Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046784.01.T01 | KEH32122.1 | 84.211 | 627 | 40 | 4 | 1 | 597 | 1 | 598 | 0 | 995 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046784.01.T01 | Q9SKK0 | 48.58 | 634 | 280 | 9 | 1 | 598 | 5 | 628 | 0 | 566 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046784.01.T01 | A0A072UR15 | 84.211 | 627 | 40 | 4 | 1 | 597 | 1 | 598 | 0.0 | 995 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000476.01 | MsG0880046784.01 | 0.804187 | 2.436279e-49 | 1.248055e-46 |
| MsG0180004041.01 | MsG0880046784.01 | 0.813238 | 2.832197e-51 | 1.839357e-48 |
| MsG0180004044.01 | MsG0880046784.01 | 0.816773 | 4.652354e-52 | 3.326933e-49 |
| MsG0480023189.01 | MsG0880046784.01 | 0.821041 | 4.984261e-53 | 4.010864e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180004542.01 | MsG0880046784.01 | PPI |
| MsG0880046784.01 | MsG0180005325.01 | PPI |
| MsG0880046784.01 | MsG0580027927.01 | PPI |
| MsG0180003335.01 | MsG0880046784.01 | PPI |
| MsG0880046784.01 | MsG0680030840.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046784.01.T01 | MTR_4g114650 | 84.211 | 627 | 40 | 4 | 1 | 597 | 1 | 598 | 0.0 | 995 |
| MsG0880046784.01.T01 | MTR_4g114650 | 84.084 | 622 | 40 | 4 | 6 | 597 | 10 | 602 | 0.0 | 983 |
| MsG0880046784.01.T01 | MTR_4g114650 | 84.084 | 622 | 40 | 4 | 6 | 597 | 61 | 653 | 0.0 | 982 |
| MsG0880046784.01.T01 | MTR_4g114640 | 77.883 | 633 | 103 | 4 | 3 | 598 | 1 | 633 | 0.0 | 899 |
| MsG0880046784.01.T01 | MTR_1g012520 | 55.259 | 637 | 244 | 5 | 3 | 598 | 7 | 643 | 0.0 | 661 |
| MsG0880046784.01.T01 | MTR_3g107280 | 52.174 | 598 | 253 | 4 | 32 | 597 | 44 | 640 | 0.0 | 578 |
| MsG0880046784.01.T01 | MTR_2g021030 | 27.352 | 574 | 357 | 16 | 58 | 584 | 11 | 571 | 4.72e-35 | 140 |
| MsG0880046784.01.T01 | MTR_2g021030 | 29.368 | 269 | 158 | 5 | 138 | 406 | 340 | 576 | 4.08e-23 | 104 |
| MsG0880046784.01.T01 | MTR_2g021030 | 25.879 | 398 | 223 | 8 | 137 | 528 | 262 | 593 | 3.76e-22 | 101 |
| MsG0880046784.01.T01 | MTR_2g021030 | 29.504 | 383 | 228 | 15 | 213 | 589 | 127 | 473 | 3.12e-21 | 98.2 |
| MsG0880046784.01.T01 | MTR_7g112570 | 29.590 | 463 | 283 | 15 | 148 | 593 | 184 | 620 | 1.61e-26 | 115 |
| MsG0880046784.01.T01 | MTR_7g112570 | 29.091 | 165 | 116 | 1 | 157 | 321 | 474 | 637 | 8.11e-12 | 68.6 |
| MsG0880046784.01.T01 | MTR_1g114610 | 26.728 | 434 | 261 | 14 | 56 | 473 | 18 | 410 | 2.19e-26 | 112 |
| MsG0880046784.01.T01 | MTR_1g114610 | 26.441 | 295 | 208 | 6 | 290 | 579 | 95 | 385 | 1.40e-17 | 85.9 |
| MsG0880046784.01.T01 | MTR_2g021030 | 26.147 | 436 | 268 | 11 | 58 | 449 | 11 | 436 | 3.31e-25 | 109 |
| MsG0880046784.01.T01 | MTR_2g021030 | 28.704 | 324 | 203 | 12 | 213 | 524 | 127 | 434 | 3.68e-18 | 87.8 |
| MsG0880046784.01.T01 | MTR_2g021030 | 32.609 | 138 | 81 | 2 | 138 | 271 | 314 | 443 | 4.87e-11 | 65.9 |
| MsG0880046784.01.T01 | MTR_7g112570 | 29.263 | 434 | 260 | 12 | 148 | 548 | 184 | 603 | 5.59e-24 | 107 |
| MsG0880046784.01.T01 | MTR_7g112570 | 23.981 | 417 | 273 | 11 | 176 | 587 | 135 | 512 | 1.71e-16 | 83.6 |
| MsG0880046784.01.T01 | MTR_7g112570 | 29.302 | 430 | 257 | 12 | 148 | 544 | 184 | 599 | 7.07e-24 | 106 |
| MsG0880046784.01.T01 | MTR_7g112570 | 23.981 | 417 | 273 | 11 | 176 | 587 | 135 | 512 | 1.67e-16 | 83.6 |
| MsG0880046784.01.T01 | MTR_8g028140 | 26.870 | 361 | 233 | 9 | 54 | 397 | 18 | 364 | 1.28e-18 | 88.6 |
| MsG0880046784.01.T01 | MTR_8g028140 | 25.862 | 232 | 140 | 7 | 305 | 524 | 97 | 308 | 7.27e-11 | 64.7 |
| MsG0880046784.01.T01 | MTR_4g013255 | 28.475 | 446 | 269 | 17 | 124 | 536 | 133 | 561 | 3.80e-18 | 89.0 |
| MsG0880046784.01.T01 | MTR_4g013255 | 26.136 | 440 | 271 | 15 | 161 | 563 | 88 | 510 | 4.60e-16 | 82.0 |
| MsG0880046784.01.T01 | MTR_4g013255 | 27.778 | 162 | 115 | 2 | 160 | 321 | 447 | 606 | 1.41e-14 | 77.4 |
| MsG0880046784.01.T01 | MTR_4g013255 | 24.011 | 379 | 226 | 12 | 160 | 510 | 241 | 585 | 7.10e-14 | 75.1 |
| MsG0880046784.01.T01 | MTR_3g088895 | 27.586 | 319 | 172 | 10 | 137 | 426 | 60 | 348 | 2.27e-17 | 84.7 |
| MsG0880046784.01.T01 | MTR_1g029500 | 27.706 | 231 | 129 | 4 | 183 | 401 | 98 | 302 | 3.90e-17 | 83.6 |
| MsG0880046784.01.T01 | MTR_1g029500 | 33.333 | 150 | 93 | 3 | 128 | 276 | 127 | 270 | 2.26e-13 | 72.4 |
| MsG0880046784.01.T01 | MTR_1g029500 | 26.877 | 253 | 157 | 4 | 158 | 382 | 99 | 351 | 9.96e-13 | 70.1 |
| MsG0880046784.01.T01 | MTR_8g028140 | 28.679 | 265 | 164 | 6 | 146 | 397 | 32 | 284 | 3.68e-16 | 80.1 |
| MsG0880046784.01.T01 | MTR_8g028140 | 25.862 | 232 | 140 | 7 | 305 | 524 | 17 | 228 | 3.78e-11 | 65.1 |
| MsG0880046784.01.T01 | MTR_8g028140 | 26.335 | 281 | 197 | 5 | 176 | 455 | 17 | 288 | 4.37e-11 | 64.7 |
| MsG0880046784.01.T01 | MTR_1g054625 | 29.218 | 243 | 162 | 5 | 157 | 393 | 88 | 326 | 5.17e-16 | 80.1 |
| MsG0880046784.01.T01 | MTR_1g054625 | 29.864 | 221 | 149 | 4 | 175 | 393 | 13 | 229 | 9.73e-16 | 77.8 |
| MsG0880046784.01.T01 | MTR_1g015450 | 25.062 | 403 | 222 | 15 | 173 | 537 | 339 | 699 | 4.57e-15 | 79.3 |
| MsG0880046784.01.T01 | MTR_1g015480 | 24.515 | 412 | 230 | 18 | 164 | 537 | 149 | 517 | 6.66e-13 | 72.4 |
| MsG0880046784.01.T01 | MTR_4g036815 | 24.700 | 417 | 273 | 15 | 57 | 454 | 81 | 475 | 3.43e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046784.01.T01 | AT2G25490 | 48.580 | 634 | 280 | 9 | 1 | 598 | 5 | 628 | 0.0 | 566 |
| MsG0880046784.01.T01 | AT5G25350 | 49.525 | 632 | 266 | 10 | 3 | 597 | 7 | 622 | 0.0 | 545 |
| MsG0880046784.01.T01 | AT4G15475 | 27.383 | 577 | 353 | 18 | 58 | 584 | 11 | 571 | 2.52e-38 | 150 |
| MsG0880046784.01.T01 | AT4G15475 | 28.000 | 325 | 222 | 7 | 123 | 446 | 275 | 588 | 1.53e-25 | 111 |
| MsG0880046784.01.T01 | AT4G15475 | 29.885 | 174 | 114 | 4 | 137 | 310 | 443 | 608 | 3.10e-13 | 73.2 |
| MsG0880046784.01.T01 | AT5G23340 | 26.415 | 424 | 268 | 11 | 56 | 470 | 8 | 396 | 1.19e-25 | 110 |
| MsG0880046784.01.T01 | AT5G23340 | 26.159 | 302 | 194 | 5 | 255 | 554 | 75 | 349 | 5.96e-19 | 89.7 |
| MsG0880046784.01.T01 | AT5G23340 | 30.769 | 182 | 121 | 4 | 412 | 590 | 100 | 279 | 1.38e-11 | 67.0 |
| MsG0880046784.01.T01 | AT5G27920 | 24.809 | 524 | 307 | 16 | 145 | 589 | 90 | 605 | 5.12e-22 | 100 |
| MsG0880046784.01.T01 | AT5G01720 | 25.405 | 370 | 230 | 9 | 160 | 501 | 238 | 589 | 8.18e-20 | 94.0 |
| MsG0880046784.01.T01 | AT5G01720 | 25.355 | 493 | 278 | 16 | 161 | 573 | 85 | 567 | 1.19e-15 | 80.9 |
| MsG0880046784.01.T01 | AT5G01720 | 26.174 | 298 | 189 | 6 | 161 | 433 | 316 | 607 | 4.10e-13 | 72.8 |
| MsG0880046784.01.T01 | AT1G21410 | 26.042 | 288 | 157 | 7 | 189 | 475 | 106 | 338 | 2.06e-17 | 84.7 |
| MsG0880046784.01.T01 | AT1G21410 | 25.417 | 240 | 113 | 5 | 161 | 371 | 130 | 332 | 1.54e-12 | 69.7 |
| MsG0880046784.01.T01 | AT1G21410 | 26.042 | 288 | 157 | 7 | 189 | 475 | 106 | 338 | 2.06e-17 | 84.7 |
| MsG0880046784.01.T01 | AT1G21410 | 25.417 | 240 | 113 | 5 | 161 | 371 | 130 | 332 | 1.54e-12 | 69.7 |
| MsG0880046784.01.T01 | AT1G77000 | 25.517 | 290 | 160 | 6 | 186 | 474 | 103 | 337 | 2.86e-17 | 84.3 |
| MsG0880046784.01.T01 | AT1G77000 | 27.119 | 236 | 130 | 5 | 125 | 359 | 126 | 320 | 1.58e-13 | 72.8 |
| MsG0880046784.01.T01 | AT1G77000 | 25.517 | 290 | 160 | 6 | 186 | 474 | 103 | 337 | 2.86e-17 | 84.3 |
| MsG0880046784.01.T01 | AT1G77000 | 27.119 | 236 | 130 | 5 | 125 | 359 | 126 | 320 | 1.58e-13 | 72.8 |
| MsG0880046784.01.T01 | AT3G58530 | 27.523 | 218 | 151 | 6 | 139 | 354 | 102 | 314 | 2.63e-14 | 75.1 |
| MsG0880046784.01.T01 | AT3G58530 | 23.392 | 342 | 193 | 10 | 174 | 505 | 53 | 335 | 6.89e-14 | 73.9 |
| MsG0880046784.01.T01 | AT4G33210 | 24.069 | 403 | 225 | 16 | 173 | 524 | 348 | 720 | 4.41e-12 | 69.7 |
| MsG0880046784.01.T01 | AT3G07550 | 23.656 | 372 | 256 | 7 | 46 | 401 | 6 | 365 | 4.92e-12 | 68.6 |
| MsG0880046784.01.T01 | AT3G07550 | 23.656 | 372 | 256 | 7 | 46 | 401 | 6 | 365 | 4.92e-12 | 68.6 |
| MsG0880046784.01.T01 | AT4G30640 | 29.048 | 210 | 130 | 5 | 43 | 250 | 8 | 200 | 7.75e-12 | 67.0 |
| MsG0880046784.01.T01 | AT1G47056 | 31.609 | 174 | 104 | 5 | 118 | 287 | 260 | 422 | 5.65e-11 | 65.9 |
| MsG0880046784.01.T01 | AT1G77000 | 28.221 | 163 | 91 | 2 | 186 | 348 | 103 | 239 | 7.78e-11 | 63.5 |
| MsG0880046784.01.T01 | AT1G77000 | 28.221 | 163 | 91 | 2 | 186 | 348 | 103 | 239 | 7.78e-11 | 63.5 |
| MsG0880046784.01.T01 | AT3G07550 | 23.626 | 364 | 239 | 7 | 46 | 401 | 6 | 338 | 8.45e-11 | 64.7 |
Find 147 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAACATGATTCAATGTTTA+AGG | 0.105062 | 8:-78088131 | None:intergenic |
| TCAAGTTGCAGCAACCTTTA+AGG | 0.112650 | 8:-78088929 | None:intergenic |
| AGTTTCTCATGGAGAATTTA+TGG | 0.175014 | 8:+78089282 | MsG0880046784.01.T01:CDS |
| AGCTGGCCTTCTCCCTCTTT+TGG | 0.181327 | 8:+78088875 | MsG0880046784.01.T01:CDS |
| GTGCCTTTCCTTATGAAATT+AGG | 0.243973 | 8:+78089200 | MsG0880046784.01.T01:CDS |
| GGTGATGTTGAACTGCATTC+TGG | 0.245805 | 8:+78087455 | MsG0880046784.01.T01:CDS |
| GATATTTCTCTGGCTGTTAT+TGG | 0.275670 | 8:+78088316 | MsG0880046784.01.T01:CDS |
| ATGTTTAAGGTTGTCAAGTT+AGG | 0.283107 | 8:-78088118 | None:intergenic |
| GGCACATCTGCTTCAGGTTT+GGG | 0.286321 | 8:-78088510 | None:intergenic |
| CATCTATGCTTTCACCTTGC+AGG | 0.318193 | 8:+78088731 | MsG0880046784.01.T01:CDS |
| CTTGTCAAGGTGAACCTTAA+AGG | 0.326316 | 8:+78088915 | MsG0880046784.01.T01:CDS |
| AGGCACATCTGCTTCAGGTT+TGG | 0.328088 | 8:-78088511 | None:intergenic |
| TTTATGGAGATGTGATATTC+TGG | 0.332414 | 8:+78089298 | MsG0880046784.01.T01:CDS |
| GAATATTACTGATGCAAGTT+TGG | 0.340768 | 8:+78089025 | MsG0880046784.01.T01:CDS |
| AACTTGCATCAGTAATATTC+TGG | 0.341063 | 8:-78089022 | None:intergenic |
| CTCTCTATGTCTGACTGTTC+TGG | 0.342287 | 8:+78089161 | MsG0880046784.01.T01:CDS |
| ATTGAATCATGTTCTATGAT+TGG | 0.343781 | 8:+78088139 | MsG0880046784.01.T01:CDS |
| ACTTACACTTGTGAAGTGTT+TGG | 0.349484 | 8:+78088684 | MsG0880046784.01.T01:CDS |
| ATGTAAACGAAAGAGGGTTT+TGG | 0.349720 | 8:+78088386 | MsG0880046784.01.T01:CDS |
| TGTCCTCTTGTTGGAGATCC+TGG | 0.350470 | 8:+78088226 | MsG0880046784.01.T01:CDS |
| CTTACACTTGTGAAGTGTTT+GGG | 0.352014 | 8:+78088685 | MsG0880046784.01.T01:CDS |
| ATTAAATATTGCAATGCAAT+TGG | 0.368793 | 8:+78089245 | MsG0880046784.01.T01:CDS |
| ATCATGGGTTGTCCTCTTGT+TGG | 0.374274 | 8:+78088217 | MsG0880046784.01.T01:CDS |
| GTTACATTCAATCTCTATCA+TGG | 0.375507 | 8:+78088201 | MsG0880046784.01.T01:CDS |
| GGCTTGCTGCTATTGCTGTT+GGG | 0.383869 | 8:+78087840 | MsG0880046784.01.T01:CDS |
| ATCAGTGTCTCATTTAGCTT+TGG | 0.387859 | 8:+78087548 | MsG0880046784.01.T01:CDS |
| TACGAAGGCACATCTGCTTC+AGG | 0.388908 | 8:-78088516 | None:intergenic |
| GCTGCTATTGCTGTTGGGAC+TGG | 0.389778 | 8:+78087845 | MsG0880046784.01.T01:CDS |
| GTGATGTTGAACTGCATTCT+GGG | 0.392276 | 8:+78087456 | MsG0880046784.01.T01:CDS |
| TGGGTCATGGGGTTTGGTGA+AGG | 0.394749 | 8:+78088406 | MsG0880046784.01.T01:CDS |
| GAATATTACCGATATTTCTC+TGG | 0.398946 | 8:+78088306 | MsG0880046784.01.T01:CDS |
| TGTGTCTTCCATTGGTGATA+AGG | 0.401503 | 8:+78087991 | MsG0880046784.01.T01:CDS |
| TATTGCAATCAAACCCTTGT+TGG | 0.403057 | 8:-78088083 | None:intergenic |
| ACTGGTTGCCGTGGTGGACT+TGG | 0.405676 | 8:+78087863 | MsG0880046784.01.T01:CDS |
| CTCGAGAGATATTGCAGATC+TGG | 0.411632 | 8:-78088578 | None:intergenic |
| GAAATTAGGCCAGGCATTGT+TGG | 0.413637 | 8:+78089214 | MsG0880046784.01.T01:CDS |
| TCCCTTCCAAACGCCTTGTA+AGG | 0.414436 | 8:-78087799 | None:intergenic |
| AGGCTTGCTGCTATTGCTGT+TGG | 0.416928 | 8:+78087839 | MsG0880046784.01.T01:CDS |
| GTGTCTTCCATTGGTGATAA+GGG | 0.417017 | 8:+78087992 | MsG0880046784.01.T01:CDS |
| GCCTAGCATCGAGATCCTTT+CGG | 0.419585 | 8:+78087598 | MsG0880046784.01.T01:CDS |
| TGGAAAAGTGATATCGAATC+TGG | 0.422327 | 8:+78088345 | MsG0880046784.01.T01:CDS |
| TGGCTACCTTACAAGGCGTT+TGG | 0.422778 | 8:+78087793 | MsG0880046784.01.T01:CDS |
| CTCGTGGTTGCCCTTCTCTC+AGG | 0.423379 | 8:+78087951 | MsG0880046784.01.T01:CDS |
| GAGCTTCTCTCTTTGCCACT+TGG | 0.430900 | 8:-78087653 | None:intergenic |
| TGGTGAAGGTCTACAGAAAC+TGG | 0.431128 | 8:+78088420 | MsG0880046784.01.T01:CDS |
| TGTTTAAGGTTGTCAAGTTA+GGG | 0.434609 | 8:-78088117 | None:intergenic |
| AAATTAGGCCAGGCATTGTT+GGG | 0.435760 | 8:+78089215 | MsG0880046784.01.T01:CDS |
| CGTGTGTAGTTTGTTATCAT+CGG | 0.442981 | 8:+78088249 | MsG0880046784.01.T01:CDS |
| AGTCAAGTTGTTTCCTCTGA+TGG | 0.450037 | 8:-78087894 | None:intergenic |
| ATGTTCTATGATTGGAAATG+AGG | 0.452791 | 8:+78088147 | MsG0880046784.01.T01:CDS |
| AATAACAGCCAGAGAAATAT+CGG | 0.456935 | 8:-78088314 | None:intergenic |
| TCTGAGTTGGCCAGGCTACA+TGG | 0.461491 | 8:+78088966 | MsG0880046784.01.T01:CDS |
| CGTTGTATCCGACGATGGAT+TGG | 0.464778 | 8:+78088546 | MsG0880046784.01.T01:CDS |
| AGTGGCAAAGAGAGAAGCTC+AGG | 0.464804 | 8:+78087656 | MsG0880046784.01.T01:CDS |
| GTTCTATGGATACCGGGAGT+AGG | 0.473593 | 8:+78087480 | MsG0880046784.01.T01:CDS |
| CAGGTGCCTGTGTATCAAAA+AGG | 0.484862 | 8:+78087675 | MsG0880046784.01.T01:CDS |
| AAGTGTGCAATCACCGATGC+AGG | 0.485592 | 8:+78089095 | MsG0880046784.01.T01:CDS |
| ATGCCTGGCCTAATTTCATA+AGG | 0.487377 | 8:-78089208 | None:intergenic |
| ACATAGTTTCTGAGTTGGCC+AGG | 0.488713 | 8:+78088958 | MsG0880046784.01.T01:CDS |
| GGCATCGAAAATCCCACATT+GGG | 0.492253 | 8:-78088632 | None:intergenic |
| GAGAGTTCCACCATGTAGCC+TGG | 0.492311 | 8:-78088976 | None:intergenic |
| ATGATCAGCACGAGCGAGAA+CGG | 0.494819 | 8:-78089123 | None:intergenic |
| TGTTGGTGATCGACGAAGAA+TGG | 0.500627 | 8:-78088066 | None:intergenic |
| ATAGAGATTGAATGTAACTT+AGG | 0.501147 | 8:-78088196 | None:intergenic |
| TATTCAATCCCAACAATGCC+TGG | 0.501998 | 8:-78089223 | None:intergenic |
| CATCGGCTTCCGACTTGTCA+AGG | 0.503121 | 8:+78088266 | MsG0880046784.01.T01:CDS |
| CTGGCTGTTATTGGCCATTG+TGG | 0.505982 | 8:+78088325 | MsG0880046784.01.T01:CDS |
| CTTCGAAATGTAAACGAAAG+AGG | 0.507166 | 8:+78088379 | MsG0880046784.01.T01:CDS |
| CAACGCAATTGAGTTTCTCA+TGG | 0.508699 | 8:+78089271 | MsG0880046784.01.T01:CDS |
| TTCTATGGATACCGGGAGTA+GGG | 0.510872 | 8:+78087481 | MsG0880046784.01.T01:CDS |
| GCTTCACAATTCTCCAAAAG+AGG | 0.511161 | 8:-78088888 | None:intergenic |
| TTTCCTTATGAAATTAGGCC+AGG | 0.512406 | 8:+78089205 | MsG0880046784.01.T01:CDS |
| GGAGGAAAGCCACTGATGTA+AGG | 0.514553 | 8:+78087819 | MsG0880046784.01.T01:CDS |
| AAGGTGATGGCTACCTTACA+AGG | 0.519297 | 8:+78087786 | MsG0880046784.01.T01:CDS |
| TGATAAGAGCATCGAAGCCA+TGG | 0.520771 | 8:+78088477 | MsG0880046784.01.T01:CDS |
| CTGTGGAATGTGTCTTCCAT+TGG | 0.524514 | 8:+78087983 | MsG0880046784.01.T01:CDS |
| CTTATCAGTTACCCCTTCGC+AGG | 0.525291 | 8:-78088461 | None:intergenic |
| TACCTTACAAGGCGTTTGGA+AGG | 0.525492 | 8:+78087797 | MsG0880046784.01.T01:CDS |
| ATCTCTCGAGACCTTGCAGT+TGG | 0.531656 | 8:+78088591 | MsG0880046784.01.T01:CDS |
| AGCATCGAAGCCATGGGTAG+AGG | 0.532085 | 8:+78088484 | MsG0880046784.01.T01:CDS |
| CTAAATGAGACACTGATTCG+AGG | 0.533971 | 8:-78087542 | None:intergenic |
| GTAACCATTCGAAACTGCCC+TGG | 0.535257 | 8:+78088766 | MsG0880046784.01.T01:CDS |
| TTACATTCAATCTCTATCAT+GGG | 0.535296 | 8:+78088202 | MsG0880046784.01.T01:CDS |
| TGCAAAAGGATGTCATATGT+TGG | 0.540414 | 8:+78088027 | MsG0880046784.01.T01:CDS |
| TACCCCTTCGCAGGAAGTAA+TGG | 0.541323 | 8:-78088452 | None:intergenic |
| TGTTCTATGATTGGAAATGA+GGG | 0.541807 | 8:+78088148 | MsG0880046784.01.T01:CDS |
| GTTGGGACTGGTTGCCGTGG+TGG | 0.544249 | 8:+78087857 | MsG0880046784.01.T01:CDS |
| GTGAAAGTGACCTGAGAGAA+GGG | 0.545938 | 8:-78087961 | None:intergenic |
| TTCGAAATGTAAACGAAAGA+GGG | 0.555173 | 8:+78088380 | MsG0880046784.01.T01:CDS |
| AGACGTCTAGATCATTCAGC+AGG | 0.560524 | 8:-78089070 | None:intergenic |
| CTCGAAATACTAAATCTCGA+TGG | 0.562470 | 8:+78088996 | MsG0880046784.01.T01:CDS |
| ACCTTACAAGGCGTTTGGAA+GGG | 0.565254 | 8:+78087798 | MsG0880046784.01.T01:CDS |
| GAATGCAGTTCAACATCACC+TGG | 0.568423 | 8:-78087452 | None:intergenic |
| AGACAACATAGTTTCTGAGT+TGG | 0.569550 | 8:+78088953 | MsG0880046784.01.T01:CDS |
| CTCTCAGGTCACTTTCACTG+TGG | 0.570795 | 8:+78087966 | MsG0880046784.01.T01:CDS |
| GAAACCAGGGCAGTTTCGAA+TGG | 0.572963 | 8:-78088770 | None:intergenic |
| TTACCATTACTTCCTGCGAA+GGG | 0.574629 | 8:+78088449 | MsG0880046784.01.T01:CDS |
| GGTTTGATTGCAATAGCTGA+AGG | 0.577016 | 8:+78088091 | MsG0880046784.01.T01:CDS |
| GGGCATCGAAAATCCCACAT+TGG | 0.583229 | 8:-78088633 | None:intergenic |
| AGCAGCAAGCCTTACATCAG+TGG | 0.584954 | 8:-78087828 | None:intergenic |
| TTCTTCGTCGATCACCAACA+AGG | 0.587327 | 8:+78088069 | MsG0880046784.01.T01:CDS |
| TGGCCTAATTTCATAAGGAA+AGG | 0.589289 | 8:-78089203 | None:intergenic |
| GTTTGGGAAACCTCTACCCA+TGG | 0.589944 | 8:-78088494 | None:intergenic |
| CTTACCATTACTTCCTGCGA+AGG | 0.591692 | 8:+78088448 | MsG0880046784.01.T01:CDS |
| AGTGAAAGTGACCTGAGAGA+AGG | 0.591904 | 8:-78087962 | None:intergenic |
| TGATGTTGAACTGCATTCTG+GGG | 0.592130 | 8:+78087457 | MsG0880046784.01.T01:CDS |
| ACACAGACCCTTATCACCAA+TGG | 0.592165 | 8:-78087999 | None:intergenic |
| TTACAAGGCGTTTGGAAGGG+AGG | 0.593323 | 8:+78087801 | MsG0880046784.01.T01:CDS |
| AAGCTTTACCCTTGACAAGT+CGG | 0.595628 | 8:-78088275 | None:intergenic |
| CTTCACAATTCTCCAAAAGA+GGG | 0.598079 | 8:-78088887 | None:intergenic |
| TCCGAAAGGATCTCGATGCT+AGG | 0.599890 | 8:-78087599 | None:intergenic |
| CAAAGAGACATTCATCCGAA+AGG | 0.601315 | 8:-78087613 | None:intergenic |
| GATGAAGATGCTGAAGGTGA+TGG | 0.605262 | 8:+78087773 | MsG0880046784.01.T01:CDS |
| TGTAACAGATTCACCCAATG+TGG | 0.606794 | 8:+78088619 | MsG0880046784.01.T01:CDS |
| GATAACAAACTACACACGCC+AGG | 0.610237 | 8:-78088244 | None:intergenic |
| TGAAGCAGATGTGCCTTCGT+AGG | 0.612627 | 8:+78088518 | MsG0880046784.01.T01:CDS |
| GATAAGAGCATCGAAGCCAT+GGG | 0.616443 | 8:+78088478 | MsG0880046784.01.T01:CDS |
| ATCGGCTTCCGACTTGTCAA+GGG | 0.617443 | 8:+78088267 | MsG0880046784.01.T01:CDS |
| TACCATTACTTCCTGCGAAG+GGG | 0.619379 | 8:+78088450 | MsG0880046784.01.T01:CDS |
| AATAGTGTACACCCTACTCC+CGG | 0.620803 | 8:-78087492 | None:intergenic |
| TCTTCGTCGATCACCAACAA+GGG | 0.621934 | 8:+78088070 | MsG0880046784.01.T01:CDS |
| AATTCTCCAAAAGAGGGAGA+AGG | 0.622832 | 8:-78088881 | None:intergenic |
| TGTTGCGTTGTATCCGACGA+TGG | 0.623258 | 8:+78088541 | MsG0880046784.01.T01:CDS |
| GGTCTCTCAGCAGTTGCTCG+TGG | 0.624322 | 8:+78087935 | MsG0880046784.01.T01:CDS |
| GGTCTGTGTGAGATTGCAAA+AGG | 0.625248 | 8:+78088013 | MsG0880046784.01.T01:CDS |
| ATATCGAATCTGGCTCTAAG+TGG | 0.626087 | 8:+78088355 | MsG0880046784.01.T01:CDS |
| CGTCTAGATCATTCAGCAGG+AGG | 0.627261 | 8:-78089067 | None:intergenic |
| AAATGCTACCAATCCATCGT+CGG | 0.633075 | 8:-78088554 | None:intergenic |
| GTTACACTCTTCCAACTGCA+AGG | 0.638689 | 8:-78088602 | None:intergenic |
| AGTTTCGAATGGTTACAGAT+CGG | 0.640647 | 8:-78088759 | None:intergenic |
| ACGCCAGGATCTCCAACAAG+AGG | 0.641347 | 8:-78088229 | None:intergenic |
| GCTGTTGGGACTGGTTGCCG+TGG | 0.645340 | 8:+78087854 | MsG0880046784.01.T01:CDS |
| GAGAACGGCTATGCCTGCAT+CGG | 0.646912 | 8:-78089108 | None:intergenic |
| CTTGGAAAGCTATCCATCAG+AGG | 0.654070 | 8:+78087881 | MsG0880046784.01.T01:CDS |
| TTGTGAAGCTGGACTTGTCA+AGG | 0.655559 | 8:+78088902 | MsG0880046784.01.T01:CDS |
| GATGTTGAACTGCATTCTGG+GGG | 0.655981 | 8:+78087458 | MsG0880046784.01.T01:CDS |
| GTAACAGATTCACCCAATGT+GGG | 0.667862 | 8:+78088620 | MsG0880046784.01.T01:CDS |
| GAGAGTGATGAAGATGCTGA+AGG | 0.668726 | 8:+78087767 | MsG0880046784.01.T01:CDS |
| GAGCAACTGCTGAGAGACCG+CGG | 0.671435 | 8:-78087931 | None:intergenic |
| ATACAACGCAACACCTACGA+AGG | 0.675706 | 8:-78088531 | None:intergenic |
| AGAGGAAACAACTTGACTCG+AGG | 0.696364 | 8:+78087899 | MsG0880046784.01.T01:CDS |
| ATATTCAGACGACTTCCAAG+TGG | 0.701548 | 8:+78087638 | MsG0880046784.01.T01:CDS |
| GAGTTGGCCAGGCTACATGG+TGG | 0.718936 | 8:+78088969 | MsG0880046784.01.T01:CDS |
| ACTCGAGGTGTTACAGACCG+CGG | 0.719268 | 8:+78087914 | MsG0880046784.01.T01:CDS |
| ACAGATCGGAGATACCTGCA+AGG | 0.724418 | 8:-78088745 | None:intergenic |
| TGAAGGTCTACAGAAACTGG+TGG | 0.733420 | 8:+78088423 | MsG0880046784.01.T01:CDS |
| ATAGCTTTCCAAGTCCACCA+CGG | 0.765528 | 8:-78087871 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATATTGCAATGCAAT+TGG | + | Chr8:78089245-78089264 | MsG0880046784.01.T01:CDS | 20.0% |
| ! | AGAACATGATTCAATGTTTA+AGG | - | Chr8:78088134-78088153 | None:intergenic | 25.0% |
| ! | ATAGAGATTGAATGTAACTT+AGG | - | Chr8:78088199-78088218 | None:intergenic | 25.0% |
| ! | ATTGAATCATGTTCTATGAT+TGG | + | Chr8:78088139-78088158 | MsG0880046784.01.T01:CDS | 25.0% |
| ! | TTACATTCAATCTCTATCAT+GGG | + | Chr8:78088202-78088221 | MsG0880046784.01.T01:CDS | 25.0% |
| AACTTGCATCAGTAATATTC+TGG | - | Chr8:78089025-78089044 | None:intergenic | 30.0% | |
| AATAACAGCCAGAGAAATAT+CGG | - | Chr8:78088317-78088336 | None:intergenic | 30.0% | |
| AGTTTCTCATGGAGAATTTA+TGG | + | Chr8:78089282-78089301 | MsG0880046784.01.T01:CDS | 30.0% | |
| ATGTTCTATGATTGGAAATG+AGG | + | Chr8:78088147-78088166 | MsG0880046784.01.T01:CDS | 30.0% | |
| GAATATTACCGATATTTCTC+TGG | + | Chr8:78088306-78088325 | MsG0880046784.01.T01:CDS | 30.0% | |
| GAATATTACTGATGCAAGTT+TGG | + | Chr8:78089025-78089044 | MsG0880046784.01.T01:CDS | 30.0% | |
| GTTACATTCAATCTCTATCA+TGG | + | Chr8:78088201-78088220 | MsG0880046784.01.T01:CDS | 30.0% | |
| TGTTCTATGATTGGAAATGA+GGG | + | Chr8:78088148-78088167 | MsG0880046784.01.T01:CDS | 30.0% | |
| TTCGAAATGTAAACGAAAGA+GGG | + | Chr8:78088380-78088399 | MsG0880046784.01.T01:CDS | 30.0% | |
| TTTATGGAGATGTGATATTC+TGG | + | Chr8:78089298-78089317 | MsG0880046784.01.T01:CDS | 30.0% | |
| ! | ATGTTTAAGGTTGTCAAGTT+AGG | - | Chr8:78088121-78088140 | None:intergenic | 30.0% |
| ! | TGTTTAAGGTTGTCAAGTTA+GGG | - | Chr8:78088120-78088139 | None:intergenic | 30.0% |
| !! | ACTTCGTTTTGATGATAGAA+AGG | - | Chr8:78088657-78088676 | None:intergenic | 30.0% |
| !! | CTTCGTTTTGATGATAGAAA+GGG | - | Chr8:78088656-78088675 | None:intergenic | 30.0% |
| AGACAACATAGTTTCTGAGT+TGG | + | Chr8:78088953-78088972 | MsG0880046784.01.T01:CDS | 35.0% | |
| AGTTTCGAATGGTTACAGAT+CGG | - | Chr8:78088762-78088781 | None:intergenic | 35.0% | |
| CTCGAAATACTAAATCTCGA+TGG | + | Chr8:78088996-78089015 | MsG0880046784.01.T01:CDS | 35.0% | |
| CTTCACAATTCTCCAAAAGA+GGG | - | Chr8:78088890-78088909 | None:intergenic | 35.0% | |
| CTTCGAAATGTAAACGAAAG+AGG | + | Chr8:78088379-78088398 | MsG0880046784.01.T01:CDS | 35.0% | |
| GATATTTCTCTGGCTGTTAT+TGG | + | Chr8:78088316-78088335 | MsG0880046784.01.T01:CDS | 35.0% | |
| GTGCCTTTCCTTATGAAATT+AGG | + | Chr8:78089200-78089219 | MsG0880046784.01.T01:CDS | 35.0% | |
| TATTGCAATCAAACCCTTGT+TGG | - | Chr8:78088086-78088105 | None:intergenic | 35.0% | |
| TGCAAAAGGATGTCATATGT+TGG | + | Chr8:78088027-78088046 | MsG0880046784.01.T01:CDS | 35.0% | |
| TGGAAAAGTGATATCGAATC+TGG | + | Chr8:78088345-78088364 | MsG0880046784.01.T01:CDS | 35.0% | |
| TGGCCTAATTTCATAAGGAA+AGG | - | Chr8:78089206-78089225 | None:intergenic | 35.0% | |
| TTTCCTTATGAAATTAGGCC+AGG | + | Chr8:78089205-78089224 | MsG0880046784.01.T01:CDS | 35.0% | |
| ! | ACTTACACTTGTGAAGTGTT+TGG | + | Chr8:78088684-78088703 | MsG0880046784.01.T01:CDS | 35.0% |
| ! | ATCAGTGTCTCATTTAGCTT+TGG | + | Chr8:78087548-78087567 | MsG0880046784.01.T01:CDS | 35.0% |
| ! | ATGTAAACGAAAGAGGGTTT+TGG | + | Chr8:78088386-78088405 | MsG0880046784.01.T01:CDS | 35.0% |
| ! | CTTACACTTGTGAAGTGTTT+GGG | + | Chr8:78088685-78088704 | MsG0880046784.01.T01:CDS | 35.0% |
| ! | TGTAAACGAAAGAGGGTTTT+GGG | + | Chr8:78088387-78088406 | MsG0880046784.01.T01:CDS | 35.0% |
| !! | CGTGTGTAGTTTGTTATCAT+CGG | + | Chr8:78088249-78088268 | MsG0880046784.01.T01:CDS | 35.0% |
| !! | TCGATATCACTTTTCCACAA+TGG | - | Chr8:78088342-78088361 | None:intergenic | 35.0% |
| AAATGCTACCAATCCATCGT+CGG | - | Chr8:78088557-78088576 | None:intergenic | 40.0% | |
| AAGCTTTACCCTTGACAAGT+CGG | - | Chr8:78088278-78088297 | None:intergenic | 40.0% | |
| AATTCTCCAAAAGAGGGAGA+AGG | - | Chr8:78088884-78088903 | None:intergenic | 40.0% | |
| ATATTCAGACGACTTCCAAG+TGG | + | Chr8:78087638-78087657 | MsG0880046784.01.T01:CDS | 40.0% | |
| ATGCCTGGCCTAATTTCATA+AGG | - | Chr8:78089211-78089230 | None:intergenic | 40.0% | |
| CAAAGAGACATTCATCCGAA+AGG | - | Chr8:78087616-78087635 | None:intergenic | 40.0% | |
| CAACGCAATTGAGTTTCTCA+TGG | + | Chr8:78089271-78089290 | MsG0880046784.01.T01:CDS | 40.0% | |
| CAGATCAACATGCTGAAGTT+GGG | - | Chr8:78088832-78088851 | None:intergenic | 40.0% | |
| CTTGTCAAGGTGAACCTTAA+AGG | + | Chr8:78088915-78088934 | MsG0880046784.01.T01:CDS | 40.0% | |
| GCTTCACAATTCTCCAAAAG+AGG | - | Chr8:78088891-78088910 | None:intergenic | 40.0% | |
| GGTTTGATTGCAATAGCTGA+AGG | + | Chr8:78088091-78088110 | MsG0880046784.01.T01:CDS | 40.0% | |
| GTAACAGATTCACCCAATGT+GGG | + | Chr8:78088620-78088639 | MsG0880046784.01.T01:CDS | 40.0% | |
| GTGATGTTGAACTGCATTCT+GGG | + | Chr8:78087456-78087475 | MsG0880046784.01.T01:CDS | 40.0% | |
| TATTCAATCCCAACAATGCC+TGG | - | Chr8:78089226-78089245 | None:intergenic | 40.0% | |
| TCAGATCAACATGCTGAAGT+TGG | - | Chr8:78088833-78088852 | None:intergenic | 40.0% | |
| TGATGTTGAACTGCATTCTG+GGG | + | Chr8:78087457-78087476 | MsG0880046784.01.T01:CDS | 40.0% | |
| TGTAACAGATTCACCCAATG+TGG | + | Chr8:78088619-78088638 | MsG0880046784.01.T01:CDS | 40.0% | |
| TTACCATTACTTCCTGCGAA+GGG | + | Chr8:78088449-78088468 | MsG0880046784.01.T01:CDS | 40.0% | |
| ! | AAATTAGGCCAGGCATTGTT+GGG | + | Chr8:78089215-78089234 | MsG0880046784.01.T01:CDS | 40.0% |
| ! | AAGCCACCTTTTTGATACAC+AGG | - | Chr8:78087684-78087703 | None:intergenic | 40.0% |
| ! | AGTCAAGTTGTTTCCTCTGA+TGG | - | Chr8:78087897-78087916 | None:intergenic | 40.0% |
| ! | GTGTCTTCCATTGGTGATAA+GGG | + | Chr8:78087992-78088011 | MsG0880046784.01.T01:CDS | 40.0% |
| ! | TCAAGTTGCAGCAACCTTTA+AGG | - | Chr8:78088932-78088951 | None:intergenic | 40.0% |
| ! | TGTGTCTTCCATTGGTGATA+AGG | + | Chr8:78087991-78088010 | MsG0880046784.01.T01:CDS | 40.0% |
| !! | ATATCGAATCTGGCTCTAAG+TGG | + | Chr8:78088355-78088374 | MsG0880046784.01.T01:CDS | 40.0% |
| !! | CTAAATGAGACACTGATTCG+AGG | - | Chr8:78087545-78087564 | None:intergenic | 40.0% |
| !! | CTTTTGGAGAATTGTGAAGC+TGG | + | Chr8:78088891-78088910 | MsG0880046784.01.T01:CDS | 40.0% |
| AATAGTGTACACCCTACTCC+CGG | - | Chr8:78087495-78087514 | None:intergenic | 45.0% | |
| ACACAGACCCTTATCACCAA+TGG | - | Chr8:78088002-78088021 | None:intergenic | 45.0% | |
| AGACGTCTAGATCATTCAGC+AGG | - | Chr8:78089073-78089092 | None:intergenic | 45.0% | |
| AGTGAAAGTGACCTGAGAGA+AGG | - | Chr8:78087965-78087984 | None:intergenic | 45.0% | |
| ATACAACGCAACACCTACGA+AGG | - | Chr8:78088534-78088553 | None:intergenic | 45.0% | |
| ATAGCTTTCCAAGTCCACCA+CGG | - | Chr8:78087874-78087893 | None:intergenic | 45.0% | |
| ATTCGAAACTGCCCTGGTTT+CGG | + | Chr8:78088772-78088791 | MsG0880046784.01.T01:intron | 45.0% | |
| CAGGTGCCTGTGTATCAAAA+AGG | + | Chr8:78087675-78087694 | MsG0880046784.01.T01:CDS | 45.0% | |
| CATCTATGCTTTCACCTTGC+AGG | + | Chr8:78088731-78088750 | MsG0880046784.01.T01:CDS | 45.0% | |
| CTCGAGAGATATTGCAGATC+TGG | - | Chr8:78088581-78088600 | None:intergenic | 45.0% | |
| CTCTCTATGTCTGACTGTTC+TGG | + | Chr8:78089161-78089180 | MsG0880046784.01.T01:CDS | 45.0% | |
| CTGTGGAATGTGTCTTCCAT+TGG | + | Chr8:78087983-78088002 | MsG0880046784.01.T01:CDS | 45.0% | |
| CTTACCATTACTTCCTGCGA+AGG | + | Chr8:78088448-78088467 | MsG0880046784.01.T01:CDS | 45.0% | |
| CTTCAGCATGTTGATCTGAC+TGG | + | Chr8:78088834-78088853 | MsG0880046784.01.T01:intron | 45.0% | |
| CTTGGAAAGCTATCCATCAG+AGG | + | Chr8:78087881-78087900 | MsG0880046784.01.T01:CDS | 45.0% | |
| GAATGCAGTTCAACATCACC+TGG | - | Chr8:78087455-78087474 | None:intergenic | 45.0% | |
| GAGAGTGATGAAGATGCTGA+AGG | + | Chr8:78087767-78087786 | MsG0880046784.01.T01:CDS | 45.0% | |
| GATAACAAACTACACACGCC+AGG | - | Chr8:78088247-78088266 | None:intergenic | 45.0% | |
| GATGAAGATGCTGAAGGTGA+TGG | + | Chr8:78087773-78087792 | MsG0880046784.01.T01:CDS | 45.0% | |
| GATGTTGAACTGCATTCTGG+GGG | + | Chr8:78087458-78087477 | MsG0880046784.01.T01:CDS | 45.0% | |
| GGTCTGTGTGAGATTGCAAA+AGG | + | Chr8:78088013-78088032 | MsG0880046784.01.T01:CDS | 45.0% | |
| GGTGATGTTGAACTGCATTC+TGG | + | Chr8:78087455-78087474 | MsG0880046784.01.T01:CDS | 45.0% | |
| GTGAAAGTGACCTGAGAGAA+GGG | - | Chr8:78087964-78087983 | None:intergenic | 45.0% | |
| GTGCCTGTGTATCAAAAAGG+TGG | + | Chr8:78087678-78087697 | MsG0880046784.01.T01:CDS | 45.0% | |
| GTTACACTCTTCCAACTGCA+AGG | - | Chr8:78088605-78088624 | None:intergenic | 45.0% | |
| TACCATTACTTCCTGCGAAG+GGG | + | Chr8:78088450-78088469 | MsG0880046784.01.T01:CDS | 45.0% | |
| TCTTCGTCGATCACCAACAA+GGG | + | Chr8:78088070-78088089 | MsG0880046784.01.T01:CDS | 45.0% | |
| TGAAGGTCTACAGAAACTGG+TGG | + | Chr8:78088423-78088442 | MsG0880046784.01.T01:CDS | 45.0% | |
| TGGTGAAGGTCTACAGAAAC+TGG | + | Chr8:78088420-78088439 | MsG0880046784.01.T01:CDS | 45.0% | |
| TTCTATGGATACCGGGAGTA+GGG | + | Chr8:78087481-78087500 | MsG0880046784.01.T01:CDS | 45.0% | |
| TTCTTCGTCGATCACCAACA+AGG | + | Chr8:78088069-78088088 | MsG0880046784.01.T01:CDS | 45.0% | |
| TTGTGAAGCTGGACTTGTCA+AGG | + | Chr8:78088902-78088921 | MsG0880046784.01.T01:CDS | 45.0% | |
| ! | AAGGTGATGGCTACCTTACA+AGG | + | Chr8:78087786-78087805 | MsG0880046784.01.T01:CDS | 45.0% |
| ! | ACATAGTTTCTGAGTTGGCC+AGG | + | Chr8:78088958-78088977 | MsG0880046784.01.T01:CDS | 45.0% |
| ! | ACCTTACAAGGCGTTTGGAA+GGG | + | Chr8:78087798-78087817 | MsG0880046784.01.T01:CDS | 45.0% |
| ! | AGAGGAAACAACTTGACTCG+AGG | + | Chr8:78087899-78087918 | MsG0880046784.01.T01:CDS | 45.0% |
| ! | ATCATGGGTTGTCCTCTTGT+TGG | + | Chr8:78088217-78088236 | MsG0880046784.01.T01:CDS | 45.0% |
| ! | GAAATTAGGCCAGGCATTGT+TGG | + | Chr8:78089214-78089233 | MsG0880046784.01.T01:CDS | 45.0% |
| ! | GGCATCGAAAATCCCACATT+GGG | - | Chr8:78088635-78088654 | None:intergenic | 45.0% |
| ! | TACCTTACAAGGCGTTTGGA+AGG | + | Chr8:78087797-78087816 | MsG0880046784.01.T01:CDS | 45.0% |
| !! | GATAAGAGCATCGAAGCCAT+GGG | + | Chr8:78088478-78088497 | MsG0880046784.01.T01:CDS | 45.0% |
| !! | TGATAAGAGCATCGAAGCCA+TGG | + | Chr8:78088477-78088496 | MsG0880046784.01.T01:CDS | 45.0% |
| !! | TGTTGGTGATCGACGAAGAA+TGG | - | Chr8:78088069-78088088 | None:intergenic | 45.0% |
| !!! | AAAGAGGGTTTTGGGTCATG+GGG | + | Chr8:78088395-78088414 | MsG0880046784.01.T01:CDS | 45.0% |
| !!! | GAAAGAGGGTTTTGGGTCAT+GGG | + | Chr8:78088394-78088413 | MsG0880046784.01.T01:CDS | 45.0% |
| AAGTGTGCAATCACCGATGC+AGG | + | Chr8:78089095-78089114 | MsG0880046784.01.T01:CDS | 50.0% | |
| ACAGATCGGAGATACCTGCA+AGG | - | Chr8:78088748-78088767 | None:intergenic | 50.0% | |
| AGCAGCAAGCCTTACATCAG+TGG | - | Chr8:78087831-78087850 | None:intergenic | 50.0% | |
| AGTGGCAAAGAGAGAAGCTC+AGG | + | Chr8:78087656-78087675 | MsG0880046784.01.T01:CDS | 50.0% | |
| ATCTCTCGAGACCTTGCAGT+TGG | + | Chr8:78088591-78088610 | MsG0880046784.01.T01:CDS | 50.0% | |
| ATGATCAGCACGAGCGAGAA+CGG | - | Chr8:78089126-78089145 | None:intergenic | 50.0% | |
| CGTCTAGATCATTCAGCAGG+AGG | - | Chr8:78089070-78089089 | None:intergenic | 50.0% | |
| CGTTGTATCCGACGATGGAT+TGG | + | Chr8:78088546-78088565 | MsG0880046784.01.T01:CDS | 50.0% | |
| CTGGCTGTTATTGGCCATTG+TGG | + | Chr8:78088325-78088344 | MsG0880046784.01.T01:CDS | 50.0% | |
| CTTATCAGTTACCCCTTCGC+AGG | - | Chr8:78088464-78088483 | None:intergenic | 50.0% | |
| CTTTGCCGCATAACAGAAGC+TGG | + | Chr8:78088858-78088877 | MsG0880046784.01.T01:intron | 50.0% | |
| GAAACCAGGGCAGTTTCGAA+TGG | - | Chr8:78088773-78088792 | None:intergenic | 50.0% | |
| GAAGGCCAGCTTCTGTTATG+CGG | - | Chr8:78088866-78088885 | None:intergenic | 50.0% | |
| GAGCTTCTCTCTTTGCCACT+TGG | - | Chr8:78087656-78087675 | None:intergenic | 50.0% | |
| GGAGGAAAGCCACTGATGTA+AGG | + | Chr8:78087819-78087838 | MsG0880046784.01.T01:CDS | 50.0% | |
| GTAACCATTCGAAACTGCCC+TGG | + | Chr8:78088766-78088785 | MsG0880046784.01.T01:CDS | 50.0% | |
| GTTCTATGGATACCGGGAGT+AGG | + | Chr8:78087480-78087499 | MsG0880046784.01.T01:CDS | 50.0% | |
| GTTTGGGAAACCTCTACCCA+TGG | - | Chr8:78088497-78088516 | None:intergenic | 50.0% | |
| TACCCCTTCGCAGGAAGTAA+TGG | - | Chr8:78088455-78088474 | None:intergenic | 50.0% | |
| TCCCTTCCAAACGCCTTGTA+AGG | - | Chr8:78087802-78087821 | None:intergenic | 50.0% | |
| TCCGAAAGGATCTCGATGCT+AGG | - | Chr8:78087602-78087621 | None:intergenic | 50.0% | |
| TCTGGGGGTTCTATGGATAC+CGG | + | Chr8:78087473-78087492 | MsG0880046784.01.T01:CDS | 50.0% | |
| TGAAGCAGATGTGCCTTCGT+AGG | + | Chr8:78088518-78088537 | MsG0880046784.01.T01:CDS | 50.0% | |
| TGTCCTCTTGTTGGAGATCC+TGG | + | Chr8:78088226-78088245 | MsG0880046784.01.T01:CDS | 50.0% | |
| TGTTGCGTTGTATCCGACGA+TGG | + | Chr8:78088541-78088560 | MsG0880046784.01.T01:CDS | 50.0% | |
| ! | ACTGCATTCTGGGGGTTCTA+TGG | + | Chr8:78087466-78087485 | MsG0880046784.01.T01:CDS | 50.0% |
| ! | AGGCACATCTGCTTCAGGTT+TGG | - | Chr8:78088514-78088533 | None:intergenic | 50.0% |
| ! | AGTGCTAGCTTGGCTGTGAT+CGG | + | Chr8:78088796-78088815 | MsG0880046784.01.T01:intron | 50.0% |
| ! | ATCGGCTTCCGACTTGTCAA+GGG | + | Chr8:78088267-78088286 | MsG0880046784.01.T01:CDS | 50.0% |
| ! | CTCTCAGGTCACTTTCACTG+TGG | + | Chr8:78087966-78087985 | MsG0880046784.01.T01:CDS | 50.0% |
| ! | GCCTAGCATCGAGATCCTTT+CGG | + | Chr8:78087598-78087617 | MsG0880046784.01.T01:CDS | 50.0% |
| ! | GGCACATCTGCTTCAGGTTT+GGG | - | Chr8:78088513-78088532 | None:intergenic | 50.0% |
| ! | TACGAAGGCACATCTGCTTC+AGG | - | Chr8:78088519-78088538 | None:intergenic | 50.0% |
| ! | TGGCTACCTTACAAGGCGTT+TGG | + | Chr8:78087793-78087812 | MsG0880046784.01.T01:CDS | 50.0% |
| ! | TTACAAGGCGTTTGGAAGGG+AGG | + | Chr8:78087801-78087820 | MsG0880046784.01.T01:CDS | 50.0% |
| !! | AGGCTTGCTGCTATTGCTGT+TGG | + | Chr8:78087839-78087858 | MsG0880046784.01.T01:CDS | 50.0% |
| !! | GGCTTGCTGCTATTGCTGTT+GGG | + | Chr8:78087840-78087859 | MsG0880046784.01.T01:CDS | 50.0% |
| !! | GGGCATCGAAAATCCCACAT+TGG | - | Chr8:78088636-78088655 | None:intergenic | 50.0% |
| !!! | CGAAAGAGGGTTTTGGGTCA+TGG | + | Chr8:78088393-78088412 | MsG0880046784.01.T01:CDS | 50.0% |
| AAGCTAGCACTGCCGAAACC+AGG | - | Chr8:78088787-78088806 | None:intergenic | 55.0% | |
| ACGCCAGGATCTCCAACAAG+AGG | - | Chr8:78088232-78088251 | None:intergenic | 55.0% | |
| AGCTAGCACTGCCGAAACCA+GGG | - | Chr8:78088786-78088805 | None:intergenic | 55.0% | |
| CTGGGGGTTCTATGGATACC+GGG | + | Chr8:78087474-78087493 | MsG0880046784.01.T01:CDS | 55.0% | |
| GAGAACGGCTATGCCTGCAT+CGG | - | Chr8:78089111-78089130 | None:intergenic | 55.0% | |
| GAGAGTTCCACCATGTAGCC+TGG | - | Chr8:78088979-78088998 | None:intergenic | 55.0% | |
| TGGTTTCGGCAGTGCTAGCT+TGG | + | Chr8:78088786-78088805 | MsG0880046784.01.T01:intron | 55.0% | |
| ! | ACTCGAGGTGTTACAGACCG+CGG | + | Chr8:78087914-78087933 | MsG0880046784.01.T01:CDS | 55.0% |
| ! | AGCATCGAAGCCATGGGTAG+AGG | + | Chr8:78088484-78088503 | MsG0880046784.01.T01:CDS | 55.0% |
| ! | GCTGCTATTGCTGTTGGGAC+TGG | + | Chr8:78087845-78087864 | MsG0880046784.01.T01:CDS | 55.0% |
| ! | GTGCTAGCTTGGCTGTGATC+GGG | + | Chr8:78088797-78088816 | MsG0880046784.01.T01:intron | 55.0% |
| ! | TCTGAGTTGGCCAGGCTACA+TGG | + | Chr8:78088966-78088985 | MsG0880046784.01.T01:CDS | 55.0% |
| !! | CATCGGCTTCCGACTTGTCA+AGG | + | Chr8:78088266-78088285 | MsG0880046784.01.T01:CDS | 55.0% |
| !! | TGGGTCATGGGGTTTGGTGA+AGG | + | Chr8:78088406-78088425 | MsG0880046784.01.T01:CDS | 55.0% |
| !!! | AGCTGGCCTTCTCCCTCTTT+TGG | + | Chr8:78088875-78088894 | MsG0880046784.01.T01:CDS | 55.0% |
| !!! | GGGTTTTGGGTCATGGGGTT+TGG | + | Chr8:78088400-78088419 | MsG0880046784.01.T01:CDS | 55.0% |
| CTCGTGGTTGCCCTTCTCTC+AGG | + | Chr8:78087951-78087970 | MsG0880046784.01.T01:CDS | 60.0% | |
| GAGCAACTGCTGAGAGACCG+CGG | - | Chr8:78087934-78087953 | None:intergenic | 60.0% | |
| GAGTTGGCCAGGCTACATGG+TGG | + | Chr8:78088969-78088988 | MsG0880046784.01.T01:CDS | 60.0% | |
| GGTCTCTCAGCAGTTGCTCG+TGG | + | Chr8:78087935-78087954 | MsG0880046784.01.T01:CDS | 60.0% | |
| !! | ACTGGTTGCCGTGGTGGACT+TGG | + | Chr8:78087863-78087882 | MsG0880046784.01.T01:CDS | 60.0% |
| !! | GCTGTTGGGACTGGTTGCCG+TGG | + | Chr8:78087854-78087873 | MsG0880046784.01.T01:CDS | 65.0% |
| !! | GTTGGGACTGGTTGCCGTGG+TGG | + | Chr8:78087857-78087876 | MsG0880046784.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 78087443 | 78089325 | 78087443 | ID=MsG0880046784.01;Name=MsG0880046784.01 |
| Chr8 | mRNA | 78087443 | 78089325 | 78087443 | ID=MsG0880046784.01.T01;Parent=MsG0880046784.01;Name=MsG0880046784.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|1|1|2|0|598 |
| Chr8 | exon | 78087443 | 78088787 | 78087443 | ID=MsG0880046784.01.T01:exon:18610;Parent=MsG0880046784.01.T01 |
| Chr8 | exon | 78088874 | 78089325 | 78088874 | ID=MsG0880046784.01.T01:exon:18611;Parent=MsG0880046784.01.T01 |
| Chr8 | CDS | 78087443 | 78088787 | 78087443 | ID=MsG0880046784.01.T01:cds;Parent=MsG0880046784.01.T01 |
| Chr8 | CDS | 78088874 | 78089325 | 78088874 | ID=MsG0880046784.01.T01:cds;Parent=MsG0880046784.01.T01 |
| Gene Sequence |
| Protein sequence |
