AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046801.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046801.01.T01 MTR_4g114970 53.333 420 122 13 1 355 1 411 3.21e-98 297
MsG0880046801.01.T01 MTR_4g114970 80.899 178 16 2 159 336 233 392 5.45e-90 278
MsG0880046801.01.T01 MTR_4g114970 86.228 167 20 1 1 167 1 164 9.68e-86 267
MsG0880046801.01.T01 MTR_2g104600 34.524 336 161 10 27 332 27 333 4.58e-54 183
MsG0880046801.01.T01 MTR_2g104600 39.080 174 82 4 159 332 200 349 5.65e-30 119
MsG0880046801.01.T01 MTR_2g104600 32.624 141 59 4 27 167 27 131 8.12e-14 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046801.01.T01 AT2G42160 38.061 423 153 11 1 336 1 401 5.74e-75 237
MsG0880046801.01.T01 AT2G42160 38.061 423 153 12 1 336 1 401 7.52e-73 233
MsG0880046801.01.T01 AT2G42160 53.933 178 63 2 159 336 243 401 3.81e-56 191
MsG0880046801.01.T01 AT2G42160 47.753 178 78 4 1 167 1 174 1.02e-43 157
MsG0880046801.01.T01 AT2G26000 36.782 174 90 3 159 332 236 389 3.05e-29 117
MsG0880046801.01.T01 AT2G26000 32.886 149 89 3 27 167 22 167 3.41e-19 89.0
MsG0880046801.01.T01 AT2G26000 36.782 174 90 3 159 332 236 389 3.05e-29 117
MsG0880046801.01.T01 AT2G26000 32.886 149 89 3 27 167 22 167 3.41e-19 89.0
MsG0880046801.01.T01 AT2G26000 32.886 149 89 3 27 167 22 167 3.87e-19 88.6
MsG0880046801.01.T01 AT2G26000 30.460 174 83 3 159 332 236 371 7.24e-19 87.8

Find 94 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTGCGTTCTGTGAATTT+AGG 0.150005 8:-78395823 None:intergenic
GGTGAGAGAGAATTGGAATT+AGG 0.180412 8:-78395886 None:intergenic
CTCTGCGTTCTGTGAATTTA+GGG 0.219295 8:-78395822 None:intergenic
AAACTTCTTGCCATTGAAAT+AGG 0.232877 8:-78396179 None:intergenic
AGTGAAGATTTAGAAGTTAA+TGG 0.246664 8:+78398757 MsG0880046801.01.T01:CDS
GTGAGAGAGAATTGGAATTA+GGG 0.271739 8:-78395885 None:intergenic
GTGGAGAAGGCTGCAACTTC+TGG 0.280137 8:+78399775 MsG0880046801.01.T01:CDS
CCTTCCTTCCTTCCTTGTGC+AGG 0.309486 8:+78395558 MsG0880046801.01.T01:five_prime_UTR
CTTCCTTGTGCAGGGGTAGT+TGG 0.311545 8:+78395567 MsG0880046801.01.T01:five_prime_UTR
GTGAAGATTTAGAAGTTAAT+GGG 0.313739 8:+78398758 MsG0880046801.01.T01:CDS
TCATCGAAGGAGAAATAATT+AGG 0.314747 8:-78395931 None:intergenic
TGAATTGTGAATGTGGAAAA+TGG 0.329568 8:-78395664 None:intergenic
CTTTATATATAGAGTTCGTT+TGG 0.341353 8:-78395614 None:intergenic
GAGAAGAGGTGAGAGAGAAT+TGG 0.361552 8:-78395893 None:intergenic
CAGAGTTAAAGCAAGCAATA+AGG 0.371293 8:-78399879 None:intergenic
TTATGTCCATCGACTGAATC+AGG 0.387311 8:+78398651 MsG0880046801.01.T01:CDS
ATATAGAGTTCGTTTGGGTT+TGG 0.388436 8:-78395608 None:intergenic
ACAACAAATTTGGGATTATG+TGG 0.392975 8:+78398621 MsG0880046801.01.T01:CDS
TTCATCATCTTCTCTTCATC+AGG 0.396642 8:+78395992 MsG0880046801.01.T01:CDS
CGGAGAAAGAATAACGCGTT+TGG 0.398175 8:-78395690 None:intergenic
AGCAAGCAATAAGGAAATAT+AGG 0.401983 8:-78399870 None:intergenic
CCGTCTTCTTACATCTCAAT+TGG 0.403056 8:+78399368 MsG0880046801.01.T01:CDS
TACCAACATGTCAGTTTGCT+TGG 0.409724 8:+78396869 MsG0880046801.01.T01:CDS
ACTTCTTGCCTCAATTAGTA+AGG 0.414456 8:-78399725 None:intergenic
TTCAACTTTGCTGTTAAAGA+AGG 0.416559 8:-78398782 None:intergenic
GCATTTCATACCTATTTCAA+TGG 0.416711 8:+78396169 MsG0880046801.01.T01:CDS
CTTCCTTCCTTCCTTGTGCA+GGG 0.419541 8:+78395559 MsG0880046801.01.T01:five_prime_UTR
TTTATATATAGAGTTCGTTT+GGG 0.442349 8:-78395613 None:intergenic
GTTCACTGTATGTCTCTAGA+AGG 0.443877 8:+78398712 MsG0880046801.01.T01:CDS
GGAGCGGAGAAGATGAGTTC+GGG 0.448861 8:-78395781 None:intergenic
GAGAGGAGTGTGAAGCGCTT+CGG 0.450487 8:-78395861 None:intergenic
GGCTGCAACTTCTGGCATGC+TGG 0.450669 8:+78399783 MsG0880046801.01.T01:CDS
TGGAGCGGAGAAGATGAGTT+CGG 0.454323 8:-78395782 None:intergenic
GATGAAGACGATCAAGATAG+TGG 0.455616 8:-78395975 None:intergenic
AGAATTGGAATTAGGGAGAG+AGG 0.456750 8:-78395878 None:intergenic
AGACACTTCATTCTGCCCTT+AGG 0.462201 8:+78399907 MsG0880046801.01.T01:CDS
GGAACGATGGGATGGAAGAT+AGG 0.463072 8:+78396104 MsG0880046801.01.T01:intron
CGTCGTCGACTGAGTGGACT+CGG 0.465807 8:-78395744 None:intergenic
TCTCCTTCGATGATTTCATT+CGG 0.467942 8:+78395941 MsG0880046801.01.T01:CDS
GGAGAAAGAATAACGCGTTT+GGG 0.469234 8:-78395689 None:intergenic
TTATGAATCCTTACTAATTG+AGG 0.471285 8:+78399717 MsG0880046801.01.T01:CDS
ACCAACATGTCAGTTTGCTT+GGG 0.473872 8:+78396870 MsG0880046801.01.T01:CDS
TAGAGTTCGTTTGGGTTTGG+CGG 0.476305 8:-78395605 None:intergenic
TTTGATTTGGTAGGAACGAT+GGG 0.480219 8:+78396092 MsG0880046801.01.T01:intron
ACTCGGAATGTGAAGAATGC+TGG 0.482534 8:+78396820 MsG0880046801.01.T01:CDS
ATGAGCTTCCGATTAACCTA+AGG 0.491575 8:-78399923 None:intergenic
CACGTTATACTTACCTCAGC+AGG 0.494523 8:-78396205 None:intergenic
CTCGGAATGTGAAGAATGCT+GGG 0.494729 8:+78396821 MsG0880046801.01.T01:CDS
GGTGACTCGGTTTCTTTGAT+CGG 0.495466 8:-78395710 None:intergenic
AGAGTTCGTTTGGGTTTGGC+GGG 0.511424 8:-78395604 None:intergenic
CTTCTCCACTGCTTCAGATA+CGG 0.513939 8:-78399761 None:intergenic
CAGGATCAATCTAGAATTGA+CGG 0.519347 8:+78398670 MsG0880046801.01.T01:CDS
TTCACTGTATGTCTCTAGAA+GGG 0.522047 8:+78398713 MsG0880046801.01.T01:CDS
TTTGCTTTCCGTGGAATACT+CGG 0.522856 8:+78396803 MsG0880046801.01.T01:CDS
GGTATTTCTGTACAACCAGC+TGG 0.536457 8:-78396850 None:intergenic
AATGCTGGGACTCCTCCAGC+TGG 0.539410 8:+78396835 MsG0880046801.01.T01:CDS
AAATCATACCACAGGTGCAC+AGG 0.540860 8:-78399064 None:intergenic
ATTGATCCTGATTCAGTCGA+TGG 0.544517 8:-78398657 None:intergenic
ATGAAGACGATCAAGATAGT+GGG 0.546605 8:-78395974 None:intergenic
CTTTAACAGCAAAGTTGAAG+CGG 0.546937 8:+78398786 MsG0880046801.01.T01:CDS
ATTTGGTAGGAACGATGGGA+TGG 0.551457 8:+78396096 MsG0880046801.01.T01:intron
TTCACATTCCGAGTATTCCA+CGG 0.553540 8:-78396811 None:intergenic
CGTATCTGAAGCAGTGGAGA+AGG 0.559498 8:+78399762 MsG0880046801.01.T01:CDS
CAACAAATTTGGGATTATGT+GGG 0.563048 8:+78398622 MsG0880046801.01.T01:CDS
TTCTTGGGATTGGGTTGGAG+CGG 0.574169 8:-78395797 None:intergenic
ACCCAAGCAAACTGACATGT+TGG 0.575759 8:-78396871 None:intergenic
TACCCCTGCACAAGGAAGGA+AGG 0.576990 8:-78395562 None:intergenic
GATTCTCGTCGTCGACTGAG+TGG 0.577788 8:-78395750 None:intergenic
TAGAATTGACGGCAAGTCGA+AGG 0.578499 8:+78398681 MsG0880046801.01.T01:CDS
CAACTACCCCTGCACAAGGA+AGG 0.579256 8:-78395566 None:intergenic
TGAGCTTCCGATTAACCTAA+GGG 0.583003 8:-78399922 None:intergenic
AGAAAGAAATGTTGTTGCTG+AGG 0.588529 8:+78399837 MsG0880046801.01.T01:CDS
AAGATGAGTTCGGGATCGAG+TGG 0.588594 8:-78395772 None:intergenic
TTCCTTCCTTCCTTGTGCAG+GGG 0.588686 8:+78395560 MsG0880046801.01.T01:five_prime_UTR
CCTGCACAAGGAAGGAAGGA+AGG 0.600504 8:-78395558 None:intergenic
TTGTGAATGTGGAAAATGGA+AGG 0.607125 8:-78395660 None:intergenic
AAGCTCCGTATCTGAAGCAG+TGG 0.608444 8:+78399756 MsG0880046801.01.T01:CDS
AGCAAACAAAATCATACCAC+AGG 0.612940 8:-78399072 None:intergenic
GTGGACTCGGAGGAAGAACA+TGG 0.613421 8:-78395731 None:intergenic
AACAAAAGCCTGTGCACCTG+TGG 0.622732 8:+78399056 MsG0880046801.01.T01:CDS
ACAGCGAGGATGAAGAGAAG+AGG 0.623767 8:-78395907 None:intergenic
TGAAGATTTAGAAGTTAATG+GGG 0.626069 8:+78398759 MsG0880046801.01.T01:CDS
TTGGGTCTGAATTGTGAATG+TGG 0.629630 8:-78395671 None:intergenic
TCACTGTATGTCTCTAGAAG+GGG 0.634476 8:+78398714 MsG0880046801.01.T01:CDS
CCAATTGAGATGTAAGAAGA+CGG 0.636618 8:-78399368 None:intergenic
AAACCGAATGAAATCATCGA+AGG 0.643428 8:-78395944 None:intergenic
GTTCCAACTACCCCTGCACA+AGG 0.658383 8:-78395570 None:intergenic
GGAGGAAGAACATGGTGACT+CGG 0.658735 8:-78395723 None:intergenic
TGTGAATGTGGAAAATGGAA+GGG 0.670214 8:-78395659 None:intergenic
CCTAAATTCACAGAACGCAG+AGG 0.674835 8:+78395823 MsG0880046801.01.T01:CDS
TGAAGACGATCAAGATAGTG+GGG 0.690985 8:-78395973 None:intergenic
ATTTCTGTACAACCAGCTGG+AGG 0.702761 8:-78396847 None:intergenic
AGAAATAATTAGGAACAGCG+AGG 0.702814 8:-78395921 None:intergenic
CGTCGACTGAGTGGACTCGG+AGG 0.727644 8:-78395741 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAAATCAACAATTA+GGG - Chr8:78396075-78396094 None:intergenic 10.0%
!! ATAATTATGAATATTATCTT+GGG + Chr8:78397450-78397469 MsG0880046801.01.T01:intron 10.0%
!! GAAAAAATATATATAATGAT+TGG + Chr8:78396585-78396604 MsG0880046801.01.T01:intron 10.0%
!! ATAAATTTAAAAAACGACAA+AGG - Chr8:78396703-78396722 None:intergenic 15.0%
!! CAAAATTAAAATCAACAATT+AGG - Chr8:78396076-78396095 None:intergenic 15.0%
!! CATAATTATGAATATTATCT+TGG + Chr8:78397449-78397468 MsG0880046801.01.T01:intron 15.0%
!! CATATAGTTATTCTATAAAT+GGG + Chr8:78399166-78399185 MsG0880046801.01.T01:intron 15.0%
!! CATTTATAGAATAACTATAT+GGG - Chr8:78399167-78399186 None:intergenic 15.0%
!! CCAACTTAAATTAATAATTA+GGG - Chr8:78397979-78397998 None:intergenic 15.0%
!! TATTATTACACTTTAATCTT+TGG + Chr8:78397175-78397194 MsG0880046801.01.T01:intron 15.0%
!! TCATAATACTAAAACAAAAA+TGG - Chr8:78399703-78399722 None:intergenic 15.0%
!! TTTGTTTAACATATTAAGTA+GGG - Chr8:78398445-78398464 None:intergenic 15.0%
!!! ATTATAATGTTAACTTGTTA+AGG - Chr8:78398892-78398911 None:intergenic 15.0%
!!! CATTTTATTGTCATTTATAT+AGG + Chr8:78398471-78398490 MsG0880046801.01.T01:intron 15.0%
!!! CATTTTATTTTCTAAAAAAC+AGG + Chr8:78398023-78398042 MsG0880046801.01.T01:intron 15.0%
!!! CCTAATTATTAATTTAAGTT+GGG + Chr8:78397977-78397996 MsG0880046801.01.T01:intron 15.0%
!!! GAATTTTTTTTTCTTTTTCA+GGG - Chr8:78396336-78396355 None:intergenic 15.0%
!!! TGAATTTTTTTTTCTTTTTC+AGG - Chr8:78396337-78396356 None:intergenic 15.0%
!!! TGTTGATTTTAATTTTGATT+TGG + Chr8:78396079-78396098 MsG0880046801.01.T01:intron 15.0%
!!! TTGTCGTTTTTTAAATTTAT+TGG + Chr8:78396703-78396722 MsG0880046801.01.T01:intron 15.0%
!!! TTTTAATCTAGATATAAAGA+AGG + Chr8:78398541-78398560 MsG0880046801.01.T01:intron 15.0%
!!! TTTTGTTTAACATATTAAGT+AGG - Chr8:78398446-78398465 None:intergenic 15.0%
!! AACTTATGATGTTTATATGT+AGG + Chr8:78398258-78398277 MsG0880046801.01.T01:intron 20.0%
!! AATAGGACTTAAGTAAAAAT+AGG + Chr8:78396468-78396487 MsG0880046801.01.T01:intron 20.0%
!! CCATATAGTTATTCTATAAA+TGG + Chr8:78399165-78399184 MsG0880046801.01.T01:intron 20.0%
!! CCATTTATAGAATAACTATA+TGG - Chr8:78399168-78399187 None:intergenic 20.0%
!! CCCAACTTAAATTAATAATT+AGG - Chr8:78397980-78397999 None:intergenic 20.0%
!! CCCTAATTATTAATTTAAGT+TGG + Chr8:78397976-78397995 MsG0880046801.01.T01:intron 20.0%
!! GAAGTATGTCTAAATAAATT+TGG - Chr8:78397741-78397760 None:intergenic 20.0%
!! TTCAAAAAAGACTTGTATTT+AGG + Chr8:78396640-78396659 MsG0880046801.01.T01:intron 20.0%
!! TTTATATATAGAGTTCGTTT+GGG - Chr8:78395616-78395635 None:intergenic 20.0%
!! TTTATCTTTATACAAGAGTT+TGG - Chr8:78397602-78397621 None:intergenic 20.0%
!!! AAAGGTATAATTGATTATTG+AGG - Chr8:78396685-78396704 None:intergenic 20.0%
!!! ACTAAATGGATTTTAATATC+TGG - Chr8:78397947-78397966 None:intergenic 20.0%
!!! ATTACAGAACTTTTTCAAAA+TGG - Chr8:78396035-78396054 None:intergenic 20.0%
!!! ATTTTAGAACACAACAAATT+TGG + Chr8:78398611-78398630 MsG0880046801.01.T01:CDS 20.0%
!!! ATTTTATGCTGATACTAATT+TGG + Chr8:78399019-78399038 MsG0880046801.01.T01:intron 20.0%
!!! CTCAAATAGTTATTTCAAAT+AGG + Chr8:78396451-78396470 MsG0880046801.01.T01:intron 20.0%
!!! GAGAATATCATAATTTTGTT+TGG + Chr8:78397478-78397497 MsG0880046801.01.T01:intron 20.0%
!!! GATTTTAATTTTGATTTGGT+AGG + Chr8:78396083-78396102 MsG0880046801.01.T01:intron 20.0%
!!! TATTTTCTAAAAAACAGGAA+GGG + Chr8:78398028-78398047 MsG0880046801.01.T01:intron 20.0%
!!! TTATTTTCTAAAAAACAGGA+AGG + Chr8:78398027-78398046 MsG0880046801.01.T01:intron 20.0%
!!! TTTTAGAACACAACAAATTT+GGG + Chr8:78398612-78398631 MsG0880046801.01.T01:CDS 20.0%
!!! TTTTATGCTGATACTAATTT+GGG + Chr8:78399020-78399039 MsG0880046801.01.T01:intron 20.0%
! AAGTGATGTAATTTATAGTG+TGG + Chr8:78399551-78399570 MsG0880046801.01.T01:intron 25.0%
! AGTGAAAAAAATTTCAAGGA+TGG - Chr8:78399422-78399441 None:intergenic 25.0%
! AGTGAAGATTTAGAAGTTAA+TGG + Chr8:78398757-78398776 MsG0880046801.01.T01:CDS 25.0%
! ATAAAGATAAAGATGCAACA+TGG + Chr8:78397611-78397630 MsG0880046801.01.T01:intron 25.0%
! ATTACACTTTAATCTTTGGT+TGG + Chr8:78397179-78397198 MsG0880046801.01.T01:intron 25.0%
! CGGAAAGCAAAAATAAAATA+TGG - Chr8:78396794-78396813 None:intergenic 25.0%
! CTTTATATATAGAGTTCGTT+TGG - Chr8:78395617-78395636 None:intergenic 25.0%
! GTAAACATTAAACTCTATTC+AGG + Chr8:78399461-78399480 MsG0880046801.01.T01:intron 25.0%
! GTGAAGATTTAGAAGTTAAT+GGG + Chr8:78398758-78398777 MsG0880046801.01.T01:CDS 25.0%
! GTGTAATAATATGTCAAAAC+AGG - Chr8:78397166-78397185 None:intergenic 25.0%
! TAAAGATAAAGATGCAACAT+GGG + Chr8:78397612-78397631 MsG0880046801.01.T01:intron 25.0%
! TCAAAAGAAGATGTAATACA+CGG - Chr8:78396265-78396284 None:intergenic 25.0%
! TCAAATGATGATCAAAATGT+AGG + Chr8:78396758-78396777 MsG0880046801.01.T01:intron 25.0%
! TGAAGATTTAGAAGTTAATG+GGG + Chr8:78398759-78398778 MsG0880046801.01.T01:CDS 25.0%
! TTATGAATCCTTACTAATTG+AGG + Chr8:78399717-78399736 MsG0880046801.01.T01:CDS 25.0%
!! ACCTTAACAAGTTTTTAACA+AGG + Chr8:78398862-78398881 MsG0880046801.01.T01:intron 25.0%
!!! ATAGGTATAGTGTTTTGATT+AGG + Chr8:78396122-78396141 MsG0880046801.01.T01:CDS 25.0%
!!! CTTGAAATTTTTTTCACTGT+GGG + Chr8:78399424-78399443 MsG0880046801.01.T01:intron 25.0%
!!! GTTTTTTGTATAAGCTATCT+TGG + Chr8:78396361-78396380 MsG0880046801.01.T01:intron 25.0%
!!! TACACTTTTCTAGTTCATTT+TGG - Chr8:78399813-78399832 None:intergenic 25.0%
!!! TATCAGTTCTTTATTTTCGT+TGG + Chr8:78398398-78398417 MsG0880046801.01.T01:intron 25.0%
!!! TATTTGCTTTTGTTTTGTCA+GGG + Chr8:78398495-78398514 MsG0880046801.01.T01:intron 25.0%
!!! TATTTTATTTTTGCTTTCCG+TGG + Chr8:78396794-78396813 MsG0880046801.01.T01:CDS 25.0%
!!! TTATTTGCTTTTGTTTTGTC+AGG + Chr8:78398494-78398513 MsG0880046801.01.T01:intron 25.0%
!!! TTGAAATTTTTTTCACTGTG+GGG + Chr8:78399425-78399444 MsG0880046801.01.T01:intron 25.0%
AAACTTCTTGCCATTGAAAT+AGG - Chr8:78396182-78396201 None:intergenic 30.0%
AAGAGTTATATTGCCTAACT+AGG + Chr8:78397295-78397314 MsG0880046801.01.T01:intron 30.0%
AGCAAGCAATAAGGAAATAT+AGG - Chr8:78399873-78399892 None:intergenic 30.0%
ATTGAACACATCTATGCAAA+AGG - Chr8:78396539-78396558 None:intergenic 30.0%
CCAAAGTTTAAGAACGTATT+TGG + Chr8:78397409-78397428 MsG0880046801.01.T01:intron 30.0%
CCAAATACGTTCTTAAACTT+TGG - Chr8:78397412-78397431 None:intergenic 30.0%
CCACAGTGAAAAAAATTTCA+AGG - Chr8:78399426-78399445 None:intergenic 30.0%
CGTGGAAATTATTGTATTGA+TGG + Chr8:78398218-78398237 MsG0880046801.01.T01:intron 30.0%
CTCTGTGACTGATTAATTAA+TGG + Chr8:78399318-78399337 MsG0880046801.01.T01:intron 30.0%
GAAAGAGAGATATACGTATA+AGG - Chr8:78396733-78396752 None:intergenic 30.0%
GAAATGAAGCGTATATTTAG+GGG + Chr8:78396607-78396626 MsG0880046801.01.T01:intron 30.0%
GACATACTTCACTTATAGTT+CGG + Chr8:78397751-78397770 MsG0880046801.01.T01:intron 30.0%
GATGTGTAAACATTGTTTCA+TGG + Chr8:78399219-78399238 MsG0880046801.01.T01:intron 30.0%
GCATGTGAAAGAAAAATCAT+CGG - Chr8:78399299-78399318 None:intergenic 30.0%
GCATTTCATACCTATTTCAA+TGG + Chr8:78396169-78396188 MsG0880046801.01.T01:CDS 30.0%
GGAAATGAAGCGTATATTTA+GGG + Chr8:78396606-78396625 MsG0880046801.01.T01:intron 30.0%
GTTTCTTTCACTTATGATGA+AGG + Chr8:78399587-78399606 MsG0880046801.01.T01:intron 30.0%
TAGGGAGAAAATACACTAAA+TGG - Chr8:78397961-78397980 None:intergenic 30.0%
TCATCGAAGGAGAAATAATT+AGG - Chr8:78395934-78395953 None:intergenic 30.0%
TGAATTGTGAATGTGGAAAA+TGG - Chr8:78395667-78395686 None:intergenic 30.0%
TGGAAATGAAGCGTATATTT+AGG + Chr8:78396605-78396624 MsG0880046801.01.T01:intron 30.0%
TGTTCCACAATAAAACAAGT+TGG - Chr8:78398316-78398335 None:intergenic 30.0%
! AAAACAGGTTTTCATGGAAT+GGG - Chr8:78397151-78397170 None:intergenic 30.0%
! ACAACAAATTTGGGATTATG+TGG + Chr8:78398621-78398640 MsG0880046801.01.T01:CDS 30.0%
! CAACAAATTTGGGATTATGT+GGG + Chr8:78398622-78398641 MsG0880046801.01.T01:CDS 30.0%
! CTAGGTTGGAAAAAATTGAT+AGG - Chr8:78397656-78397675 None:intergenic 30.0%
! TATGTCAAAACAGGTTTTCA+TGG - Chr8:78397157-78397176 None:intergenic 30.0%
! TGTATGATTTGTGGATTTGT+CGG + Chr8:78398354-78398373 MsG0880046801.01.T01:intron 30.0%
!! GCCTTGTTAAAAACTTGTTA+AGG - Chr8:78398866-78398885 None:intergenic 30.0%
!! TGTGAATTTAGGGTTTTCTT+GGG - Chr8:78395815-78395834 None:intergenic 30.0%
!! TGTTTGCTGTGTAATTAACA+CGG + Chr8:78399087-78399106 MsG0880046801.01.T01:intron 30.0%
!! TTCAACTTTGCTGTTAAAGA+AGG - Chr8:78398785-78398804 None:intergenic 30.0%
!!! AACAAAAGCACTGGTTTTAT+TGG + Chr8:78398188-78398207 MsG0880046801.01.T01:intron 30.0%
!!! CCTTGAAATTTTTTTCACTG+TGG + Chr8:78399423-78399442 MsG0880046801.01.T01:intron 30.0%
!!! CTATCAATTTTTTCCAACCT+AGG + Chr8:78397654-78397673 MsG0880046801.01.T01:intron 30.0%
AAACCGAATGAAATCATCGA+AGG - Chr8:78395947-78395966 None:intergenic 35.0%
AACGAGTTTGAAAGTTTCTC+AGG + Chr8:78397365-78397384 MsG0880046801.01.T01:intron 35.0%
AAGCTATCTTGGACATCTTA+TGG + Chr8:78396372-78396391 MsG0880046801.01.T01:intron 35.0%
AAGGTAACAACTTCAACACA+TGG + Chr8:78397901-78397920 MsG0880046801.01.T01:intron 35.0%
AATTGCTATGATACTCGCAA+TGG + Chr8:78399619-78399638 MsG0880046801.01.T01:intron 35.0%
ACAACCAAATGTGTGACATT+AGG - Chr8:78399245-78399264 None:intergenic 35.0%
ACCTTTATACCATCCACTTT+GGG - Chr8:78397538-78397557 None:intergenic 35.0%
ACTTCTTGCCTCAATTAGTA+AGG - Chr8:78399728-78399747 None:intergenic 35.0%
AGAAAGAAATGTTGTTGCTG+AGG + Chr8:78399837-78399856 MsG0880046801.01.T01:CDS 35.0%
AGAAATAATTAGGAACAGCG+AGG - Chr8:78395924-78395943 None:intergenic 35.0%
AGCAAACAAAATCATACCAC+AGG - Chr8:78399075-78399094 None:intergenic 35.0%
ATACTTCACTTATAGTTCGG+AGG + Chr8:78397754-78397773 MsG0880046801.01.T01:intron 35.0%
ATGAAGACGATCAAGATAGT+GGG - Chr8:78395977-78395996 None:intergenic 35.0%
ATGAGCTTAATATCCTAGGT+TGG - Chr8:78397670-78397689 None:intergenic 35.0%
ATTGCTATGATACTCGCAAT+GGG + Chr8:78399620-78399639 MsG0880046801.01.T01:intron 35.0%
CAGAGTTAAAGCAAGCAATA+AGG - Chr8:78399882-78399901 None:intergenic 35.0%
CATCCTGTTGTTGACATAAT+CGG - Chr8:78398288-78398307 None:intergenic 35.0%
CCAATTGAGATGTAAGAAGA+CGG - Chr8:78399371-78399390 None:intergenic 35.0%
CCAGAATGCATTGAATTTCT+GGG + Chr8:78397801-78397820 MsG0880046801.01.T01:intron 35.0%
CCAGAATTTGTACTTGCATT+GGG + Chr8:78396237-78396256 MsG0880046801.01.T01:intron 35.0%
CTAACTAGGATATTATCGTG+AGG + Chr8:78397309-78397328 MsG0880046801.01.T01:intron 35.0%
CTCACGATAATATCCTAGTT+AGG - Chr8:78397311-78397330 None:intergenic 35.0%
CTTTAACAGCAAAGTTGAAG+CGG + Chr8:78398786-78398805 MsG0880046801.01.T01:CDS 35.0%
GAGGTAAGTATAACGTGTTT+GGG + Chr8:78396211-78396230 MsG0880046801.01.T01:intron 35.0%
GTGAGAGAGAATTGGAATTA+GGG - Chr8:78395888-78395907 None:intergenic 35.0%
TACCTTTATACCATCCACTT+TGG - Chr8:78397539-78397558 None:intergenic 35.0%
TCACTTATGATGAAGGCTTT+GGG + Chr8:78399594-78399613 MsG0880046801.01.T01:intron 35.0%
TCCAGAATTTGTACTTGCAT+TGG + Chr8:78396236-78396255 MsG0880046801.01.T01:intron 35.0%
TCTCCTTCGATGATTTCATT+CGG + Chr8:78395941-78395960 MsG0880046801.01.T01:CDS 35.0%
TGAGGTAAGTATAACGTGTT+TGG + Chr8:78396210-78396229 MsG0880046801.01.T01:intron 35.0%
TGGAACATTAGATGATGTCT+GGG + Chr8:78398329-78398348 MsG0880046801.01.T01:intron 35.0%
TGGAATGTGCAATGATAAGT+TGG - Chr8:78397927-78397946 None:intergenic 35.0%
TGTCATGTAGACATAGAGAT+AGG + Chr8:78399141-78399160 MsG0880046801.01.T01:intron 35.0%
TGTGAATGTGGAAAATGGAA+GGG - Chr8:78395662-78395681 None:intergenic 35.0%
TTACACTTACGAGACTGTTT+GGG - Chr8:78396426-78396445 None:intergenic 35.0%
TTCACTTATGATGAAGGCTT+TGG + Chr8:78399593-78399612 MsG0880046801.01.T01:intron 35.0%
TTCATCATCTTCTCTTCATC+AGG + Chr8:78395992-78396011 MsG0880046801.01.T01:CDS 35.0%
TTGCATAGATGTGTTCAATC+TGG + Chr8:78396540-78396559 MsG0880046801.01.T01:intron 35.0%
TTGTGAATGTGGAAAATGGA+AGG - Chr8:78395663-78395682 None:intergenic 35.0%
TTTACACTTACGAGACTGTT+TGG - Chr8:78396427-78396446 None:intergenic 35.0%
! AAACAGGTTTTCATGGAATG+GGG - Chr8:78397150-78397169 None:intergenic 35.0%
! AATGCATTGAATTTCTGGGA+AGG + Chr8:78397805-78397824 MsG0880046801.01.T01:intron 35.0%
! ATATAGAGTTCGTTTGGGTT+TGG - Chr8:78395611-78395630 None:intergenic 35.0%
! ATTAGACTCTTAGAGCATCA+TGG + Chr8:78397209-78397228 MsG0880046801.01.T01:intron 35.0%
! CAAAACAGGTTTTCATGGAA+TGG - Chr8:78397152-78397171 None:intergenic 35.0%
! CAATCTGGCTTCTTATCTTA+GGG + Chr8:78396555-78396574 MsG0880046801.01.T01:intron 35.0%
! CAGGATCAATCTAGAATTGA+CGG + Chr8:78398670-78398689 MsG0880046801.01.T01:CDS 35.0%
! GATGATTTCATTCGGTTTTG+TGG + Chr8:78395949-78395968 MsG0880046801.01.T01:CDS 35.0%
! TAATGGACATGAACAGATTG+TGG + Chr8:78399335-78399354 MsG0880046801.01.T01:intron 35.0%
! TCAATCTGGCTTCTTATCTT+AGG + Chr8:78396554-78396573 MsG0880046801.01.T01:intron 35.0%
! TCTGAGGTGATTATGATTGT+GGG + Chr8:78396969-78396988 MsG0880046801.01.T01:intron 35.0%
! TTAGACTCTTAGAGCATCAT+GGG + Chr8:78397210-78397229 MsG0880046801.01.T01:intron 35.0%
! TTCACTGTATGTCTCTAGAA+GGG + Chr8:78398713-78398732 MsG0880046801.01.T01:CDS 35.0%
! TTTCTAAAAAACAGGAAGGG+CGG + Chr8:78398031-78398050 MsG0880046801.01.T01:intron 35.0%
!! AAAAAGCTTCTCTGAAATCG+TGG + Chr8:78398823-78398842 MsG0880046801.01.T01:intron 35.0%
!! ATTTAGGGTTTTCTTGGGAT+TGG - Chr8:78395810-78395829 None:intergenic 35.0%
!! CTGTGAATTTAGGGTTTTCT+TGG - Chr8:78395816-78395835 None:intergenic 35.0%
!! GTTTGCTGTGTAATTAACAC+GGG + Chr8:78399088-78399107 MsG0880046801.01.T01:intron 35.0%
!! TTTAGGGTTTTCTTGGGATT+GGG - Chr8:78395809-78395828 None:intergenic 35.0%
!! TTTGATTTGGTAGGAACGAT+GGG + Chr8:78396092-78396111 MsG0880046801.01.T01:intron 35.0%
!!! ACACTTTTTAAGTCCCAAAG+TGG + Chr8:78397522-78397541 MsG0880046801.01.T01:intron 35.0%
!!! GAAGCCAACTTGTTTTATTG+TGG + Chr8:78398309-78398328 MsG0880046801.01.T01:intron 35.0%
!!! TTTTGATTTGGTAGGAACGA+TGG + Chr8:78396091-78396110 MsG0880046801.01.T01:intron 35.0%
!!! TTTTTAAGTCCCAAAGTGGA+TGG + Chr8:78397526-78397545 MsG0880046801.01.T01:intron 35.0%
AAGGACATGCTATTCAGCAT+TGG + Chr8:78398560-78398579 MsG0880046801.01.T01:intron 40.0%
AAGTTGTTACCTTGACCATG+AGG - Chr8:78397894-78397913 None:intergenic 40.0%
AGAATTGGAATTAGGGAGAG+AGG - Chr8:78395881-78395900 None:intergenic 40.0%
ATGGCCTAATGTCACACATT+TGG + Chr8:78399238-78399257 MsG0880046801.01.T01:intron 40.0%
ATTGATCCTGATTCAGTCGA+TGG - Chr8:78398660-78398679 None:intergenic 40.0%
ATTTGTGGATTTGTCGGATG+TGG + Chr8:78398360-78398379 MsG0880046801.01.T01:intron 40.0%
CAGGGAAGACTTTAATGCTA+TGG + Chr8:78398513-78398532 MsG0880046801.01.T01:intron 40.0%
CCCAATGCAAGTACAAATTC+TGG - Chr8:78396240-78396259 None:intergenic 40.0%
CCCAGAAATTCAATGCATTC+TGG - Chr8:78397804-78397823 None:intergenic 40.0%
CCGTCTTCTTACATCTCAAT+TGG + Chr8:78399368-78399387 MsG0880046801.01.T01:CDS 40.0%
CTATGTCTACATGACAGTAC+AGG - Chr8:78399137-78399156 None:intergenic 40.0%
CTCTGCGTTCTGTGAATTTA+GGG - Chr8:78395825-78395844 None:intergenic 40.0%
CTGAGGTGATTATGATTGTG+GGG + Chr8:78396970-78396989 MsG0880046801.01.T01:intron 40.0%
GATGAAGACGATCAAGATAG+TGG - Chr8:78395978-78395997 None:intergenic 40.0%
GCCAGAATGCATTGAATTTC+TGG + Chr8:78397800-78397819 MsG0880046801.01.T01:intron 40.0%
GCTCATGAGCTTAATATCCT+AGG - Chr8:78397674-78397693 None:intergenic 40.0%
GGAGAAAGAATAACGCGTTT+GGG - Chr8:78395692-78395711 None:intergenic 40.0%
GGTGAGAGAGAATTGGAATT+AGG - Chr8:78395889-78395908 None:intergenic 40.0%
GTCTGGGTTTGTATGATTTG+TGG + Chr8:78398345-78398364 MsG0880046801.01.T01:intron 40.0%
GTGGAACATTAGATGATGTC+TGG + Chr8:78398328-78398347 MsG0880046801.01.T01:intron 40.0%
GTTCACTGTATGTCTCTAGA+AGG + Chr8:78398712-78398731 MsG0880046801.01.T01:CDS 40.0%
TCCCAAAGTGGATGGTATAA+AGG + Chr8:78397534-78397553 MsG0880046801.01.T01:intron 40.0%
TCTCTAAGCTGCAACTAAGT+TGG - Chr8:78396290-78396309 None:intergenic 40.0%
TGAAGACGATCAAGATAGTG+GGG - Chr8:78395976-78395995 None:intergenic 40.0%
TGCGTATTCCACTTGTATCA+GGG - Chr8:78397054-78397073 None:intergenic 40.0%
TGTTTACACATCACGTGTGA+CGG - Chr8:78399211-78399230 None:intergenic 40.0%
TTCACATTCCGAGTATTCCA+CGG - Chr8:78396814-78396833 None:intergenic 40.0%
TTGGGTCTGAATTGTGAATG+TGG - Chr8:78395674-78395693 None:intergenic 40.0%
TTTGCTTTCCGTGGAATACT+CGG + Chr8:78396803-78396822 MsG0880046801.01.T01:CDS 40.0%
! ACCAACATGTCAGTTTGCTT+GGG + Chr8:78396870-78396889 MsG0880046801.01.T01:CDS 40.0%
! CTTAGAGCATCATGGGTATT+AGG + Chr8:78397217-78397236 MsG0880046801.01.T01:intron 40.0%
! TAACACGGGCTTTATGCATA+AGG + Chr8:78399102-78399121 MsG0880046801.01.T01:intron 40.0%
! TACCAACATGTCAGTTTGCT+TGG + Chr8:78396869-78396888 MsG0880046801.01.T01:CDS 40.0%
! TCACTGTATGTCTCTAGAAG+GGG + Chr8:78398714-78398733 MsG0880046801.01.T01:CDS 40.0%
! TTATGTCCATCGACTGAATC+AGG + Chr8:78398651-78398670 MsG0880046801.01.T01:CDS 40.0%
!! CTCTGAGGTGATTATGATTG+TGG + Chr8:78396968-78396987 MsG0880046801.01.T01:intron 40.0%
!! GATTGTGGGGTTGATGTTTA+TGG + Chr8:78396983-78397002 MsG0880046801.01.T01:intron 40.0%
!! TCTCTGAAATCGTGGAGTTA+GGG + Chr8:78398831-78398850 MsG0880046801.01.T01:intron 40.0%
!! TTCTCTGAAATCGTGGAGTT+AGG + Chr8:78398830-78398849 MsG0880046801.01.T01:intron 40.0%
!!! GGTTTTATTGGTAATGCACG+TGG + Chr8:78398200-78398219 MsG0880046801.01.T01:intron 40.0%
AAAGATGCAACATGGGCGAT+GGG + Chr8:78397619-78397638 MsG0880046801.01.T01:intron 45.0%
AAATCATACCACAGGTGCAC+AGG - Chr8:78399067-78399086 None:intergenic 45.0%
ACATGGGCGATGGGAAAAAA+TGG + Chr8:78397628-78397647 MsG0880046801.01.T01:intron 45.0%
ACCAAGATCCAAGCAAACAG+AGG - Chr8:78396922-78396941 None:intergenic 45.0%
ACCCAAGCAAACTGACATGT+TGG - Chr8:78396874-78396893 None:intergenic 45.0%
ACCTCTGTTTGCTTGGATCT+TGG + Chr8:78396918-78396937 MsG0880046801.01.T01:intron 45.0%
ACTCGGAATGTGAAGAATGC+TGG + Chr8:78396820-78396839 MsG0880046801.01.T01:CDS 45.0%
AGACACTTCATTCTGCCCTT+AGG + Chr8:78399907-78399926 MsG0880046801.01.T01:CDS 45.0%
AGCGACAAGCTCACTTTAAG+TGG + Chr8:78398960-78398979 MsG0880046801.01.T01:intron 45.0%
ATTTCTGTACAACCAGCTGG+AGG - Chr8:78396850-78396869 None:intergenic 45.0%
ATTTGGTAGGAACGATGGGA+TGG + Chr8:78396096-78396115 MsG0880046801.01.T01:intron 45.0%
CACGTTATACTTACCTCAGC+AGG - Chr8:78396208-78396227 None:intergenic 45.0%
CCTAAATTCACAGAACGCAG+AGG + Chr8:78395823-78395842 MsG0880046801.01.T01:CDS 45.0%
CCTCTGCGTTCTGTGAATTT+AGG - Chr8:78395826-78395845 None:intergenic 45.0%
CGCTGTCTTCAATTTCTCTG+AGG + Chr8:78396953-78396972 MsG0880046801.01.T01:intron 45.0%
CGGAGAAAGAATAACGCGTT+TGG - Chr8:78395693-78395712 None:intergenic 45.0%
CTCGGAATGTGAAGAATGCT+GGG + Chr8:78396821-78396840 MsG0880046801.01.T01:CDS 45.0%
CTTCTCCACTGCTTCAGATA+CGG - Chr8:78399764-78399783 None:intergenic 45.0%
GAGAAGAGGTGAGAGAGAAT+TGG - Chr8:78395896-78395915 None:intergenic 45.0%
GTCGTGACAGGTATTCGAAT+TGG - Chr8:78397835-78397854 None:intergenic 45.0%
GTGCGTATTCCACTTGTATC+AGG - Chr8:78397055-78397074 None:intergenic 45.0%
GTGGACATATTTGTCTTGCC+AGG + Chr8:78397114-78397133 MsG0880046801.01.T01:intron 45.0%
TAAAGATGCAACATGGGCGA+TGG + Chr8:78397618-78397637 MsG0880046801.01.T01:intron 45.0%
TAGAATTGACGGCAAGTCGA+AGG + Chr8:78398681-78398700 MsG0880046801.01.T01:CDS 45.0%
TGTTACCTTGACCATGAGGA+GGG - Chr8:78397890-78397909 None:intergenic 45.0%
TGTTCAAGTGAAGTCGTGAC+AGG - Chr8:78397847-78397866 None:intergenic 45.0%
TGTTTGAATCCCAGAGAGAC+TGG + Chr8:78397027-78397046 MsG0880046801.01.T01:intron 45.0%
TTGAAGCGGTATGTTTCTCG+TGG + Chr8:78398800-78398819 MsG0880046801.01.T01:intron 45.0%
TTGTTACCTTGACCATGAGG+AGG - Chr8:78397891-78397910 None:intergenic 45.0%
! CAAGAAGTTTTCTCCTGCTG+AGG + Chr8:78396192-78396211 MsG0880046801.01.T01:CDS 45.0%
! CTGCCGATTATGTCAACAAC+AGG + Chr8:78398282-78398301 MsG0880046801.01.T01:intron 45.0%
! GGTATTTCTGTACAACCAGC+TGG - Chr8:78396853-78396872 None:intergenic 45.0%
! TAGAGTTCGTTTGGGTTTGG+CGG - Chr8:78395608-78395627 None:intergenic 45.0%
! TGCTTCGCTAACAAAAGCAC+TGG + Chr8:78398179-78398198 MsG0880046801.01.T01:intron 45.0%
!! ATGTCCACTTTGAGACGCAA+GGG - Chr8:78397102-78397121 None:intergenic 45.0%
!! GGTGACTCGGTTTCTTTGAT+CGG - Chr8:78395713-78395732 None:intergenic 45.0%
!! TATGTCCACTTTGAGACGCA+AGG - Chr8:78397103-78397122 None:intergenic 45.0%
AACAAAAGCCTGTGCACCTG+TGG + Chr8:78399056-78399075 MsG0880046801.01.T01:CDS 50.0%
AAGATGAGTTCGGGATCGAG+TGG - Chr8:78395775-78395794 None:intergenic 50.0%
AATGCCCTTGCGTCTCAAAG+TGG + Chr8:78397095-78397114 MsG0880046801.01.T01:intron 50.0%
ACAGCGAGGATGAAGAGAAG+AGG - Chr8:78395910-78395929 None:intergenic 50.0%
AGACTGGACCCTGATACAAG+TGG + Chr8:78397043-78397062 MsG0880046801.01.T01:intron 50.0%
CATCGTGACCTCTGTTTGCT+TGG + Chr8:78396911-78396930 MsG0880046801.01.T01:intron 50.0%
CTTCCTTCCTTCCTTGTGCA+GGG + Chr8:78395559-78395578 MsG0880046801.01.T01:five_prime_UTR 50.0%
GAATGGGGAAGCTACATACC+TGG - Chr8:78397135-78397154 None:intergenic 50.0%
GGAACGATGGGATGGAAGAT+AGG + Chr8:78396104-78396123 MsG0880046801.01.T01:intron 50.0%
GGAGGAAGAACATGGTGACT+CGG - Chr8:78395726-78395745 None:intergenic 50.0%
GTGGATTTGTCGGATGTGGA+AGG + Chr8:78398364-78398383 MsG0880046801.01.T01:intron 50.0%
GTTACCTTGACCATGAGGAG+GGG - Chr8:78397889-78397908 None:intergenic 50.0%
TATCAGGGTCCAGTCTCTCT+GGG - Chr8:78397039-78397058 None:intergenic 50.0%
TGGAGCGGAGAAGATGAGTT+CGG - Chr8:78395785-78395804 None:intergenic 50.0%
TTACCTTGACCATGAGGAGG+GGG - Chr8:78397888-78397907 None:intergenic 50.0%
TTCCTTCCTTCCTTGTGCAG+GGG + Chr8:78395560-78395579 MsG0880046801.01.T01:five_prime_UTR 50.0%
! AAGCTCCGTATCTGAAGCAG+TGG + Chr8:78399756-78399775 MsG0880046801.01.T01:CDS 50.0%
! AGAGTTCGTTTGGGTTTGGC+GGG - Chr8:78395607-78395626 None:intergenic 50.0%
! CGTATCTGAAGCAGTGGAGA+AGG + Chr8:78399762-78399781 MsG0880046801.01.T01:CDS 50.0%
! GGGTTTTCTTGGGATTGGGT+TGG - Chr8:78395805-78395824 None:intergenic 50.0%
!! GACGCAAGGGCATTGAATGA+TGG - Chr8:78397089-78397108 None:intergenic 50.0%
!! TCAATGCATTCTGGCTCGCT+TGG - Chr8:78397795-78397814 None:intergenic 50.0%
!! TTCTTGGGATTGGGTTGGAG+CGG - Chr8:78395800-78395819 None:intergenic 50.0%
CAACTACCCCTGCACAAGGA+AGG - Chr8:78395569-78395588 None:intergenic 55.0%
CCTGCACAAGGAAGGAAGGA+AGG - Chr8:78395561-78395580 None:intergenic 55.0%
CCTTCCTTCCTTCCTTGTGC+AGG + Chr8:78395558-78395577 MsG0880046801.01.T01:five_prime_UTR 55.0%
CTTCCTTGTGCAGGGGTAGT+TGG + Chr8:78395567-78395586 MsG0880046801.01.T01:five_prime_UTR 55.0%
GGAGCGGAGAAGATGAGTTC+GGG - Chr8:78395784-78395803 None:intergenic 55.0%
GTATCAGGGTCCAGTCTCTC+TGG - Chr8:78397040-78397059 None:intergenic 55.0%
GTGGACTCGGAGGAAGAACA+TGG - Chr8:78395734-78395753 None:intergenic 55.0%
GTGGAGAAGGCTGCAACTTC+TGG + Chr8:78399775-78399794 MsG0880046801.01.T01:CDS 55.0%
GTTCCAACTACCCCTGCACA+AGG - Chr8:78395573-78395592 None:intergenic 55.0%
TACCCCTGCACAAGGAAGGA+AGG - Chr8:78395565-78395584 None:intergenic 55.0%
TACCTTGACCATGAGGAGGG+GGG - Chr8:78397887-78397906 None:intergenic 55.0%
! GAGAGGAGTGTGAAGCGCTT+CGG - Chr8:78395864-78395883 None:intergenic 55.0%
! GATTCTCGTCGTCGACTGAG+TGG - Chr8:78395753-78395772 None:intergenic 55.0%
AATGCTGGGACTCCTCCAGC+TGG + Chr8:78396835-78396854 MsG0880046801.01.T01:CDS 60.0%
GGCTGCAACTTCTGGCATGC+TGG + Chr8:78399783-78399802 MsG0880046801.01.T01:CDS 60.0%
! CGTCGTCGACTGAGTGGACT+CGG - Chr8:78395747-78395766 None:intergenic 60.0%
CACCCCCCTCCTCATGGTCA+AGG + Chr8:78397882-78397901 MsG0880046801.01.T01:intron 65.0%
CCTTTGCACCCCCCTCCTCA+TGG + Chr8:78397876-78397895 MsG0880046801.01.T01:intron 65.0%
! AGGAGGGGGGTGCAAAGGCA+AGG - Chr8:78397874-78397893 None:intergenic 65.0%
! CCATGAGGAGGGGGGTGCAA+AGG - Chr8:78397879-78397898 None:intergenic 65.0%
! CGTCGACTGAGTGGACTCGG+AGG - Chr8:78395744-78395763 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 78395550 78399933 78395550 ID=MsG0880046801.01;Name=MsG0880046801.01
Chr8 mRNA 78395550 78399933 78395550 ID=MsG0880046801.01.T01;Parent=MsG0880046801.01;Name=MsG0880046801.01.T01;_AED=0.35;_eAED=0.39;_QI=183|0.33|0.42|1|0.66|0.57|7|0|355
Chr8 exon 78395550 78396013 78395550 ID=MsG0880046801.01.T01:exon:18724;Parent=MsG0880046801.01.T01
Chr8 exon 78396105 78396224 78396105 ID=MsG0880046801.01.T01:exon:18725;Parent=MsG0880046801.01.T01
Chr8 exon 78396780 78396891 78396780 ID=MsG0880046801.01.T01:exon:18726;Parent=MsG0880046801.01.T01
Chr8 exon 78398577 78398807 78398577 ID=MsG0880046801.01.T01:exon:18727;Parent=MsG0880046801.01.T01
Chr8 exon 78399046 78399096 78399046 ID=MsG0880046801.01.T01:exon:18728;Parent=MsG0880046801.01.T01
Chr8 exon 78399351 78399404 78399351 ID=MsG0880046801.01.T01:exon:18729;Parent=MsG0880046801.01.T01
Chr8 exon 78399715 78399933 78399715 ID=MsG0880046801.01.T01:exon:18730;Parent=MsG0880046801.01.T01
Chr8 five_prime_UTR 78395550 78395732 78395550 ID=MsG0880046801.01.T01:five_prime_utr;Parent=MsG0880046801.01.T01
Chr8 CDS 78395733 78396013 78395733 ID=MsG0880046801.01.T01:cds;Parent=MsG0880046801.01.T01
Chr8 CDS 78396105 78396224 78396105 ID=MsG0880046801.01.T01:cds;Parent=MsG0880046801.01.T01
Chr8 CDS 78396780 78396891 78396780 ID=MsG0880046801.01.T01:cds;Parent=MsG0880046801.01.T01
Chr8 CDS 78398577 78398807 78398577 ID=MsG0880046801.01.T01:cds;Parent=MsG0880046801.01.T01
Chr8 CDS 78399046 78399096 78399046 ID=MsG0880046801.01.T01:cds;Parent=MsG0880046801.01.T01
Chr8 CDS 78399351 78399404 78399351 ID=MsG0880046801.01.T01:cds;Parent=MsG0880046801.01.T01
Chr8 CDS 78399715 78399933 78399715 ID=MsG0880046801.01.T01:cds;Parent=MsG0880046801.01.T01
Gene Sequence

>MsG0880046801.01.T01

ATGTTCTTCCTCCGAGTCCACTCAGTCGACGACGAGAATCCACTCGATCCCGAACTCATCTTCTCCGCTCCAACCCAATCCCAAGAAAACCCTAAATTCACAGAACGCAGAGGCGTTCTTCATCTCTTCCGAAGCGCTTCACACTCCTCTCTCCCTAATTCCAATTCTCTCTCACCTCTTCTCTTCATCCTCGCTGTTCCTAATTATTTCTCCTTCGATGATTTCATTCGGTTTTGTGGTCCCCACTATCTTGATCGTCTTCATCATCTTCTCTTCATCAGGAACGATGGGATGGAAGATAGGTATAGTGTTTTGATTAGGTTTGATGATCAGCTTGCTGCTGATGCATTTCATACCTATTTCAATGGCAAGAAGTTTTCTCCTGCTGAGGTAAGTATAACGCAGAGATATGCCATATTTTATTTTTGCTTTCCGTGGAATACTCGGAATGTGAAGAATGCTGGGACTCCTCCAGCTGGTTGTACAGAAATACCAACATGTCAGTTTGCTTGGCATTGGAAAGATACTCAGCATTGCTATTCTCTTGATTTTAGAACACAACAAATTTGGGATTATGTGGGTGACAATTATGTCCATCGACTGAATCAGGATCAATCTAGAATTGACGGCAAGTCGAAGGAGATGCATGTTCACTGTATGTCTCTAGAAGGGGATTGTGACACATGTGAATGTAGTGAAGATTTAGAAGTTAATGGGGCCTTCTTTAACAGCAAAGTTGAAGCGATTAGTCTGAAACAAAAGCCTGTGCACCTGTGGTATGATTTTGTTTGCTGTATTGTGGATGAATACAACCGTCTTCTTACATCTCAATTGGAGACTCAAAGACAATATTATGAATCCTTACTAATTGAGGCAAGAAGTAAAGAAGAAAGCTCCGTATCTGAAGCAGTGGAGAAGGCTGCAACTTCTGGCATGCTGGATATCCAAAATGAACTAGAAAAGTGTACAGAAGAAAGAAATGTTGTTGCTGAGGTAACTTTTCTCCTATATTTCCTTATTGCTTGCTTTAACTCTGCTATTAGACACTTCATTCTGCCCTTAGGTTAA
Protein sequence

>MsG0880046801.01.T01

MFFLRVHSVDDENPLDPELIFSAPTQSQENPKFTERRGVLHLFRSASHSSLPNSNSLSPLLFILAVPNYFSFDDFIRFCGPHYLDRLHHLLFIRNDGMEDRYSVLIRFDDQLAADAFHTYFNGKKFSPAEVSITQRYAIFYFCFPWNTRNVKNAGTPPAGCTEIPTCQFAWHWKDTQHCYSLDFRTQQIWDYVGDNYVHRLNQDQSRIDGKSKEMHVHCMSLEGDCDTCECSEDLEVNGAFFNSKVEAISLKQKPVHLWYDFVCCIVDEYNRLLTSQLETQRQYYESLLIEARSKEESSVSEAVEKAATSGMLDIQNELEKCTEERNVVAEVTFLLYFLIACFNSAIRHFILPLG*