AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280011446.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011446.01.T01 MTR_2g104600 62.933 375 45 10 18 340 23 355 8.27e-144 414
MsG0280011446.01.T01 MTR_2g104600 63.158 342 82 11 18 340 23 339 1.39e-129 377
MsG0280011446.01.T01 MTR_4g114970 41.034 290 123 8 62 340 142 394 2.23e-59 199
MsG0280011446.01.T01 MTR_4g114970 40.702 285 121 8 62 335 142 389 6.76e-58 193
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280011446.01.T01 AT2G26000 51.890 291 94 6 61 342 144 397 2.13e-87 271
MsG0280011446.01.T01 AT2G26000 51.890 291 94 6 61 342 144 397 2.13e-87 271
MsG0280011446.01.T01 AT2G26000 47.423 291 89 7 61 342 144 379 3.88e-74 236
MsG0280011446.01.T01 AT2G42160 41.096 292 119 7 62 340 152 403 1.16e-63 209
MsG0280011446.01.T01 AT2G42160 41.096 292 119 7 62 340 152 403 1.91e-63 209
MsG0280011446.01.T01 AT2G42160 40.690 290 119 7 62 338 152 401 4.05e-62 204

Find 122 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTGTCAGCTGGGATTTCT+TGG 0.200375 2:+84102499 MsG0280011446.01.T01:intron
TTGTTCTACTTGTTGTAATA+AGG 0.203104 2:-84103450 None:intergenic
ACGTTAGATGTGCAGTATAC+TGG 0.232482 2:+84101679 MsG0280011446.01.T01:intron
CGTTTCTTTCCAGTGTATTA+TGG 0.244965 2:-84102856 None:intergenic
GCGAGTTTCTTTCCGATTCT+AGG 0.247375 2:-84100977 None:intergenic
TGCGGCGAAGTTTAAAAGTT+TGG 0.255359 2:+84100832 None:intergenic
CGATGAGGAGGGGTTTGTTC+GGG 0.266491 2:-84101019 None:intergenic
AACTAACTTCCCATCAGTTT+TGG 0.267305 2:-84102961 None:intergenic
TACATAAGCCTAAGCGAAAA+AGG 0.274652 2:-84101784 None:intergenic
TAACAAAGAGAAGAAGTTTC+TGG 0.277286 2:+84103556 MsG0280011446.01.T01:CDS
AACCTCATGGTTTGTCTTGA+GGG 0.281710 2:+84104300 MsG0280011446.01.T01:three_prime_UTR
ACGCTTAGTTTCCACTTCTA+AGG 0.286554 2:-84102892 None:intergenic
AAGAAAAGCATGGTAGAAAA+AGG 0.322143 2:+84104423 MsG0280011446.01.T01:three_prime_UTR
TCGTCTTGATTCAGATATAA+AGG 0.340162 2:+84102825 MsG0280011446.01.T01:intron
AAGTGGAAACTAAGCGTGTC+TGG 0.346083 2:+84102898 MsG0280011446.01.T01:CDS
GCGGCGAAGTTTAAAAGTTT+GGG 0.358601 2:+84100833 None:intergenic
ATTGCTCCTGTATTTCGAAA+TGG 0.378523 2:+84102305 MsG0280011446.01.T01:CDS
AGTCAACTTGTAGCTCTTAC+TGG 0.378889 2:+84104399 MsG0280011446.01.T01:three_prime_UTR
GAGATGAACATGTTTATAAC+TGG 0.378957 2:+84104837 MsG0280011446.01.T01:three_prime_UTR
AGATTCAGTTTGTTCTTCTT+CGG 0.382285 2:-84100914 None:intergenic
CTCTTCAATCTCAAGTAACT+TGG 0.391711 2:-84103852 None:intergenic
TCATTTCATTAGACTTTGTT+GGG 0.393538 2:+84104448 MsG0280011446.01.T01:three_prime_UTR
TCTCAAACAGCATAAGATTC+AGG 0.394917 2:+84103517 MsG0280011446.01.T01:CDS
TGCAATGTACCAAGGCAAAC+TGG 0.398866 2:-84101757 None:intergenic
ATCATTTCATTAGACTTTGT+TGG 0.402026 2:+84104447 MsG0280011446.01.T01:three_prime_UTR
CTATAACTACTTACATTAGA+AGG 0.407055 2:-84101817 None:intergenic
ATAGGTAAAGGGAAAGGCTT+TGG 0.410410 2:+84104537 MsG0280011446.01.T01:three_prime_UTR
TGTCAAACACTGAGAACCTT+TGG 0.411507 2:+84102652 MsG0280011446.01.T01:CDS
CTTTAAAGCTGACTACTGAT+AGG 0.411800 2:+84104104 MsG0280011446.01.T01:three_prime_UTR
ATCTGCCCATTTCGAAATAC+AGG 0.412417 2:-84102311 None:intergenic
GCGATGAGGAGGGGTTTGTT+CGG 0.414691 2:-84101020 None:intergenic
TGTGTTATATGTGGGTTTGT+TGG 0.419958 2:+84102678 MsG0280011446.01.T01:CDS
TAACCTCATGGTTTGTCTTG+AGG 0.435978 2:+84104299 MsG0280011446.01.T01:three_prime_UTR
TTGCTCCTGTATTTCGAAAT+GGG 0.440003 2:+84102306 MsG0280011446.01.T01:CDS
CGTTAGATGTGCAGTATACT+GGG 0.458930 2:+84101680 MsG0280011446.01.T01:intron
CTTTGGATATGTGTTATATG+TGG 0.462563 2:+84102669 MsG0280011446.01.T01:CDS
TAAAAGTTTGGGAGAAGTGA+TGG 0.469553 2:+84100844 MsG0280011446.01.T01:five_prime_UTR
CGAGTTTCTTTCCGATTCTA+GGG 0.470525 2:-84100976 None:intergenic
ATATGTGGGTTTGTTGGCTG+TGG 0.470616 2:+84102684 MsG0280011446.01.T01:CDS
CTTCTTGGTAACCCTAGAAT+CGG 0.481315 2:+84100965 MsG0280011446.01.T01:CDS
AAACCCCTCCTCATCGCTTC+CGG 0.484421 2:+84101026 MsG0280011446.01.T01:CDS
CATTTGCATTTGACAATGGC+GGG 0.494770 2:-84104341 None:intergenic
TTATAGATGCAAGCTGAGAA+AGG 0.497415 2:+84101834 MsG0280011446.01.T01:CDS
TATAACTGGATCACAGAGTT+GGG 0.500861 2:+84104851 MsG0280011446.01.T01:three_prime_UTR
GTGGGTTTGTTGGCTGTGGA+AGG 0.501678 2:+84102688 MsG0280011446.01.T01:CDS
CTTATTCAGTCCAAAACTGA+TGG 0.502793 2:+84102951 MsG0280011446.01.T01:CDS
ATTAGGTTGGACGGAAACCC+TGG 0.506718 2:+84101126 MsG0280011446.01.T01:intron
CCATTGTCAAATGCAAATGA+TGG 0.510740 2:+84104345 MsG0280011446.01.T01:three_prime_UTR
TACTCTCCCAAACACACGCC+AGG 0.518600 2:-84101144 None:intergenic
TGTAAGTATAACAGTGGTGC+AGG 0.518911 2:-84104708 None:intergenic
CATCTTCTAACACACTGGTT+AGG 0.523276 2:+84104681 MsG0280011446.01.T01:three_prime_UTR
CCATCATTTGCATTTGACAA+TGG 0.524558 2:-84104345 None:intergenic
AGAGAAGAAGTTTCTGGATG+AGG 0.524969 2:+84103562 MsG0280011446.01.T01:CDS
CTGTTCAGTTGAAGTAGCAT+TGG 0.526346 2:-84101725 None:intergenic
TATAGATGCAAGCTGAGAAA+GGG 0.530990 2:+84101835 MsG0280011446.01.T01:CDS
TTCCCTCGAACTAGCAGTGG+TGG 0.531048 2:-84104512 None:intergenic
GCATTGCTATTCCTTAGAAG+TGG 0.532695 2:+84102881 MsG0280011446.01.T01:CDS
TTGTCTTGAGGGTGGGAAGA+CGG 0.545167 2:+84104311 MsG0280011446.01.T01:three_prime_UTR
TCATGGTTTGTCTTGAGGGT+GGG 0.549592 2:+84104304 MsG0280011446.01.T01:three_prime_UTR
TCAGCTGTTGTTGGCAATAG+CGG 0.550312 2:-84102611 None:intergenic
ATGGAAAGAATGATGGCATA+TGG 0.552061 2:-84102284 None:intergenic
AGAGGGACATGAACGAGGTA+AGG 0.552203 2:+84104486 MsG0280011446.01.T01:three_prime_UTR
TTATAACTGGATCACAGAGT+TGG 0.553754 2:+84104850 MsG0280011446.01.T01:three_prime_UTR
AAACCACCACTGCTAGTTCG+AGG 0.555116 2:+84104509 MsG0280011446.01.T01:three_prime_UTR
GTCAACTTGTAGCTCTTACT+GGG 0.556328 2:+84104400 MsG0280011446.01.T01:three_prime_UTR
GGTTACCGGAAGCGATGAGG+AGG 0.558362 2:-84101031 None:intergenic
TTTAAAGCTGACTACTGATA+GGG 0.560293 2:+84104105 MsG0280011446.01.T01:three_prime_UTR
CTCATGGTTTGTCTTGAGGG+TGG 0.560470 2:+84104303 MsG0280011446.01.T01:three_prime_UTR
GGTAACGGACCTAGAAAAGC+AGG 0.564937 2:+84104126 MsG0280011446.01.T01:three_prime_UTR
TCATTTGCATTTGACAATGG+CGG 0.564960 2:-84104342 None:intergenic
TTTGGATATGTGTTATATGT+GGG 0.567381 2:+84102670 MsG0280011446.01.T01:CDS
GTTTGCGAGCATTTAAAACA+AGG 0.575363 2:-84104573 None:intergenic
AGGAGCAATGGAAAGAATGA+TGG 0.576259 2:-84102291 None:intergenic
AGTGGAAACTAAGCGTGTCT+GGG 0.576313 2:+84102899 MsG0280011446.01.T01:CDS
CATGCAGACAGTGGCAGCTG+TGG 0.578082 2:+84103005 MsG0280011446.01.T01:CDS
GACAGCCTTCTGAACTGCTA+CGG 0.578151 2:-84103492 None:intergenic
CCTACATGTCCAGTTTGCCT+TGG 0.578352 2:+84101748 MsG0280011446.01.T01:CDS
ATTTCGAAATACAGGAGCAA+TGG 0.582318 2:-84102303 None:intergenic
AATTTCCGTAGCAGTTCAGA+AGG 0.584911 2:+84103487 MsG0280011446.01.T01:CDS
GCTCGCAAACAAACAAGGAA+TGG 0.585157 2:+84104586 MsG0280011446.01.T01:three_prime_UTR
ATTAAGTATAGCCTCTCTCA+TGG 0.586613 2:-84103036 None:intergenic
TAAATGCTCGCAAACAAACA+AGG 0.588700 2:+84104581 MsG0280011446.01.T01:three_prime_UTR
AAAATCATCTTCTAACACAC+TGG 0.592634 2:+84104676 MsG0280011446.01.T01:three_prime_UTR
ACTTAATAGTAAAGTTGAAG+CGG 0.592740 2:+84103052 MsG0280011446.01.T01:CDS
TGTACAGCTTAGTAACCTCA+TGG 0.595808 2:+84104287 MsG0280011446.01.T01:intron
GATGAGGAGGGGTTTGTTCG+GGG 0.595974 2:-84101018 None:intergenic
TTACCGGAAGCGATGAGGAG+GGG 0.597056 2:-84101029 None:intergenic
GGAGTTCAACGGAAAGGAGA+GGG 0.599127 2:+84104469 MsG0280011446.01.T01:three_prime_UTR
TTGTTGGGAGTTCAACGGAA+AGG 0.599282 2:+84104463 MsG0280011446.01.T01:three_prime_UTR
GTTTATACAAACTAAACTGA+CGG 0.600733 2:+84104732 MsG0280011446.01.T01:three_prime_UTR
AGACTTTGTTGGGAGTTCAA+CGG 0.601974 2:+84104458 MsG0280011446.01.T01:three_prime_UTR
TCAGTTGAAGTAGCATTGGA+TGG 0.603843 2:-84101721 None:intergenic
GTTACCGGAAGCGATGAGGA+GGG 0.603856 2:-84101030 None:intergenic
TGGAGATAATGCCATGAGAG+AGG 0.611254 2:+84103025 MsG0280011446.01.T01:CDS
CACATATAACACATATCCAA+AGG 0.611792 2:-84102668 None:intergenic
AACCACCACTGCTAGTTCGA+GGG 0.616800 2:+84104510 MsG0280011446.01.T01:three_prime_UTR
CTTGATTCAGATATAAAGGA+GGG 0.619034 2:+84102829 MsG0280011446.01.T01:intron
ATACAAACTAAACTGACGGA+TGG 0.619568 2:+84104736 MsG0280011446.01.T01:three_prime_UTR
CCAAGGCAAACTGGACATGT+AGG 0.620789 2:-84101748 None:intergenic
GTTGAGCGCGCGTAGCGATG+TGG 0.621189 2:+84100873 MsG0280011446.01.T01:exon
TTATTCAGTCCAAAACTGAT+GGG 0.621299 2:+84102952 MsG0280011446.01.T01:CDS
AAGCGTGTCTGGGATTATGT+CGG 0.621807 2:+84102909 MsG0280011446.01.T01:CDS
AGAATCGGAAAGAAACTCGC+GGG 0.624066 2:+84100980 MsG0280011446.01.T01:CDS
CACTGTGTGCATGCAGACAG+TGG 0.626099 2:+84102996 MsG0280011446.01.T01:CDS
GAGGGCATGCCATAATACAC+TGG 0.629668 2:+84102847 MsG0280011446.01.T01:CDS
CAAGTAGAACAAGAAACTGA+AGG 0.630137 2:+84103461 MsG0280011446.01.T01:CDS
GGCGGTTACCGGAAGCGATG+AGG 0.630530 2:-84101034 None:intergenic
TCTTACTGGGAAGAAAAGCA+TGG 0.643513 2:+84104413 MsG0280011446.01.T01:three_prime_UTR
GCTGACTACTGATAGGGTAA+CGG 0.644609 2:+84104111 MsG0280011446.01.T01:three_prime_UTR
ACTCTCCCAAACACACGCCA+GGG 0.646303 2:-84101143 None:intergenic
GGGAGTTCAACGGAAAGGAG+AGG 0.649077 2:+84104468 MsG0280011446.01.T01:three_prime_UTR
TCTTGATTCAGATATAAAGG+AGG 0.653143 2:+84102828 MsG0280011446.01.T01:intron
AAGGGACATGCAATGTACCA+AGG 0.675542 2:-84101765 None:intergenic
GTTCGGGGAAGACATGCATG+AGG 0.679806 2:-84101003 None:intergenic
TAAACTTGTAAGTATAACAG+TGG 0.681001 2:-84104714 None:intergenic
TAGAATCGGAAAGAAACTCG+CGG 0.683964 2:+84100979 MsG0280011446.01.T01:CDS
AAAGGAGAGGGACATGAACG+AGG 0.707875 2:+84104481 MsG0280011446.01.T01:three_prime_UTR
AGTTACTTGAGATTGAAGAG+AGG 0.724626 2:+84103855 MsG0280011446.01.T01:exon
TAAGAGCTACAAGTTGACTG+AGG 0.728746 2:-84104395 None:intergenic
CACCCTCAAGACAAACCATG+AGG 0.740508 2:-84104302 None:intergenic
GCGATTAGATCAAGACACGG+TGG 0.748158 2:+84102250 MsG0280011446.01.T01:CDS
AGAGCGATTAGATCAAGACA+CGG 0.762068 2:+84102247 MsG0280011446.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATACTACAATTAAAAAA+AGG - Chr2:84103426-84103445 None:intergenic 10.0%
!! AAATACTACAATTAAAAAAA+GGG - Chr2:84103425-84103444 None:intergenic 10.0%
!! AATGAAAGAATTTAACAAAA+GGG - Chr2:84102736-84102755 None:intergenic 15.0%
!!! ATTTTTTGTTTTTGTGAATT+AGG + Chr2:84101109-84101128 MsG0280011446.01.T01:intron 15.0%
!!! TATAAATACTATTTTGAGAA+CGG - Chr2:84103894-84103913 None:intergenic 15.0%
!!! TGATATACTACTTTTTTTAA+TGG - Chr2:84103735-84103754 None:intergenic 15.0%
!!! TTTGATGTATCTTTTTTTTT+TGG + Chr2:84103116-84103135 MsG0280011446.01.T01:intron 15.0%
!!! TTTTCTCTTTTAATTGTATT+TGG + Chr2:84102771-84102790 MsG0280011446.01.T01:intron 15.0%
!!! TTTTTTTTATCAAGAAACAA+GGG + Chr2:84104619-84104638 MsG0280011446.01.T01:three_prime_UTR 15.0%
!!! TTTTTTTTTATCAAGAAACA+AGG + Chr2:84104618-84104637 MsG0280011446.01.T01:three_prime_UTR 15.0%
!! AAAAAAAGTAGTATATCACA+AGG + Chr2:84103737-84103756 MsG0280011446.01.T01:intron 20.0%
!! AACAGAAAAAAAAATTCAAG+TGG - Chr2:84104782-84104801 None:intergenic 20.0%
!! ACAATTAAAAGAGAAAAGAA+AGG - Chr2:84102768-84102787 None:intergenic 20.0%
!! ATTAATAGTAGTATATCACA+AGG + Chr2:84103699-84103718 MsG0280011446.01.T01:intron 20.0%
!! CAATGAAAGAATTTAACAAA+AGG - Chr2:84102737-84102756 None:intergenic 20.0%
!! TTAGTATGAATATTCTTGAA+CGG - Chr2:84104233-84104252 None:intergenic 20.0%
!! TTTCTTTATACTCATTACAA+TGG + Chr2:84101315-84101334 MsG0280011446.01.T01:intron 20.0%
!!! AAATTCTCCAAAAGTATTAT+AGG - Chr2:84102010-84102029 None:intergenic 20.0%
!!! AATTCTCCAAAAGTATTATA+GGG - Chr2:84102009-84102028 None:intergenic 20.0%
!!! ACTTTTTACATTTAGTTTCA+TGG - Chr2:84103933-84103952 None:intergenic 20.0%
!!! AGTAATTGTTATTATTGTTG+TGG + Chr2:84102097-84102116 MsG0280011446.01.T01:intron 20.0%
!!! CTTTTTACATTTAGTTTCAT+GGG - Chr2:84103932-84103951 None:intergenic 20.0%
!!! GTAATTGTTATTATTGTTGT+GGG + Chr2:84102098-84102117 MsG0280011446.01.T01:intron 20.0%
!!! TAATTGTTATTATTGTTGTG+GGG + Chr2:84102099-84102118 MsG0280011446.01.T01:intron 20.0%
!!! TTTTTTCCCTATAATACTTT+TGG + Chr2:84102000-84102019 MsG0280011446.01.T01:intron 20.0%
! AAAGAATTTAACAAAAGGGT+TGG - Chr2:84102732-84102751 None:intergenic 25.0%
! AAATTGAAATTGAAGATTGG+CGG - Chr2:84101055-84101074 None:intergenic 25.0%
! AAGAATTTAACAAAAGGGTT+GGG - Chr2:84102731-84102750 None:intergenic 25.0%
! AATAATTATAGCCATGTCAT+AGG + Chr2:84103663-84103682 MsG0280011446.01.T01:intron 25.0%
! ACAACTTGAAAACCAAAAAT+TGG + Chr2:84103323-84103342 MsG0280011446.01.T01:CDS 25.0%
! ACTTAATAGTAAAGTTGAAG+CGG + Chr2:84103052-84103071 MsG0280011446.01.T01:CDS 25.0%
! ATCATTTCATTAGACTTTGT+TGG + Chr2:84104447-84104466 MsG0280011446.01.T01:three_prime_UTR 25.0%
! ATGAGAAGATGATGTTATAT+AGG + Chr2:84102382-84102401 MsG0280011446.01.T01:intron 25.0%
! ATTCAAGCATATTCTTGAAA+TGG + Chr2:84101215-84101234 MsG0280011446.01.T01:intron 25.0%
! CTATAACTACTTACATTAGA+AGG - Chr2:84101820-84101839 None:intergenic 25.0%
! GAATAAGAAGAAGATTGAAT+TGG - Chr2:84101079-84101098 None:intergenic 25.0%
! GGAAAATTGAAATTGAAGAT+TGG - Chr2:84101058-84101077 None:intergenic 25.0%
! GTTTATACAAACTAAACTGA+CGG + Chr2:84104732-84104751 MsG0280011446.01.T01:three_prime_UTR 25.0%
! TAAACTTGTAAGTATAACAG+TGG - Chr2:84104717-84104736 None:intergenic 25.0%
! TATATCACTTCTTGTCTAAA+TGG + Chr2:84101424-84101443 MsG0280011446.01.T01:intron 25.0%
! TCATTTCATTAGACTTTGTT+GGG + Chr2:84104448-84104467 MsG0280011446.01.T01:three_prime_UTR 25.0%
! TGAGAAGATGATGTTATATA+GGG + Chr2:84102383-84102402 MsG0280011446.01.T01:intron 25.0%
! TTGACAATCTGTAAAGAAAA+TGG - Chr2:84103279-84103298 None:intergenic 25.0%
! TTTGGATATGTGTTATATGT+GGG + Chr2:84102670-84102689 MsG0280011446.01.T01:CDS 25.0%
!! TATTCTTTTTGACAAAGACA+TGG - Chr2:84103644-84103663 None:intergenic 25.0%
!! TTCTTTTCAATTTCTCTTCT+TGG + Chr2:84100950-84100969 MsG0280011446.01.T01:CDS 25.0%
!! TTCTTTTTGAATCAGTCTAT+TGG + Chr2:84102541-84102560 MsG0280011446.01.T01:intron 25.0%
!!! GTATCTTTTTTTTTTGGTAG+TGG + Chr2:84103122-84103141 MsG0280011446.01.T01:intron 25.0%
!!! TTCTTTCGTATTTTTAATCC+TGG + Chr2:84104168-84104187 MsG0280011446.01.T01:intron 25.0%
!!! TTGTTCTACTTGTTGTAATA+AGG - Chr2:84103453-84103472 None:intergenic 25.0%
!!! TTTGTTTTTGTGAATTAGGT+TGG + Chr2:84101113-84101132 MsG0280011446.01.T01:intron 25.0%
AAAATCATCTTCTAACACAC+TGG + Chr2:84104676-84104695 MsG0280011446.01.T01:three_prime_UTR 30.0%
ACAAAGACATGGTTATAACT+TGG - Chr2:84103633-84103652 None:intergenic 30.0%
ACCAAATCAAATGACTTATG+CGG + Chr2:84101166-84101185 MsG0280011446.01.T01:intron 30.0%
AGAATTTAACAAAAGGGTTG+GGG - Chr2:84102730-84102749 None:intergenic 30.0%
AGCATATGACAATTACAAAG+TGG - Chr2:84103996-84104015 None:intergenic 30.0%
ATACCTGAAAATATAAGCAG+GGG - Chr2:84102590-84102609 None:intergenic 30.0%
CACATATAACACATATCCAA+AGG - Chr2:84102671-84102690 None:intergenic 30.0%
CATACCTGAAAATATAAGCA+GGG - Chr2:84102591-84102610 None:intergenic 30.0%
CTTGATTCAGATATAAAGGA+GGG + Chr2:84102829-84102848 MsG0280011446.01.T01:intron 30.0%
CTTTAATGTTTATACCAGAC+AGG - Chr2:84103395-84103414 None:intergenic 30.0%
CTTTGGATATGTGTTATATG+TGG + Chr2:84102669-84102688 MsG0280011446.01.T01:CDS 30.0%
GACAATGCATAAAATATGCA+AGG - Chr2:84103166-84103185 None:intergenic 30.0%
GAGATGAACATGTTTATAAC+TGG + Chr2:84104837-84104856 MsG0280011446.01.T01:three_prime_UTR 30.0%
GATATACTGCAAATGACAAA+TGG - Chr2:84103359-84103378 None:intergenic 30.0%
TAACAAAGAGAAGAAGTTTC+TGG + Chr2:84103556-84103575 MsG0280011446.01.T01:CDS 30.0%
TCGTCTTGATTCAGATATAA+AGG + Chr2:84102825-84102844 MsG0280011446.01.T01:intron 30.0%
TCTTGAAGTAATTGCAAATC+TGG + Chr2:84104029-84104048 MsG0280011446.01.T01:intron 30.0%
TCTTGATTCAGATATAAAGG+AGG + Chr2:84102828-84102847 MsG0280011446.01.T01:intron 30.0%
TTATGATTGTGTTGCATGTA+TGG + Chr2:84102132-84102151 MsG0280011446.01.T01:intron 30.0%
TTATTCAGTCCAAAACTGAT+GGG + Chr2:84102952-84102971 MsG0280011446.01.T01:CDS 30.0%
TTCGATGAACAAGATTTCTA+CGG + Chr2:84101288-84101307 MsG0280011446.01.T01:intron 30.0%
TTGCAATTACTTCAAGACAT+GGG - Chr2:84104026-84104045 None:intergenic 30.0%
TTTGAGAACAAATCAAACAG+TGG - Chr2:84104266-84104285 None:intergenic 30.0%
TTTGCAATTACTTCAAGACA+TGG - Chr2:84104027-84104046 None:intergenic 30.0%
! AAGAAAAGCATGGTAGAAAA+AGG + Chr2:84104423-84104442 MsG0280011446.01.T01:three_prime_UTR 30.0%
! AGATTCAGTTTGTTCTTCTT+CGG - Chr2:84100917-84100936 None:intergenic 30.0%
! ATAGAATTTTCAGCTGTTGT+TGG - Chr2:84102623-84102642 None:intergenic 30.0%
! GTGTGTTAGAAGATGATTTT+AGG - Chr2:84104676-84104695 None:intergenic 30.0%
! TTATTTACCAACTTGCTCTT+AGG + Chr2:84102028-84102047 MsG0280011446.01.T01:intron 30.0%
! TTGAATGTCGTTGACTAATT+TGG - Chr2:84101472-84101491 None:intergenic 30.0%
! TTTAAAGCTGACTACTGATA+GGG + Chr2:84104105-84104124 MsG0280011446.01.T01:three_prime_UTR 30.0%
! TTTTGGACTGAATAAGTCTA+TGG - Chr2:84102947-84102966 None:intergenic 30.0%
!! ATGACAATCTTTTGAAAACG+AGG + Chr2:84103818-84103837 MsG0280011446.01.T01:CDS 30.0%
!! ATTCTGAAGTGACTATTCAT+TGG + Chr2:84102158-84102177 MsG0280011446.01.T01:intron 30.0%
!! CTTGAAATGGATTGTTAGAA+TGG + Chr2:84101228-84101247 MsG0280011446.01.T01:intron 30.0%
!! GTGTTTGATTTGATGCATAT+AGG + Chr2:84101634-84101653 MsG0280011446.01.T01:intron 30.0%
!! TCGTATTTTTAATCCTGGAA+GGG + Chr2:84104173-84104192 MsG0280011446.01.T01:intron 30.0%
!! TTCGTATTTTTAATCCTGGA+AGG + Chr2:84104172-84104191 MsG0280011446.01.T01:intron 30.0%
!!! TACTTTTTTCAGGGAGAAAA+AGG + Chr2:84104081-84104100 MsG0280011446.01.T01:intron 30.0%
!!! TTTTTGTGAATTAGGTTGGA+CGG + Chr2:84101117-84101136 MsG0280011446.01.T01:intron 30.0%
AATACTACCTAAGAGCAAGT+TGG - Chr2:84102038-84102057 None:intergenic 35.0%
ACATAAGCCTAAGCGAAAAA+GGG - Chr2:84101786-84101805 None:intergenic 35.0%
ACATCTAACGTGAAACAACA+CGG - Chr2:84101670-84101689 None:intergenic 35.0%
ACTGTACTATGTGACTACTA+TGG + Chr2:84102432-84102451 MsG0280011446.01.T01:intron 35.0%
AGAACTCCAGATGATACATA+TGG - Chr2:84102803-84102822 None:intergenic 35.0%
AGATTCTTCTTGTCCTGTAA+GGG + Chr2:84102330-84102349 MsG0280011446.01.T01:intron 35.0%
AGTTACTTGAGATTGAAGAG+AGG + Chr2:84103855-84103874 MsG0280011446.01.T01:exon 35.0%
ATACAAACTAAACTGACGGA+TGG + Chr2:84104736-84104755 MsG0280011446.01.T01:three_prime_UTR 35.0%
ATCATCTTCTCATGCATACA+TGG - Chr2:84102375-84102394 None:intergenic 35.0%
ATGCATACATGGAAAAACAG+AGG - Chr2:84102364-84102383 None:intergenic 35.0%
ATGGAAAGAATGATGGCATA+TGG - Chr2:84102287-84102306 None:intergenic 35.0%
ATTAAGTATAGCCTCTCTCA+TGG - Chr2:84103039-84103058 None:intergenic 35.0%
ATTGCTCCTGTATTTCGAAA+TGG + Chr2:84102305-84102324 MsG0280011446.01.T01:CDS 35.0%
ATTTCGAAATACAGGAGCAA+TGG - Chr2:84102306-84102325 None:intergenic 35.0%
CAAGTAGAACAAGAAACTGA+AGG + Chr2:84103461-84103480 MsG0280011446.01.T01:CDS 35.0%
CCACTCATGAAATTTGCAAT+AGG - Chr2:84101511-84101530 None:intergenic 35.0%
CCATCATTTGCATTTGACAA+TGG - Chr2:84104348-84104367 None:intergenic 35.0%
CCATTGTCAAATGCAAATGA+TGG + Chr2:84104345-84104364 MsG0280011446.01.T01:three_prime_UTR 35.0%
CCTATTGCAAATTTCATGAG+TGG + Chr2:84101508-84101527 MsG0280011446.01.T01:intron 35.0%
CGTTTCTTTCCAGTGTATTA+TGG - Chr2:84102859-84102878 None:intergenic 35.0%
CTCTTCAATCTCAAGTAACT+TGG - Chr2:84103855-84103874 None:intergenic 35.0%
CTGTACTATGTGACTACTAT+GGG + Chr2:84102433-84102452 MsG0280011446.01.T01:intron 35.0%
CTTATTCAGTCCAAAACTGA+TGG + Chr2:84102951-84102970 MsG0280011446.01.T01:CDS 35.0%
GAACAAATCAAACAGTGGTT+TGG - Chr2:84104261-84104280 None:intergenic 35.0%
GAACACAAAATCCTATGACA+TGG - Chr2:84103677-84103696 None:intergenic 35.0%
GAATTTAACAAAAGGGTTGG+GGG - Chr2:84102729-84102748 None:intergenic 35.0%
GATTGTTAGAATGGAATCCA+TGG + Chr2:84101237-84101256 MsG0280011446.01.T01:intron 35.0%
GATTTGATGCATATAGGTTG+AGG + Chr2:84101640-84101659 MsG0280011446.01.T01:intron 35.0%
GCATACCTGAAAATATAAGC+AGG - Chr2:84102592-84102611 None:intergenic 35.0%
GGAAAAATAGGTAAAGGGAA+AGG + Chr2:84104531-84104550 MsG0280011446.01.T01:three_prime_UTR 35.0%
GTAAGTTGTAAGTCATGCTT+GGG + Chr2:84103584-84103603 MsG0280011446.01.T01:intron 35.0%
GTTTATACTTACTGTCAGCT+GGG + Chr2:84102490-84102509 MsG0280011446.01.T01:intron 35.0%
TAAAAGTTTGGGAGAAGTGA+TGG + Chr2:84100844-84100863 MsG0280011446.01.T01:five_prime_UTR 35.0%
TAAATGCTCGCAAACAAACA+AGG + Chr2:84104581-84104600 MsG0280011446.01.T01:three_prime_UTR 35.0%
TAATGTTTATACCAGACAGG+AGG - Chr2:84103392-84103411 None:intergenic 35.0%
TACATAAGCCTAAGCGAAAA+AGG - Chr2:84101787-84101806 None:intergenic 35.0%
TATAACTGGATCACAGAGTT+GGG + Chr2:84104851-84104870 MsG0280011446.01.T01:three_prime_UTR 35.0%
TATAGATGCAAGCTGAGAAA+GGG + Chr2:84101835-84101854 MsG0280011446.01.T01:CDS 35.0%
TCATTTGCATTTGACAATGG+CGG - Chr2:84104345-84104364 None:intergenic 35.0%
TCCGCATAAGTCATTTGATT+TGG - Chr2:84101170-84101189 None:intergenic 35.0%
TCGAGGGAAAAATAGGTAAA+GGG + Chr2:84104526-84104545 MsG0280011446.01.T01:three_prime_UTR 35.0%
TCTCAAACAGCATAAGATTC+AGG + Chr2:84103517-84103536 MsG0280011446.01.T01:CDS 35.0%
TGACAAGACAATGAGTTCTT+TGG - Chr2:84101973-84101992 None:intergenic 35.0%
TGCAATAGGCAAAAGAAACA+TGG - Chr2:84101497-84101516 None:intergenic 35.0%
TGCATAAAATATGCAAGGTC+CGG - Chr2:84103161-84103180 None:intergenic 35.0%
TGTACTATGTGACTACTATG+GGG + Chr2:84102434-84102453 MsG0280011446.01.T01:intron 35.0%
TGTGTTATATGTGGGTTTGT+TGG + Chr2:84102678-84102697 MsG0280011446.01.T01:CDS 35.0%
TGTTTATACTTACTGTCAGC+TGG + Chr2:84102489-84102508 MsG0280011446.01.T01:intron 35.0%
TTATAACTGGATCACAGAGT+TGG + Chr2:84104850-84104869 MsG0280011446.01.T01:three_prime_UTR 35.0%
TTATAGATGCAAGCTGAGAA+AGG + Chr2:84101834-84101853 MsG0280011446.01.T01:CDS 35.0%
TTCGAGGGAAAAATAGGTAA+AGG + Chr2:84104525-84104544 MsG0280011446.01.T01:three_prime_UTR 35.0%
TTGCAACCATATGTATCATC+TGG + Chr2:84102794-84102813 MsG0280011446.01.T01:intron 35.0%
TTGCTCCTGTATTTCGAAAT+GGG + Chr2:84102306-84102325 MsG0280011446.01.T01:CDS 35.0%
! AACTAACTTCCCATCAGTTT+TGG - Chr2:84102964-84102983 None:intergenic 35.0%
! AATGTCGACCCTACAATTTT+AGG + Chr2:84101533-84101552 MsG0280011446.01.T01:intron 35.0%
! ACATTTAGTTTCATGGGACA+AGG - Chr2:84103926-84103945 None:intergenic 35.0%
! ATGTCGACCCTACAATTTTA+GGG + Chr2:84101534-84101553 MsG0280011446.01.T01:intron 35.0%
! GGAATACACTCACCAATTTT+TGG - Chr2:84103338-84103357 None:intergenic 35.0%
! GTTTGCGAGCATTTAAAACA+AGG - Chr2:84104576-84104595 None:intergenic 35.0%
!! ATTTTAGGAGCAGAAGAGAA+AGG - Chr2:84104661-84104680 None:intergenic 35.0%
!! CGTATTTTTAATCCTGGAAG+GGG + Chr2:84104174-84104193 MsG0280011446.01.T01:intron 35.0%
!! CTTTAAAGCTGACTACTGAT+AGG + Chr2:84104104-84104123 MsG0280011446.01.T01:three_prime_UTR 35.0%
!!! ATGGGTGATGTACTTTTTTC+AGG + Chr2:84104071-84104090 MsG0280011446.01.T01:intron 35.0%
!!! CTTTTTTTTTTGGTAGTGGC+CGG + Chr2:84103126-84103145 MsG0280011446.01.T01:intron 35.0%
!!! TGGGTGATGTACTTTTTTCA+GGG + Chr2:84104072-84104091 MsG0280011446.01.T01:intron 35.0%
!!! TTTTTTTTTTGGTAGTGGCC+GGG + Chr2:84103127-84103146 MsG0280011446.01.T01:intron 35.0%
AATTGAAGATTGGCGGTTAC+CGG - Chr2:84101048-84101067 None:intergenic 40.0%
AATTTCCGTAGCAGTTCAGA+AGG + Chr2:84103487-84103506 MsG0280011446.01.T01:CDS 40.0%
ACCATTCCCCCTAAAATTGT+AGG - Chr2:84101545-84101564 None:intergenic 40.0%
ACGCTTAGTTTCCACTTCTA+AGG - Chr2:84102895-84102914 None:intergenic 40.0%
ACGTTAGATGTGCAGTATAC+TGG + Chr2:84101679-84101698 MsG0280011446.01.T01:intron 40.0%
AGACTTTGTTGGGAGTTCAA+CGG + Chr2:84104458-84104477 MsG0280011446.01.T01:three_prime_UTR 40.0%
AGAGCGATTAGATCAAGACA+CGG + Chr2:84102247-84102266 MsG0280011446.01.T01:intron 40.0%
AGGAGCAATGGAAAGAATGA+TGG - Chr2:84102294-84102313 None:intergenic 40.0%
AGTCAACTTGTAGCTCTTAC+TGG + Chr2:84104399-84104418 MsG0280011446.01.T01:three_prime_UTR 40.0%
ATACCAGACAGGAGGAAATT+TGG - Chr2:84103384-84103403 None:intergenic 40.0%
ATAGGTAAAGGGAAAGGCTT+TGG + Chr2:84104537-84104556 MsG0280011446.01.T01:three_prime_UTR 40.0%
ATCTGCCCATTTCGAAATAC+AGG - Chr2:84102314-84102333 None:intergenic 40.0%
ATGTGACTACTATGGGGATT+GGG + Chr2:84102440-84102459 MsG0280011446.01.T01:intron 40.0%
CACTGTAAAACACATCTCCA+TGG - Chr2:84101257-84101276 None:intergenic 40.0%
CAGATTCTTCTTGTCCTGTA+AGG + Chr2:84102329-84102348 MsG0280011446.01.T01:intron 40.0%
CATAAAATATGCAAGGTCCG+GGG - Chr2:84103159-84103178 None:intergenic 40.0%
CATTTGCATTTGACAATGGC+GGG - Chr2:84104344-84104363 None:intergenic 40.0%
CCAGATGTTTGCAAACTGAT+GGG + Chr2:84104053-84104072 MsG0280011446.01.T01:intron 40.0%
CCATTCCCCCTAAAATTGTA+GGG - Chr2:84101544-84101563 None:intergenic 40.0%
CGAGTTTCTTTCCGATTCTA+GGG - Chr2:84100979-84100998 None:intergenic 40.0%
CGTTAGATGTGCAGTATACT+GGG + Chr2:84101680-84101699 MsG0280011446.01.T01:intron 40.0%
CTGTTCAGTTGAAGTAGCAT+TGG - Chr2:84101728-84101747 None:intergenic 40.0%
GCATAAAATATGCAAGGTCC+GGG - Chr2:84103160-84103179 None:intergenic 40.0%
GGTAAGTTGTAAGTCATGCT+TGG + Chr2:84103583-84103602 MsG0280011446.01.T01:intron 40.0%
GGTCCTTACAAGTTAACAGA+TGG + Chr2:84101445-84101464 MsG0280011446.01.T01:intron 40.0%
GTCAACTTGTAGCTCTTACT+GGG + Chr2:84104400-84104419 MsG0280011446.01.T01:three_prime_UTR 40.0%
TAGAATCGGAAAGAAACTCG+CGG + Chr2:84100979-84100998 MsG0280011446.01.T01:CDS 40.0%
TATGTGACTACTATGGGGAT+TGG + Chr2:84102439-84102458 MsG0280011446.01.T01:intron 40.0%
TCCAGATGTTTGCAAACTGA+TGG + Chr2:84104052-84104071 MsG0280011446.01.T01:intron 40.0%
TCTTACTGGGAAGAAAAGCA+TGG + Chr2:84104413-84104432 MsG0280011446.01.T01:three_prime_UTR 40.0%
TGCTAGTTCGAGGGAAAAAT+AGG + Chr2:84104519-84104538 MsG0280011446.01.T01:three_prime_UTR 40.0%
TGTAAGTATAACAGTGGTGC+AGG - Chr2:84104711-84104730 None:intergenic 40.0%
TGTACAGCTTAGTAACCTCA+TGG + Chr2:84104287-84104306 MsG0280011446.01.T01:intron 40.0%
TGTCAAACACTGAGAACCTT+TGG + Chr2:84102652-84102671 MsG0280011446.01.T01:CDS 40.0%
TTACAGTCAGCTATTGCTCT+CGG - Chr2:84102413-84102432 None:intergenic 40.0%
! AACCTCATGGTTTGTCTTGA+GGG + Chr2:84104300-84104319 MsG0280011446.01.T01:three_prime_UTR 40.0%
! AGAGAAGAAGTTTCTGGATG+AGG + Chr2:84103562-84103581 MsG0280011446.01.T01:CDS 40.0%
! AGTCCCCTGCTTATATTTTC+AGG + Chr2:84102584-84102603 MsG0280011446.01.T01:intron 40.0%
! CATCTTCTAACACACTGGTT+AGG + Chr2:84104681-84104700 MsG0280011446.01.T01:three_prime_UTR 40.0%
! CTTCTTGGTAACCCTAGAAT+CGG + Chr2:84100965-84100984 MsG0280011446.01.T01:CDS 40.0%
! GCATTGCTATTCCTTAGAAG+TGG + Chr2:84102881-84102900 MsG0280011446.01.T01:CDS 40.0%
! GCGGATTTTTGTCAGTTTTG+TGG + Chr2:84101185-84101204 MsG0280011446.01.T01:intron 40.0%
! TAACCTCATGGTTTGTCTTG+AGG + Chr2:84104299-84104318 MsG0280011446.01.T01:three_prime_UTR 40.0%
! TAAGAGCTACAAGTTGACTG+AGG - Chr2:84104398-84104417 None:intergenic 40.0%
! TCAGTTGAAGTAGCATTGGA+TGG - Chr2:84101724-84101743 None:intergenic 40.0%
! TGTCGACCCTACAATTTTAG+GGG + Chr2:84101535-84101554 MsG0280011446.01.T01:intron 40.0%
!! CAGTATTCACCTGCTTTTCT+AGG - Chr2:84104138-84104157 None:intergenic 40.0%
!! CTTTTGAAAACGAGGAGATC+TGG + Chr2:84103826-84103845 MsG0280011446.01.T01:CDS 40.0%
!! GGTCCATCTGTTAACTTGTA+AGG - Chr2:84101451-84101470 None:intergenic 40.0%
!! TACAATTTTAGGGGGAATGG+TGG + Chr2:84101544-84101563 MsG0280011446.01.T01:intron 40.0%
!!! TTTTTTTTTGGTAGTGGCCG+GGG + Chr2:84103128-84103147 MsG0280011446.01.T01:intron 40.0%
AAGGGACATGCAATGTACCA+AGG - Chr2:84101768-84101787 None:intergenic 45.0%
AAGTGGAAACTAAGCGTGTC+TGG + Chr2:84102898-84102917 MsG0280011446.01.T01:CDS 45.0%
AGAATCGGAAAGAAACTCGC+GGG + Chr2:84100980-84100999 MsG0280011446.01.T01:CDS 45.0%
AGTGGAAACTAAGCGTGTCT+GGG + Chr2:84102899-84102918 MsG0280011446.01.T01:CDS 45.0%
CCCATCAGTTTGCAAACATC+TGG - Chr2:84104056-84104075 None:intergenic 45.0%
CTTCCAAATTTCCTCCTGTC+TGG + Chr2:84103378-84103397 MsG0280011446.01.T01:intron 45.0%
GCGAGTTTCTTTCCGATTCT+AGG - Chr2:84100980-84100999 None:intergenic 45.0%
GCTCGCAAACAAACAAGGAA+TGG + Chr2:84104586-84104605 MsG0280011446.01.T01:three_prime_UTR 45.0%
GCTGACTACTGATAGGGTAA+CGG + Chr2:84104111-84104130 MsG0280011446.01.T01:three_prime_UTR 45.0%
TACAGTCAGCTATTGCTCTC+GGG - Chr2:84102412-84102431 None:intergenic 45.0%
TACTGTCAGCTGGGATTTCT+TGG + Chr2:84102499-84102518 MsG0280011446.01.T01:intron 45.0%
TCAGCTGTTGTTGGCAATAG+CGG - Chr2:84102614-84102633 None:intergenic 45.0%
TGCAATGTACCAAGGCAAAC+TGG - Chr2:84101760-84101779 None:intergenic 45.0%
TGGAGATAATGCCATGAGAG+AGG + Chr2:84103025-84103044 MsG0280011446.01.T01:CDS 45.0%
TGTGACTACTATGGGGATTG+GGG + Chr2:84102441-84102460 MsG0280011446.01.T01:intron 45.0%
TTGTTGGGAGTTCAACGGAA+AGG + Chr2:84104463-84104482 MsG0280011446.01.T01:three_prime_UTR 45.0%
! AAGCGTGTCTGGGATTATGT+CGG + Chr2:84102909-84102928 MsG0280011446.01.T01:CDS 45.0%
! GTCGACCCTACAATTTTAGG+GGG + Chr2:84101536-84101555 MsG0280011446.01.T01:intron 45.0%
! TCATGGTTTGTCTTGAGGGT+GGG + Chr2:84104304-84104323 MsG0280011446.01.T01:three_prime_UTR 45.0%
! TTTTTCCCTCGAACTAGCAG+TGG - Chr2:84104518-84104537 None:intergenic 45.0%
!! ATATGTGGGTTTGTTGGCTG+TGG + Chr2:84102684-84102703 MsG0280011446.01.T01:CDS 45.0%
!! CCCTACAATTTTAGGGGGAA+TGG + Chr2:84101541-84101560 MsG0280011446.01.T01:intron 45.0%
!! TGCATGTCCCTTTTTCGCTT+AGG + Chr2:84101776-84101795 MsG0280011446.01.T01:CDS 45.0%
!!! ATATTTATTATTCTATTTTA+TGG + Chr2:84101365-84101384 MsG0280011446.01.T01:intron 5.0%
AAACCACCACTGCTAGTTCG+AGG + Chr2:84104509-84104528 MsG0280011446.01.T01:three_prime_UTR 50.0%
AAAGGAGAGGGACATGAACG+AGG + Chr2:84104481-84104500 MsG0280011446.01.T01:three_prime_UTR 50.0%
AACCACCACTGCTAGTTCGA+GGG + Chr2:84104510-84104529 MsG0280011446.01.T01:three_prime_UTR 50.0%
AGAGGGACATGAACGAGGTA+AGG + Chr2:84104486-84104505 MsG0280011446.01.T01:three_prime_UTR 50.0%
CACCCTCAAGACAAACCATG+AGG - Chr2:84104305-84104324 None:intergenic 50.0%
CCAAGGCAAACTGGACATGT+AGG - Chr2:84101751-84101770 None:intergenic 50.0%
CCTACATGTCCAGTTTGCCT+TGG + Chr2:84101748-84101767 MsG0280011446.01.T01:CDS 50.0%
GACAGCCTTCTGAACTGCTA+CGG - Chr2:84103495-84103514 None:intergenic 50.0%
GCGATTAGATCAAGACACGG+TGG + Chr2:84102250-84102269 MsG0280011446.01.T01:CDS 50.0%
GGAGTTCAACGGAAAGGAGA+GGG + Chr2:84104469-84104488 MsG0280011446.01.T01:three_prime_UTR 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG - Chr2:84103188-84103207 None:intergenic 50.0%
TACTATGGGGATTGGGGTGT+CGG + Chr2:84102447-84102466 MsG0280011446.01.T01:intron 50.0%
TTGTCTTGAGGGTGGGAAGA+CGG + Chr2:84104311-84104330 MsG0280011446.01.T01:three_prime_UTR 50.0%
! CTCATGGTTTGTCTTGAGGG+TGG + Chr2:84104303-84104322 MsG0280011446.01.T01:three_prime_UTR 50.0%
! GAGGGCATGCCATAATACAC+TGG + Chr2:84102847-84102866 MsG0280011446.01.T01:CDS 50.0%
! GTCGACGTTTTCGTCTCTAG+AGG + Chr2:84101337-84101356 MsG0280011446.01.T01:intron 50.0%
!! ATTAGGTTGGACGGAAACCC+TGG + Chr2:84101126-84101145 MsG0280011446.01.T01:intron 50.0%
!! GGTAACGGACCTAGAAAAGC+AGG + Chr2:84104126-84104145 MsG0280011446.01.T01:three_prime_UTR 50.0%
!!! TCCTGGAAGGGGTTTTGTTG+CGG + Chr2:84104185-84104204 MsG0280011446.01.T01:intron 50.0%
AAACCCCTCCTCATCGCTTC+CGG + Chr2:84101026-84101045 MsG0280011446.01.T01:CDS 55.0%
ACTCTCCCAAACACACGCCA+GGG - Chr2:84101146-84101165 None:intergenic 55.0%
AGAGGCAGCAGAACCCTTAC+AGG - Chr2:84102346-84102365 None:intergenic 55.0%
CACTGTGTGCATGCAGACAG+TGG + Chr2:84102996-84103015 MsG0280011446.01.T01:CDS 55.0%
CCAACTGAGCTAAGCTCACG+AGG + Chr2:84103189-84103208 MsG0280011446.01.T01:intron 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - Chr2:84103192-84103211 None:intergenic 55.0%
GGAAACCCTGGCGTGTGTTT+GGG + Chr2:84101138-84101157 MsG0280011446.01.T01:intron 55.0%
GGGAGTTCAACGGAAAGGAG+AGG + Chr2:84104468-84104487 MsG0280011446.01.T01:three_prime_UTR 55.0%
GTTACCGGAAGCGATGAGGA+GGG - Chr2:84101033-84101052 None:intergenic 55.0%
GTTCGGGGAAGACATGCATG+AGG - Chr2:84101006-84101025 None:intergenic 55.0%
TACTCTCCCAAACACACGCC+AGG - Chr2:84101147-84101166 None:intergenic 55.0%
TTACCGGAAGCGATGAGGAG+GGG - Chr2:84101032-84101051 None:intergenic 55.0%
TTCCCTCGAACTAGCAGTGG+TGG - Chr2:84104515-84104534 None:intergenic 55.0%
! CGATGAGGAGGGGTTTGTTC+GGG - Chr2:84101022-84101041 None:intergenic 55.0%
! GATGAGGAGGGGTTTGTTCG+GGG - Chr2:84101021-84101040 None:intergenic 55.0%
! GCGATGAGGAGGGGTTTGTT+CGG - Chr2:84101023-84101042 None:intergenic 55.0%
!! GTGGGTTTGTTGGCTGTGGA+AGG + Chr2:84102688-84102707 MsG0280011446.01.T01:CDS 55.0%
!!! CCTGGAAGGGGTTTTGTTGC+GGG + Chr2:84104186-84104205 MsG0280011446.01.T01:intron 55.0%
!!! CTGGAAGGGGTTTTGTTGCG+GGG + Chr2:84104187-84104206 MsG0280011446.01.T01:intron 55.0%
CATGCAGACAGTGGCAGCTG+TGG + Chr2:84103005-84103024 MsG0280011446.01.T01:CDS 60.0%
CCCGCAACAAAACCCCTTCC+AGG - Chr2:84104189-84104208 None:intergenic 60.0%
CGGAAACCCTGGCGTGTGTT+TGG + Chr2:84101137-84101156 MsG0280011446.01.T01:intron 60.0%
GGTTACCGGAAGCGATGAGG+AGG - Chr2:84101034-84101053 None:intergenic 60.0%
!!! GGGTTTTGTTGCGGGGTGCA+GGG + Chr2:84104194-84104213 MsG0280011446.01.T01:intron 60.0%
!!! GGTTTTGTTGCGGGGTGCAG+GGG + Chr2:84104195-84104214 MsG0280011446.01.T01:intron 60.0%
CAAGGTCCGGGGTTCAACCC+CGG - Chr2:84103148-84103167 None:intergenic 65.0%
GGCGGTTACCGGAAGCGATG+AGG - Chr2:84101037-84101056 None:intergenic 65.0%
GTTGAGCGCGCGTAGCGATG+TGG + Chr2:84100873-84100892 MsG0280011446.01.T01:exon 65.0%
TAGTGGCCGGGGTTGAACCC+CGG + Chr2:84103139-84103158 MsG0280011446.01.T01:intron 65.0%
!!! GGGGTTTTGTTGCGGGGTGC+AGG + Chr2:84104193-84104212 MsG0280011446.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 84100836 84104891 84100836 ID=MsG0280011446.01;Name=MsG0280011446.01
Chr2 mRNA 84100836 84104891 84100836 ID=MsG0280011446.01.T01;Parent=MsG0280011446.01;Name=MsG0280011446.01.T01;_AED=0.43;_eAED=0.44;_QI=54|0.63|0.75|1|0.81|0.75|12|665|349
Chr2 exon 84100836 84101047 84100836 ID=MsG0280011446.01.T01:exon:3206;Parent=MsG0280011446.01.T01
Chr2 exon 84101131 84101153 84101131 ID=MsG0280011446.01.T01:exon:3207;Parent=MsG0280011446.01.T01
Chr2 exon 84101686 84101856 84101686 ID=MsG0280011446.01.T01:exon:3208;Parent=MsG0280011446.01.T01
Chr2 exon 84102249 84102345 84102249 ID=MsG0280011446.01.T01:exon:3209;Parent=MsG0280011446.01.T01
Chr2 exon 84102508 84102520 84102508 ID=MsG0280011446.01.T01:exon:3210;Parent=MsG0280011446.01.T01
Chr2 exon 84102606 84102709 84102606 ID=MsG0280011446.01.T01:exon:3211;Parent=MsG0280011446.01.T01
Chr2 exon 84102839 84103073 84102839 ID=MsG0280011446.01.T01:exon:3212;Parent=MsG0280011446.01.T01
Chr2 exon 84103291 84103344 84103291 ID=MsG0280011446.01.T01:exon:3213;Parent=MsG0280011446.01.T01
Chr2 exon 84103440 84103583 84103440 ID=MsG0280011446.01.T01:exon:3214;Parent=MsG0280011446.01.T01
Chr2 exon 84103814 84103876 84103814 ID=MsG0280011446.01.T01:exon:3215;Parent=MsG0280011446.01.T01
Chr2 exon 84104093 84104147 84104093 ID=MsG0280011446.01.T01:exon:3216;Parent=MsG0280011446.01.T01
Chr2 exon 84104294 84104891 84104294 ID=MsG0280011446.01.T01:exon:3217;Parent=MsG0280011446.01.T01
Chr2 five_prime_UTR 84100836 84100889 84100836 ID=MsG0280011446.01.T01:five_prime_utr;Parent=MsG0280011446.01.T01
Chr2 CDS 84100890 84101047 84100890 ID=MsG0280011446.01.T01:cds;Parent=MsG0280011446.01.T01
Chr2 CDS 84101131 84101153 84101131 ID=MsG0280011446.01.T01:cds;Parent=MsG0280011446.01.T01
Chr2 CDS 84101686 84101856 84101686 ID=MsG0280011446.01.T01:cds;Parent=MsG0280011446.01.T01
Chr2 CDS 84102249 84102345 84102249 ID=MsG0280011446.01.T01:cds;Parent=MsG0280011446.01.T01
Chr2 CDS 84102508 84102520 84102508 ID=MsG0280011446.01.T01:cds;Parent=MsG0280011446.01.T01
Chr2 CDS 84102606 84102709 84102606 ID=MsG0280011446.01.T01:cds;Parent=MsG0280011446.01.T01
Chr2 CDS 84102839 84103073 84102839 ID=MsG0280011446.01.T01:cds;Parent=MsG0280011446.01.T01
Chr2 CDS 84103291 84103344 84103291 ID=MsG0280011446.01.T01:cds;Parent=MsG0280011446.01.T01
Chr2 CDS 84103440 84103583 84103440 ID=MsG0280011446.01.T01:cds;Parent=MsG0280011446.01.T01
Chr2 CDS 84103814 84103864 84103814 ID=MsG0280011446.01.T01:cds;Parent=MsG0280011446.01.T01
Chr2 three_prime_UTR 84103865 84103876 84103865 ID=MsG0280011446.01.T01:three_prime_utr;Parent=MsG0280011446.01.T01
Chr2 three_prime_UTR 84104093 84104147 84104093 ID=MsG0280011446.01.T01:three_prime_utr;Parent=MsG0280011446.01.T01
Chr2 three_prime_UTR 84104294 84104891 84104294 ID=MsG0280011446.01.T01:three_prime_utr;Parent=MsG0280011446.01.T01
Gene Sequence

>MsG0280011446.01.T01

ATGTGGAGTTCAGCAGAGTCGTCTCCGAAGAAGAACAAACTGAATCTTCTTCTTCTCAACTTCTTTTCAATTTCTCTTCTTGGTAACCCTAGAATCGGAAAGAAACTCGCGGGCCTCATGCATGTCTTCCCCGAACAAACCCCTCCTCATCGCTTCCGGTTGGACGGAAACCCTGGCGTGTATGTGCAGTATACTGGGTCAAATGAACACGCACAACCATCCAATGCTACTTCAACTGAACAGCCTACATGTCCAGTTTGCCTTGGTACATTGCATGTCCCTTTTTCGCTTAGGCTTATGTACTACAGCTTACCTTCTAATGTAAGTAGTTATAGATGCAAGCTGAGAAAGGAGCGATTAGATCAAGACACGGTGGAATTCTTACAACCATATGCCATCATTCTTTCCATTGCTCCTGTATTTCGAAATGGGCAGATTCTTCTTGTCCTCTGGGATTTCTTGGTATGCCGCTATTGCCAACAACAGCTGAAAATTCTATATGTTCGTTTGTCAAACACTGAGAACCTTTGGATATGTGTTATATGTGGGTTTGTTGGCTGTGGAAGATATAAAGGAGGGCATGCCATAATACACTGGAAAGAAACGCAGCATTGCTATTCCTTAGAAGTGGAAACTAAGCGTGTCTGGGATTATGTCGGAGACAACTATGTCCATAGACTTATTCAGTCCAAAACTGATGGGAAGTTAGTTGAGCTGAACTCTCACTGTGTGCATGCAGACAGTGGCAGCTGTGGAGATAATGCCATGAGAGAGGCTATACTTAATAGTAAAGTTGAAGCGATTGTCAATGAATACAATGAATTGCTTGCTACACAACTTGAAAACCAAAAATTGTATTTTGAATCCTTATTACAACAAGTAGAACAAGAAACTGAAGGAAAAATTTCCGTAGCAGTTCAGAAGGCTGTCAGTCTCAAACAGCATAAGATTCAGGCGAAGATCGATCGATGTAACAAAGAGAAGAAGTTTCTGGATGAGCTTAATGACAATCTTTTGAAAACGAGGAGATCTGGAAGCCAAGTTACTTGA

Protein sequence

>MsG0280011446.01.T01

MWSSAESSPKKNKLNLLLLNFFSISLLGNPRIGKKLAGLMHVFPEQTPPHRFRLDGNPGVYVQYTGSNEHAQPSNATSTEQPTCPVCLGTLHVPFSLRLMYYSLPSNVSSYRCKLRKERLDQDTVEFLQPYAIILSIAPVFRNGQILLVLWDFLVCRYCQQQLKILYVRLSNTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVETKRVWDYVGDNYVHRLIQSKTDGKLVELNSHCVHADSGSCGDNAMREAILNSKVEAIVNEYNELLATQLENQKLYFESLLQQVEQETEGKISVAVQKAVSLKQHKIQAKIDRCNKEKKFLDELNDNLLKTRRSGSQVT*