Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046781.01.T01 | XP_003609343.2 | 94.728 | 626 | 33 | 0 | 4 | 629 | 8 | 633 | 0 | 1147 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046781.01.T01 | Q9SKK0 | 51.482 | 641 | 282 | 7 | 1 | 629 | 5 | 628 | 0 | 643 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046781.01.T01 | G7JE32 | 94.728 | 626 | 33 | 0 | 4 | 629 | 8 | 633 | 0.0 | 1147 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004058.01 | MsG0880046781.01 | 0.811421 | 7.059721e-51 | 4.368119e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180003335.01 | MsG0880046781.01 | PPI |
| MsG0880046781.01 | MsG0680030840.01 | PPI |
| MsG0880046781.01 | MsG0180004542.01 | PPI |
| MsG0880046781.01 | MsG0180005325.01 | PPI |
| MsG0880046781.01 | MsG0580027927.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046781.01.T01 | MTR_4g114640 | 94.728 | 626 | 33 | 0 | 4 | 629 | 8 | 633 | 0.0 | 1147 |
| MsG0880046781.01.T01 | MTR_4g114650 | 79.022 | 634 | 91 | 5 | 1 | 628 | 1 | 598 | 0.0 | 945 |
| MsG0880046781.01.T01 | MTR_4g114650 | 79.081 | 631 | 90 | 5 | 4 | 628 | 59 | 653 | 0.0 | 941 |
| MsG0880046781.01.T01 | MTR_4g114650 | 79.081 | 631 | 90 | 5 | 4 | 628 | 8 | 602 | 0.0 | 941 |
| MsG0880046781.01.T01 | MTR_1g012520 | 60.031 | 643 | 235 | 6 | 3 | 629 | 7 | 643 | 0.0 | 738 |
| MsG0880046781.01.T01 | MTR_3g107280 | 53.354 | 641 | 281 | 5 | 1 | 628 | 5 | 640 | 0.0 | 641 |
| MsG0880046781.01.T01 | MTR_2g021030 | 25.990 | 581 | 367 | 16 | 60 | 593 | 11 | 575 | 1.37e-39 | 154 |
| MsG0880046781.01.T01 | MTR_2g021030 | 26.407 | 462 | 300 | 10 | 163 | 621 | 153 | 577 | 5.43e-35 | 140 |
| MsG0880046781.01.T01 | MTR_2g021030 | 27.873 | 409 | 283 | 11 | 215 | 621 | 127 | 525 | 8.90e-25 | 109 |
| MsG0880046781.01.T01 | MTR_2g021030 | 29.856 | 278 | 160 | 5 | 140 | 414 | 340 | 585 | 1.04e-23 | 106 |
| MsG0880046781.01.T01 | MTR_2g021030 | 28.435 | 313 | 210 | 6 | 163 | 470 | 281 | 584 | 9.35e-22 | 100 |
| MsG0880046781.01.T01 | MTR_7g112570 | 29.138 | 429 | 270 | 10 | 150 | 566 | 184 | 590 | 4.76e-30 | 125 |
| MsG0880046781.01.T01 | MTR_7g112570 | 26.496 | 468 | 274 | 14 | 178 | 616 | 135 | 561 | 1.92e-21 | 99.0 |
| MsG0880046781.01.T01 | MTR_7g112570 | 33.333 | 123 | 81 | 1 | 163 | 285 | 478 | 599 | 2.61e-11 | 67.0 |
| MsG0880046781.01.T01 | MTR_7g112570 | 28.764 | 445 | 282 | 11 | 150 | 582 | 184 | 605 | 7.10e-30 | 125 |
| MsG0880046781.01.T01 | MTR_7g112570 | 26.496 | 468 | 274 | 14 | 178 | 616 | 135 | 561 | 2.94e-21 | 99.0 |
| MsG0880046781.01.T01 | MTR_7g112570 | 26.263 | 297 | 186 | 6 | 161 | 456 | 399 | 663 | 4.65e-19 | 92.0 |
| MsG0880046781.01.T01 | MTR_7g112570 | 29.138 | 429 | 270 | 10 | 150 | 566 | 184 | 590 | 7.69e-30 | 125 |
| MsG0880046781.01.T01 | MTR_7g112570 | 26.496 | 468 | 274 | 14 | 178 | 616 | 135 | 561 | 2.26e-21 | 99.0 |
| MsG0880046781.01.T01 | MTR_7g112570 | 29.502 | 261 | 174 | 6 | 163 | 418 | 350 | 605 | 3.48e-18 | 89.0 |
| MsG0880046781.01.T01 | MTR_2g021030 | 25.806 | 434 | 268 | 11 | 60 | 449 | 11 | 434 | 7.90e-28 | 117 |
| MsG0880046781.01.T01 | MTR_2g021030 | 27.697 | 343 | 211 | 9 | 215 | 555 | 127 | 434 | 8.92e-21 | 96.3 |
| MsG0880046781.01.T01 | MTR_2g021030 | 25.879 | 313 | 198 | 9 | 325 | 610 | 132 | 437 | 1.81e-15 | 79.7 |
| MsG0880046781.01.T01 | MTR_2g021030 | 28.095 | 210 | 98 | 1 | 163 | 372 | 281 | 437 | 2.35e-14 | 76.3 |
| MsG0880046781.01.T01 | MTR_4g013255 | 27.021 | 470 | 299 | 16 | 125 | 579 | 132 | 572 | 1.21e-25 | 112 |
| MsG0880046781.01.T01 | MTR_4g013255 | 26.250 | 480 | 316 | 15 | 163 | 615 | 88 | 556 | 1.64e-24 | 108 |
| MsG0880046781.01.T01 | MTR_4g013255 | 29.204 | 339 | 203 | 10 | 162 | 499 | 319 | 621 | 2.59e-21 | 99.0 |
| MsG0880046781.01.T01 | MTR_1g114610 | 24.706 | 425 | 277 | 11 | 58 | 474 | 18 | 407 | 1.27e-25 | 110 |
| MsG0880046781.01.T01 | MTR_1g114610 | 25.587 | 426 | 280 | 11 | 91 | 504 | 10 | 410 | 1.45e-17 | 85.9 |
| MsG0880046781.01.T01 | MTR_1g114610 | 23.794 | 311 | 181 | 6 | 328 | 610 | 103 | 385 | 5.40e-16 | 80.9 |
| MsG0880046781.01.T01 | MTR_1g114610 | 31.122 | 196 | 131 | 4 | 424 | 618 | 94 | 286 | 7.88e-16 | 80.5 |
| MsG0880046781.01.T01 | MTR_8g028140 | 27.174 | 368 | 223 | 10 | 56 | 399 | 18 | 364 | 9.29e-20 | 92.4 |
| MsG0880046781.01.T01 | MTR_3g088895 | 31.183 | 186 | 102 | 2 | 197 | 382 | 123 | 282 | 8.10e-18 | 85.9 |
| MsG0880046781.01.T01 | MTR_3g088895 | 32.877 | 146 | 71 | 3 | 130 | 251 | 140 | 282 | 8.80e-11 | 64.3 |
| MsG0880046781.01.T01 | MTR_8g028140 | 29.044 | 272 | 154 | 7 | 148 | 399 | 32 | 284 | 1.75e-16 | 81.3 |
| MsG0880046781.01.T01 | MTR_8g028140 | 26.587 | 252 | 153 | 5 | 178 | 403 | 17 | 262 | 7.62e-11 | 64.3 |
| MsG0880046781.01.T01 | MTR_1g015450 | 24.883 | 426 | 245 | 15 | 175 | 579 | 339 | 710 | 1.08e-15 | 81.6 |
| MsG0880046781.01.T01 | MTR_1g054625 | 30.204 | 245 | 153 | 5 | 161 | 395 | 90 | 326 | 1.53e-15 | 79.0 |
| MsG0880046781.01.T01 | MTR_1g054625 | 21.321 | 333 | 198 | 8 | 176 | 502 | 52 | 326 | 2.02e-14 | 75.5 |
| MsG0880046781.01.T01 | MTR_1g054625 | 29.918 | 244 | 160 | 8 | 331 | 573 | 107 | 340 | 2.53e-14 | 75.1 |
| MsG0880046781.01.T01 | MTR_1g054625 | 30.667 | 225 | 142 | 4 | 177 | 395 | 13 | 229 | 5.16e-15 | 75.9 |
| MsG0880046781.01.T01 | MTR_1g054625 | 25.281 | 178 | 129 | 2 | 325 | 502 | 56 | 229 | 1.76e-12 | 68.2 |
| MsG0880046781.01.T01 | MTR_1g054625 | 25.092 | 271 | 170 | 6 | 335 | 604 | 14 | 252 | 7.65e-11 | 63.5 |
| MsG0880046781.01.T01 | MTR_4g019320 | 21.886 | 562 | 369 | 19 | 60 | 593 | 8 | 527 | 4.83e-14 | 75.5 |
| MsG0880046781.01.T01 | MTR_1g018790 | 24.444 | 360 | 207 | 10 | 211 | 566 | 134 | 432 | 1.83e-13 | 73.9 |
| MsG0880046781.01.T01 | MTR_1g018790 | 37.190 | 121 | 72 | 3 | 164 | 282 | 320 | 438 | 6.23e-11 | 65.9 |
| MsG0880046781.01.T01 | MTR_1g029500 | 33.333 | 153 | 95 | 3 | 130 | 281 | 127 | 273 | 2.19e-13 | 72.4 |
| MsG0880046781.01.T01 | MTR_1g029500 | 28.505 | 214 | 141 | 3 | 160 | 361 | 99 | 312 | 9.25e-13 | 70.5 |
| MsG0880046781.01.T01 | MTR_4g125410 | 25.194 | 258 | 185 | 6 | 332 | 586 | 161 | 413 | 2.22e-13 | 73.2 |
| MsG0880046781.01.T01 | MTR_4g125440 | 26.744 | 258 | 181 | 7 | 332 | 586 | 397 | 649 | 2.59e-13 | 73.6 |
| MsG0880046781.01.T01 | MTR_1g015480 | 23.349 | 424 | 254 | 15 | 175 | 579 | 157 | 528 | 4.23e-12 | 69.7 |
| MsG0880046781.01.T01 | MTR_8g037780 | 23.617 | 470 | 296 | 17 | 167 | 604 | 131 | 569 | 4.56e-12 | 69.3 |
| MsG0880046781.01.T01 | MTR_8g017160 | 23.649 | 444 | 307 | 15 | 167 | 593 | 136 | 564 | 5.02e-12 | 69.3 |
| MsG0880046781.01.T01 | MTR_4g036815 | 25.532 | 329 | 208 | 13 | 215 | 541 | 189 | 482 | 1.33e-11 | 67.8 |
| MsG0880046781.01.T01 | MTR_4g133640 | 22.477 | 436 | 289 | 13 | 167 | 563 | 135 | 560 | 2.03e-11 | 67.4 |
| MsG0880046781.01.T01 | MTR_5g081870 | 25.000 | 392 | 221 | 18 | 162 | 514 | 145 | 502 | 2.35e-11 | 67.0 |
| MsG0880046781.01.T01 | MTR_5g095830 | 23.640 | 478 | 316 | 14 | 168 | 621 | 98 | 550 | 2.39e-11 | 67.4 |
| MsG0880046781.01.T01 | MTR_3g408430 | 22.807 | 513 | 289 | 20 | 19 | 511 | 11 | 436 | 3.29e-11 | 66.2 |
| MsG0880046781.01.T01 | MTR_2g041610 | 24.324 | 259 | 164 | 5 | 356 | 586 | 400 | 654 | 3.40e-11 | 66.6 |
| MsG0880046781.01.T01 | MTR_7g083610 | 28.780 | 205 | 121 | 9 | 183 | 370 | 315 | 511 | 5.39e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046781.01.T01 | AT2G25490 | 51.482 | 641 | 282 | 7 | 1 | 629 | 5 | 628 | 0.0 | 643 |
| MsG0880046781.01.T01 | AT5G25350 | 52.615 | 631 | 279 | 7 | 3 | 628 | 7 | 622 | 0.0 | 608 |
| MsG0880046781.01.T01 | AT4G15475 | 28.328 | 586 | 347 | 19 | 60 | 593 | 11 | 575 | 3.48e-43 | 164 |
| MsG0880046781.01.T01 | AT4G15475 | 27.378 | 347 | 214 | 6 | 125 | 470 | 275 | 584 | 1.28e-27 | 118 |
| MsG0880046781.01.T01 | AT4G15475 | 26.957 | 345 | 220 | 6 | 163 | 507 | 281 | 593 | 3.21e-23 | 104 |
| MsG0880046781.01.T01 | AT4G15475 | 24.118 | 340 | 223 | 9 | 305 | 615 | 109 | 442 | 3.47e-16 | 82.8 |
| MsG0880046781.01.T01 | AT4G15475 | 30.769 | 156 | 103 | 3 | 139 | 294 | 443 | 593 | 6.08e-12 | 68.9 |
| MsG0880046781.01.T01 | AT5G27920 | 25.615 | 488 | 302 | 11 | 147 | 582 | 90 | 568 | 1.08e-27 | 119 |
| MsG0880046781.01.T01 | AT5G23340 | 24.941 | 421 | 280 | 8 | 58 | 474 | 8 | 396 | 6.14e-24 | 105 |
| MsG0880046781.01.T01 | AT5G23340 | 26.804 | 291 | 203 | 6 | 292 | 576 | 85 | 371 | 2.82e-21 | 97.1 |
| MsG0880046781.01.T01 | AT5G23340 | 31.658 | 199 | 132 | 4 | 424 | 621 | 84 | 279 | 9.87e-19 | 89.4 |
| MsG0880046781.01.T01 | AT5G01720 | 26.200 | 500 | 298 | 17 | 163 | 606 | 85 | 569 | 2.14e-22 | 102 |
| MsG0880046781.01.T01 | AT5G01720 | 23.604 | 394 | 236 | 5 | 162 | 532 | 238 | 589 | 3.40e-20 | 95.5 |
| MsG0880046781.01.T01 | AT5G01720 | 29.412 | 170 | 89 | 2 | 188 | 332 | 443 | 606 | 4.17e-11 | 66.6 |
| MsG0880046781.01.T01 | AT5G01720 | 20.924 | 368 | 236 | 9 | 158 | 501 | 260 | 596 | 5.49e-11 | 66.2 |
| MsG0880046781.01.T01 | AT1G21410 | 28.351 | 194 | 113 | 2 | 189 | 382 | 104 | 271 | 7.03e-17 | 83.2 |
| MsG0880046781.01.T01 | AT1G21410 | 27.004 | 237 | 110 | 5 | 163 | 372 | 130 | 330 | 7.34e-14 | 73.9 |
| MsG0880046781.01.T01 | AT1G21410 | 28.351 | 194 | 113 | 2 | 189 | 382 | 104 | 271 | 7.03e-17 | 83.2 |
| MsG0880046781.01.T01 | AT1G21410 | 27.004 | 237 | 110 | 5 | 163 | 372 | 130 | 330 | 7.34e-14 | 73.9 |
| MsG0880046781.01.T01 | AT1G80630 | 22.222 | 414 | 274 | 10 | 177 | 555 | 108 | 508 | 7.51e-16 | 81.6 |
| MsG0880046781.01.T01 | AT3G58530 | 27.132 | 258 | 154 | 7 | 141 | 395 | 102 | 328 | 2.23e-15 | 78.6 |
| MsG0880046781.01.T01 | AT3G58530 | 21.557 | 334 | 197 | 7 | 176 | 502 | 53 | 328 | 1.13e-13 | 73.2 |
| MsG0880046781.01.T01 | AT3G58530 | 26.749 | 243 | 151 | 7 | 386 | 604 | 112 | 351 | 4.82e-12 | 68.2 |
| MsG0880046781.01.T01 | AT1G47056 | 26.239 | 343 | 190 | 12 | 188 | 502 | 116 | 423 | 2.99e-15 | 79.3 |
| MsG0880046781.01.T01 | AT1G47056 | 33.918 | 171 | 102 | 5 | 120 | 288 | 260 | 421 | 1.46e-13 | 73.9 |
| MsG0880046781.01.T01 | AT1G77000 | 28.947 | 228 | 143 | 5 | 163 | 372 | 104 | 330 | 2.64e-14 | 75.5 |
| MsG0880046781.01.T01 | AT1G77000 | 28.877 | 187 | 121 | 6 | 447 | 624 | 99 | 282 | 4.55e-11 | 65.5 |
| MsG0880046781.01.T01 | AT1G77000 | 28.947 | 228 | 143 | 5 | 163 | 372 | 104 | 330 | 2.64e-14 | 75.5 |
| MsG0880046781.01.T01 | AT1G77000 | 28.877 | 187 | 121 | 6 | 447 | 624 | 99 | 282 | 4.55e-11 | 65.5 |
| MsG0880046781.01.T01 | AT3G07550 | 23.098 | 368 | 239 | 8 | 48 | 404 | 6 | 340 | 2.71e-13 | 72.4 |
| MsG0880046781.01.T01 | AT3G07550 | 23.098 | 368 | 239 | 8 | 48 | 404 | 6 | 340 | 2.71e-13 | 72.4 |
| MsG0880046781.01.T01 | AT3G07550 | 24.167 | 360 | 218 | 8 | 48 | 404 | 6 | 313 | 5.77e-13 | 71.2 |
| MsG0880046781.01.T01 | AT4G30640 | 29.808 | 208 | 127 | 5 | 47 | 252 | 10 | 200 | 2.42e-12 | 68.6 |
| MsG0880046781.01.T01 | AT1G77000 | 28.324 | 173 | 98 | 2 | 189 | 361 | 104 | 250 | 1.54e-11 | 65.5 |
| MsG0880046781.01.T01 | AT1G77000 | 28.324 | 173 | 98 | 2 | 189 | 361 | 104 | 250 | 1.54e-11 | 65.5 |
| MsG0880046781.01.T01 | AT5G67250 | 23.913 | 368 | 196 | 10 | 212 | 566 | 117 | 413 | 3.91e-11 | 66.2 |
| MsG0880046781.01.T01 | AT4G07400 | 37.008 | 127 | 76 | 3 | 164 | 288 | 330 | 454 | 7.59e-11 | 65.5 |
Find 151 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGCATGATTCAATGTTTA+AGG | 0.094544 | 8:-78037356 | None:intergenic |
| CGCTGGCCTTCTCCCTCTTT+TGG | 0.142205 | 8:+78038101 | MsG0880046781.01.T01:CDS |
| AGTTTCTCGTGGAGAATTTA+TGG | 0.177171 | 8:+78038508 | MsG0880046781.01.T01:CDS |
| CTGGCTGTTATTGGCCATTA+TGG | 0.192129 | 8:+78037550 | MsG0880046781.01.T01:CDS |
| ATGTTTAAGGTTGTCAAGTT+AGG | 0.283107 | 8:-78037343 | None:intergenic |
| TGTGTCTTGTTTGCTATATT+CGG | 0.319855 | 8:+78037474 | MsG0880046781.01.T01:CDS |
| TCGTTACTGCCTTTCCATAA+TGG | 0.327153 | 8:-78037564 | None:intergenic |
| GAATATTACTGATGCAAGTT+TGG | 0.327338 | 8:+78038251 | MsG0880046781.01.T01:CDS |
| TTTATGGAGATGTGATATTC+TGG | 0.332414 | 8:+78038524 | MsG0880046781.01.T01:CDS |
| CTGGAGAGATCTTGTGCATT+TGG | 0.332649 | 8:-78037803 | None:intergenic |
| CTCTCTATGTCTGACTGTTC+AGG | 0.334066 | 8:+78038387 | MsG0880046781.01.T01:CDS |
| AACTTGCATCAGTAATATTC+TGG | 0.336340 | 8:-78038248 | None:intergenic |
| TGTCCTCTTGTTGGAGATCA+TGG | 0.346783 | 8:+78037451 | MsG0880046781.01.T01:CDS |
| ATTCAAAACTGTCCTGGTTT+CGG | 0.358584 | 8:+78037997 | MsG0880046781.01.T01:CDS |
| CTTGTCAAGGTGAACCTTGC+AGG | 0.363717 | 8:+78038141 | MsG0880046781.01.T01:CDS |
| AGGTGAACCTTGCAGGTTGC+TGG | 0.365852 | 8:+78038148 | MsG0880046781.01.T01:CDS |
| GTGCCTTTCCTGGTGAAATT+AGG | 0.368798 | 8:+78038426 | MsG0880046781.01.T01:CDS |
| TGCGAAGGCACATCTGCTTC+AGG | 0.374917 | 8:-78037741 | None:intergenic |
| ATTTACACTTGTGAAGTGTA+TGG | 0.378579 | 8:+78037909 | MsG0880046781.01.T01:CDS |
| ATCAGTGCCTCATTTACCTT+TGG | 0.379132 | 8:+78036761 | MsG0880046781.01.T01:CDS |
| GGCTTGCTGCTATTGCTGTT+GGG | 0.383869 | 8:+78037065 | MsG0880046781.01.T01:CDS |
| GAAATTAGGCCAGGCGTTGT+CGG | 0.389515 | 8:+78038440 | MsG0880046781.01.T01:CDS |
| GCTGCTATTGCTGTTGGGAC+TGG | 0.389778 | 8:+78037070 | MsG0880046781.01.T01:CDS |
| CTGTGGAATGTGTCTTCTAT+TGG | 0.391657 | 8:+78037208 | MsG0880046781.01.T01:CDS |
| TATTGCAATCAAACCCTTGT+TGG | 0.403057 | 8:-78037308 | None:intergenic |
| TGTGTCTTCTATTGGTGATA+AGG | 0.403727 | 8:+78037216 | MsG0880046781.01.T01:CDS |
| ACTGGTTGCCGTGGTGGACT+TGG | 0.405676 | 8:+78037088 | MsG0880046781.01.T01:CDS |
| GTGTCTTCTATTGGTGATAA+GGG | 0.408571 | 8:+78037217 | MsG0880046781.01.T01:CDS |
| GAACAAGTGTGTGCCTTTCC+TGG | 0.410656 | 8:+78038416 | MsG0880046781.01.T01:CDS |
| ATTGAATCATGCTCGATGAT+TGG | 0.411828 | 8:+78037364 | MsG0880046781.01.T01:CDS |
| CAGATCAACATGCTGAAGTT+GGG | 0.413419 | 8:-78038055 | None:intergenic |
| TCCCTTCCAAACGCCTTGTA+AGG | 0.414436 | 8:-78037024 | None:intergenic |
| AGGCTTGCTGCTATTGCTGT+TGG | 0.416928 | 8:+78037064 | MsG0880046781.01.T01:CDS |
| CTTGGAAAGCTATCTATTAG+AGG | 0.419353 | 8:+78037106 | MsG0880046781.01.T01:CDS |
| TGGCTACCTTACAAGGCGTT+TGG | 0.422778 | 8:+78037018 | MsG0880046781.01.T01:CDS |
| GAGCTTCTCTCTTTGCCACT+TGG | 0.430900 | 8:-78036878 | None:intergenic |
| TCCATGTTGGCCAGGCTACA+TGG | 0.434359 | 8:+78038192 | MsG0880046781.01.T01:CDS |
| TGTTTAAGGTTGTCAAGTTA+GGG | 0.434609 | 8:-78037342 | None:intergenic |
| ATCAAGGATTGTCCTCTTGT+TGG | 0.435290 | 8:+78037442 | MsG0880046781.01.T01:CDS |
| GGTAATGATGAATTGCATCC+TGG | 0.437251 | 8:+78036674 | MsG0880046781.01.T01:CDS |
| GTTGATCTGACTGGACTTTG+CGG | 0.440114 | 8:+78038069 | MsG0880046781.01.T01:CDS |
| TGTTGGTGATCGACGAAGAA+TGG | 0.444320 | 8:-78037291 | None:intergenic |
| AAATTAGGCCAGGCGTTGTC+GGG | 0.445281 | 8:+78038441 | MsG0880046781.01.T01:CDS |
| TGGAAAGGCAGTAACGAATC+TGG | 0.449057 | 8:+78037570 | MsG0880046781.01.T01:CDS |
| GCCTACCATTGAGATCCTTC+CGG | 0.449888 | 8:+78036823 | MsG0880046781.01.T01:CDS |
| GTTACATTCAATCTGTATCA+AGG | 0.456342 | 8:+78037426 | MsG0880046781.01.T01:CDS |
| AAGCTTTACCTTTGACAAGT+TGG | 0.456600 | 8:-78037500 | None:intergenic |
| TATTCAAGCCCGACAACGCC+TGG | 0.460376 | 8:-78038449 | None:intergenic |
| AGTGGCAAAGAGAGAAGCTC+AGG | 0.464804 | 8:+78036881 | MsG0880046781.01.T01:CDS |
| AGACATCTAGATCATTCAAC+AGG | 0.469504 | 8:-78038296 | None:intergenic |
| TCAGATCAACATGCTGAAGT+TGG | 0.473467 | 8:-78038056 | None:intergenic |
| GGTCTTTGTGAGATTGCAAA+AGG | 0.475591 | 8:+78037238 | MsG0880046781.01.T01:CDS |
| TTAACCATTCAAAACTGTCC+TGG | 0.477543 | 8:+78037991 | MsG0880046781.01.T01:CDS |
| GGCATAGAAAATCCCACATT+GGG | 0.478588 | 8:-78037857 | None:intergenic |
| ACTCTTCCAACTGCAAGCTC+TGG | 0.480930 | 8:-78037822 | None:intergenic |
| GATACAGATTGAATGTAACT+TGG | 0.482768 | 8:-78037422 | None:intergenic |
| TTCAGCGAGCTCTTGAGCAC+GGG | 0.483184 | 8:+78036789 | MsG0880046781.01.T01:CDS |
| CAGGTGCCTGTGTATCAAAA+AGG | 0.484862 | 8:+78036900 | MsG0880046781.01.T01:CDS |
| GCCTCACAATTCTCCAAAAG+AGG | 0.487248 | 8:-78038114 | None:intergenic |
| TTTCCTGGTGAAATTAGGCC+AGG | 0.489686 | 8:+78038431 | MsG0880046781.01.T01:CDS |
| GAGAGTTCCACCATGTAGCC+TGG | 0.492311 | 8:-78038202 | None:intergenic |
| CTTTGTATCCGACATTGGAC+TGG | 0.492327 | 8:+78037771 | MsG0880046781.01.T01:CDS |
| ACATAGTTTCCATGTTGGCC+AGG | 0.504234 | 8:+78038184 | MsG0880046781.01.T01:CDS |
| GGCACATCTGCTTCAGGTGT+GGG | 0.504975 | 8:-78037735 | None:intergenic |
| CTTCAGCGAGCTCTTGAGCA+CGG | 0.505562 | 8:+78036788 | MsG0880046781.01.T01:CDS |
| TGGTTTCGGCAGTGCTAGCA+TGG | 0.505703 | 8:+78038011 | MsG0880046781.01.T01:CDS |
| AGTGCTAGCATGGCTGTGGT+TGG | 0.506787 | 8:+78038021 | MsG0880046781.01.T01:CDS |
| ATGCTCGATGATTGGAAATG+AGG | 0.506806 | 8:+78037372 | MsG0880046781.01.T01:CDS |
| TGCTCGCATCGGTTACCCCT+TGG | 0.507539 | 8:-78037690 | None:intergenic |
| TGCTCGATGATTGGAAATGA+GGG | 0.508764 | 8:+78037373 | MsG0880046781.01.T01:CDS |
| CGCATCGGTTACCCCTTGGC+AGG | 0.510702 | 8:-78037686 | None:intergenic |
| AAGTGTGCAATCACTGATGC+AGG | 0.512250 | 8:+78038321 | MsG0880046781.01.T01:CDS |
| GGTCTCTCAGCAGTTGCTCA+TGG | 0.513210 | 8:+78037160 | MsG0880046781.01.T01:CDS |
| GGAGGAAAGCCACTGATGTA+AGG | 0.514553 | 8:+78037044 | MsG0880046781.01.T01:CDS |
| CGATGCGAGCATCGAAGCCA+TGG | 0.514784 | 8:+78037702 | MsG0880046781.01.T01:CDS |
| ATCTCTCCAGAGCTTGCAGT+TGG | 0.514820 | 8:+78037816 | MsG0880046781.01.T01:CDS |
| TGCGTCATGGGAGTTGCTCA+AGG | 0.518086 | 8:+78037631 | MsG0880046781.01.T01:CDS |
| ACCATGTAGCCTGGCCAACA+TGG | 0.519235 | 8:-78038193 | None:intergenic |
| AAGGTGATGGCTACCTTACA+AGG | 0.519297 | 8:+78037011 | MsG0880046781.01.T01:CDS |
| GTGCTAGCATGGCTGTGGTT+GGG | 0.523567 | 8:+78038022 | MsG0880046781.01.T01:CDS |
| TACCTTACAAGGCGTTTGGA+AGG | 0.525492 | 8:+78037022 | MsG0880046781.01.T01:CDS |
| AGCATCGAAGCCATGGGTAA+AGG | 0.526861 | 8:+78037709 | MsG0880046781.01.T01:CDS |
| TTTACACTTGTGAAGTGTAT+GGG | 0.528626 | 8:+78037910 | MsG0880046781.01.T01:CDS |
| TGTAGCTTTGTATCCGACAT+TGG | 0.531778 | 8:+78037766 | MsG0880046781.01.T01:CDS |
| CTTCAGCATGTTGATCTGAC+TGG | 0.536194 | 8:+78038060 | MsG0880046781.01.T01:CDS |
| TGCAAAAGGATGTCATATGT+TGG | 0.540414 | 8:+78037252 | MsG0880046781.01.T01:CDS |
| CTGATTCTAGTTCGCTTCGT+AGG | 0.543276 | 8:-78036743 | None:intergenic |
| AGATTACATAGTTTCCATGT+TGG | 0.543872 | 8:+78038179 | MsG0880046781.01.T01:CDS |
| GTTGGGACTGGTTGCCGTGG+TGG | 0.544249 | 8:+78037082 | MsG0880046781.01.T01:CDS |
| GTAATGATGAATTGCATCCT+GGG | 0.545999 | 8:+78036675 | MsG0880046781.01.T01:CDS |
| ATCTCAAAGAGACATTCGTC+CGG | 0.551142 | 8:-78036842 | None:intergenic |
| TTCGGCTTCCAACTTGTCAA+AGG | 0.552626 | 8:+78037492 | MsG0880046781.01.T01:CDS |
| ATGCTAGCACTGCCGAAACC+AGG | 0.554879 | 8:-78038009 | None:intergenic |
| CGGCAGTGCTAGCATGGCTG+TGG | 0.556009 | 8:+78038017 | MsG0880046781.01.T01:CDS |
| ATACAGATTGAATGTAACTT+GGG | 0.559199 | 8:-78037421 | None:intergenic |
| AGGCACATCTGCTTCAGGTG+TGG | 0.560606 | 8:-78037736 | None:intergenic |
| GTGAAAGTGATCTGAGAGAA+GGG | 0.561763 | 8:-78037186 | None:intergenic |
| TGGCCTAATTTCACCAGGAA+AGG | 0.564441 | 8:-78038429 | None:intergenic |
| ATGATCAGCACGAGAGAGAA+CGG | 0.564713 | 8:-78038349 | None:intergenic |
| ACCTTACAAGGCGTTTGGAA+GGG | 0.565254 | 8:+78037023 | MsG0880046781.01.T01:CDS |
| AGCTCGCTGAAGAGCTCCAA+AGG | 0.565614 | 8:-78036777 | None:intergenic |
| TAACTATTACTTCCTGCCAA+GGG | 0.575789 | 8:+78037674 | MsG0880046781.01.T01:CDS |
| AAGAGCTCCAAAGGTAAATG+AGG | 0.576760 | 8:-78036768 | None:intergenic |
| GGTTTGATTGCAATAGCTGA+AGG | 0.577016 | 8:+78037316 | MsG0880046781.01.T01:CDS |
| CTCGAAATACTAAACCTCGA+TGG | 0.579655 | 8:+78038222 | MsG0880046781.01.T01:CDS |
| CAAAGAGACATTCGTCCGGA+AGG | 0.580269 | 8:-78036838 | None:intergenic |
| GTGTGGGAAACCTTTACCCA+TGG | 0.581206 | 8:-78037719 | None:intergenic |
| AGCAGCAAGCCTTACATCAG+TGG | 0.584954 | 8:-78037053 | None:intergenic |
| GGGCATAGAAAATCCCACAT+TGG | 0.585502 | 8:-78037858 | None:intergenic |
| CAATGCAATTGAGTTTCTCG+TGG | 0.586036 | 8:+78038497 | MsG0880046781.01.T01:CDS |
| TTCTTCGTCGATCACCAACA+AGG | 0.587327 | 8:+78037294 | MsG0880046781.01.T01:CDS |
| AGAGCAGTGCACATCAACAT+TGG | 0.587717 | 8:-78036720 | None:intergenic |
| GTCTCTTTGAGATATTCAGA+CGG | 0.588078 | 8:+78036852 | MsG0880046781.01.T01:CDS |
| GGGAATTAAAGACATTGATG+TGG | 0.591377 | 8:+78037930 | MsG0880046781.01.T01:CDS |
| TTACAAGGCGTTTGGAAGGG+AGG | 0.593323 | 8:+78037026 | MsG0880046781.01.T01:CDS |
| CCTCACAATTCTCCAAAAGA+GGG | 0.598079 | 8:-78038113 | None:intergenic |
| TGTTATTGGCCATTATGGAA+AGG | 0.600886 | 8:+78037555 | MsG0880046781.01.T01:CDS |
| CTCTCAGATCACTTTCACTG+TGG | 0.601821 | 8:+78037191 | MsG0880046781.01.T01:CDS |
| AGTGAAAGTGATCTGAGAGA+AGG | 0.602549 | 8:-78037187 | None:intergenic |
| CATGGCTTCGATGCTCGCAT+CGG | 0.603091 | 8:-78037701 | None:intergenic |
| GATGAAGATGCTGAAGGTGA+TGG | 0.605262 | 8:+78036998 | MsG0880046781.01.T01:CDS |
| TGTAACAGATTCACCCAATG+TGG | 0.606794 | 8:+78037844 | MsG0880046781.01.T01:CDS |
| AGATCAACATGCTGAAGTTG+GGG | 0.609536 | 8:-78038054 | None:intergenic |
| CTAACTATTACTTCCTGCCA+AGG | 0.610927 | 8:+78037673 | MsG0880046781.01.T01:CDS |
| ACACCATGATCTCCAACAAG+AGG | 0.615650 | 8:-78037454 | None:intergenic |
| TCTTCGTCGATCACCAACAA+GGG | 0.621934 | 8:+78037295 | MsG0880046781.01.T01:CDS |
| AAATGCTGCCAGTCCAATGT+CGG | 0.622406 | 8:-78037779 | None:intergenic |
| AATTCTCCAAAAGAGGGAGA+AGG | 0.622832 | 8:-78038107 | None:intergenic |
| GATGCGAGCATCGAAGCCAT+GGG | 0.623164 | 8:+78037703 | MsG0880046781.01.T01:CDS |
| TTCGTCCGGAAGGATCTCAA+TGG | 0.627959 | 8:-78036828 | None:intergenic |
| CTTTGCGGCATAACTGACGC+TGG | 0.631705 | 8:+78038084 | MsG0880046781.01.T01:CDS |
| ACGCCTGGCCTAATTTCACC+AGG | 0.635894 | 8:-78038434 | None:intergenic |
| ATACAAAGCTACATCTGCGA+AGG | 0.636036 | 8:-78037756 | None:intergenic |
| GTAACGAATCTGGTTCTAAG+TGG | 0.640999 | 8:+78037580 | MsG0880046781.01.T01:CDS |
| TAATGATGAATTGCATCCTG+GGG | 0.643262 | 8:+78036676 | MsG0880046781.01.T01:CDS |
| GCTGTTGGGACTGGTTGCCG+TGG | 0.645340 | 8:+78037079 | MsG0880046781.01.T01:CDS |
| TCAAGTTCCAGCAACCTGCA+AGG | 0.650087 | 8:-78038155 | None:intergenic |
| TTGTGAGGCTGGACTTGTCA+AGG | 0.655559 | 8:+78038128 | MsG0880046781.01.T01:CDS |
| AACTATTACTTCCTGCCAAG+GGG | 0.659376 | 8:+78037675 | MsG0880046781.01.T01:CDS |
| GAGCAACTGCTGAGAGACCG+CGG | 0.662248 | 8:-78037156 | None:intergenic |
| TAATATTCTGGCATCCATCG+AGG | 0.665697 | 8:-78038236 | None:intergenic |
| GTAACAGATTCACCCAATGT+GGG | 0.667862 | 8:+78037845 | MsG0880046781.01.T01:CDS |
| GAGAGTGATGAAGATGCTGA+AGG | 0.668726 | 8:+78036992 | MsG0880046781.01.T01:CDS |
| TCCGGAAGGATCTCAATGGT+AGG | 0.673037 | 8:-78036824 | None:intergenic |
| AGAGGAAACAACTCGACTCG+AGG | 0.676030 | 8:+78037124 | MsG0880046781.01.T01:CDS |
| AAAGATCGAAGAGACTTGCA+AGG | 0.680643 | 8:-78037970 | None:intergenic |
| ATATTCAGACGGCTTCCAAG+TGG | 0.698602 | 8:+78036863 | MsG0880046781.01.T01:CDS |
| ATGTTGGCCAGGCTACATGG+TGG | 0.717767 | 8:+78038195 | MsG0880046781.01.T01:CDS |
| ACTCGAGGTGTTACAGACCG+CGG | 0.719268 | 8:+78037139 | MsG0880046781.01.T01:CDS |
| AATGATGAATTGCATCCTGG+GGG | 0.735856 | 8:+78036677 | MsG0880046781.01.T01:CDS |
| ATAGCTTTCCAAGTCCACCA+CGG | 0.754154 | 8:-78037096 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATACAGATTGAATGTAACTT+GGG | - | Chr8:78037424-78037443 | None:intergenic | 25.0% |
| ! | TTAAAAATGTAAGCGAAAGA+GGG | + | Chr8:78037605-78037624 | MsG0880046781.01.T01:CDS | 25.0% |
| AACTTGCATCAGTAATATTC+TGG | - | Chr8:78038251-78038270 | None:intergenic | 30.0% | |
| AGATTACATAGTTTCCATGT+TGG | + | Chr8:78038179-78038198 | MsG0880046781.01.T01:CDS | 30.0% | |
| ATTTACACTTGTGAAGTGTA+TGG | + | Chr8:78037909-78037928 | MsG0880046781.01.T01:CDS | 30.0% | |
| CTTAAAAATGTAAGCGAAAG+AGG | + | Chr8:78037604-78037623 | MsG0880046781.01.T01:CDS | 30.0% | |
| GAATATTACTGATGCAAGTT+TGG | + | Chr8:78038251-78038270 | MsG0880046781.01.T01:CDS | 30.0% | |
| GATACAGATTGAATGTAACT+TGG | - | Chr8:78037425-78037444 | None:intergenic | 30.0% | |
| GTTACATTCAATCTGTATCA+AGG | + | Chr8:78037426-78037445 | MsG0880046781.01.T01:CDS | 30.0% | |
| TTTACACTTGTGAAGTGTAT+GGG | + | Chr8:78037910-78037929 | MsG0880046781.01.T01:CDS | 30.0% | |
| TTTATGGAGATGTGATATTC+TGG | + | Chr8:78038524-78038543 | MsG0880046781.01.T01:CDS | 30.0% | |
| ! | ATGTTTAAGGTTGTCAAGTT+AGG | - | Chr8:78037346-78037365 | None:intergenic | 30.0% |
| ! | TGTTTAAGGTTGTCAAGTTA+GGG | - | Chr8:78037345-78037364 | None:intergenic | 30.0% |
| !! | ACTTCGTTTTGATGTTTGAA+AGG | - | Chr8:78037882-78037901 | None:intergenic | 30.0% |
| !! | CTTCGTTTTGATGTTTGAAA+GGG | - | Chr8:78037881-78037900 | None:intergenic | 30.0% |
| !! | TGTGTCTTGTTTGCTATATT+CGG | + | Chr8:78037474-78037493 | MsG0880046781.01.T01:CDS | 30.0% |
| !!! | GAATATCACTGATTTTTCTC+TGG | + | Chr8:78037531-78037550 | MsG0880046781.01.T01:CDS | 30.0% |
| AAGCTTTACCTTTGACAAGT+TGG | - | Chr8:78037503-78037522 | None:intergenic | 35.0% | |
| AGACATCTAGATCATTCAAC+AGG | - | Chr8:78038299-78038318 | None:intergenic | 35.0% | |
| AGTTTCTCGTGGAGAATTTA+TGG | + | Chr8:78038508-78038527 | MsG0880046781.01.T01:CDS | 35.0% | |
| ATTCAAAACTGTCCTGGTTT+CGG | + | Chr8:78037997-78038016 | MsG0880046781.01.T01:CDS | 35.0% | |
| ATTGAATCATGCTCGATGAT+TGG | + | Chr8:78037364-78037383 | MsG0880046781.01.T01:CDS | 35.0% | |
| CGAGCATGATTCAATGTTTA+AGG | - | Chr8:78037359-78037378 | None:intergenic | 35.0% | |
| CTTGGAAAGCTATCTATTAG+AGG | + | Chr8:78037106-78037125 | MsG0880046781.01.T01:CDS | 35.0% | |
| GGGAATTAAAGACATTGATG+TGG | + | Chr8:78037930-78037949 | MsG0880046781.01.T01:CDS | 35.0% | |
| GTAATGATGAATTGCATCCT+GGG | + | Chr8:78036675-78036694 | MsG0880046781.01.T01:CDS | 35.0% | |
| TAACTATTACTTCCTGCCAA+GGG | + | Chr8:78037674-78037693 | MsG0880046781.01.T01:CDS | 35.0% | |
| TAATGATGAATTGCATCCTG+GGG | + | Chr8:78036676-78036695 | MsG0880046781.01.T01:CDS | 35.0% | |
| TATTGCAATCAAACCCTTGT+TGG | - | Chr8:78037311-78037330 | None:intergenic | 35.0% | |
| TGCAAAAGGATGTCATATGT+TGG | + | Chr8:78037252-78037271 | MsG0880046781.01.T01:CDS | 35.0% | |
| TGTTATTGGCCATTATGGAA+AGG | + | Chr8:78037555-78037574 | MsG0880046781.01.T01:CDS | 35.0% | |
| TTAACCATTCAAAACTGTCC+TGG | + | Chr8:78037991-78038010 | MsG0880046781.01.T01:CDS | 35.0% | |
| ! | GATTTTTCTCTGGCTGTTAT+TGG | + | Chr8:78037541-78037560 | MsG0880046781.01.T01:CDS | 35.0% |
| ! | GTGTCTTCTATTGGTGATAA+GGG | + | Chr8:78037217-78037236 | MsG0880046781.01.T01:CDS | 35.0% |
| ! | TGTGTCTTCTATTGGTGATA+AGG | + | Chr8:78037216-78037235 | MsG0880046781.01.T01:CDS | 35.0% |
| !! | GTCTCTTTGAGATATTCAGA+CGG | + | Chr8:78036852-78036871 | MsG0880046781.01.T01:CDS | 35.0% |
| AAAGATCGAAGAGACTTGCA+AGG | - | Chr8:78037973-78037992 | None:intergenic | 40.0% | |
| AACTATTACTTCCTGCCAAG+GGG | + | Chr8:78037675-78037694 | MsG0880046781.01.T01:CDS | 40.0% | |
| AAGAGCTCCAAAGGTAAATG+AGG | - | Chr8:78036771-78036790 | None:intergenic | 40.0% | |
| AATGATGAATTGCATCCTGG+GGG | + | Chr8:78036677-78036696 | MsG0880046781.01.T01:CDS | 40.0% | |
| AATTCTCCAAAAGAGGGAGA+AGG | - | Chr8:78038110-78038129 | None:intergenic | 40.0% | |
| AGATCAACATGCTGAAGTTG+GGG | - | Chr8:78038057-78038076 | None:intergenic | 40.0% | |
| AGTGAAAGTGATCTGAGAGA+AGG | - | Chr8:78037190-78037209 | None:intergenic | 40.0% | |
| ATACAAAGCTACATCTGCGA+AGG | - | Chr8:78037759-78037778 | None:intergenic | 40.0% | |
| ATCAAGGATTGTCCTCTTGT+TGG | + | Chr8:78037442-78037461 | MsG0880046781.01.T01:CDS | 40.0% | |
| ATCAGTGCCTCATTTACCTT+TGG | + | Chr8:78036761-78036780 | MsG0880046781.01.T01:CDS | 40.0% | |
| ATCTCAAAGAGACATTCGTC+CGG | - | Chr8:78036845-78036864 | None:intergenic | 40.0% | |
| ATGCTCGATGATTGGAAATG+AGG | + | Chr8:78037372-78037391 | MsG0880046781.01.T01:CDS | 40.0% | |
| CAATGCAATTGAGTTTCTCG+TGG | + | Chr8:78038497-78038516 | MsG0880046781.01.T01:CDS | 40.0% | |
| CAGATCAACATGCTGAAGTT+GGG | - | Chr8:78038058-78038077 | None:intergenic | 40.0% | |
| CCTCACAATTCTCCAAAAGA+GGG | - | Chr8:78038116-78038135 | None:intergenic | 40.0% | |
| CTAACTATTACTTCCTGCCA+AGG | + | Chr8:78037673-78037692 | MsG0880046781.01.T01:CDS | 40.0% | |
| CTCGAAATACTAAACCTCGA+TGG | + | Chr8:78038222-78038241 | MsG0880046781.01.T01:CDS | 40.0% | |
| CTGTGGAATGTGTCTTCTAT+TGG | + | Chr8:78037208-78037227 | MsG0880046781.01.T01:CDS | 40.0% | |
| GGCATAGAAAATCCCACATT+GGG | - | Chr8:78037860-78037879 | None:intergenic | 40.0% | |
| GGTAATGATGAATTGCATCC+TGG | + | Chr8:78036674-78036693 | MsG0880046781.01.T01:CDS | 40.0% | |
| GGTCTTTGTGAGATTGCAAA+AGG | + | Chr8:78037238-78037257 | MsG0880046781.01.T01:CDS | 40.0% | |
| GGTTTGATTGCAATAGCTGA+AGG | + | Chr8:78037316-78037335 | MsG0880046781.01.T01:CDS | 40.0% | |
| GTAACAGATTCACCCAATGT+GGG | + | Chr8:78037845-78037864 | MsG0880046781.01.T01:CDS | 40.0% | |
| GTGAAAGTGATCTGAGAGAA+GGG | - | Chr8:78037189-78037208 | None:intergenic | 40.0% | |
| TAATATTCTGGCATCCATCG+AGG | - | Chr8:78038239-78038258 | None:intergenic | 40.0% | |
| TCAGATCAACATGCTGAAGT+TGG | - | Chr8:78038059-78038078 | None:intergenic | 40.0% | |
| TCGTTACTGCCTTTCCATAA+TGG | - | Chr8:78037567-78037586 | None:intergenic | 40.0% | |
| TGCTCGATGATTGGAAATGA+GGG | + | Chr8:78037373-78037392 | MsG0880046781.01.T01:CDS | 40.0% | |
| TGTAACAGATTCACCCAATG+TGG | + | Chr8:78037844-78037863 | MsG0880046781.01.T01:CDS | 40.0% | |
| ! | AAGCCACCTTTTTGATACAC+AGG | - | Chr8:78036909-78036928 | None:intergenic | 40.0% |
| !! | GTAACGAATCTGGTTCTAAG+TGG | + | Chr8:78037580-78037599 | MsG0880046781.01.T01:CDS | 40.0% |
| !! | TGTAGCTTTGTATCCGACAT+TGG | + | Chr8:78037766-78037785 | MsG0880046781.01.T01:CDS | 40.0% |
| !!! | GAAACCAGGACAGTTTTGAA+TGG | - | Chr8:78037998-78038017 | None:intergenic | 40.0% |
| AAATGCTGCCAGTCCAATGT+CGG | - | Chr8:78037782-78037801 | None:intergenic | 45.0% | |
| AAGTGTGCAATCACTGATGC+AGG | + | Chr8:78038321-78038340 | MsG0880046781.01.T01:CDS | 45.0% | |
| ACACCATGATCTCCAACAAG+AGG | - | Chr8:78037457-78037476 | None:intergenic | 45.0% | |
| ACATAGTTTCCATGTTGGCC+AGG | + | Chr8:78038184-78038203 | MsG0880046781.01.T01:CDS | 45.0% | |
| AGAGCAGTGCACATCAACAT+TGG | - | Chr8:78036723-78036742 | None:intergenic | 45.0% | |
| ATAGCTTTCCAAGTCCACCA+CGG | - | Chr8:78037099-78037118 | None:intergenic | 45.0% | |
| ATATTCAGACGGCTTCCAAG+TGG | + | Chr8:78036863-78036882 | MsG0880046781.01.T01:CDS | 45.0% | |
| ATGATCAGCACGAGAGAGAA+CGG | - | Chr8:78038352-78038371 | None:intergenic | 45.0% | |
| CAGGTGCCTGTGTATCAAAA+AGG | + | Chr8:78036900-78036919 | MsG0880046781.01.T01:CDS | 45.0% | |
| CTCTCAGATCACTTTCACTG+TGG | + | Chr8:78037191-78037210 | MsG0880046781.01.T01:CDS | 45.0% | |
| CTCTCTATGTCTGACTGTTC+AGG | + | Chr8:78038387-78038406 | MsG0880046781.01.T01:CDS | 45.0% | |
| CTGGAGAGATCTTGTGCATT+TGG | - | Chr8:78037806-78037825 | None:intergenic | 45.0% | |
| CTGGCTGTTATTGGCCATTA+TGG | + | Chr8:78037550-78037569 | MsG0880046781.01.T01:CDS | 45.0% | |
| CTTCAGCATGTTGATCTGAC+TGG | + | Chr8:78038060-78038079 | MsG0880046781.01.T01:CDS | 45.0% | |
| CTTTGTATCCGACATTGGAC+TGG | + | Chr8:78037771-78037790 | MsG0880046781.01.T01:CDS | 45.0% | |
| GAGAGTGATGAAGATGCTGA+AGG | + | Chr8:78036992-78037011 | MsG0880046781.01.T01:CDS | 45.0% | |
| GATGAAGATGCTGAAGGTGA+TGG | + | Chr8:78036998-78037017 | MsG0880046781.01.T01:CDS | 45.0% | |
| GCCTCACAATTCTCCAAAAG+AGG | - | Chr8:78038117-78038136 | None:intergenic | 45.0% | |
| GGGCATAGAAAATCCCACAT+TGG | - | Chr8:78037861-78037880 | None:intergenic | 45.0% | |
| GTGCCTGTGTATCAAAAAGG+TGG | + | Chr8:78036903-78036922 | MsG0880046781.01.T01:CDS | 45.0% | |
| GTGCCTTTCCTGGTGAAATT+AGG | + | Chr8:78038426-78038445 | MsG0880046781.01.T01:CDS | 45.0% | |
| GTTGATCTGACTGGACTTTG+CGG | + | Chr8:78038069-78038088 | MsG0880046781.01.T01:CDS | 45.0% | |
| TCTTCGTCGATCACCAACAA+GGG | + | Chr8:78037295-78037314 | MsG0880046781.01.T01:CDS | 45.0% | |
| TGGAAAGGCAGTAACGAATC+TGG | + | Chr8:78037570-78037589 | MsG0880046781.01.T01:CDS | 45.0% | |
| TGGCCTAATTTCACCAGGAA+AGG | - | Chr8:78038432-78038451 | None:intergenic | 45.0% | |
| TGTCCTCTTGTTGGAGATCA+TGG | + | Chr8:78037451-78037470 | MsG0880046781.01.T01:CDS | 45.0% | |
| TTCGGCTTCCAACTTGTCAA+AGG | + | Chr8:78037492-78037511 | MsG0880046781.01.T01:CDS | 45.0% | |
| TTCTTCGTCGATCACCAACA+AGG | + | Chr8:78037294-78037313 | MsG0880046781.01.T01:CDS | 45.0% | |
| TTTCCTGGTGAAATTAGGCC+AGG | + | Chr8:78038431-78038450 | MsG0880046781.01.T01:CDS | 45.0% | |
| ! | AAGGTGATGGCTACCTTACA+AGG | + | Chr8:78037011-78037030 | MsG0880046781.01.T01:CDS | 45.0% |
| ! | ACCTTACAAGGCGTTTGGAA+GGG | + | Chr8:78037023-78037042 | MsG0880046781.01.T01:CDS | 45.0% |
| ! | GAAAGAGGGTTTTGCGTCAT+GGG | + | Chr8:78037619-78037638 | MsG0880046781.01.T01:CDS | 45.0% |
| ! | TACCTTACAAGGCGTTTGGA+AGG | + | Chr8:78037022-78037041 | MsG0880046781.01.T01:CDS | 45.0% |
| !! | CCCTCTTTTGGAGAATTGTG+AGG | + | Chr8:78038113-78038132 | MsG0880046781.01.T01:CDS | 45.0% |
| !! | CTGATTCTAGTTCGCTTCGT+AGG | - | Chr8:78036746-78036765 | None:intergenic | 45.0% |
| !! | CTTTTGGAGAATTGTGAGGC+TGG | + | Chr8:78038117-78038136 | MsG0880046781.01.T01:CDS | 45.0% |
| !! | TGTTGGTGATCGACGAAGAA+TGG | - | Chr8:78037294-78037313 | None:intergenic | 45.0% |
| ACTCTTCCAACTGCAAGCTC+TGG | - | Chr8:78037825-78037844 | None:intergenic | 50.0% | |
| AGCAGCAAGCCTTACATCAG+TGG | - | Chr8:78037056-78037075 | None:intergenic | 50.0% | |
| AGTGGCAAAGAGAGAAGCTC+AGG | + | Chr8:78036881-78036900 | MsG0880046781.01.T01:CDS | 50.0% | |
| ATCTCTCCAGAGCTTGCAGT+TGG | + | Chr8:78037816-78037835 | MsG0880046781.01.T01:CDS | 50.0% | |
| ATGAATTGCATCCTGGGGGT+AGG | + | Chr8:78036681-78036700 | MsG0880046781.01.T01:CDS | 50.0% | |
| CAAAGAGACATTCGTCCGGA+AGG | - | Chr8:78036841-78036860 | None:intergenic | 50.0% | |
| CTTGTCAAGGTGAACCTTGC+AGG | + | Chr8:78038141-78038160 | MsG0880046781.01.T01:CDS | 50.0% | |
| GAACAAGTGTGTGCCTTTCC+TGG | + | Chr8:78038416-78038435 | MsG0880046781.01.T01:CDS | 50.0% | |
| GAGCTTCTCTCTTTGCCACT+TGG | - | Chr8:78036881-78036900 | None:intergenic | 50.0% | |
| GCCTACCATTGAGATCCTTC+CGG | + | Chr8:78036823-78036842 | MsG0880046781.01.T01:CDS | 50.0% | |
| GGAGGAAAGCCACTGATGTA+AGG | + | Chr8:78037044-78037063 | MsG0880046781.01.T01:CDS | 50.0% | |
| GTGTGGGAAACCTTTACCCA+TGG | - | Chr8:78037722-78037741 | None:intergenic | 50.0% | |
| TCAAGTTCCAGCAACCTGCA+AGG | - | Chr8:78038158-78038177 | None:intergenic | 50.0% | |
| TCCCTTCCAAACGCCTTGTA+AGG | - | Chr8:78037027-78037046 | None:intergenic | 50.0% | |
| TCCGGAAGGATCTCAATGGT+AGG | - | Chr8:78036827-78036846 | None:intergenic | 50.0% | |
| TGAATTGCATCCTGGGGGTA+GGG | + | Chr8:78036682-78036701 | MsG0880046781.01.T01:CDS | 50.0% | |
| TTCGTCCGGAAGGATCTCAA+TGG | - | Chr8:78036831-78036850 | None:intergenic | 50.0% | |
| TTGTGAGGCTGGACTTGTCA+AGG | + | Chr8:78038128-78038147 | MsG0880046781.01.T01:CDS | 50.0% | |
| ! | AAATTAGGCCAGGCGTTGTC+GGG | + | Chr8:78038441-78038460 | MsG0880046781.01.T01:CDS | 50.0% |
| ! | AGAGGAAACAACTCGACTCG+AGG | + | Chr8:78037124-78037143 | MsG0880046781.01.T01:CDS | 50.0% |
| ! | AGCATCGAAGCCATGGGTAA+AGG | + | Chr8:78037709-78037728 | MsG0880046781.01.T01:CDS | 50.0% |
| ! | CGAAAGAGGGTTTTGCGTCA+TGG | + | Chr8:78037618-78037637 | MsG0880046781.01.T01:CDS | 50.0% |
| ! | GAAATTAGGCCAGGCGTTGT+CGG | + | Chr8:78038440-78038459 | MsG0880046781.01.T01:CDS | 50.0% |
| ! | TGGCTACCTTACAAGGCGTT+TGG | + | Chr8:78037018-78037037 | MsG0880046781.01.T01:CDS | 50.0% |
| ! | TTACAAGGCGTTTGGAAGGG+AGG | + | Chr8:78037026-78037045 | MsG0880046781.01.T01:CDS | 50.0% |
| !! | AGGCTTGCTGCTATTGCTGT+TGG | + | Chr8:78037064-78037083 | MsG0880046781.01.T01:CDS | 50.0% |
| !! | GGCTTGCTGCTATTGCTGTT+GGG | + | Chr8:78037065-78037084 | MsG0880046781.01.T01:CDS | 50.0% |
| ACCATGTAGCCTGGCCAACA+TGG | - | Chr8:78038196-78038215 | None:intergenic | 55.0% | |
| ACGCCTGGCCTAATTTCACC+AGG | - | Chr8:78038437-78038456 | None:intergenic | 55.0% | |
| AGCTCGCTGAAGAGCTCCAA+AGG | - | Chr8:78036780-78036799 | None:intergenic | 55.0% | |
| AGGCACATCTGCTTCAGGTG+TGG | - | Chr8:78037739-78037758 | None:intergenic | 55.0% | |
| AGGTGAACCTTGCAGGTTGC+TGG | + | Chr8:78038148-78038167 | MsG0880046781.01.T01:CDS | 55.0% | |
| AGTGCTAGCATGGCTGTGGT+TGG | + | Chr8:78038021-78038040 | MsG0880046781.01.T01:CDS | 55.0% | |
| ATAGTGTACACCCTACCCCC+AGG | - | Chr8:78036695-78036714 | None:intergenic | 55.0% | |
| ATGCTAGCACTGCCGAAACC+AGG | - | Chr8:78038012-78038031 | None:intergenic | 55.0% | |
| ATGTTGGCCAGGCTACATGG+TGG | + | Chr8:78038195-78038214 | MsG0880046781.01.T01:CDS | 55.0% | |
| CATGGCTTCGATGCTCGCAT+CGG | - | Chr8:78037704-78037723 | None:intergenic | 55.0% | |
| CTTCAGCGAGCTCTTGAGCA+CGG | + | Chr8:78036788-78036807 | MsG0880046781.01.T01:CDS | 55.0% | |
| CTTTGCGGCATAACTGACGC+TGG | + | Chr8:78038084-78038103 | MsG0880046781.01.T01:CDS | 55.0% | |
| GAGAGTTCCACCATGTAGCC+TGG | - | Chr8:78038205-78038224 | None:intergenic | 55.0% | |
| GGCACATCTGCTTCAGGTGT+GGG | - | Chr8:78037738-78037757 | None:intergenic | 55.0% | |
| GGTCTCTCAGCAGTTGCTCA+TGG | + | Chr8:78037160-78037179 | MsG0880046781.01.T01:CDS | 55.0% | |
| GTGCTAGCATGGCTGTGGTT+GGG | + | Chr8:78038022-78038041 | MsG0880046781.01.T01:CDS | 55.0% | |
| TATTCAAGCCCGACAACGCC+TGG | - | Chr8:78038452-78038471 | None:intergenic | 55.0% | |
| TCCATGTTGGCCAGGCTACA+TGG | + | Chr8:78038192-78038211 | MsG0880046781.01.T01:CDS | 55.0% | |
| TGCGTCATGGGAGTTGCTCA+AGG | + | Chr8:78037631-78037650 | MsG0880046781.01.T01:CDS | 55.0% | |
| TGGTTTCGGCAGTGCTAGCA+TGG | + | Chr8:78038011-78038030 | MsG0880046781.01.T01:CDS | 55.0% | |
| TTCAGCGAGCTCTTGAGCAC+GGG | + | Chr8:78036789-78036808 | MsG0880046781.01.T01:CDS | 55.0% | |
| ! | ACTCGAGGTGTTACAGACCG+CGG | + | Chr8:78037139-78037158 | MsG0880046781.01.T01:CDS | 55.0% |
| ! | GCTGCTATTGCTGTTGGGAC+TGG | + | Chr8:78037070-78037089 | MsG0880046781.01.T01:CDS | 55.0% |
| ! | TGCGAAGGCACATCTGCTTC+AGG | - | Chr8:78037744-78037763 | None:intergenic | 55.0% |
| !! | GATGCGAGCATCGAAGCCAT+GGG | + | Chr8:78037703-78037722 | MsG0880046781.01.T01:CDS | 55.0% |
| GAGCAACTGCTGAGAGACCG+CGG | - | Chr8:78037159-78037178 | None:intergenic | 60.0% | |
| !! | ACTGGTTGCCGTGGTGGACT+TGG | + | Chr8:78037088-78037107 | MsG0880046781.01.T01:CDS | 60.0% |
| !! | CGATGCGAGCATCGAAGCCA+TGG | + | Chr8:78037702-78037721 | MsG0880046781.01.T01:CDS | 60.0% |
| !! | TGCTCGCATCGGTTACCCCT+TGG | - | Chr8:78037693-78037712 | None:intergenic | 60.0% |
| !!! | CGCTGGCCTTCTCCCTCTTT+TGG | + | Chr8:78038101-78038120 | MsG0880046781.01.T01:CDS | 60.0% |
| CGGCAGTGCTAGCATGGCTG+TGG | + | Chr8:78038017-78038036 | MsG0880046781.01.T01:CDS | 65.0% | |
| !! | CGCATCGGTTACCCCTTGGC+AGG | - | Chr8:78037689-78037708 | None:intergenic | 65.0% |
| !! | GCTGTTGGGACTGGTTGCCG+TGG | + | Chr8:78037079-78037098 | MsG0880046781.01.T01:CDS | 65.0% |
| !! | GTTGGGACTGGTTGCCGTGG+TGG | + | Chr8:78037082-78037101 | MsG0880046781.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 78036662 | 78038551 | 78036662 | ID=MsG0880046781.01;Name=MsG0880046781.01 |
| Chr8 | mRNA | 78036662 | 78038551 | 78036662 | ID=MsG0880046781.01.T01;Parent=MsG0880046781.01;Name=MsG0880046781.01.T01;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|1|1|0|629 |
| Chr8 | exon | 78036662 | 78038551 | 78036662 | ID=MsG0880046781.01.T01:exon:18606;Parent=MsG0880046781.01.T01 |
| Chr8 | CDS | 78036662 | 78038551 | 78036662 | ID=MsG0880046781.01.T01:cds;Parent=MsG0880046781.01.T01 |
| Gene Sequence |
| Protein sequence |
