCCTTGTAAATAATTC+TGG - Chr8:75962726-75962745 None:intergenic 30.0%
GCATACTAAACTAAAAGCAA+AGG - Chr8:75960955-75960974 None:intergenic 30.0%
GCTTTCTATCAGCATTAATT+AGG + Chr8:75959403-75959422 MsG0880046633.01.T01:intron 30.0%
GGAAAGAAAACAGCATAAAT+TGG - Chr8:75956832-75956851 None:intergenic 30.0%
GGATGTATGACACAATATAT+TGG + Chr8:75958108-75958127 MsG0880046633.01.T01:intron 30.0%
GGCTTGTACATATTAATTGT+TGG + Chr8:75961922-75961941 MsG0880046633.01.T01:intron 30.0%
GTTTCTCTATCTTACATTAC+TGG + Chr8:75959278-75959297 MsG0880046633.01.T01:CDS 30.0%
TAAAAAGAAAAAGTTGGCAC+TGG - Chr8:75961948-75961967 None:intergenic 30.0%
TAACATGAATCAGAATCAAC+TGG - Chr8:75962024-75962043 None:intergenic 30.0%
TCAAGCAATAGTCGATAATA+AGG + Chr8:75960157-75960176 MsG0880046633.01.T01:CDS 30.0%
TCAGTAGCAGTAAATTTACA+TGG + Chr8:75960729-75960748 MsG0880046633.01.T01:intron 30.0%
TCAGTTAATCCAATACATGT+GGG - Chr8:75960659-75960678 None:intergenic 30.0%
TCTTACATTACTGGATTGAT+TGG + Chr8:75959287-75959306 MsG0880046633.01.T01:CDS 30.0%
TTAAGTTCAGGAATCTAACA+AGG - Chr8:75961377-75961396 None:intergenic 30.0%
TTATACGACTTCTTTGATTG+AGG + Chr8:75960271-75960290 MsG0880046633.01.T01:intron 30.0%
TTATGGATTCAATGCTATCA+AGG + Chr8:75960133-75960152 MsG0880046633.01.T01:CDS 30.0%
TTCAATGTTGAGTTCTACAA+AGG - Chr8:75963119-75963138 None:intergenic 30.0%
TTCAGTTAATCCAATACATG+TGG - Chr8:75960660-75960679 None:intergenic 30.0%
TTGAAAGAAATAAACCTCGT+AGG - Chr8:75957023-75957042 None:intergenic 30.0%
TTGATTATTGAGATCTCTCT+TGG - Chr8:75957188-75957207 None:intergenic 30.0%
TTGCAACCTGAAAAGAATTT+GGG - Chr8:75960454-75960473 None:intergenic 30.0%
TTTAGCAGACTTCATATGTT+TGG + Chr8:75956477-75956496 MsG0880046633.01.T01:intron 30.0%
! AAAAATGTTTATCGCCCTTT+TGG + Chr8:75961868-75961887 MsG0880046633.01.T01:intron 30.0%
! AATCAGGGTATTATATTGAG+CGG + Chr8:75962553-75962572 MsG0880046633.01.T01:CDS 30.0%
! AATGTGCACCATTGATAATT+GGG - Chr8:75958967-75958986 None:intergenic 30.0%
! ATGCTATGTCTCTTGATTTT+AGG + Chr8:75961626-75961645 MsG0880046633.01.T01:intron 30.0%
! ATTTTCACAATATTCCGCAA+AGG - Chr8:75959174-75959193 None:intergenic 30.0%
! ATTTTGGATGACAATGATGT+TGG + Chr8:75962288-75962307 MsG0880046633.01.T01:CDS 30.0%
! GACAAAGTAATGGAAAAGAA+TGG + Chr8:75962504-75962523 MsG0880046633.01.T01:CDS 30.0%
! TTAAGTATGCAATTTTCCTG+TGG + Chr8:75962965-75962984 MsG0880046633.01.T01:CDS 30.0%
! TTGGTCGATTTCAGAAATAA+AGG - Chr8:75962052-75962071 None:intergenic 30.0%
!! AAATTCATCTTAAAGTGCTG+TGG - Chr8:75956913-75956932 None:intergenic 30.0%
!! CCCCACTATAAAATTGATTT+TGG + Chr8:75961037-75961056 MsG0880046633.01.T01:intron 30.0%
!! TATTGGAAAGATTTCTGGTA+TGG + Chr8:75958125-75958144 MsG0880046633.01.T01:intron 30.0%
!! TTATATTTTTGCTGCTGCAT+GGG + Chr8:75960626-75960645 MsG0880046633.01.T01:intron 30.0%
!! TTGATTATATCTGGTTCTCT+AGG + Chr8:75957227-75957246 MsG0880046633.01.T01:intron 30.0%
!! TTTATATTTTTGCTGCTGCA+TGG + Chr8:75960625-75960644 MsG0880046633.01.T01:intron 30.0%
!! TTTGGTTCAGATTTTTGAAG+TGG + Chr8:75962254-75962273 MsG0880046633.01.T01:intron 30.0%
!!! AAATCTTTTAGCTCTCATCT+TGG + Chr8:75957887-75957906 MsG0880046633.01.T01:intron 30.0%
!!! GTCTCATTTGTTTTAGTTAG+TGG + Chr8:75958615-75958634 MsG0880046633.01.T01:intron 30.0%
!!! TGCTGTTTTCTTTCCAAATT+AGG + Chr8:75956837-75956856 MsG0880046633.01.T01:intron 30.0%
!!! TTGGTTCAGATTTTTGAAGT+GGG + Chr8:75962255-75962274 MsG0880046633.01.T01:intron 30.0%
AAAATGCATTCCATCCTATC+TGG + Chr8:75960912-75960931 MsG0880046633.01.T01:intron 35.0%
AAACAGATAATTGTGGCACT+TGG + Chr8:75958846-75958865 MsG0880046633.01.T01:intron 35.0%
AAATCCAAAGCGGTTATCAT+TGG + Chr8:75960554-75960573 MsG0880046633.01.T01:CDS 35.0%
AACAGGAAAAGTAAAACCAG+TGG - Chr8:75962611-75962630 None:intergenic 35.0%
AACATGTGACCAATAGCAAT+AGG - Chr8:75958310-75958329 None:intergenic 35.0%
AAGGATGTTGCAATAGCTTA+TGG + Chr8:75960116-75960135 MsG0880046633.01.T01:intron 35.0%
ACAAATCTGAACTTGGAGTA+CGG - Chr8:75956693-75956712 None:intergenic 35.0%
ACAGGAAAAGTAAAACCAGT+GGG - Chr8:75962610-75962629 None:intergenic 35.0%
AGGGAGACTACTAATCAATA+TGG - Chr8:75961786-75961805 None:intergenic 35.0%
ATCAGCATTAATTAGGCTTG+AGG + Chr8:75959410-75959429 MsG0880046633.01.T01:intron 35.0%
ATGAACTGAGTGATCTTATC+AGG + Chr8:75960222-75960241 MsG0880046633.01.T01:CDS 35.0%
ATGTGTTCCTGAATATAGAC+TGG + Chr8:75959374-75959393 MsG0880046633.01.T01:intron 35.0%
ATTCAATATGCACCCATGAT+TGG - Chr8:75960043-75960062 None:intergenic 35.0%
ATTGAAAAGTCAGAGGTGAT+TGG + Chr8:75958486-75958505 MsG0880046633.01.T01:intron 35.0%
ATTGTCAGATGTAGATTGCT+TGG - Chr8:75959932-75959951 None:intergenic 35.0%
ATTTACAAGGGAAAGCAAGT+TGG + Chr8:75962731-75962750 MsG0880046633.01.T01:CDS 35.0%
CAAAGAAGTCGTATAATCTG+TGG - Chr8:75960267-75960286 None:intergenic 35.0%
CAAAGATGACAAATCCAAAG+CGG + Chr8:75960544-75960563 MsG0880046633.01.T01:CDS 35.0%
CAGGAAAGTAGTAAAGAAAG+TGG + Chr8:75961447-75961466 MsG0880046633.01.T01:intron 35.0%
CATTAGAGACATTGCATGAA+AGG - Chr8:75959792-75959811 None:intergenic 35.0%
CCAGAATATTCATAAGAAGC+AGG - Chr8:75962853-75962872 None:intergenic 35.0%
CCTGCTTCTTATGAATATTC+TGG + Chr8:75962850-75962869 MsG0880046633.01.T01:intron 35.0%
CGTATGCAAATATATAGTCG+AGG + Chr8:75961579-75961598 MsG0880046633.01.T01:intron 35.0%
CGTATTCAGAAACATCTCAA+AGG - Chr8:75957724-75957743 None:intergenic 35.0%
CTGTATCAGACTTCTATTGT+AGG + Chr8:75956362-75956381 MsG0880046633.01.T01:intron 35.0%
CTTTGGATTTGTCATCTTTG+CGG - Chr8:75960544-75960563 None:intergenic 35.0%
GGAAAACTCTTATTGTCTGT+CGG + Chr8:75956780-75956799 MsG0880046633.01.T01:intron 35.0%
GGGAGACTACTAATCAATAT+GGG - Chr8:75961785-75961804 None:intergenic 35.0%
GTAAAGTTAATGCTTGAAGG+TGG - Chr8:75957297-75957316 None:intergenic 35.0%
GTTAGTGAATGACCAATCAT+GGG + Chr8:75960028-75960047 MsG0880046633.01.T01:intron 35.0%
GTTGAAGTGATTTCTTCTGA+TGG + Chr8:75959212-75959231 MsG0880046633.01.T01:CDS 35.0%
GTTGTACTTGTAAGTTTCTG+TGG + Chr8:75956407-75956426 MsG0880046633.01.T01:intron 35.0%
TAAATGAAAACCTTGTTGGG+CGG - Chr8:75957675-75957694 None:intergenic 35.0%
TAACTTTACGCCACTAAAAC+AGG + Chr8:75957308-75957327 MsG0880046633.01.T01:CDS 35.0%
TAATACCCTGATTTATTGCC+AGG - Chr8:75962546-75962565 None:intergenic 35.0%
TACATTATCACCAGATAGGA+TGG - Chr8:75960925-75960944 None:intergenic 35.0%
TACGGAGATAACAGAACTAA+AGG - Chr8:75961563-75961582 None:intergenic 35.0%
TAGTAAAGAAAGTGGTAAGC+TGG + Chr8:75961455-75961474 MsG0880046633.01.T01:intron 35.0%
TCAGAAGAAATCACTTCAAC+TGG - Chr8:75959212-75959231 None:intergenic 35.0%
TCAGATAACAGAACCAAAGA+GGG - Chr8:75960097-75960116 None:intergenic 35.0%
TCTATTGTCTAAAAGGCTCA+GGG + Chr8:75958398-75958417 MsG0880046633.01.T01:intron 35.0%
TCTTCATCCATGTGATGTTA+TGG + Chr8:75959999-75960018 MsG0880046633.01.T01:CDS 35.0%
TCTTTACCCCCAATTATCAA+TGG + Chr8:75958956-75958975 MsG0880046633.01.T01:CDS 35.0%
TGAACACAACTGCTTATTGA+AGG + Chr8:75962673-75962692 MsG0880046633.01.T01:intron 35.0%
TGAAGAACATCACTTCTAGT+AGG - Chr8:75959985-75960004 None:intergenic 35.0%
TTCAGATAACAGAACCAAAG+AGG - Chr8:75960098-75960117 None:intergenic 35.0%
TTGAAAAGTCAGAGGTGATT+GGG + Chr8:75958487-75958506 MsG0880046633.01.T01:intron 35.0%
TTTACAAGGGAAAGCAAGTT+GGG + Chr8:75962732-75962751 MsG0880046633.01.T01:CDS 35.0%
TTTATTGCCAGGTGAAACAA+AGG - Chr8:75962535-75962554 None:intergenic 35.0%
TTTCACCTGGCAATAAATCA+GGG + Chr8:75962538-75962557 MsG0880046633.01.T01:CDS 35.0%
TTTGTTGACCTGGCATTATT+GGG + Chr8:75960833-75960852 MsG0880046633.01.T01:intron 35.0%
! AACATGTGCTTTTGCATCAA+AGG - Chr8:75957401-75957420 None:intergenic 35.0%
! AAGTTTTACCTTTATGGGCT+TGG - Chr8:75961172-75961191 None:intergenic 35.0%
! AGTGGGTGATATAGCTATTT+TGG + Chr8:75962272-75962291 MsG0880046633.01.T01:CDS 35.0%
! ATGTGCACCATTGATAATTG+GGG - Chr8:75958966-75958985 None:intergenic 35.0%
! ATTGATTGGAGTATCATTGG+AGG + Chr8:75959301-75959320 MsG0880046633.01.T01:CDS 35.0%
! CAATAGGATGCTCTGATTTT+AGG - Chr8:75958294-75958313 None:intergenic 35.0%
! GAATGTGCACCATTGATAAT+TGG - Chr8:75958968-75958987 None:intergenic 35.0%
! GACATAGCATTGGAATACAT+AGG - Chr8:75961616-75961635 None:intergenic 35.0%
! GATAGGATGGAATGCATTTT+AGG - Chr8:75960912-75960931 None:intergenic 35.0%
! GTTGTACTTGTTGATGTGTA+CGG + Chr8:75958435-75958454 MsG0880046633.01.T01:intron 35.0%
! TGCATTTAACTTTCATGCTC+TGG - Chr8:75957049-75957068 None:intergenic 35.0%
! TGGATTGATTGGAGTATCAT+TGG + Chr8:75959298-75959317 MsG0880046633.01.T01:CDS 35.0%
! TTGATTCGATGCTTAAGTTC+AGG - Chr8:75961389-75961408 None:intergenic 35.0%
! TTGTACTTGTTGATGTGTAC+GGG + Chr8:75958436-75958455 MsG0880046633.01.T01:intron 35.0%
! TTTTGTTGACCTGGCATTAT+TGG + Chr8:75960832-75960851 MsG0880046633.01.T01:intron 35.0%
!! AAACTTGATTTTGACATGGG+CGG - Chr8:75961818-75961837 None:intergenic 35.0%
!! ATCTTAAAGTGCTGTGGTAT+GGG - Chr8:75956907-75956926 None:intergenic 35.0%
!! GTAGATAATTCATGGATTGG+TGG + Chr8:75962482-75962501 MsG0880046633.01.T01:intron 35.0%
!! TACAGGAAATGTTGACTTTG+TGG + Chr8:75958554-75958573 MsG0880046633.01.T01:intron 35.0%
!! TCTTTGGTTCTGTTATCTGA+AGG + Chr8:75960097-75960116 MsG0880046633.01.T01:intron 35.0%
!! TTAGGTTCTGAGCAAATAGT+GGG - Chr8:75960894-75960913 None:intergenic 35.0%
!! TTTAGGTTCTGAGCAAATAG+TGG - Chr8:75960895-75960914 None:intergenic 35.0%
!!! AGTTGTTTTGAGCATATGGT+TGG + Chr8:75960982-75961001 MsG0880046633.01.T01:intron 35.0%
!!! CTTTTCAGGTTGCAATGATT+GGG + Chr8:75960459-75960478 MsG0880046633.01.T01:intron 35.0%
!!! CTTTTTTGTCTGCATTTGCT+TGG + Chr8:75959095-75959114 MsG0880046633.01.T01:intron 35.0%
!!! GCTTGCCACTTTATTTTTCA+TGG + Chr8:75956750-75956769 MsG0880046633.01.T01:intron 35.0%
!!! TCTTTTCAGGTTGCAATGAT+TGG + Chr8:75960458-75960477 MsG0880046633.01.T01:intron 35.0%
!!! TGCTTGGTGTTGCAATATTT+TGG + Chr8:75959111-75959130 MsG0880046633.01.T01:intron 35.0%
AAACTCTTATTGTCTGTCGG+TGG + Chr8:75956783-75956802 MsG0880046633.01.T01:intron 40.0%
AAATCTGAACTTGGAGTACG+GGG - Chr8:75956691-75956710 None:intergenic 40.0%
AGAACATCACTTCTAGTAGG+AGG - Chr8:75959982-75960001 None:intergenic 40.0%
AGAGAGAATGCAAGACAGAA+AGG - Chr8:75956546-75956565 None:intergenic 40.0%
AGATCACTCAGTTCATTCAG+AGG - Chr8:75960218-75960237 None:intergenic 40.0%
ATTCAGAGGAAGTAGTGTCA+AGG - Chr8:75960204-75960223 None:intergenic 40.0%
CAAAAGGGACATTTGCAGAA+TGG + Chr8:75962938-75962957 MsG0880046633.01.T01:intron 40.0%
CAAATCTGAACTTGGAGTAC+GGG - Chr8:75956692-75956711 None:intergenic 40.0%
CACAATAAAGTGCAGCAAGT+TGG - Chr8:75962329-75962348 None:intergenic 40.0%
CACTCATGATCTGGATAAAC+TGG + Chr8:75956985-75957004 MsG0880046633.01.T01:CDS 40.0%
CAGGAAAAGTAAAACCAGTG+GGG - Chr8:75962609-75962628 None:intergenic 40.0%
CATGATCTGGATAAACTGGA+GGG + Chr8:75956989-75957008 MsG0880046633.01.T01:CDS 40.0%
CGTTAGTGAATGACCAATCA+TGG + Chr8:75960027-75960046 MsG0880046633.01.T01:intron 40.0%
CTGAATGCATGTCCAAACAT+GGG - Chr8:75961739-75961758 None:intergenic 40.0%
GAACCAGTTGCATACTTGAA+TGG + Chr8:75960769-75960788 MsG0880046633.01.T01:intron 40.0%
GAGTGATCTTATCAGGAAAG+AGG + Chr8:75960229-75960248 MsG0880046633.01.T01:CDS 40.0%
GCAGACTGCAGATAAAATAC+AGG - Chr8:75960709-75960728 None:intergenic 40.0%
GGCGTAAAGTTAATGCTTGA+AGG - Chr8:75957300-75957319 None:intergenic 40.0%
GTCTATTGTCTAAAAGGCTC+AGG + Chr8:75958397-75958416 MsG0880046633.01.T01:intron 40.0%
GTTTCACCTGGCAATAAATC+AGG + Chr8:75962537-75962556 MsG0880046633.01.T01:CDS 40.0%
GTTTCCAATGATAACCGCTT+TGG - Chr8:75960561-75960580 None:intergenic 40.0%
TCAAACTCACAAGGCTATTC+TGG - Chr8:75956582-75956601 None:intergenic 40.0%
TCATCCATGTGATGTTATGG+AGG + Chr8:75960002-75960021 MsG0880046633.01.T01:CDS 40.0%
TCATGATCTGGATAAACTGG+AGG + Chr8:75956988-75957007 MsG0880046633.01.T01:CDS 40.0%
TGAATGCATGTCCAAACATG+GGG - Chr8:75961738-75961757 None:intergenic 40.0%
TGACAGCATTCAAACTCACA+AGG - Chr8:75956591-75956610 None:intergenic 40.0%
TGTCCATTCAAGTATGCAAC+TGG - Chr8:75960775-75960794 None:intergenic 40.0%
TTCTTAGGTAACAGCCTTTG+CGG + Chr8:75959157-75959176 MsG0880046633.01.T01:intron 40.0%
TTGAGTTCTACAAAGGAGCA+GGG - Chr8:75963112-75963131 None:intergenic 40.0%
TTGCTTGTCATTAGAGGACA+GGG + Chr8:75958353-75958372 MsG0880046633.01.T01:intron 40.0%
TTGTCTACCAGCAAGAAACT+CGG - Chr8:75962702-75962721 None:intergenic 40.0%
! AATAAAGTGCAGCAAGTTGG+CGG - Chr8:75962326-75962345 None:intergenic 40.0%
! ATTTTCCTCCCTCTGTTCTT+TGG + Chr8:75957513-75957532 MsG0880046633.01.T01:intron 40.0%
! CTTTATTGTGGTGCTAATGC+AGG + Chr8:75962339-75962358 MsG0880046633.01.T01:CDS 40.0%
! GCAACAGTTTTCAAAATGCC+AGG - Chr8:75961135-75961154 None:intergenic 40.0%
! TCAGAGCATCCTATTGCTAT+TGG + Chr8:75958298-75958317 MsG0880046633.01.T01:intron 40.0%
! TGTACTTGTTGATGTGTACG+GGG + Chr8:75958437-75958456 MsG0880046633.01.T01:intron 40.0%
! TGTGCACCATTGATAATTGG+GGG - Chr8:75958965-75958984 None:intergenic 40.0%
! TTTTACCTTTATGGGCTTGG+TGG - Chr8:75961169-75961188 None:intergenic 40.0%
!! ATAATGGACCCAATAATGCC+AGG - Chr8:75960844-75960863 None:intergenic 40.0%
!! CAACTTGCTGCACTTTATTG+TGG + Chr8:75962327-75962346 MsG0880046633.01.T01:CDS 40.0%
!! CATCTTAAAGTGCTGTGGTA+TGG - Chr8:75956908-75956927 None:intergenic 40.0%
!! CTGGATTTCAGATGGTTTTG+AGG + Chr8:75961518-75961537 MsG0880046633.01.T01:intron 40.0%
!! TGGATTGGTGGACAAAGTAA+TGG + Chr8:75962494-75962513 MsG0880046633.01.T01:CDS 40.0%
!! TTGGTCTTGCTTGTCATTAG+AGG + Chr8:75958347-75958366 MsG0880046633.01.T01:intron 40.0%
AAAGAAAGTGGTAAGCTGGC+TGG + Chr8:75961459-75961478 MsG0880046633.01.T01:intron 45.0%
AATCTGAACTTGGAGTACGG+GGG - Chr8:75956690-75956709 None:intergenic 45.0%
ACTGACTAGACATCCCTCTT+TGG + Chr8:75960081-75960100 MsG0880046633.01.T01:intron 45.0%
AGACACTAACTGTGCAAGCA+AGG - Chr8:75958599-75958618 None:intergenic 45.0%
AGAGATACAGTCTACTCCAC+AGG - Chr8:75962984-75963003 None:intergenic 45.0%
AGTATCATTGGAGGCTGAAG+AGG + Chr8:75959310-75959329 MsG0880046633.01.T01:CDS 45.0%
ATCCAGATCATGAGTGCCAA+TGG - Chr8:75956981-75957000 None:intergenic 45.0%
ATGAGTGCCAATGGCAACAA+GGG - Chr8:75956972-75956991 None:intergenic 45.0%
CAAGCAAGGCTTCACACTAA+AGG - Chr8:75958585-75958604 None:intergenic 45.0%
CATCAGTGTCTCTGCTTGAT+TGG + Chr8:75962422-75962441 MsG0880046633.01.T01:intron 45.0%
CGGTTATCATTGGAAACCCT+AGG + Chr8:75960564-75960583 MsG0880046633.01.T01:CDS 45.0%
CGTACCTCCATAACATCACA+TGG - Chr8:75960009-75960028 None:intergenic 45.0%
CTTGCTTGTCATTAGAGGAC+AGG + Chr8:75958352-75958371 MsG0880046633.01.T01:intron 45.0%
GAATGCATGTCCAAACATGG+GGG - Chr8:75961737-75961756 None:intergenic 45.0%
GCTGAATGCATGTCCAAACA+TGG - Chr8:75961740-75961759 None:intergenic 45.0%
GGTTATGCTCCCACATGTAT+TGG + Chr8:75960647-75960666 MsG0880046633.01.T01:intron 45.0%
GGTTGCAATGATTGGGTTCA+CGG + Chr8:75960466-75960485 MsG0880046633.01.T01:intron 45.0%
GTCATCTTTGCGGTTTAGCA+TGG - Chr8:75960534-75960553 None:intergenic 45.0%
GTTATGAACCTAGCACGAGT+AGG + Chr8:75957631-75957650 MsG0880046633.01.T01:intron 45.0%
GTTCTTTGTCTCCAGAGTGA+TGG - Chr8:75958993-75959012 None:intergenic 45.0%
GTTGAGTTCTACAAAGGAGC+AGG - Chr8:75963113-75963132 None:intergenic 45.0%
TCAGTGATCACAAGTACCTC+TGG - Chr8:75962776-75962795 None:intergenic 45.0%
TGTATGTGTTCCCCCATGTT+TGG + Chr8:75961724-75961743 MsG0880046633.01.T01:intron 45.0%
TGTCTACCAGCAAGAAACTC+GGG - Chr8:75962701-75962720 None:intergenic 45.0%
TTAGAAAGAGGTGGAAGACG+AGG - Chr8:75958645-75958664 None:intergenic 45.0%
TTTCGGCATTGTTCATCCAG+AGG + Chr8:75962757-75962776 MsG0880046633.01.T01:CDS 45.0%
! GGAAAGCAAGTTGGGACTTT+CGG + Chr8:75962740-75962759 MsG0880046633.01.T01:CDS 45.0%
! GGGATTACCTTTGTTTCACC+TGG + Chr8:75962525-75962544 MsG0880046633.01.T01:CDS 45.0%
! GTACTTGTTGATGTGTACGG+GGG + Chr8:75958438-75958457 MsG0880046633.01.T01:intron 45.0%
! TATTGTCTGTCGGTGGCTTT+TGG + Chr8:75956790-75956809 MsG0880046633.01.T01:intron 45.0%
! TGGTGCTAATGCAGGATTTG+AGG + Chr8:75962347-75962366 MsG0880046633.01.T01:CDS 45.0%
!!! CAGATGGTTTTGAGGTGTGA+TGG + Chr8:75961526-75961545 MsG0880046633.01.T01:intron 45.0%
!!! GCTCAGGGTACTCTGTTTTT+TGG + Chr8:75958413-75958432 MsG0880046633.01.T01:intron 45.0%
!! ATAAAAAAATAAAAAAATGA+CGG - Chr8:75959631-75959650 None:intergenic 5.0%
!!! TTTTTATTTATTTTTAGTTT+TGG + Chr8:75958328-75958347 MsG0880046633.01.T01:intron 5.0%
AACCACCACCAAGCCCATAA+AGG + Chr8:75961161-75961180 MsG0880046633.01.T01:CDS 50.0%
ACCTCGAAGTCTGAAGACCT+AGG - Chr8:75960584-75960603 None:intergenic 50.0%
ATGGCAGGAAAGGAGCTTCA+GGG + Chr8:75957537-75957556 MsG0880046633.01.T01:intron 50.0%
ATTACTACACAGGACCCCAC+TGG + Chr8:75962592-75962611 MsG0880046633.01.T01:intron 50.0%
CACCGCTACTGATCTGACAA+AGG + Chr8:75959027-75959046 MsG0880046633.01.T01:CDS 50.0%
CATGAGTGCCAATGGCAACA+AGG - Chr8:75956973-75956992 None:intergenic 50.0%
CCTCGAAGTCTGAAGACCTA+GGG - Chr8:75960583-75960602 None:intergenic 50.0%
CGAAGAACCCTTGTTGCCAT+TGG + Chr8:75956962-75956981 MsG0880046633.01.T01:CDS 50.0%
CGCCTTTGTCAGATCAGTAG+CGG - Chr8:75959032-75959051 None:intergenic 50.0%
CTCATAAGCCTACTCGTGCT+AGG - Chr8:75957642-75957661 None:intergenic 50.0%
CTGCCATGCCAAAGAACAGA+GGG - Chr8:75957524-75957543 None:intergenic 50.0%
GTCATTAGAGGACAGGGCAT+TGG + Chr8:75958359-75958378 MsG0880046633.01.T01:intron 50.0%
GTTCTTTGGCATGGCAGGAA+AGG + Chr8:75957527-75957546 MsG0880046633.01.T01:intron 50.0%
TCATTCAAGTCCGCCCAACA+AGG + Chr8:75957662-75957681 MsG0880046633.01.T01:intron 50.0%
TCTACAAAGGAGCAGGGATC+AGG - Chr8:75963106-75963125 None:intergenic 50.0%
TGCAATGATTGGGTTCACGG+AGG + Chr8:75960469-75960488 MsG0880046633.01.T01:CDS 50.0%
TGCCATTGGCACTCATGATC+TGG + Chr8:75956976-75956995 MsG0880046633.01.T01:CDS 50.0%
!! GTTCGGACTAGTCTTATGCC+TGG + Chr8:75961114-75961133 MsG0880046633.01.T01:CDS 50.0%
!! TACCTTTATGGGCTTGGTGG+TGG - Chr8:75961166-75961185 None:intergenic 50.0%
!!! GGTTTTGAGGTGTGATGGTC+TGG + Chr8:75961531-75961550 MsG0880046633.01.T01:intron 50.0%
AAGGAGCCCGAGTTTCTTGC+TGG + Chr8:75962692-75962711 MsG0880046633.01.T01:intron 55.0%
ACATGGGCGGTTCGAGAACA+GGG - Chr8:75961805-75961824 None:intergenic 55.0%
CATGGCAGGAAAGGAGCTTC+AGG + Chr8:75957536-75957555 MsG0880046633.01.T01:intron 55.0%
CCATGCCAAAGAACAGAGGG+AGG - Chr8:75957521-75957540 None:intergenic 55.0%
CCCTAGGTCTTCAGACTTCG+AGG + Chr8:75960580-75960599 MsG0880046633.01.T01:CDS 55.0%
CCTCCCTCTGTTCTTTGGCA+TGG + Chr8:75957518-75957537 MsG0880046633.01.T01:intron 55.0%
CCTCTGTTCTTTGGCATGGC+AGG + Chr8:75957522-75957541 MsG0880046633.01.T01:intron 55.0%
CCTGCCATGCCAAAGAACAG+AGG - Chr8:75957525-75957544 None:intergenic 55.0%
CTTCAGGGCTGATGAGCTCA+TGG + Chr8:75957552-75957571 MsG0880046633.01.T01:CDS 55.0%
GCTTGGCGTGCAATTGCATC+CGG - Chr8:75959915-75959934 None:intergenic 55.0%
TGCACATTCGGCCATCACTC+TGG + Chr8:75958979-75958998 MsG0880046633.01.T01:CDS 55.0%
! GGAGGGTCCTTTTACCTACG+AGG + Chr8:75957006-75957025 MsG0880046633.01.T01:CDS 55.0%
GACATGGGCGGTTCGAGAAC+AGG - Chr8:75961806-75961825 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 75956298 75963150 75956298 ID=MsG0880046633.01;Name=MsG0880046633.01
Chr8 mRNA 75956298 75963150 75956298 ID=MsG0880046633.01.T01;Parent=MsG0880046633.01;Name=MsG0880046633.01.T01;_AED=0.49;_eAED=0.62;_QI=0|0.78|0.73|1|0.57|0.53|15|0|565
Chr8 exon 75956298 75956379 75956298 ID=MsG0880046633.01.T01:exon:32372;Parent=MsG0880046633.01.T01
Chr8 exon 75956925 75957115 75956925 ID=MsG0880046633.01.T01:exon:32373;Parent=MsG0880046633.01.T01
Chr8 exon 75957288 75957329 75957288 ID=MsG0880046633.01.T01:exon:32374;Parent=MsG0880046633.01.T01
Chr8 exon 75957544 75957585 75957544 ID=MsG0880046633.01.T01:exon:32375;Parent=MsG0880046633.01.T01
Chr8 exon 75957764 75957840 75957764 ID=MsG0880046633.01.T01:exon:32376;Parent=MsG0880046633.01.T01
Chr8 exon 75958946 75959072 75958946 ID=MsG0880046633.01.T01:exon:32377;Parent=MsG0880046633.01.T01
Chr8 exon 75959164 75959331 75959164 ID=MsG0880046633.01.T01:exon:32378;Parent=MsG0880046633.01.T01
Chr8 exon 75959895 75960023 75959895 ID=MsG0880046633.01.T01:exon:32379;Parent=MsG0880046633.01.T01
Chr8 exon 75960119 75960250 75960119 ID=MsG0880046633.01.T01:exon:32380;Parent=MsG0880046633.01.T01
Chr8 exon 75960467 75960601 75960467 ID=MsG0880046633.01.T01:exon:32381;Parent=MsG0880046633.01.T01
Chr8 exon 75961111 75961182 75961111 ID=MsG0880046633.01.T01:exon:32382;Parent=MsG0880046633.01.T01
Chr8 exon 75962264 75962368 75962264 ID=MsG0880046633.01.T01:exon:32383;Parent=MsG0880046633.01.T01
Chr8 exon 75962486 75962581 75962486 ID=MsG0880046633.01.T01:exon:32384;Parent=MsG0880046633.01.T01
Chr8 exon 75962695 75962799 75962695 ID=MsG0880046633.01.T01:exon:32385;Parent=MsG0880046633.01.T01
Chr8 exon 75962956 75963150 75962956 ID=MsG0880046633.01.T01:exon:32386;Parent=MsG0880046633.01.T01
Chr8 CDS 75956298 75956379 75956298 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75956925 75957115 75956925 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75957288 75957329 75957288 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75957544 75957585 75957544 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75957764 75957840 75957764 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75958946 75959072 75958946 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75959164 75959331 75959164 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75959895 75960023 75959895 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75960119 75960250 75960119 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75960467 75960601 75960467 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75961111 75961182 75961111 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75962264 75962368 75962264 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75962486 75962581 75962486 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75962695 75962799 75962695 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Chr8 CDS 75962956 75963150 75962956 ID=MsG0880046633.01.T01:cds;Parent=MsG0880046633.01.T01
Gene Sequence

>MsG0880046633.01.T01

ATGATGCACATGCTCTTATCTATTTACTTAGATATTCTAGAGTTATCTTTTGTCAGCTATACTGCTGTATCAGACTTCTATTATGAATTTCGATTAATTTCTTTTCAATCTTTTTCAGGCGAAGAACCCTTGTTGCCATTGGCACTCATGATCTGGATAAACTGGAGGGTCCTTTTACCTACGAGGTTTATTTCTTTCAAACTCCAGAGCATGAAAGTTAAATGCATTGTGGATAAAAAATTCATCAAATTTAAGATTTTGAGAGACAATAATGCTTTACCACCTTCAAGCATTAACTTTACGCCACTAAAACAGGAAAGGAGCTTCAGGGCTGATGAGCTCATGGAGTTCTACAAATCAGATTTGAAACTGAAGAAATTCTTGCATATAATTGAGGACTCTCCCGTTTATCCTGTTATATATGATAGTAAGAGAACTGTTTTATCTTTACCCCCAATTATCAATGGTGCACATTCGGCCATCACTCTGGAGACAAAGAACGTATTTATTGAATGCACCGCTACTGATCTGACAAAGGCGAAGATTGTTTTAAATACAATGGTAACAGCCTTTGCGGAATATTGTGAAAATAAGTTTGTCATTGAACCAGTTGAAGTGATTTCTTCTGATGGAAAATCTCACATATACCCTGATTTATCTGTCTACAATATGGAAGTTTCTCTATCTTACATTACTGGATTGATTGGAGTATCATTGGAGGCTGAAGAGGTTATCAAGTTCTTAAACCGGATGCAATTGCACGCCAAGCAATCTACATCTGACAATAAACAGTGCAACTTTATTGTATCTGTACCTCCTACTAGAAGTGATGTTCTTCATCCATGTGATGTTATGGAGGATGTTGCAATAGCTTATGGATTCAATGCTATCAAGGATCAAGCAATAGTCGATAATAAGGGTTCAAAGAGATTAGCTGCTTCCTTGACACTACTTCCTCTGAATGAACTGAGTGATCTTATCAGGAAAGAGGTTGCAATGATTGGGTTCACGGAGGTTTTGACTTTTATACTCTGCTCTAAAAAAGAAAACTTTTCCATGCTAAACCGCAAAGATGACAAATCCAAAGCGGTTATCATTGGAAACCCTAGGTCTTCAGACTTCGAGGCTGTTCGGACTAGTCTTATGCCTGGCATTTTGAAAACTGTTGCTCACACAACCACCACCAAGCCCATAAAGATTTTTGAAGTGGGTGATATAGCTATTTTGGATGACAATGATGTTGGTGCAAAAAATCTCCGCCAACTTGCTGCACTTTATTGTGGTGCTAATGCAGGATTTGAGATAATTCATGGATTGGTGGACAAAGTAATGGAAAAGAATGGGATTACCTTTGTTTCACCTGGCAATAAATCAGGGTATTATATTGAGCGGTCAGATGAGCCCGAGTTTCTTGCTGGTAGACAAGCCAGAATTATTTACAAGGGAAAGCAAGTTGGGACTTTCGGCATTGTTCATCCAGAGGTACTTGTGATCACTGAAATTAATGGAGTCTTAAGTATGCAATTTTCCTGTGGAGTAGACTGTATCTCTCTTGCAATAAATGTCTCTATATGTACTTGGAGTCATACATCTAAAACAAATTATTATTATTCTTGTGTATTCTTTCAGGTATTAAACAGCTTCGACATTCCTGATCCCTGCTCCTTTGTAGAACTCAACATTGAAAGTTTCTTGTAA
Protein sequence

>MsG0880046633.01.T01

MMHMLLSIYLDILELSFVSYTAVSDFYYEFRLISFQSFSGEEPLLPLALMIWINWRVLLPTRFISFKLQSMKVKCIVDKKFIKFKILRDNNALPPSSINFTPLKQERSFRADELMEFYKSDLKLKKFLHIIEDSPVYPVIYDSKRTVLSLPPIINGAHSAITLETKNVFIECTATDLTKAKIVLNTMVTAFAEYCENKFVIEPVEVISSDGKSHIYPDLSVYNMEVSLSYITGLIGVSLEAEEVIKFLNRMQLHAKQSTSDNKQCNFIVSVPPTRSDVLHPCDVMEDVAIAYGFNAIKDQAIVDNKGSKRLAASLTLLPLNELSDLIRKEVAMIGFTEVLTFILCSKKENFSMLNRKDDKSKAVIIGNPRSSDFEAVRTSLMPGILKTVAHTTTTKPIKIFEVGDIAILDDNDVGAKNLRQLAALYCGANAGFEIIHGLVDKVMEKNGITFVSPGNKSGYYIERSDEPEFLAGRQARIIYKGKQVGTFGIVHPEVLVITEINGVLSMQFSCGVDCISLAINVSICTWSHTSKTNYYYSCVFFQVLNSFDIPDPCSFVELNIESFL*