AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046868.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046868.01.T01 MTR_4g116210 97.043 575 15 1 1 573 1 575 0.0 1112
MsG0880046868.01.T01 MTR_2g450710 73.860 570 144 3 2 571 3 567 0.0 846
MsG0880046868.01.T01 MTR_4g073690 38.241 557 309 7 8 560 12 537 2.46e-118 361
MsG0880046868.01.T01 MTR_2g104250 55.556 351 105 9 224 571 1 303 1.15e-115 346
MsG0880046868.01.T01 MTR_7g029015 35.445 584 341 6 9 566 13 586 1.17e-106 332
MsG0880046868.01.T01 MTR_5g022380 34.483 551 320 5 12 560 14 525 1.61e-100 315
MsG0880046868.01.T01 MTR_3g099150 31.724 580 353 4 3 564 7 561 1.44e-92 295
MsG0880046868.01.T01 MTR_1g111510 33.094 556 337 10 12 557 27 557 2.48e-86 280
MsG0880046868.01.T01 MTR_1g111540 32.554 556 340 10 12 557 27 557 6.77e-83 271
MsG0880046868.01.T01 MTR_1g111530 31.449 566 333 11 12 557 23 553 1.72e-81 267
MsG0880046868.01.T01 MTR_2g100400 29.350 569 336 7 12 559 8 531 1.63e-79 260
MsG0880046868.01.T01 MTR_1g050550 31.365 542 346 8 26 557 39 564 4.13e-78 258
MsG0880046868.01.T01 MTR_5g090570 28.649 555 347 6 10 556 10 523 9.91e-76 250
MsG0880046868.01.T01 MTR_1g111550 30.319 564 341 12 12 557 26 555 4.24e-75 250
MsG0880046868.01.T01 MTR_1g059080 30.396 556 352 10 12 557 25 555 1.01e-73 246
MsG0880046868.01.T01 MTR_4g073690 36.430 409 230 6 8 412 12 394 1.81e-71 234
MsG0880046868.01.T01 MTR_7g102880 28.897 571 350 13 12 557 30 569 4.53e-71 240
MsG0880046868.01.T01 MTR_5g022380 32.889 450 261 5 113 560 5 415 4.63e-70 232
MsG0880046868.01.T01 MTR_7g083660 28.796 573 362 11 7 557 3 551 2.70e-52 188
MsG0880046868.01.T01 MTR_3g466040 27.372 548 352 10 12 556 8 512 7.79e-47 172
MsG0880046868.01.T01 MTR_5g026350 26.897 580 374 15 6 557 2 559 8.26e-46 170
MsG0880046868.01.T01 MTR_8g071920 27.461 579 372 14 6 557 43 600 2.96e-45 169
MsG0880046868.01.T01 MTR_3g466110 26.886 517 335 10 11 526 7 481 8.40e-41 155
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046868.01.T01 AT1G80530 58.524 569 220 5 2 569 4 557 0.0 659
MsG0880046868.01.T01 AT4G34950 36.934 574 320 9 12 566 17 567 2.30e-122 372
MsG0880046868.01.T01 AT2G16660 36.051 552 319 7 12 561 15 534 2.80e-108 335
MsG0880046868.01.T01 AT5G14120 35.149 569 338 7 12 560 17 574 4.07e-106 331
MsG0880046868.01.T01 AT3G01930 33.276 580 357 4 3 560 8 579 7.24e-104 325
MsG0880046868.01.T01 AT5G50520 32.668 551 336 4 12 560 17 534 6.94e-98 308
MsG0880046868.01.T01 AT5G50630 32.668 551 336 4 12 560 17 534 6.94e-98 308
MsG0880046868.01.T01 AT1G18940 30.810 568 322 7 9 560 7 519 8.80e-83 268
MsG0880046868.01.T01 AT2G39210 31.059 557 351 11 12 557 22 556 5.99e-82 268
MsG0880046868.01.T01 AT2G28120 30.935 556 348 9 12 557 18 547 5.85e-81 265
MsG0880046868.01.T01 AT1G74780 29.174 569 337 8 9 559 5 525 1.19e-77 255
MsG0880046868.01.T01 AT3G01930 32.479 468 286 4 115 560 7 466 6.07e-77 251
MsG0880046868.01.T01 AT2G34350 28.142 565 339 7 12 561 8 520 4.35e-71 238
MsG0880046868.01.T01 AT2G34350 28.142 565 339 7 12 561 8 520 4.35e-71 238
MsG0880046868.01.T01 AT2G34355 29.130 563 334 11 12 561 8 518 1.71e-68 231
MsG0880046868.01.T01 AT3G01930 31.651 436 270 3 3 418 8 435 3.75e-68 227
MsG0880046868.01.T01 AT2G16660 34.243 403 236 6 12 412 15 390 8.96e-65 217
MsG0880046868.01.T01 AT1G31470 28.571 567 361 15 2 559 34 565 1.81e-53 191
MsG0880046868.01.T01 AT5G45275 27.826 575 372 15 6 557 2 556 1.52e-52 189
MsG0880046868.01.T01 AT4G19450 29.319 573 368 16 6 557 2 558 2.23e-51 186
MsG0880046868.01.T01 AT3G01630 27.886 563 351 15 12 559 42 564 5.46e-51 184
MsG0880046868.01.T01 AT3G01630 27.886 563 351 15 12 559 24 546 6.15e-51 184
MsG0880046868.01.T01 AT2G30300 27.207 555 332 12 11 557 7 497 1.28e-43 162
MsG0880046868.01.T01 AT2G34355 27.358 424 251 10 148 566 2 373 8.10e-41 152
MsG0880046868.01.T01 AT4G19450 29.927 411 265 10 6 401 2 404 2.04e-38 146

Find 157 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCCTTCAAATCAGTTCT+TGG 0.190256 8:-79253482 MsG0880046868.01.T01:CDS
GTCTTATCTTTCCTAGGTTT+TGG 0.209990 8:-79253338 MsG0880046868.01.T01:CDS
TGTAATGAAGTTGAGAATTT+TGG 0.215837 8:-79250433 MsG0880046868.01.T01:three_prime_UTR
CAAAGTCAAGTTACTCTTCT+TGG 0.228205 8:-79253452 MsG0880046868.01.T01:CDS
GGAAACAATGTCATCTTTAT+AGG 0.228430 8:+79252227 None:intergenic
TATCCAGCAGTTGGAGTTCT+TGG 0.237180 8:-79251081 MsG0880046868.01.T01:CDS
CAAGGAGCGGTCTTCTTTAT+TGG 0.245815 8:+79250665 None:intergenic
CTTGCTGCTGTTTGTGCTGC+TGG 0.255600 8:-79250814 MsG0880046868.01.T01:CDS
ACAAGATTATCATAACTATC+TGG 0.256590 8:+79251139 None:intergenic
CGTCCTTGTACTCCGGTTAC+TGG 0.260723 8:-79252422 MsG0880046868.01.T01:CDS
TTCTACCGTGTCTTATGTTT+TGG 0.279899 8:-79252291 MsG0880046868.01.T01:CDS
CATTCCAAGTATCTGGTAAA+TGG 0.281870 8:+79250267 None:intergenic
TATTGAATCTATGAGATAAT+TGG 0.282244 8:-79250340 MsG0880046868.01.T01:three_prime_UTR
GTAAAGTCTTCCCCTCTTCT+AGG 0.291579 8:+79251993 None:intergenic
GTTTATTGAGGTCTATTTCC+TGG 0.298074 8:-79250558 MsG0880046868.01.T01:three_prime_UTR
CCAAGTTTCAAGTGTGGCCT+TGG 0.298303 8:-79252363 MsG0880046868.01.T01:CDS
TATCTGAAGAAGATTGTAAA+AGG 0.305994 8:+79252114 None:intergenic
TTGGCAAAGCAACAAGGTTT+TGG 0.316013 8:-79250898 MsG0880046868.01.T01:CDS
AAGAATTGCCCTAAATATTT+CGG 0.318658 8:+79252523 None:intergenic
CTAGGCCTTCTCTTCTTTGA+AGG 0.325170 8:+79252011 None:intergenic
TCCCTCCCTTCCTTATCCTT+TGG 0.327889 8:-79253285 MsG0880046868.01.T01:intron
TGTTACTGTTATTAATAATC+TGG 0.330671 8:-79251898 MsG0880046868.01.T01:CDS
TTCAATTTCGTCGGACGGCT+TGG 0.331844 8:-79251813 MsG0880046868.01.T01:CDS
GCAGGAATATTGAAAGGTTA+TGG 0.337337 8:-79252569 MsG0880046868.01.T01:CDS
ATGTGATCATTCCAAGTATC+TGG 0.343822 8:+79250260 None:intergenic
CTTGGTGTTGCCAATGATAT+TGG 0.353299 8:-79253434 MsG0880046868.01.T01:CDS
TACTTTGTTGGTGTTGGAAC+TGG 0.359991 8:-79251921 MsG0880046868.01.T01:CDS
TCCTGTTATTCCTTGCCATT+GGG 0.360749 8:-79252481 MsG0880046868.01.T01:CDS
GCAACTGTTCCTCTACTGAT+AGG 0.361298 8:+79252590 None:intergenic
AGCATAAAGCATTTGGTAAA+CGG 0.367493 8:+79250753 None:intergenic
ATCAGTAGAGGAACAGTTGC+AGG 0.372250 8:-79252587 MsG0880046868.01.T01:CDS
TCCCAATGGCAAGGAATAAC+AGG 0.373136 8:+79252480 None:intergenic
TAGGACTTGGAGCTGCAGTA+TGG 0.375083 8:-79253550 MsG0880046868.01.T01:CDS
TTTGTATACTTTGTTGGTGT+TGG 0.375978 8:-79251927 MsG0880046868.01.T01:CDS
TGGATAAAGTGTTCCTTTGA+TGG 0.377063 8:+79251098 None:intergenic
TTCCTGTTATTCCTTGCCAT+TGG 0.378198 8:-79252482 MsG0880046868.01.T01:CDS
GAAAATGTTGGACTTCTTCC+TGG 0.393238 8:-79253410 MsG0880046868.01.T01:CDS
TTCAATAGGTGTGGGACTAC+TGG 0.397733 8:-79250461 MsG0880046868.01.T01:three_prime_UTR
TAAAGAAGACCGCTCCTTGA+AGG 0.412169 8:-79250661 MsG0880046868.01.T01:three_prime_UTR
GAAACAATGTCATCTTTATA+GGG 0.416037 8:+79252228 None:intergenic
AAAGTAACCTTAAAACAATC+TGG 0.419436 8:+79250844 None:intergenic
AACCGCCAGCATAAAGCATT+TGG 0.422095 8:+79250746 None:intergenic
TTGAAGGAAGGTGAGTAAAG+TGG 0.430314 8:+79253494 None:intergenic
TATTACTGCAATGCATATAA+TGG 0.431027 8:-79250526 MsG0880046868.01.T01:three_prime_UTR
CCAAGGCCACACTTGAAACT+TGG 0.431840 8:+79252363 None:intergenic
AAACGATCCCACGGACAGTA+TGG 0.432376 8:-79251173 MsG0880046868.01.T01:CDS
GTTTCAAGTGTTTCATGTGT+TGG 0.434535 8:-79250868 MsG0880046868.01.T01:CDS
TGATGGCAAATGCAAATAGA+AGG 0.434880 8:+79251115 None:intergenic
CAAGTTTCAAGTGTGGCCTT+GGG 0.435418 8:-79252362 MsG0880046868.01.T01:CDS
GGTGCTGTCTTATCTTTCCT+AGG 0.435703 8:-79253344 MsG0880046868.01.T01:CDS
TGTGATGATTCTTCTTCTCA+TGG 0.436080 8:-79252264 MsG0880046868.01.T01:CDS
GCATAAAGCATTTGGTAAAC+GGG 0.436826 8:+79250754 None:intergenic
TTTGCAACAAATTCCCTCCT+TGG 0.438019 8:-79253382 MsG0880046868.01.T01:CDS
ATTACCATTTACCAGATACT+TGG 0.441378 8:-79250271 MsG0880046868.01.T01:three_prime_UTR
CAAGAAGAGTAACTTGACTT+TGG 0.441728 8:+79253453 None:intergenic
CTATTTGCATTTGCCATCAA+AGG 0.444697 8:-79251111 MsG0880046868.01.T01:CDS
TCAGCTCAGCTCAATGTTGA+AGG 0.445175 8:-79253600 None:intergenic
TCTTAATTGCATGACATTTG+AGG 0.445244 8:+79250712 None:intergenic
TTATCTAATAATAGCTAGAT+TGG 0.445919 8:+79250496 None:intergenic
AGTCAAGATAATGCTGGAAA+TGG 0.447641 8:+79250789 None:intergenic
ATGACAGTGAAGCACAAAAC+AGG 0.453320 8:+79252455 None:intergenic
CTCAACTGCTGGTCTGCAGC+CGG 0.456703 8:+79250593 None:intergenic
AAGATTGTTACCAAAGGATA+AGG 0.461458 8:+79253275 None:intergenic
TCTTGTTCGTCCTTGTACTC+CGG 0.463530 8:-79252429 MsG0880046868.01.T01:CDS
GAAGAACTATCTCCAGTAAC+CGG 0.474809 8:+79252410 None:intergenic
AATTTCGTCGGACGGCTTGG+TGG 0.475400 8:-79251810 MsG0880046868.01.T01:CDS
ATCTGAAGAAGATTGTAAAA+GGG 0.475867 8:+79252115 None:intergenic
TTAAGCATGTATGTTAGGTA+TGG 0.476577 8:-79250388 MsG0880046868.01.T01:three_prime_UTR
GTTTACCAAATGCTTTATGC+TGG 0.478271 8:-79250751 MsG0880046868.01.T01:CDS
GAAACCAAGAACTGATTTGA+AGG 0.479945 8:+79253478 None:intergenic
TCTGATTGTTTGATTCAAGA+AGG 0.480894 8:-79252158 MsG0880046868.01.T01:CDS
TGAAGGAAGGTGAGTAAAGT+GGG 0.483749 8:+79253495 None:intergenic
AGGACTTGGAGCTGCAGTAT+GGG 0.484708 8:-79253549 MsG0880046868.01.T01:CDS
GAAGAAAATGAGCAAAGTGT+TGG 0.487263 8:-79252185 MsG0880046868.01.T01:CDS
TTCGTCGGACGGCTTGGTGG+AGG 0.488133 8:-79251807 MsG0880046868.01.T01:CDS
GGAAATAGACCTCAATAAAC+CGG 0.490810 8:+79250561 None:intergenic
ATCTTTATAGGGATAGCAAA+TGG 0.502794 8:+79252239 None:intergenic
AGCAGTTGAGGATCCATGTC+CGG 0.506845 8:-79250580 MsG0880046868.01.T01:three_prime_UTR
ATTCCAAGAACTCCAACTGC+TGG 0.512431 8:+79251078 None:intergenic
AAGAAGAGAAGGCCTAGAAG+AGG 0.513322 8:-79252005 MsG0880046868.01.T01:CDS
GATCCATGTCCGGTTTATTG+AGG 0.516868 8:-79250570 MsG0880046868.01.T01:three_prime_UTR
TCTGAAGAAGATTGTAAAAG+GGG 0.520635 8:+79252116 None:intergenic
CAAGATTATCATAACTATCT+GGG 0.523851 8:+79251140 None:intergenic
CAAATGTCATGCAATTAAGA+AGG 0.527155 8:-79250709 MsG0880046868.01.T01:exon
GGAGTTCTTGGAATCTGCTA+CGG 0.528639 8:-79251069 MsG0880046868.01.T01:CDS
GGAACACTTTATCCAGCAGT+TGG 0.530670 8:-79251090 MsG0880046868.01.T01:CDS
GATAGGGAAATTTCTCATGT+TGG 0.530854 8:+79252607 None:intergenic
CCAAGAACTGATTTGAAGGA+AGG 0.531691 8:+79253482 None:intergenic
TCTGTATGGACACATATGAA+TGG 0.533011 8:-79250305 MsG0880046868.01.T01:three_prime_UTR
CAGCTCAATGTTGAAGGTGA+AGG 0.533156 8:-79253594 None:intergenic
GTTGATATGCTTCTTGCTGA+GGG 0.533564 8:-79252050 MsG0880046868.01.T01:CDS
ATGGTATTGACAACTGAGAA+AGG 0.533695 8:-79250363 MsG0880046868.01.T01:three_prime_UTR
AATGATATTGGTGAAAATGT+TGG 0.536419 8:-79253422 MsG0880046868.01.T01:CDS
CGGCTGCAGACCAGCAGTTG+AGG 0.539045 8:-79250592 MsG0880046868.01.T01:three_prime_UTR
CAACTGTTCCTCTACTGATA+GGG 0.543472 8:+79252591 None:intergenic
TCTTATAGTCAAGATAATGC+TGG 0.543856 8:+79250783 None:intergenic
TGTCATTAGGTAATCCACTT+GGG 0.544578 8:-79250969 MsG0880046868.01.T01:CDS
GGAATGATATGTAATCTGTA+TGG 0.545647 8:-79250319 MsG0880046868.01.T01:three_prime_UTR
AACTGCTGGTCTGCAGCCGG+TGG 0.546566 8:+79250596 None:intergenic
TCTCCAGTAACCGGAGTACA+AGG 0.548630 8:+79252419 None:intergenic
TGTTGATATGCTTCTTGCTG+AGG 0.549046 8:-79252051 MsG0880046868.01.T01:CDS
TACCAAATGCTTTATGCTGG+CGG 0.553879 8:-79250748 MsG0880046868.01.T01:CDS
ATTAATAATCTGGCTCAAGT+AGG 0.554752 8:-79251888 MsG0880046868.01.T01:CDS
ATGTATGTTAGGTATGGTAA+TGG 0.555099 8:-79250382 MsG0880046868.01.T01:three_prime_UTR
AATTTGTTGCAAACAATACC+AGG 0.555995 8:+79253392 None:intergenic
GGACATGGATCCTCAACTGC+TGG 0.556062 8:+79250582 None:intergenic
AGAAGAGAAGGCCTAGAAGA+GGG 0.556642 8:-79252004 MsG0880046868.01.T01:CDS
ATGTCATTAGGTAATCCACT+TGG 0.558733 8:-79250970 MsG0880046868.01.T01:CDS
TAGTACCTTCAAAGAAGAGA+AGG 0.558949 8:-79252016 MsG0880046868.01.T01:CDS
AGACCACCATGGGTAGGACT+TGG 0.561546 8:-79253563 MsG0880046868.01.T01:CDS
ATGCTTCTTGCTGAGGGTGA+AGG 0.562587 8:-79252044 MsG0880046868.01.T01:CDS
TTTCATCCAAGTTTCAAGTG+TGG 0.566080 8:-79252369 MsG0880046868.01.T01:CDS
CATGTCATCCATACTGTCCG+TGG 0.571849 8:+79251165 None:intergenic
GTATGGGTGCAAATAGCAGT+TGG 0.575218 8:-79253533 MsG0880046868.01.T01:CDS
ACAGTTGCAGGAATATTGAA+AGG 0.576676 8:-79252575 MsG0880046868.01.T01:CDS
AGCTCAATGTTGAAGGTGAA+GGG 0.577214 8:-79253593 None:intergenic
TCTTCTTCAGATACCGCACT+TGG 0.577266 8:-79252104 MsG0880046868.01.T01:CDS
TTGCTACCAACAGTTGTGCA+TGG 0.580783 8:-79252652 MsG0880046868.01.T01:CDS
TTGTTACCAAAGGATAAGGA+AGG 0.581498 8:+79253279 None:intergenic
GGGAGGAACAAGACCACCAT+GGG 0.584753 8:-79253573 MsG0880046868.01.T01:CDS
GGAATATTGAAAGGTTATGG+AGG 0.586644 8:-79252566 MsG0880046868.01.T01:CDS
TGTTAACCATGCACAACTGT+TGG 0.586949 8:+79252646 None:intergenic
AGAAATTTCCCTATCAGTAG+AGG 0.588468 8:-79252599 MsG0880046868.01.T01:CDS
GCTCAAGTAGGTGCTGCTCA+AGG 0.589629 8:-79251876 MsG0880046868.01.T01:CDS
GCAGTAATACACAGCAGACC+AGG 0.597746 8:+79250540 None:intergenic
ACCAAAGGATAAGGAAGGGA+GGG 0.599201 8:+79253284 None:intergenic
AGACCTCAATAAACCGGACA+TGG 0.599787 8:+79250567 None:intergenic
TCATAAAACATCGGCTACAG+AGG 0.601581 8:+79250621 None:intergenic
CTCACTGTCGTATATACGCC+CGG 0.602774 8:+79250921 None:intergenic
GCGTATATACGACAGTGAGT+TGG 0.607058 8:-79250917 MsG0880046868.01.T01:CDS
GAAGAGAAGGCCTAGAAGAG+GGG 0.607708 8:-79252003 MsG0880046868.01.T01:CDS
ATGGACACATATGAATGGAA+AGG 0.611581 8:-79250300 MsG0880046868.01.T01:three_prime_UTR
TGCAACAAACCTTCAAGGAG+CGG 0.615268 8:+79250652 None:intergenic
GTCATTAGGTAATCCACTTG+GGG 0.617683 8:-79250968 MsG0880046868.01.T01:CDS
AAACAGGAATCCCAATGGCA+AGG 0.624354 8:+79252471 None:intergenic
ATGTCATCCATACTGTCCGT+GGG 0.631231 8:+79251166 None:intergenic
GCTCCAAGTCCTACCCATGG+TGG 0.632671 8:+79253560 None:intergenic
GAGAAAAGTAATGCCCCAAG+TGG 0.637203 8:+79250955 None:intergenic
GCCAGAGAACACCAAAACCT+AGG 0.638895 8:+79253327 None:intergenic
TACAAGTAAATATACACCCA+AGG 0.640108 8:+79252346 None:intergenic
TGAAAAGCATAAGCCAAGGA+GGG 0.642744 8:+79253369 None:intergenic
ATGAAAAGCATAAGCCAAGG+AGG 0.643527 8:+79253368 None:intergenic
TGTTACCAAAGGATAAGGAA+GGG 0.645631 8:+79253280 None:intergenic
AGTGAGTTGGCAAAGCAACA+AGG 0.650546 8:-79250904 MsG0880046868.01.T01:CDS
CCAATGAAAAGCATAAGCCA+AGG 0.652939 8:+79253365 None:intergenic
ATCACTTGAACTACCAAGTG+CGG 0.653407 8:+79252091 None:intergenic
GGAACAAGACCACCATGGGT+AGG 0.658417 8:-79253569 MsG0880046868.01.T01:CDS
GCAGGAAGAAAACGATCCCA+CGG 0.658661 8:-79251182 MsG0880046868.01.T01:intron
ATGTAGAATGTAATCAAGTG+TGG 0.660260 8:+79252319 None:intergenic
GGTAGTTCAAGTGATGCTGA+TGG 0.660575 8:-79252083 MsG0880046868.01.T01:CDS
GCAGCTCCAAGTCCTACCCA+TGG 0.661636 8:+79253557 None:intergenic
TACCAAAGGATAAGGAAGGG+AGG 0.665963 8:+79253283 None:intergenic
GCACAAAACAGGAATCCCAA+TGG 0.669657 8:+79252466 None:intergenic
CCGGTGGCATCATAAAACAT+CGG 0.684103 8:+79250612 None:intergenic
AGCCACCAAAACATAAGACA+CGG 0.685159 8:+79252286 None:intergenic
AGGGAGGAACAAGACCACCA+TGG 0.686988 8:-79253574 MsG0880046868.01.T01:CDS
TCAATGTTGAAGGTGAAGGG+AGG 0.688811 8:-79253590 MsG0880046868.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGATAAAATTATATTAGT+CGG + Chr8:79251155-79251174 None:intergenic 10.0%
!!! ATTATTAGATAATTAGTTTT+TGG - Chr8:79253367-79253386 MsG0880046868.01.T01:CDS 10.0%
!!! TTATTTTTTGTATACTTTGT+TGG - Chr8:79251919-79251938 MsG0880046868.01.T01:CDS 15.0%
!! ATATCAGATAAAATTTGAAC+AGG - Chr8:79252119-79252138 MsG0880046868.01.T01:CDS 20.0%
!! TATTGAATCTATGAGATAAT+TGG - Chr8:79253512-79253531 MsG0880046868.01.T01:CDS 20.0%
!! TCTAAGCTTGATTAATAAAA+AGG - Chr8:79252411-79252430 MsG0880046868.01.T01:CDS 20.0%
!! TGTTACTGTTATTAATAATC+TGG - Chr8:79251954-79251973 MsG0880046868.01.T01:CDS 20.0%
!! TTATCTAATAATAGCTAGAT+TGG + Chr8:79253359-79253378 None:intergenic 20.0%
!!! ATTTTCAATATTGATTCCTA+CGG - Chr8:79252812-79252831 MsG0880046868.01.T01:intron 20.0%
!!! TGCTTAAAAACAAATTTTCT+AGG + Chr8:79253451-79253470 None:intergenic 20.0%
!!! TTCTGATTCATTGATTTTTT+GGG + Chr8:79251650-79251669 None:intergenic 20.0%
!!! TTGTTTTAAGGTTACTTTTT+TGG - Chr8:79253013-79253032 MsG0880046868.01.T01:intron 20.0%
! AAAGTAACCTTAAAACAATC+TGG + Chr8:79253011-79253030 None:intergenic 25.0%
! AAGAATTGCCCTAAATATTT+CGG + Chr8:79251332-79251351 None:intergenic 25.0%
! AATGATATTGGTGAAAATGT+TGG - Chr8:79250430-79250449 MsG0880046868.01.T01:three_prime_UTR 25.0%
! ACAAGATTATCATAACTATC+TGG + Chr8:79252716-79252735 None:intergenic 25.0%
! AGTAAGTATTTAGAAGTCTA+CGG - Chr8:79252588-79252607 MsG0880046868.01.T01:CDS 25.0%
! ATCTGAAGAAGATTGTAAAA+GGG + Chr8:79251740-79251759 None:intergenic 25.0%
! ATGGCAAGAAATCAAAATTA+TGG + Chr8:79250860-79250879 None:intergenic 25.0%
! CAAGATTATCATAACTATCT+GGG + Chr8:79252715-79252734 None:intergenic 25.0%
! GAAACAATGTCATCTTTATA+GGG + Chr8:79251627-79251646 None:intergenic 25.0%
! GGTTAATTATGTTTAGTAGA+TGG - Chr8:79251084-79251103 MsG0880046868.01.T01:CDS 25.0%
! TATCTGAAGAAGATTGTAAA+AGG + Chr8:79251741-79251760 None:intergenic 25.0%
! TATTACTGCAATGCATATAA+TGG - Chr8:79253326-79253345 MsG0880046868.01.T01:CDS 25.0%
! TGGCAAGAAATCAAAATTAT+GGG + Chr8:79250859-79250878 None:intergenic 25.0%
! TGTTCATTCTTTCTTTATCA+GGG - Chr8:79250944-79250963 MsG0880046868.01.T01:CDS 25.0%
! TTGTTCATTCTTTCTTTATC+AGG - Chr8:79250943-79250962 MsG0880046868.01.T01:CDS 25.0%
!! AACATTTTCACCAATATCAT+TGG + Chr8:79250431-79250450 None:intergenic 25.0%
!! AGTTTTCACCGAAATATTTA+GGG - Chr8:79251321-79251340 MsG0880046868.01.T01:intron 25.0%
!! ATTTTATCATATTGCAGCTA+TGG - Chr8:79251164-79251183 MsG0880046868.01.T01:CDS 25.0%
!! TGTAATGAAGTTGAGAATTT+TGG - Chr8:79253419-79253438 MsG0880046868.01.T01:CDS 25.0%
!! TGTTCTTTTACCTTTTTTCT+AGG - Chr8:79252314-79252333 MsG0880046868.01.T01:CDS 25.0%
!!! AATTAGTTTTTGGCTTCAAT+AGG - Chr8:79253377-79253396 MsG0880046868.01.T01:CDS 25.0%
!!! ATAGTTTTTACTTTTGAACC+AGG - Chr8:79252524-79252543 MsG0880046868.01.T01:CDS 25.0%
!!! CTTCTGATTCATTGATTTTT+TGG + Chr8:79251651-79251670 None:intergenic 25.0%
!!! TCTGATTCATTGATTTTTTG+GGG + Chr8:79251649-79251668 None:intergenic 25.0%
!!! TGTTTTTAAGCATGTATGTT+AGG - Chr8:79253459-79253478 MsG0880046868.01.T01:CDS 25.0%
!!! TTCAGTTTTTTCAATTTCGT+CGG - Chr8:79252030-79252049 MsG0880046868.01.T01:CDS 25.0%
!!! TTTTTCAACTTCATGTCATT+AGG - Chr8:79252870-79252889 MsG0880046868.01.T01:intron 25.0%
AACATAATTAACCGCCTATT+TGG + Chr8:79251077-79251096 None:intergenic 30.0%
AAGATTGTTACCAAAGGATA+AGG + Chr8:79250580-79250599 None:intergenic 30.0%
ACCACATAAACCTAGAAAAA+AGG + Chr8:79252327-79252346 None:intergenic 30.0%
ACTTAGAAAAGTTATCGCAA+AGG + Chr8:79251033-79251052 None:intergenic 30.0%
ATATATCAGATGTCGAAACT+CGG - Chr8:79251114-79251133 MsG0880046868.01.T01:CDS 30.0%
ATCTTTATAGGGATAGCAAA+TGG + Chr8:79251616-79251635 None:intergenic 30.0%
ATGTAGAATGTAATCAAGTG+TGG + Chr8:79251536-79251555 None:intergenic 30.0%
ATGTATGTTAGGTATGGTAA+TGG - Chr8:79253470-79253489 MsG0880046868.01.T01:CDS 30.0%
ATTACCATTTACCAGATACT+TGG - Chr8:79253581-79253600 MsG0880046868.01.T01:CDS 30.0%
CAAATGTCATGCAATTAAGA+AGG - Chr8:79253143-79253162 MsG0880046868.01.T01:intron 30.0%
CATTAAAAACTTTGACGGTA+TGG - Chr8:79252274-79252293 MsG0880046868.01.T01:CDS 30.0%
GAAATCAAAATTATGGGTCA+AGG + Chr8:79250853-79250872 None:intergenic 30.0%
GACGTATATAAACAGAGATA+TGG - Chr8:79250982-79251001 MsG0880046868.01.T01:CDS 30.0%
GAGATAGTTCTTCAGAAAAA+TGG - Chr8:79251452-79251471 MsG0880046868.01.T01:intron 30.0%
GGAAACAATGTCATCTTTAT+AGG + Chr8:79251628-79251647 None:intergenic 30.0%
GGAATGATATGTAATCTGTA+TGG - Chr8:79253533-79253552 MsG0880046868.01.T01:CDS 30.0%
GTAAGTATTTAGAAGTCTAC+GGG - Chr8:79252589-79252608 MsG0880046868.01.T01:CDS 30.0%
GTGGTTAATGTCATTCAAAT+AGG - Chr8:79251051-79251070 MsG0880046868.01.T01:CDS 30.0%
TACAAGTAAATATACACCCA+AGG + Chr8:79251509-79251528 None:intergenic 30.0%
TAGGTTTATGTGGTTATGTT+GGG - Chr8:79252333-79252352 MsG0880046868.01.T01:CDS 30.0%
TAGTACCAAACTTTCTGAAT+TGG - Chr8:79250806-79250825 MsG0880046868.01.T01:CDS 30.0%
TATCACCAATTCAGAAAGTT+TGG + Chr8:79250814-79250833 None:intergenic 30.0%
TATGTTTAGTAGATGGTGAA+TGG - Chr8:79251091-79251110 MsG0880046868.01.T01:CDS 30.0%
TCTGAAGAAGATTGTAAAAG+GGG + Chr8:79251739-79251758 None:intergenic 30.0%
TCTGATTGTTTGATTCAAGA+AGG - Chr8:79251694-79251713 MsG0880046868.01.T01:intron 30.0%
TCTTAATTGCATGACATTTG+AGG + Chr8:79253143-79253162 None:intergenic 30.0%
TCTTATAGTCAAGATAATGC+TGG + Chr8:79253072-79253091 None:intergenic 30.0%
TGTTCTAACAGATTCTTGTT+TGG - Chr8:79252551-79252570 MsG0880046868.01.T01:CDS 30.0%
TTAAGCATGTATGTTAGGTA+TGG - Chr8:79253464-79253483 MsG0880046868.01.T01:CDS 30.0%
TTGAACAGGTGTATAATCAT+TGG - Chr8:79252133-79252152 MsG0880046868.01.T01:CDS 30.0%
TTTGTATACTTTGTTGGTGT+TGG - Chr8:79251925-79251944 MsG0880046868.01.T01:CDS 30.0%
! AGCATAAAGCATTTGGTAAA+CGG + Chr8:79253102-79253121 None:intergenic 30.0%
! ATTAATAATCTGGCTCAAGT+AGG - Chr8:79251964-79251983 MsG0880046868.01.T01:CDS 30.0%
! ATTTCACGATTTTCATTTGC+AGG - Chr8:79252652-79252671 MsG0880046868.01.T01:CDS 30.0%
! CAGTTTTCACCGAAATATTT+AGG - Chr8:79251320-79251339 MsG0880046868.01.T01:intron 30.0%
! TATTTTGCAACAAACCTTCA+AGG + Chr8:79253208-79253227 None:intergenic 30.0%
! TTTGCGATAACTTTTCTAAG+TGG - Chr8:79251032-79251051 MsG0880046868.01.T01:CDS 30.0%
!! AATTTGTTGCAAACAATACC+AGG + Chr8:79250463-79250482 None:intergenic 30.0%
!! AGAGGCATTAAAAACTTTGA+CGG - Chr8:79252269-79252288 MsG0880046868.01.T01:CDS 30.0%
!!! ACCTTTTTTCTAGGTTTATG+TGG - Chr8:79252323-79252342 MsG0880046868.01.T01:CDS 30.0%
!!! GGAAGACTTTACATTTTTTG+AGG - Chr8:79251870-79251889 MsG0880046868.01.T01:CDS 30.0%
AATCTGTTAGAACAACAACC+TGG + Chr8:79252545-79252564 None:intergenic 35.0%
ACAGTTGCAGGAATATTGAA+AGG - Chr8:79251277-79251296 MsG0880046868.01.T01:intron 35.0%
AGAAATTTCCCTATCAGTAG+AGG - Chr8:79251253-79251272 MsG0880046868.01.T01:intron 35.0%
AGGAAGAAGATTGTTACCAA+AGG + Chr8:79250586-79250605 None:intergenic 35.0%
AGTCAAGATAATGCTGGAAA+TGG + Chr8:79253066-79253085 None:intergenic 35.0%
ATATTAGTCGGTCCTTAAAC+AGG + Chr8:79251143-79251162 None:intergenic 35.0%
ATCGTTCGCAATATCAATCA+AGG + Chr8:79252201-79252220 None:intergenic 35.0%
ATCTTCTTCCTCTTCTTCTT+TGG - Chr8:79250595-79250614 MsG0880046868.01.T01:three_prime_UTR 35.0%
ATGGACACATATGAATGGAA+AGG - Chr8:79253552-79253571 MsG0880046868.01.T01:CDS 35.0%
ATGTCATTAGGTAATCCACT+TGG - Chr8:79252882-79252901 MsG0880046868.01.T01:intron 35.0%
ATTCAAATAGGCCAAATAGG+CGG - Chr8:79251063-79251082 MsG0880046868.01.T01:CDS 35.0%
ATTGATATTGCGAACGATTG+CGG - Chr8:79252203-79252222 MsG0880046868.01.T01:CDS 35.0%
CAAAGTCAAGTTACTCTTCT+TGG - Chr8:79250400-79250419 MsG0880046868.01.T01:three_prime_UTR 35.0%
CAAGAAGAGTAACTTGACTT+TGG + Chr8:79250402-79250421 None:intergenic 35.0%
CATTCCAAGTATCTGGTAAA+TGG + Chr8:79253588-79253607 None:intergenic 35.0%
CTAGGTTTATGTGGTTATGT+TGG - Chr8:79252332-79252351 MsG0880046868.01.T01:CDS 35.0%
CTATTTGCATTTGCCATCAA+AGG - Chr8:79252741-79252760 MsG0880046868.01.T01:intron 35.0%
GAAGAAAATGAGCAAAGTGT+TGG - Chr8:79251667-79251686 MsG0880046868.01.T01:intron 35.0%
GAATAAACCCAAAGAAGAAG+AGG + Chr8:79250606-79250625 None:intergenic 35.0%
GAGCATACGATATTTGATCA+TGG + Chr8:79252485-79252504 None:intergenic 35.0%
GATAGGGAAATTTCTCATGT+TGG + Chr8:79251248-79251267 None:intergenic 35.0%
GCAGGAATATTGAAAGGTTA+TGG - Chr8:79251283-79251302 MsG0880046868.01.T01:intron 35.0%
GGAAATAGACCTCAATAAAC+CGG + Chr8:79253294-79253313 None:intergenic 35.0%
GGAATATTGAAAGGTTATGG+AGG - Chr8:79251286-79251305 MsG0880046868.01.T01:intron 35.0%
GTCATTCAAATAGGCCAAAT+AGG - Chr8:79251060-79251079 MsG0880046868.01.T01:CDS 35.0%
GTTTACCAAATGCTTTATGC+TGG - Chr8:79253101-79253120 MsG0880046868.01.T01:intron 35.0%
GTTTATTGAGGTCTATTTCC+TGG - Chr8:79253294-79253313 MsG0880046868.01.T01:CDS 35.0%
TAGTACCTTCAAAGAAGAGA+AGG - Chr8:79251836-79251855 MsG0880046868.01.T01:CDS 35.0%
TCGCAAAGGCTATCTAAATT+TGG + Chr8:79251019-79251038 None:intergenic 35.0%
TCTGTATGGACACATATGAA+TGG - Chr8:79253547-79253566 MsG0880046868.01.T01:CDS 35.0%
TCTTCTTCCTCTTCTTCTTT+GGG - Chr8:79250596-79250615 MsG0880046868.01.T01:three_prime_UTR 35.0%
TGATGGCAAATGCAAATAGA+AGG + Chr8:79252740-79252759 None:intergenic 35.0%
TGGGTAAGACTCATATAAAC+TGG - Chr8:79252352-79252371 MsG0880046868.01.T01:CDS 35.0%
TGTCATTAGGTAATCCACTT+GGG - Chr8:79252883-79252902 MsG0880046868.01.T01:intron 35.0%
TGTGATGATTCTTCTTCTCA+TGG - Chr8:79251588-79251607 MsG0880046868.01.T01:intron 35.0%
TGTTACCAAAGGATAAGGAA+GGG + Chr8:79250575-79250594 None:intergenic 35.0%
TTGTTACCAAAGGATAAGGA+AGG + Chr8:79250576-79250595 None:intergenic 35.0%
! GCATAAAGCATTTGGTAAAC+GGG + Chr8:79253101-79253120 None:intergenic 35.0%
! GTCTTATCTTTCCTAGGTTT+TGG - Chr8:79250514-79250533 MsG0880046868.01.T01:three_prime_UTR 35.0%
! GTTTCAAGTGTTTCATGTGT+TGG - Chr8:79252984-79253003 MsG0880046868.01.T01:intron 35.0%
! TGGATAAAGTGTTCCTTTGA+TGG + Chr8:79252757-79252776 None:intergenic 35.0%
! TTCTACCGTGTCTTATGTTT+TGG - Chr8:79251561-79251580 MsG0880046868.01.T01:intron 35.0%
! TTGTGTCTGAACATTTTGTC+AGG - Chr8:79252070-79252089 MsG0880046868.01.T01:CDS 35.0%
! TTTCATCCAAGTTTCAAGTG+TGG - Chr8:79251483-79251502 MsG0880046868.01.T01:intron 35.0%
!! ATGGTATTGACAACTGAGAA+AGG - Chr8:79253489-79253508 MsG0880046868.01.T01:CDS 35.0%
!! CACTGGTTAAAGCTGATTTT+TGG - Chr8:79251893-79251912 MsG0880046868.01.T01:CDS 35.0%
!! GAAACCAAGAACTGATTTGA+AGG + Chr8:79250377-79250396 None:intergenic 35.0%
!! TGTTGGTCCAGATTGTTTTA+AGG - Chr8:79253001-79253020 MsG0880046868.01.T01:intron 35.0%
!!! CTTTACATTTTTTGAGGCAC+TGG - Chr8:79251876-79251895 MsG0880046868.01.T01:CDS 35.0%
!!! CTTTTTGGTTTGAAGCACTT+TGG - Chr8:79252843-79252862 MsG0880046868.01.T01:intron 35.0%
!!! GTTTTTTCAATTTCGTCGGA+CGG - Chr8:79252034-79252053 MsG0880046868.01.T01:CDS 35.0%
!!! TTTTTGGCTTCAATAGGTGT+GGG - Chr8:79253383-79253402 MsG0880046868.01.T01:CDS 35.0%
ACGTAACACTACTTGATCTG+AGG - Chr8:79250708-79250727 MsG0880046868.01.T01:exon 40.0%
AGCCACCAAAACATAAGACA+CGG + Chr8:79251569-79251588 None:intergenic 40.0%
ATCACTTGAACTACCAAGTG+CGG + Chr8:79251764-79251783 None:intergenic 40.0%
ATGACAGTGAAGCACAAAAC+AGG + Chr8:79251400-79251419 None:intergenic 40.0%
CAACTGTTCCTCTACTGATA+GGG + Chr8:79251264-79251283 None:intergenic 40.0%
CCACTGACACAACTTAATTG+AGG + Chr8:79252248-79252267 None:intergenic 40.0%
CCTTCCTTCAAATCAGTTCT+TGG - Chr8:79250370-79250389 MsG0880046868.01.T01:three_prime_UTR 40.0%
GAAAATGTTGGACTTCTTCC+TGG - Chr8:79250442-79250461 MsG0880046868.01.T01:three_prime_UTR 40.0%
GAAGAACTATCTCCAGTAAC+CGG + Chr8:79251445-79251464 None:intergenic 40.0%
GTCATTAGGTAATCCACTTG+GGG - Chr8:79252884-79252903 MsG0880046868.01.T01:intron 40.0%
GTTGATATGCTTCTTGCTGA+GGG - Chr8:79251802-79251821 MsG0880046868.01.T01:CDS 40.0%
TACCAAATGCTTTATGCTGG+CGG - Chr8:79253104-79253123 MsG0880046868.01.T01:intron 40.0%
TCCTGTTATTCCTTGCCATT+GGG - Chr8:79251371-79251390 MsG0880046868.01.T01:intron 40.0%
TGAAGGAAGGTGAGTAAAGT+GGG + Chr8:79250360-79250379 None:intergenic 40.0%
TGTTAACCATGCACAACTGT+TGG + Chr8:79251209-79251228 None:intergenic 40.0%
TGTTGATATGCTTCTTGCTG+AGG - Chr8:79251801-79251820 MsG0880046868.01.T01:CDS 40.0%
TTCCTGTTATTCCTTGCCAT+TGG - Chr8:79251370-79251389 MsG0880046868.01.T01:intron 40.0%
TTGAAGGAAGGTGAGTAAAG+TGG + Chr8:79250361-79250380 None:intergenic 40.0%
TTTGCAACAAATTCCCTCCT+TGG - Chr8:79250470-79250489 MsG0880046868.01.T01:three_prime_UTR 40.0%
! ATGAAAAGCATAAGCCAAGG+AGG + Chr8:79250487-79250506 None:intergenic 40.0%
! CCAATGAAAAGCATAAGCCA+AGG + Chr8:79250490-79250509 None:intergenic 40.0%
! CCTCAATTAAGTTGTGTCAG+TGG - Chr8:79252245-79252264 MsG0880046868.01.T01:CDS 40.0%
! CCTTGGCTTATGCTTTTCAT+TGG - Chr8:79250487-79250506 MsG0880046868.01.T01:three_prime_UTR 40.0%
! TCATAAAACATCGGCTACAG+AGG + Chr8:79253234-79253253 None:intergenic 40.0%
! TGAAAAGCATAAGCCAAGGA+GGG + Chr8:79250486-79250505 None:intergenic 40.0%
! TTAAGTTGTGTCAGTGGAAG+AGG - Chr8:79252251-79252270 MsG0880046868.01.T01:CDS 40.0%
! TTGGCAAAGCAACAAGGTTT+TGG - Chr8:79252954-79252973 MsG0880046868.01.T01:intron 40.0%
! TTTATGCTGGCGGTTCTTTT+AGG - Chr8:79253114-79253133 MsG0880046868.01.T01:intron 40.0%
!! ACTTGGGGCATTACTTTTCT+CGG - Chr8:79252899-79252918 MsG0880046868.01.T01:intron 40.0%
!! CACTACTTGATCTGAGGTTT+TGG - Chr8:79250714-79250733 MsG0880046868.01.T01:CDS 40.0%
!! CCAAGAACTGATTTGAAGGA+AGG + Chr8:79250373-79250392 None:intergenic 40.0%
!! CTTGGTGTTGCCAATGATAT+TGG - Chr8:79250418-79250437 MsG0880046868.01.T01:three_prime_UTR 40.0%
!! TACCGTGTCTTATGTTTTGG+TGG - Chr8:79251564-79251583 MsG0880046868.01.T01:intron 40.0%
!! TACTTTGTTGGTGTTGGAAC+TGG - Chr8:79251931-79251950 MsG0880046868.01.T01:CDS 40.0%
!! TTTTGGTGAGTTGAGTGAAG+TGG - Chr8:79250731-79250750 MsG0880046868.01.T01:CDS 40.0%
!!! GTTTTTGGCTTCAATAGGTG+TGG - Chr8:79253382-79253401 MsG0880046868.01.T01:CDS 40.0%
AAACAGGAATCCCAATGGCA+AGG + Chr8:79251384-79251403 None:intergenic 45.0%
AAGAAGAGAAGGCCTAGAAG+AGG - Chr8:79251847-79251866 MsG0880046868.01.T01:CDS 45.0%
ACCAAAGGATAAGGAAGGGA+GGG + Chr8:79250571-79250590 None:intergenic 45.0%
AGAAGAGAAGGCCTAGAAGA+GGG - Chr8:79251848-79251867 MsG0880046868.01.T01:CDS 45.0%
AGACCTCAATAAACCGGACA+TGG + Chr8:79253288-79253307 None:intergenic 45.0%
ATCAGTAGAGGAACAGTTGC+AGG - Chr8:79251265-79251284 MsG0880046868.01.T01:intron 45.0%
ATGTCATCCATACTGTCCGT+GGG + Chr8:79252689-79252708 None:intergenic 45.0%
ATTCCAAGAACTCCAACTGC+TGG + Chr8:79252777-79252796 None:intergenic 45.0%
CAAGGAGCGGTCTTCTTTAT+TGG + Chr8:79253190-79253209 None:intergenic 45.0%
CCGGTGGCATCATAAAACAT+CGG + Chr8:79253243-79253262 None:intergenic 45.0%
CTAGGCCTTCTCTTCTTTGA+AGG + Chr8:79251844-79251863 None:intergenic 45.0%
GAGAAAAGTAATGCCCCAAG+TGG + Chr8:79252900-79252919 None:intergenic 45.0%
GATCCATGTCCGGTTTATTG+AGG - Chr8:79253282-79253301 MsG0880046868.01.T01:intron 45.0%
GCAACTGTTCCTCTACTGAT+AGG + Chr8:79251265-79251284 None:intergenic 45.0%
GCACAAAACAGGAATCCCAA+TGG + Chr8:79251389-79251408 None:intergenic 45.0%
GCGTATATACGACAGTGAGT+TGG - Chr8:79252935-79252954 MsG0880046868.01.T01:intron 45.0%
GGAACACTTTATCCAGCAGT+TGG - Chr8:79252762-79252781 MsG0880046868.01.T01:intron 45.0%
GGAGTTCTTGGAATCTGCTA+CGG - Chr8:79252783-79252802 MsG0880046868.01.T01:intron 45.0%
GGTAGTTCAAGTGATGCTGA+TGG - Chr8:79251769-79251788 MsG0880046868.01.T01:intron 45.0%
GTAAAGTCTTCCCCTCTTCT+AGG + Chr8:79251862-79251881 None:intergenic 45.0%
GTATGGGTGCAAATAGCAGT+TGG - Chr8:79250319-79250338 MsG0880046868.01.T01:three_prime_UTR 45.0%
TAAAGAAGACCGCTCCTTGA+AGG - Chr8:79253191-79253210 MsG0880046868.01.T01:intron 45.0%
TACCAAAGGATAAGGAAGGG+AGG + Chr8:79250572-79250591 None:intergenic 45.0%
TAGTATAGCCGCATTGCAGT+AGG - Chr8:79252434-79252453 MsG0880046868.01.T01:CDS 45.0%
TATCCAGCAGTTGGAGTTCT+TGG - Chr8:79252771-79252790 MsG0880046868.01.T01:intron 45.0%
TCCCAATGGCAAGGAATAAC+AGG + Chr8:79251375-79251394 None:intergenic 45.0%
TCTTCTTCAGATACCGCACT+TGG - Chr8:79251748-79251767 MsG0880046868.01.T01:intron 45.0%
TCTTGTTCGTCCTTGTACTC+CGG - Chr8:79251423-79251442 MsG0880046868.01.T01:intron 45.0%
TGCAACAAACCTTCAAGGAG+CGG + Chr8:79253203-79253222 None:intergenic 45.0%
TTCAATAGGTGTGGGACTAC+TGG - Chr8:79253391-79253410 MsG0880046868.01.T01:CDS 45.0%
TTGCTACCAACAGTTGTGCA+TGG - Chr8:79251200-79251219 MsG0880046868.01.T01:intron 45.0%
! AACCGCCAGCATAAAGCATT+TGG + Chr8:79253109-79253128 None:intergenic 45.0%
! AGTGAGTTGGCAAAGCAACA+AGG - Chr8:79252948-79252967 MsG0880046868.01.T01:intron 45.0%
! CAAGTTTCAAGTGTGGCCTT+GGG - Chr8:79251490-79251509 MsG0880046868.01.T01:intron 45.0%
! CCGATGTTTTATGATGCCAC+CGG - Chr8:79253240-79253259 MsG0880046868.01.T01:intron 45.0%
! CCTACGGTTTCAGAGCTTTT+TGG - Chr8:79252828-79252847 MsG0880046868.01.T01:intron 45.0%
! GGTGCTGTCTTATCTTTCCT+AGG - Chr8:79250508-79250527 MsG0880046868.01.T01:three_prime_UTR 45.0%
!! CCAAAAAGCTCTGAAACCGT+AGG + Chr8:79252831-79252850 None:intergenic 45.0%
!! GAAACTCGGTGTCCTGTTTA+AGG - Chr8:79251128-79251147 MsG0880046868.01.T01:CDS 45.0%
!!! TCCTAGGTTTTGGTGTTCTC+TGG - Chr8:79250524-79250543 MsG0880046868.01.T01:three_prime_UTR 45.0%
!! TAAATGAATAAATATAATAA+TGG + Chr8:79250879-79250898 None:intergenic 5.0%
AAACGATCCCACGGACAGTA+TGG - Chr8:79252679-79252698 MsG0880046868.01.T01:intron 50.0%
AGCAGTTGAGGATCCATGTC+CGG - Chr8:79253272-79253291 MsG0880046868.01.T01:intron 50.0%
AGGACTTGGAGCTGCAGTAT+GGG - Chr8:79250303-79250322 MsG0880046868.01.T01:three_prime_UTR 50.0%
ATGCTTCTTGCTGAGGGTGA+AGG - Chr8:79251808-79251827 MsG0880046868.01.T01:CDS 50.0%
CAACGTCTCCTACTGCAATG+CGG + Chr8:79252445-79252464 None:intergenic 50.0%
CATGTCATCCATACTGTCCG+TGG + Chr8:79252690-79252709 None:intergenic 50.0%
CCAAGGCCACACTTGAAACT+TGG + Chr8:79251492-79251511 None:intergenic 50.0%
CTCACTGTCGTATATACGCC+CGG + Chr8:79252934-79252953 None:intergenic 50.0%
GAAGAGAAGGCCTAGAAGAG+GGG - Chr8:79251849-79251868 MsG0880046868.01.T01:CDS 50.0%
GCAGGAAGAAAACGATCCCA+CGG - Chr8:79252670-79252689 MsG0880046868.01.T01:CDS 50.0%
GCAGTAATACACAGCAGACC+AGG + Chr8:79253315-79253334 None:intergenic 50.0%
GCCAGAGAACACCAAAACCT+AGG + Chr8:79250528-79250547 None:intergenic 50.0%
TAGGACTTGGAGCTGCAGTA+TGG - Chr8:79250302-79250321 MsG0880046868.01.T01:three_prime_UTR 50.0%
TCCCTCCCTTCCTTATCCTT+TGG - Chr8:79250567-79250586 MsG0880046868.01.T01:three_prime_UTR 50.0%
TCTCCAGTAACCGGAGTACA+AGG + Chr8:79251436-79251455 None:intergenic 50.0%
TTCAATTTCGTCGGACGGCT+TGG - Chr8:79252039-79252058 MsG0880046868.01.T01:CDS 50.0%
! CCAAGTTTCAAGTGTGGCCT+TGG - Chr8:79251489-79251508 MsG0880046868.01.T01:intron 50.0%
! CTTTTCTCGGCTCTTCTTGC+CGG - Chr8:79252912-79252931 MsG0880046868.01.T01:intron 50.0%
! TTTTCTCGGCTCTTCTTGCC+GGG - Chr8:79252913-79252932 MsG0880046868.01.T01:intron 50.0%
AGACCACCATGGGTAGGACT+TGG - Chr8:79250289-79250308 MsG0880046868.01.T01:three_prime_UTR 55.0%
AGGGAGGAACAAGACCACCA+TGG - Chr8:79250278-79250297 MsG0880046868.01.T01:three_prime_UTR 55.0%
CGCATTGCAGTAGGAGACGT+TGG - Chr8:79252443-79252462 MsG0880046868.01.T01:CDS 55.0%
CGTCCTTGTACTCCGGTTAC+TGG - Chr8:79251430-79251449 MsG0880046868.01.T01:intron 55.0%
GGAACAAGACCACCATGGGT+AGG - Chr8:79250283-79250302 MsG0880046868.01.T01:three_prime_UTR 55.0%
GGACATGGATCCTCAACTGC+TGG + Chr8:79253273-79253292 None:intergenic 55.0%
GGGAGGAACAAGACCACCAT+GGG - Chr8:79250279-79250298 MsG0880046868.01.T01:three_prime_UTR 55.0%
GTAGGAGACGTTGGCGCAAT+TGG - Chr8:79252452-79252471 MsG0880046868.01.T01:CDS 55.0%
! AATTTCGTCGGACGGCTTGG+TGG - Chr8:79252042-79252061 MsG0880046868.01.T01:CDS 55.0%
! CTTGCTGCTGTTTGTGCTGC+TGG - Chr8:79253038-79253057 MsG0880046868.01.T01:intron 55.0%
!! GCTCAAGTAGGTGCTGCTCA+AGG - Chr8:79251976-79251995 MsG0880046868.01.T01:CDS 55.0%
GCAGCTCCAAGTCCTACCCA+TGG + Chr8:79250298-79250317 None:intergenic 60.0%
GCTCCAAGTCCTACCCATGG+TGG + Chr8:79250295-79250314 None:intergenic 60.0%
! CTCAACTGCTGGTCTGCAGC+CGG + Chr8:79253262-79253281 None:intergenic 60.0%
CGGCTGCAGACCAGCAGTTG+AGG - Chr8:79253260-79253279 MsG0880046868.01.T01:intron 65.0%
! AACTGCTGGTCTGCAGCCGG+TGG + Chr8:79253259-79253278 None:intergenic 65.0%
!! TTCGTCGGACGGCTTGGTGG+AGG - Chr8:79252045-79252064 MsG0880046868.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 79250265 79253609 79250265 ID=MsG0880046868.01;Name=MsG0880046868.01
Chr8 mRNA 79250265 79253609 79250265 ID=MsG0880046868.01.T01;Parent=MsG0880046868.01;Name=MsG0880046868.01.T01;_AED=0.31;_eAED=0.31;_QI=0|1|0.66|1|1|1|3|449|573
Chr8 exon 79250265 79251200 79250265 ID=MsG0880046868.01.T01:exon:34269;Parent=MsG0880046868.01.T01
Chr8 exon 79251783 79252693 79251783 ID=MsG0880046868.01.T01:exon:34268;Parent=MsG0880046868.01.T01
Chr8 exon 79253286 79253609 79253286 ID=MsG0880046868.01.T01:exon:34267;Parent=MsG0880046868.01.T01
Chr8 CDS 79253286 79253609 79253286 ID=MsG0880046868.01.T01:cds;Parent=MsG0880046868.01.T01
Chr8 CDS 79251783 79252693 79251783 ID=MsG0880046868.01.T01:cds;Parent=MsG0880046868.01.T01
Chr8 CDS 79250714 79251200 79250714 ID=MsG0880046868.01.T01:cds;Parent=MsG0880046868.01.T01
Chr8 three_prime_UTR 79250265 79250713 79250265 ID=MsG0880046868.01.T01:three_prime_utr;Parent=MsG0880046868.01.T01
Gene Sequence

>MsG0880046868.01.T01

ATGTTGAAGGTGAAGGGAGGAACAAGACCACCATGGGTAGGACTTGGAGCTGCAGTATGGGTGCAAATAGCAGTTGGAAATGCTTACACATTCCCACTTTACTCACCTTCCTTCAAATCAGTTCTTGGTTTCAACCAAAGTCAAGTTACTCTTCTTGGTGTTGCCAATGATATTGGTGAAAATGTTGGACTTCTTCCTGGTATTGTTTGCAACAAATTCCCTCCTTGGCTTATGCTTTTCATTGGTGCTGTCTTATCTTTCCTAGGTTTTGGTGTTCTCTGGCTCTCTGTCTCAAACACACTTCCCTCCCTTCCTTATCCTTTGCTATGGTTTGCACTTGTTATTGCTACCAACAGTTGTGCATGGTTAACAACTGCTATTCTTGTGACCAACATGAGAAATTTCCCTATCAGTAGAGGAACAGTTGCAGGAATATTGAAAGGTTATGGAGGAATCAGTGCTGCAGTTTTCACCGAAATATTTAGGGCAATTCTTCATAATTCATCTTCTAATTTCCTGTTATTCCTTGCCATTGGGATTCCTGTTTTGTGCTTCACTGTCATGTTTCTTGTTCGTCCTTGTACTCCGGTTACTGGAGATAGTTCTTCAGAAAAATGGCATTTTCTTTTCATCCAAGTTTCAAGTGTGGCCTTGGGTGTATATTTACTTGTAACAACCACACTTGATTACATTCTACATATAAATTCTACCGTGTCTTATGTTTTGGTGGCTGTGATGATTCTTCTTCTCATGGCTCCATTTGCTATCCCTATAAAGATGACATTGTTTCCCCAAAAAATCAATGAATCAGAAGAAAATGAGCAAAGTGTTGGATCTTCTGATTGTTTGATTCAAGAAGGCAAAGAAGAAAACAGAAAACCCCTTTTACAATCTTCTTCAGATACCGCACTTGGTAGTTCAAGTGATGCTGATGGCTCATCTGATGTTGATATGCTTCTTGCTGAGGGTGAAGGAGCAGTAGTACCTTCAAAGAAGAGAAGGCCTAGAAGAGGGGAAGACTTTACATTTTTTGAGGCACTGGTTAAAGCTGATTTTTGGCTGTTATTTTTTGTATACTTTGTTGGTGTTGGAACTGGTGTTACTGTTATTAATAATCTGGCTCAAGTAGGTGCTGCTCAAGGTGTTGAAGATATCACTATCTTACTATCAGTTTTCAGTTTTTTCAATTTCGTCGGACGGCTTGGTGGAGGAGTTGTGTCTGAACATTTTGTCAGGAAGAAAACGATCCCACGGACAGTATGGATGACATGCACCCAGATAGTTATGATAATCTTGTACCTTCTATTTGCATTTGCCATCAAAGGAACACTTTATCCAGCAGTTGGAGTTCTTGGAATCTGCTACGGAGTGCAATTTTCAATATTGATTCCTACGGTTTCAGAGCTTTTTGGTTTGAAGCACTTTGGCTTATTTTTCAACTTCATGTCATTAGGTAATCCACTTGGGGCATTACTTTTCTCGGCTCTTCTTGCCGGGCGTATATACGACAGTGAGTTGGCAAAGCAACAAGGTTTTGGTCTCATTGTTTCAAGTGTTTCATGTGTTGGTCCAGATTGTTTTAAGGTTACTTTTTTGGTACTTGCTGCTGTTTGTGCTGCTGGCGCCATTTCCAGCATTATCTTGACTATAAGAATTAAGCCCGTTTACCAAATGCTTTATGCTGGCGGTTCTTTTAGGCTACCTCAAATGTCATGCAATTAA
Protein sequence

>MsG0880046868.01.T01

MLKVKGGTRPPWVGLGAAVWVQIAVGNAYTFPLYSPSFKSVLGFNQSQVTLLGVANDIGENVGLLPGIVCNKFPPWLMLFIGAVLSFLGFGVLWLSVSNTLPSLPYPLLWFALVIATNSCAWLTTAILVTNMRNFPISRGTVAGILKGYGGISAAVFTEIFRAILHNSSSNFLLFLAIGIPVLCFTVMFLVRPCTPVTGDSSSEKWHFLFIQVSSVALGVYLLVTTTLDYILHINSTVSYVLVAVMILLLMAPFAIPIKMTLFPQKINESEENEQSVGSSDCLIQEGKEENRKPLLQSSSDTALGSSSDADGSSDVDMLLAEGEGAVVPSKKRRPRRGEDFTFFEALVKADFWLLFFVYFVGVGTGVTVINNLAQVGAAQGVEDITILLSVFSFFNFVGRLGGGVVSEHFVRKKTIPRTVWMTCTQIVMIILYLLFAFAIKGTLYPAVGVLGICYGVQFSILIPTVSELFGLKHFGLFFNFMSLGNPLGALLFSALLAGRIYDSELAKQQGFGLIVSSVSCVGPDCFKVTFLVLAAVCAAGAISSIILTIRIKPVYQMLYAGGSFRLPQMSCN*