AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025112.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025112.01.T01 MTR_5g022380 97.393 537 14 0 1 537 1 537 0.0 1070
MsG0580025112.01.T01 MTR_5g022380 97.424 427 11 0 111 537 1 427 0.0 850
MsG0580025112.01.T01 MTR_4g073690 63.498 526 182 4 11 526 13 538 0.0 670
MsG0580025112.01.T01 MTR_4g073690 60.995 382 139 4 11 382 13 394 6.35e-160 461
MsG0580025112.01.T01 MTR_2g450710 36.563 547 309 6 14 525 13 556 1.42e-111 343
MsG0580025112.01.T01 MTR_4g116210 34.720 553 318 7 14 525 12 562 1.35e-106 330
MsG0580025112.01.T01 MTR_7g029015 33.741 572 316 6 12 525 14 580 1.27e-105 328
MsG0580025112.01.T01 MTR_3g099150 35.305 558 313 12 7 525 9 557 7.31e-101 315
MsG0580025112.01.T01 MTR_5g090570 34.717 530 324 8 12 528 10 530 9.11e-97 304
MsG0580025112.01.T01 MTR_2g100400 31.760 551 329 10 8 528 2 535 2.46e-91 290
MsG0580025112.01.T01 MTR_1g059080 31.475 556 342 9 13 535 24 573 1.06e-87 282
MsG0580025112.01.T01 MTR_1g111540 32.413 543 333 9 8 522 21 557 3.57e-87 281
MsG0580025112.01.T01 MTR_1g111510 32.965 543 330 8 8 522 21 557 3.59e-87 281
MsG0580025112.01.T01 MTR_1g111550 33.752 557 323 11 13 536 25 568 6.98e-87 280
MsG0580025112.01.T01 MTR_1g111530 32.717 541 324 9 13 522 22 553 1.05e-86 279
MsG0580025112.01.T01 MTR_7g102880 30.896 547 335 7 13 522 29 569 7.08e-84 273
MsG0580025112.01.T01 MTR_1g050550 31.319 546 334 9 13 522 24 564 8.46e-84 272
MsG0580025112.01.T01 MTR_7g083660 31.922 567 337 16 11 536 5 563 3.25e-76 251
MsG0580025112.01.T01 MTR_5g026350 31.469 572 337 15 11 534 5 569 3.53e-74 246
MsG0580025112.01.T01 MTR_8g071920 30.998 571 343 13 11 535 46 611 1.20e-73 246
MsG0580025112.01.T01 MTR_3g466040 30.593 523 340 9 13 525 7 516 4.20e-65 220
MsG0580025112.01.T01 MTR_3g466110 30.103 485 323 7 13 491 7 481 2.14e-61 210
MsG0580025112.01.T01 MTR_2g104250 28.963 328 172 8 236 537 12 304 1.33e-39 146
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025112.01.T01 AT4G34950 62.364 550 179 5 11 533 14 562 0.0 705
MsG0580025112.01.T01 AT2G16660 64.436 523 179 2 10 525 11 533 0.0 685
MsG0580025112.01.T01 AT2G16660 62.368 380 136 2 10 382 11 390 3.66e-163 469
MsG0580025112.01.T01 AT1G80530 34.783 552 328 9 1 525 1 547 1.69e-109 338
MsG0580025112.01.T01 AT5G14120 36.861 567 306 6 8 525 11 574 2.44e-109 338
MsG0580025112.01.T01 AT3G01930 35.813 578 304 7 7 525 10 579 2.75e-108 335
MsG0580025112.01.T01 AT5G50520 35.227 528 320 8 12 525 15 534 4.32e-105 326
MsG0580025112.01.T01 AT5G50630 35.227 528 320 8 12 525 15 534 4.32e-105 326
MsG0580025112.01.T01 AT2G28120 35.110 544 316 8 8 522 12 547 3.21e-102 319
MsG0580025112.01.T01 AT2G39210 35.240 542 313 10 13 522 21 556 6.56e-100 314
MsG0580025112.01.T01 AT1G74780 33.148 540 320 9 13 528 7 529 3.47e-91 289
MsG0580025112.01.T01 AT2G34350 32.721 544 324 8 8 530 2 524 6.11e-88 281
MsG0580025112.01.T01 AT2G34350 32.721 544 324 8 8 530 2 524 6.11e-88 281
MsG0580025112.01.T01 AT1G18940 31.667 540 311 9 13 524 9 518 1.20e-85 275
MsG0580025112.01.T01 AT2G34355 31.520 533 333 7 13 530 7 522 3.90e-81 263
MsG0580025112.01.T01 AT3G01930 35.021 474 241 7 111 525 1 466 3.06e-78 254
MsG0580025112.01.T01 AT3G01630 30.147 544 338 12 12 528 22 550 2.25e-74 246
MsG0580025112.01.T01 AT3G01630 30.147 544 338 12 12 528 40 568 4.44e-74 246
MsG0580025112.01.T01 AT1G31470 31.157 536 342 11 12 528 42 569 5.72e-70 235
MsG0580025112.01.T01 AT4G19450 31.393 567 333 15 11 528 5 564 4.52e-69 233
MsG0580025112.01.T01 AT3G01930 33.641 434 228 6 7 388 10 435 1.51e-68 227
MsG0580025112.01.T01 AT5G45275 30.442 565 339 14 11 528 5 562 9.98e-68 229
MsG0580025112.01.T01 AT2G30300 30.561 517 326 9 14 523 8 498 4.26e-65 220
MsG0580025112.01.T01 AT4G19450 31.731 416 233 12 11 382 5 413 1.73e-55 192
MsG0580025112.01.T01 AT2G34355 29.639 388 249 6 150 530 2 372 6.70e-48 171

Find 141 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTGGACGCATTCTTTC+TGG 0.067041 5:-13985433 MsG0580025112.01.T01:CDS
CACTGAGATCATGGTGTTTC+TGG 0.102764 5:-13984198 MsG0580025112.01.T01:exon
TCTTATGATTGGTGCTATTA+TGG 0.122465 5:-13986985 MsG0580025112.01.T01:CDS
TCATTTCATTCATAAGTATT+TGG 0.123881 5:-13985459 MsG0580025112.01.T01:CDS
ACTTCTTGTTCCTTTATATT+TGG 0.160234 5:-13985770 MsG0580025112.01.T01:CDS
GAATATCCCCTCTTCCTTAT+TGG 0.177151 5:-13986920 MsG0580025112.01.T01:CDS
CATGCTTGTGTATGTGATTA+TGG 0.186967 5:-13984331 MsG0580025112.01.T01:CDS
GATGTTGGATGCATTCTTTC+TGG 0.207315 5:-13983698 MsG0580025112.01.T01:three_prime_UTR
CATTTCATTCATAAGTATTT+GGG 0.219467 5:-13985458 MsG0580025112.01.T01:CDS
AGCTCTCTCTCCATCTTATT+TGG 0.219772 5:+13983804 None:intergenic
CCCTTTAGAATGCCGGAAAT+TGG 0.239061 5:+13986105 None:intergenic
ATGGCTTTCGCTTGTGTATT+GGG 0.254616 5:-13984312 MsG0580025112.01.T01:CDS
GTTCTGATTTCCAACCATTT+TGG 0.271480 5:+13983959 None:intergenic
ATAAGTATTTGGGGTTTCTT+TGG 0.277285 5:-13985448 MsG0580025112.01.T01:CDS
AAAGATGTTGGTAAAGCTTT+TGG 0.279837 5:-13987053 MsG0580025112.01.T01:CDS
ATTATGGGATTCATTGGTTA+TGG 0.282873 5:-13986969 MsG0580025112.01.T01:CDS
CTTATGATTGGTGCTATTAT+GGG 0.287517 5:-13986984 MsG0580025112.01.T01:CDS
TCTCAGATTCTGATGTTCTT+TGG 0.295006 5:-13984624 MsG0580025112.01.T01:CDS
CTCATTCTTAACCTTCCTAT+TGG 0.296648 5:-13984453 MsG0580025112.01.T01:CDS
CTATTTGGTCTCAAATACTA+TGG 0.305461 5:-13984492 MsG0580025112.01.T01:CDS
GTTATGTTTACCAGCCAATA+AGG 0.305623 5:+13986906 None:intergenic
CAGGCATGCCAAGGTTAGTT+TGG 0.310026 5:-13984656 MsG0580025112.01.T01:CDS
ATTAAACGAAAACCAGTTAT+AGG 0.318415 5:-13985631 MsG0580025112.01.T01:CDS
CTCTTGGCATTTGATATCTC+TGG 0.323684 5:-13985856 MsG0580025112.01.T01:CDS
GCAGCAGCTTCAGAACTATT+TGG 0.325560 5:-13984507 MsG0580025112.01.T01:CDS
AAGGAAGAGGGGATATTCTT+TGG 0.328395 5:+13986925 None:intergenic
TTACCAGGATCACTATATAT+TGG 0.329554 5:-13984579 MsG0580025112.01.T01:CDS
GTATGCTCTTCTCCTATAAC+TGG 0.339891 5:+13985619 None:intergenic
TATGGCTTTCGCTTGTGTAT+TGG 0.340093 5:-13984313 MsG0580025112.01.T01:CDS
ATTTCTGTCTATATGTATCT+TGG 0.344487 5:+13984242 None:intergenic
TTTCTCTGTGGTGTTGGAAC+AGG 0.349477 5:-13985547 MsG0580025112.01.T01:CDS
ACTTCAGTTATTCTTATGAT+TGG 0.350491 5:-13986996 MsG0580025112.01.T01:CDS
CAAGAAGTGGCATAGCTAAT+AGG 0.363471 5:+13985785 None:intergenic
TATATTGGTTCAATCTTAGT+AGG 0.367284 5:-13984564 MsG0580025112.01.T01:CDS
GATGTGTATATTCTTGTGTA+TGG 0.373027 5:-13986202 MsG0580025112.01.T01:CDS
TCATAAACATGTTATTTCAT+TGG 0.374079 5:-13985830 MsG0580025112.01.T01:CDS
TTGAATACGACCAAATATAA+AGG 0.374709 5:+13985760 None:intergenic
TGCTTGTTTGGCTCTATTGT+GGG 0.377342 5:-13984097 MsG0580025112.01.T01:three_prime_UTR
TGAACCTTTGTTGGCACAAA+AGG 0.386700 5:-13985701 MsG0580025112.01.T01:CDS
GGTGCTATTATGGGATTCAT+TGG 0.388521 5:-13986975 MsG0580025112.01.T01:CDS
CTTGTCGACCGCTACCAAAA+TGG 0.394461 5:-13983973 MsG0580025112.01.T01:three_prime_UTR
GACAGTAGCTATTTATCTCT+TGG 0.396797 5:-13985872 MsG0580025112.01.T01:CDS
TTGTTCTAAATGCAAGAAAC+AGG 0.408668 5:+13984277 None:intergenic
ATCTTAGTAGGAATATGTTA+TGG 0.410113 5:-13984552 MsG0580025112.01.T01:CDS
TCCAATTTCCGGCATTCTAA+AGG 0.410577 5:-13986106 MsG0580025112.01.T01:CDS
ACATATTGCTTGTACCCATA+TGG 0.411307 5:+13987166 None:intergenic
AGCATTAATAGAAACTTAGA+TGG 0.417468 5:+13986021 None:intergenic
CCAATTTCCGGCATTCTAAA+GGG 0.419855 5:-13986105 MsG0580025112.01.T01:CDS
TTCAATATCATAAAGGTATC+CGG 0.421548 5:+13984404 None:intergenic
GTGTCATTTCTCTGTGGTGT+TGG 0.422085 5:-13985553 MsG0580025112.01.T01:CDS
ACAGGTTCATGAACCTTTGT+TGG 0.424667 5:-13985710 MsG0580025112.01.T01:CDS
GATGAATAACTTGGGACAAA+TGG 0.427374 5:-13985515 MsG0580025112.01.T01:CDS
AGATGTGTTAAAGTCTCTAA+TGG 0.430909 5:-13987114 MsG0580025112.01.T01:CDS
TGGTTGGGGTGCAGGCCTAT+TGG 0.430920 5:-13983876 MsG0580025112.01.T01:three_prime_UTR
ATCATAAGAATAACTGAAGT+TGG 0.438681 5:+13986999 None:intergenic
GTGCTTGTTTGGCTCTATTG+TGG 0.438785 5:-13984098 MsG0580025112.01.T01:three_prime_UTR
GTGCAAGTGTTTCCGCCTCC+TGG 0.444901 5:+13984369 None:intergenic
TGAAGTGATGGTTGGGGTGC+AGG 0.445480 5:-13983884 MsG0580025112.01.T01:three_prime_UTR
TAGGATTTGTGACAGCCATA+TGG 0.447435 5:-13987181 MsG0580025112.01.T01:CDS
CAGGTCTTGTTTCTGATCGT+TGG 0.448059 5:-13987022 MsG0580025112.01.T01:CDS
TTGGGGTGCAGGCCTATTGG+AGG 0.457985 5:-13983873 MsG0580025112.01.T01:three_prime_UTR
GAAAAGATGAATGAACCAAT+AGG 0.463266 5:+13984438 None:intergenic
ATCCCCTCTTCCTTATTGGC+TGG 0.463390 5:-13986916 MsG0580025112.01.T01:intron
ACAAGATTGAAGTGATGGTT+GGG 0.464901 5:-13983891 MsG0580025112.01.T01:three_prime_UTR
ATGAATAACTTGGGACAAAT+GGG 0.466370 5:-13985514 MsG0580025112.01.T01:CDS
TTCGCTTGTGTATTGGGGTG+TGG 0.467433 5:-13984306 MsG0580025112.01.T01:CDS
AGAGCATACTATCATTGAAA+TGG 0.467872 5:-13985605 MsG0580025112.01.T01:CDS
CAAGTTCAACACTGAGATCA+TGG 0.469511 5:-13984207 MsG0580025112.01.T01:exon
GCCTATTGGAGGGTCGTGAC+AGG 0.472466 5:-13983862 MsG0580025112.01.T01:three_prime_UTR
TCCTGTCACGACCCTCCAAT+AGG 0.479099 5:+13983861 None:intergenic
ACAAAAGGTTTCAGAAGTAA+AGG 0.484351 5:-13985686 MsG0580025112.01.T01:CDS
TAGTGGCTTCAATATCATAA+AGG 0.484536 5:+13984397 None:intergenic
TGGTTACATTGCATTGGCAA+TGG 0.486214 5:-13984604 MsG0580025112.01.T01:CDS
CACTCTCTGAATACTACATC+AGG 0.489900 5:-13985408 MsG0580025112.01.T01:intron
GCATTGGCAATGGCCTTACC+AGG 0.490266 5:-13984594 MsG0580025112.01.T01:CDS
GAACCAATATATAGTGATCC+TGG 0.491333 5:+13984576 None:intergenic
AATGAAATAACATGTTTATG+AGG 0.496120 5:+13985832 None:intergenic
AAAGGTTATGCCAAATAAGA+TGG 0.500082 5:-13983814 MsG0580025112.01.T01:three_prime_UTR
GGAGGCGGAAACACTTGCAC+TGG 0.501570 5:-13984366 MsG0580025112.01.T01:CDS
AATCTCAACTTCCTCTACCT+TGG 0.507298 5:+13985651 None:intergenic
TACATAGCCCTTTAGAATGC+CGG 0.507305 5:+13986098 None:intergenic
TACAAGATTGAAGTGATGGT+TGG 0.512393 5:-13983892 MsG0580025112.01.T01:three_prime_UTR
GATCTTGCAACGAAGGTACT+AGG 0.512457 5:-13983774 MsG0580025112.01.T01:three_prime_UTR
TCTTCTGTAGAAGTTGAAGC+TGG 0.513323 5:+13985940 None:intergenic
AGGATTTGTGACAGCCATAT+GGG 0.515315 5:-13987180 MsG0580025112.01.T01:CDS
GGACAAATGGGACAGGCACT+TGG 0.515436 5:-13985502 MsG0580025112.01.T01:CDS
TGAAGTTGAGGCAAAGATGT+TGG 0.515761 5:-13983713 MsG0580025112.01.T01:three_prime_UTR
TTGTGTATTGGGGTGTGGAT+TGG 0.519733 5:-13984301 MsG0580025112.01.T01:CDS
CTCTCTGTTGCTAAAGATGT+TGG 0.521493 5:-13987065 MsG0580025112.01.T01:CDS
GTTCTTTGGTTACATTGCAT+TGG 0.523788 5:-13984610 MsG0580025112.01.T01:CDS
AAATAAGATGGAGAGAGAGC+TGG 0.523891 5:-13983802 MsG0580025112.01.T01:three_prime_UTR
TCATTGGTTATGGAGCTCAA+TGG 0.539555 5:-13986959 MsG0580025112.01.T01:CDS
AATATATAGTGATCCTGGTA+AGG 0.541574 5:+13984581 None:intergenic
ATGTGTATATTCTTGTGTAT+GGG 0.545839 5:-13986201 MsG0580025112.01.T01:CDS
GCAAAGTAGTCATCCTAGGC+AGG 0.552574 5:-13983916 MsG0580025112.01.T01:three_prime_UTR
AGAGACATGTACCAAGGTAG+AGG 0.555739 5:-13985662 MsG0580025112.01.T01:CDS
AATAGTTCTGAAGCTGCTGC+TGG 0.557803 5:+13984510 None:intergenic
AAATGAACAAAGAAACATCA+TGG 0.557965 5:+13985476 None:intergenic
AGGATACAAGATTGAAGTGA+TGG 0.560959 5:-13983896 MsG0580025112.01.T01:three_prime_UTR
GCAATGAGACAAATGATAGC+AGG 0.561934 5:+13985988 None:intergenic
TTCAATCTTGTATCCTGCCT+AGG 0.562331 5:+13983903 None:intergenic
ACTAAAACTACGCGCGGATG+CGG 0.562643 5:-13983938 MsG0580025112.01.T01:three_prime_UTR
CAATAGGAAGGTTAAGAATG+AGG 0.565069 5:+13984454 None:intergenic
ATTGAAGCCACTAGTGTACC+AGG 0.566378 5:-13984387 MsG0580025112.01.T01:CDS
TCGACCGCTACCAAAATGGT+TGG 0.569278 5:-13983969 MsG0580025112.01.T01:three_prime_UTR
TCTGTAGAAGTTGAAGCTGG+TGG 0.571451 5:+13985943 None:intergenic
GCCACTAGTGTACCAGGAGG+CGG 0.573885 5:-13984381 MsG0580025112.01.T01:CDS
AGGTACTAGGCACAAAGCAA+TGG 0.574823 5:-13983761 MsG0580025112.01.T01:three_prime_UTR
TGCGGCAAAGTAGTCATCCT+AGG 0.575745 5:-13983920 MsG0580025112.01.T01:three_prime_UTR
TTTACCAGCCAATAAGGAAG+AGG 0.577066 5:+13986912 None:intergenic
GGCATTCTAAAGGGCTATGT+AGG 0.579833 5:-13986096 MsG0580025112.01.T01:CDS
AAGCTGGTGGAGTTTCATGA+AGG 0.580336 5:+13985956 None:intergenic
TCCGCCTCCTGGTACACTAG+TGG 0.580549 5:+13984380 None:intergenic
TGGGGTGCAGGCCTATTGGA+GGG 0.581158 5:-13983872 MsG0580025112.01.T01:three_prime_UTR
ATTTCATTCATAAGTATTTG+GGG 0.583874 5:-13985457 MsG0580025112.01.T01:CDS
AAATATAAAGGAACAAGAAG+TGG 0.584319 5:+13985772 None:intergenic
ATATGGGTACAAGCAATATG+TGG 0.584975 5:-13987164 MsG0580025112.01.T01:CDS
GCTGCGTTCCAAACTAACCT+TGG 0.585421 5:+13984648 None:intergenic
TGGCTTTCGCTTGTGTATTG+GGG 0.591806 5:-13984311 MsG0580025112.01.T01:CDS
TCATCTTGAAAATGAAGTTG+AGG 0.595034 5:-13983725 MsG0580025112.01.T01:three_prime_UTR
TGTATATTCTTGTGTATGGG+TGG 0.598397 5:-13986198 MsG0580025112.01.T01:CDS
TAACTTGGGACAAATGGGAC+AGG 0.599118 5:-13985509 MsG0580025112.01.T01:CDS
GCTCAAACTTGAGTTTGCAA+TGG 0.606331 5:-13984072 MsG0580025112.01.T01:three_prime_UTR
TTACCAGCCAATAAGGAAGA+GGG 0.606426 5:+13986913 None:intergenic
TAGAAACTTAGATGGGTCTG+AGG 0.614102 5:+13986029 None:intergenic
GCAGAAAATCAGGCATGCCA+AGG 0.615589 5:-13984665 MsG0580025112.01.T01:intron
AGATGAATGAACCAATAGGA+AGG 0.629288 5:+13984442 None:intergenic
TTGTTTGTGTCATTTCTCTG+TGG 0.636758 5:-13985559 MsG0580025112.01.T01:CDS
CAAGATTGAAGTGATGGTTG+GGG 0.642966 5:-13983890 MsG0580025112.01.T01:three_prime_UTR
CAAATAATATATGAGAATCG+AGG 0.648881 5:+13983625 None:intergenic
GCATTAATAGAAACTTAGAT+GGG 0.651110 5:+13986022 None:intergenic
ACTATGTGTGATGAATAACT+TGG 0.651334 5:-13985524 MsG0580025112.01.T01:CDS
GGAGTGTGATCTTGCAACGA+AGG 0.654551 5:-13983781 MsG0580025112.01.T01:three_prime_UTR
ATCAGAACTAAAACTACGCG+CGG 0.654674 5:-13983944 MsG0580025112.01.T01:three_prime_UTR
AAAGGAAGAGACATGTACCA+AGG 0.656240 5:-13985668 MsG0580025112.01.T01:CDS
TACCAGCCAATAAGGAAGAG+GGG 0.660022 5:+13986914 None:intergenic
CTATGTGTGATGAATAACTT+GGG 0.685471 5:-13985523 MsG0580025112.01.T01:CDS
TGGGTGGAAACAGCACAACA+TGG 0.685598 5:-13986182 MsG0580025112.01.T01:CDS
GAATGCCGGAAATTGGACCA+CGG 0.691049 5:+13986112 None:intergenic
ACACATTGACAATACCTATG+CGG 0.733026 5:+13984167 None:intergenic
GAAGCCACTAGTGTACCAGG+AGG 0.777264 5:-13984384 MsG0580025112.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTGAAGTTTTTTAAATAAT+AGG - Chr5:13986989-13987008 MsG0580025112.01.T01:CDS 10.0%
!!! TTAATATAAACATAGTTTTA+AGG - Chr5:13985500-13985519 MsG0580025112.01.T01:CDS 10.0%
!!! TTGAAGTTTTTTAAATAATA+GGG - Chr5:13986990-13987009 MsG0580025112.01.T01:CDS 10.0%
!! AATCAAACATCATAAAAATA+TGG + Chr5:13986796-13986815 None:intergenic 15.0%
!! ATAATATAAAGTGAAATTCT+TGG + Chr5:13984448-13984467 None:intergenic 15.0%
!! ATCAAATTAAACTCTAAATA+AGG + Chr5:13983954-13983973 None:intergenic 15.0%
!! CATATAAAATTAAACATTCA+AGG + Chr5:13986143-13986162 None:intergenic 15.0%
!! TTGATTATAAGTTTATAACT+AGG - Chr5:13986068-13986087 MsG0580025112.01.T01:CDS 15.0%
!!! ATAATCAAGATTTTAAAATG+TGG + Chr5:13986056-13986075 None:intergenic 15.0%
!!! CTTGAATGTTTAATTTTATA+TGG - Chr5:13986141-13986160 MsG0580025112.01.T01:CDS 15.0%
!!! TGAAGTTTTTTAAATAATAG+GGG - Chr5:13986991-13987010 MsG0580025112.01.T01:CDS 15.0%
!! AATGAAATAACATGTTTATG+AGG + Chr5:13984999-13985018 None:intergenic 20.0%
!! ACCAATTTATTTGATTACTT+TGG - Chr5:13984591-13984610 MsG0580025112.01.T01:CDS 20.0%
!! ATTGATTATTTGCAATGTAA+AGG - Chr5:13985607-13985626 MsG0580025112.01.T01:CDS 20.0%
!! ATTTCATTCATAAGTATTTG+GGG - Chr5:13985371-13985390 MsG0580025112.01.T01:intron 20.0%
!! CATTTCATTCATAAGTATTT+GGG - Chr5:13985370-13985389 MsG0580025112.01.T01:intron 20.0%
!! GCTGTTATTAACATATAATT+AGG - Chr5:13985836-13985855 MsG0580025112.01.T01:CDS 20.0%
!! TATAAGTTTATAACTAGGAA+GGG - Chr5:13986073-13986092 MsG0580025112.01.T01:CDS 20.0%
!! TCATTTCATTCATAAGTATT+TGG - Chr5:13985369-13985388 MsG0580025112.01.T01:intron 20.0%
!! TCCAAAGTAATCAAATAAAT+TGG + Chr5:13984595-13984614 None:intergenic 20.0%
!! TTATAAGTTTATAACTAGGA+AGG - Chr5:13986072-13986091 MsG0580025112.01.T01:CDS 20.0%
!!! ATTAAGTTGTATATTTAGAC+AGG - Chr5:13984533-13984552 MsG0580025112.01.T01:CDS 20.0%
!!! ATTTGGTTAAGTTCTATTTT+TGG - Chr5:13986008-13986027 MsG0580025112.01.T01:CDS 20.0%
!!! TAAACATAGTTTTAAGGAAA+AGG - Chr5:13985506-13985525 MsG0580025112.01.T01:CDS 20.0%
!!! TCATAAACATGTTATTTCAT+TGG - Chr5:13984998-13985017 MsG0580025112.01.T01:intron 20.0%
!!! TTAAGTTGTATATTTAGACA+GGG - Chr5:13984534-13984553 MsG0580025112.01.T01:CDS 20.0%
!!! TTTTTCTTCTTCTTTCTATT+TGG - Chr5:13985991-13986010 MsG0580025112.01.T01:CDS 20.0%
!!! TTTTTTAAATAATAGGGGAA+AGG - Chr5:13986996-13987015 MsG0580025112.01.T01:CDS 20.0%
! AAAAGATTGTGAAACTGTTT+GGG - Chr5:13984358-13984377 MsG0580025112.01.T01:CDS 25.0%
! AAAATCTTAACTCATAGATC+AGG + Chr5:13985541-13985560 None:intergenic 25.0%
! AAACAAGCCTAAAAATTATC+AGG + Chr5:13984306-13984325 None:intergenic 25.0%
! AAATATAAAGGAACAAGAAG+TGG + Chr5:13985059-13985078 None:intergenic 25.0%
! AAATCTTAACTCATAGATCA+GGG + Chr5:13985540-13985559 None:intergenic 25.0%
! AAATGAACAAAGAAACATCA+TGG + Chr5:13985355-13985374 None:intergenic 25.0%
! AACAAGCCTAAAAATTATCA+GGG + Chr5:13984305-13984324 None:intergenic 25.0%
! ACTTCAGTTATTCTTATGAT+TGG - Chr5:13983832-13983851 MsG0580025112.01.T01:three_prime_UTR 25.0%
! ACTTCTTGTTCCTTTATATT+TGG - Chr5:13985058-13985077 MsG0580025112.01.T01:intron 25.0%
! AGATCAAATAGTCATGTATA+TGG + Chr5:13985479-13985498 None:intergenic 25.0%
! AGCATTAATAGAAACTTAGA+TGG + Chr5:13984810-13984829 None:intergenic 25.0%
! ATCATAAGAATAACTGAAGT+TGG + Chr5:13983832-13983851 None:intergenic 25.0%
! ATCTTAGTAGGAATATGTTA+TGG - Chr5:13986276-13986295 MsG0580025112.01.T01:intron 25.0%
! ATGTGTATATTCTTGTGTAT+GGG - Chr5:13984627-13984646 MsG0580025112.01.T01:CDS 25.0%
! ATTAAACGAAAACCAGTTAT+AGG - Chr5:13985197-13985216 MsG0580025112.01.T01:intron 25.0%
! ATTTCTGTCTATATGTATCT+TGG + Chr5:13986589-13986608 None:intergenic 25.0%
! CAAATAATATATGAGAATCG+AGG + Chr5:13987206-13987225 None:intergenic 25.0%
! CTTTACACTACTATAATCTT+TGG + Chr5:13984172-13984191 None:intergenic 25.0%
! GATCAAATAGTCATGTATAT+GGG + Chr5:13985478-13985497 None:intergenic 25.0%
! GCATTAATAGAAACTTAGAT+GGG + Chr5:13984809-13984828 None:intergenic 25.0%
! TAAAAGATTGTGAAACTGTT+TGG - Chr5:13984357-13984376 MsG0580025112.01.T01:CDS 25.0%
! TAACATATAATTAGGTCAGT+TGG - Chr5:13985844-13985863 MsG0580025112.01.T01:CDS 25.0%
! TTGAATACGACCAAATATAA+AGG + Chr5:13985071-13985090 None:intergenic 25.0%
!! AAAGCTTTTGGTATTTTATC+AGG - Chr5:13983787-13983806 MsG0580025112.01.T01:three_prime_UTR 25.0%
!! ATAATTTTGCAGCTGAAAAA+TGG - Chr5:13983623-13983642 MsG0580025112.01.T01:three_prime_UTR 25.0%
!! ATTTTATATGGCAGAAAATC+AGG - Chr5:13986153-13986172 MsG0580025112.01.T01:CDS 25.0%
!!! ATGAATACAACATTTTGAGA+AGG - Chr5:13984563-13984582 MsG0580025112.01.T01:CDS 25.0%
!!! TATATTGGTTCAATCTTAGT+AGG - Chr5:13986264-13986283 MsG0580025112.01.T01:intron 25.0%
!!! TGATAATTTTTAGGCTTGTT+TGG - Chr5:13984305-13984324 MsG0580025112.01.T01:CDS 25.0%
!!! TTCAATATCATAAAGGTATC+CGG + Chr5:13986427-13986446 None:intergenic 25.0%
!!! TTGGTTTTTTTAATAGTCCT+AGG - Chr5:13986027-13986046 MsG0580025112.01.T01:CDS 25.0%
AAAGAACCAAAAAACCAAAC+CGG - Chr5:13985895-13985914 MsG0580025112.01.T01:CDS 30.0%
AAAGGTTATGCCAAATAAGA+TGG - Chr5:13987014-13987033 MsG0580025112.01.T01:CDS 30.0%
AATATATAGTGATCCTGGTA+AGG + Chr5:13986250-13986269 None:intergenic 30.0%
AATGAACTGAAAACAGCTTA+TGG + Chr5:13984413-13984432 None:intergenic 30.0%
ACAAAAGGTTTCAGAAGTAA+AGG - Chr5:13985142-13985161 MsG0580025112.01.T01:intron 30.0%
ACTATGTGTGATGAATAACT+TGG - Chr5:13985304-13985323 MsG0580025112.01.T01:intron 30.0%
AGAGCATACTATCATTGAAA+TGG - Chr5:13985223-13985242 MsG0580025112.01.T01:intron 30.0%
AGATGTGTTAAAGTCTCTAA+TGG - Chr5:13983714-13983733 MsG0580025112.01.T01:three_prime_UTR 30.0%
ATGAATAACTTGGGACAAAT+GGG - Chr5:13985314-13985333 MsG0580025112.01.T01:intron 30.0%
CTATGTGTGATGAATAACTT+GGG - Chr5:13985305-13985324 MsG0580025112.01.T01:intron 30.0%
CTATTTGGTCTCAAATACTA+TGG - Chr5:13986336-13986355 MsG0580025112.01.T01:intron 30.0%
GAAAAGATGAATGAACCAAT+AGG + Chr5:13986393-13986412 None:intergenic 30.0%
GATGTGTATATTCTTGTGTA+TGG - Chr5:13984626-13984645 MsG0580025112.01.T01:CDS 30.0%
TAGTGGCTTCAATATCATAA+AGG + Chr5:13986434-13986453 None:intergenic 30.0%
TCATCTTGAAAATGAAGTTG+AGG - Chr5:13987103-13987122 MsG0580025112.01.T01:CDS 30.0%
TGAAATTCTTGGAGAGTTTA+TGG + Chr5:13984437-13984456 None:intergenic 30.0%
TTACCAGGATCACTATATAT+TGG - Chr5:13986249-13986268 MsG0580025112.01.T01:intron 30.0%
TTAGTTCGATTCAGAACTAT+AGG + Chr5:13985751-13985770 None:intergenic 30.0%
! AACGAACCCTGATAATTTTT+AGG - Chr5:13984296-13984315 MsG0580025112.01.T01:CDS 30.0%
! ATAAGTATTTGGGGTTTCTT+TGG - Chr5:13985380-13985399 MsG0580025112.01.T01:intron 30.0%
! ATTATGGGATTCATTGGTTA+TGG - Chr5:13983859-13983878 MsG0580025112.01.T01:three_prime_UTR 30.0%
! TACACAACATGATTTGTGAA+TGG + Chr5:13984009-13984028 None:intergenic 30.0%
! TGTTTTTCTTTGTCAACACT+AGG + Chr5:13985101-13985120 None:intergenic 30.0%
! TTGTTCTAAATGCAAGAAAC+AGG + Chr5:13986554-13986573 None:intergenic 30.0%
!! AAAGATGTTGGTAAAGCTTT+TGG - Chr5:13983775-13983794 MsG0580025112.01.T01:three_prime_UTR 30.0%
!! AACTACACATAGTTGACTTT+TGG + Chr5:13984244-13984263 None:intergenic 30.0%
!! ATTGGTTCATTCATCTTTTC+TGG - Chr5:13986393-13986412 MsG0580025112.01.T01:intron 30.0%
!! CTTATGATTGGTGCTATTAT+GGG - Chr5:13983844-13983863 MsG0580025112.01.T01:three_prime_UTR 30.0%
!! TAGTGTTGACAAAGAAAAAC+AGG - Chr5:13985100-13985119 MsG0580025112.01.T01:intron 30.0%
!! TCTTATGATTGGTGCTATTA+TGG - Chr5:13983843-13983862 MsG0580025112.01.T01:three_prime_UTR 30.0%
!!! ATTTCATTGGTTTTCACAGT+AGG - Chr5:13985011-13985030 MsG0580025112.01.T01:intron 30.0%
!!! GGTGAAAACTGTTGATTTTT+GGG - Chr5:13985244-13985263 MsG0580025112.01.T01:intron 30.0%
!!! TGGTGAAAACTGTTGATTTT+TGG - Chr5:13985243-13985262 MsG0580025112.01.T01:intron 30.0%
ACAAGATTGAAGTGATGGTT+GGG - Chr5:13986937-13986956 MsG0580025112.01.T01:CDS 35.0%
ACACATTGACAATACCTATG+CGG + Chr5:13986664-13986683 None:intergenic 35.0%
ACATATTGCTTGTACCCATA+TGG + Chr5:13983665-13983684 None:intergenic 35.0%
AGAAACTTTCCAAAAAACCG+TGG - Chr5:13984699-13984718 MsG0580025112.01.T01:intron 35.0%
AGATGAATGAACCAATAGGA+AGG + Chr5:13986389-13986408 None:intergenic 35.0%
AGGATACAAGATTGAAGTGA+TGG - Chr5:13986932-13986951 MsG0580025112.01.T01:CDS 35.0%
ATATGGGTACAAGCAATATG+TGG - Chr5:13983664-13983683 MsG0580025112.01.T01:three_prime_UTR 35.0%
ATGCAACTCTGCCTTTAAAT+GGG + Chr5:13984127-13984146 None:intergenic 35.0%
ATTGAACTGTCATGAACTCT+CGG - Chr5:13985962-13985981 MsG0580025112.01.T01:CDS 35.0%
CAAGAATCGATTAATCCGAA+GGG - Chr5:13984072-13984091 MsG0580025112.01.T01:three_prime_UTR 35.0%
CAATAGGAAGGTTAAGAATG+AGG + Chr5:13986377-13986396 None:intergenic 35.0%
CAGAACCTTTAACACAAGTT+AGG + Chr5:13985719-13985738 None:intergenic 35.0%
CATGCTTGTGTATGTGATTA+TGG - Chr5:13986497-13986516 MsG0580025112.01.T01:intron 35.0%
CTCATTCTTAACCTTCCTAT+TGG - Chr5:13986375-13986394 MsG0580025112.01.T01:intron 35.0%
GAACCAATATATAGTGATCC+TGG + Chr5:13986255-13986274 None:intergenic 35.0%
GACAGTAGCTATTTATCTCT+TGG - Chr5:13984956-13984975 MsG0580025112.01.T01:intron 35.0%
GAGTTCATGACAGTTCAATT+CGG + Chr5:13985961-13985980 None:intergenic 35.0%
GATGAATAACTTGGGACAAA+TGG - Chr5:13985313-13985332 MsG0580025112.01.T01:intron 35.0%
GTTATGTTTACCAGCCAATA+AGG + Chr5:13983925-13983944 None:intergenic 35.0%
GTTCTTTGGTTACATTGCAT+TGG - Chr5:13986218-13986237 MsG0580025112.01.T01:intron 35.0%
TACAAGATTGAAGTGATGGT+TGG - Chr5:13986936-13986955 MsG0580025112.01.T01:CDS 35.0%
TATGCAACTCTGCCTTTAAA+TGG + Chr5:13984128-13984147 None:intergenic 35.0%
TCTCAGATTCTGATGTTCTT+TGG - Chr5:13986204-13986223 MsG0580025112.01.T01:CDS 35.0%
TGAACAAACAGCAATGACTA+GGG + Chr5:13985452-13985471 None:intergenic 35.0%
TGTATATTCTTGTGTATGGG+TGG - Chr5:13984630-13984649 MsG0580025112.01.T01:CDS 35.0%
TGTATATTTAGACAGGGTGT+TGG - Chr5:13984540-13984559 MsG0580025112.01.T01:CDS 35.0%
TGTCAATGCAATGACAGTTT+AGG - Chr5:13985564-13985583 MsG0580025112.01.T01:CDS 35.0%
TTGAACAAACAGCAATGACT+AGG + Chr5:13985453-13985472 None:intergenic 35.0%
! CTGAACCTAACTTGTGTTAA+AGG - Chr5:13985711-13985730 MsG0580025112.01.T01:CDS 35.0%
! GTTCTGATTTCCAACCATTT+TGG + Chr5:13986872-13986891 None:intergenic 35.0%
! GTTTAACTCTCTAGTTCCTA+AGG - Chr5:13984271-13984290 MsG0580025112.01.T01:CDS 35.0%
!! ATTTCCAACCATTTTGGTAG+CGG + Chr5:13986866-13986885 None:intergenic 35.0%
!! TTGTTTGTGTCATTTCTCTG+TGG - Chr5:13985269-13985288 MsG0580025112.01.T01:intron 35.0%
!!! ATTTTAAAATGTGGTCGCCT+AGG + Chr5:13986047-13986066 None:intergenic 35.0%
!!! GAGTTGTTTTTGTGCTTGTT+TGG - Chr5:13986719-13986738 MsG0580025112.01.T01:intron 35.0%
!!! TTCTGGAATTTTTTCCGCAT+AGG - Chr5:13986647-13986666 MsG0580025112.01.T01:intron 35.0%
AAAAACCGTGGTCCAATTTC+CGG - Chr5:13984711-13984730 MsG0580025112.01.T01:intron 40.0%
AAACTGTTTGGGAGAGCTTA+CGG - Chr5:13984369-13984388 MsG0580025112.01.T01:CDS 40.0%
AAAGGAAGAGACATGTACCA+AGG - Chr5:13985160-13985179 MsG0580025112.01.T01:intron 40.0%
AAATAAGATGGAGAGAGAGC+TGG - Chr5:13987026-13987045 MsG0580025112.01.T01:CDS 40.0%
AAGGAAGAGGGGATATTCTT+TGG + Chr5:13983906-13983925 None:intergenic 40.0%
AATCTCAACTTCCTCTACCT+TGG + Chr5:13985180-13985199 None:intergenic 40.0%
ACAGGTTCATGAACCTTTGT+TGG - Chr5:13985118-13985137 MsG0580025112.01.T01:intron 40.0%
AGCTCTCTCTCCATCTTATT+TGG + Chr5:13987027-13987046 None:intergenic 40.0%
AGGATTTGTGACAGCCATAT+GGG - Chr5:13983648-13983667 MsG0580025112.01.T01:three_prime_UTR 40.0%
ATCAGAACTAAAACTACGCG+CGG - Chr5:13986884-13986903 MsG0580025112.01.T01:intron 40.0%
ATGGCTTTCGCTTGTGTATT+GGG - Chr5:13986516-13986535 MsG0580025112.01.T01:intron 40.0%
CAAGAAGTGGCATAGCTAAT+AGG + Chr5:13985046-13985065 None:intergenic 40.0%
CAAGATTGAAGTGATGGTTG+GGG - Chr5:13986938-13986957 MsG0580025112.01.T01:CDS 40.0%
CAAGTTCAACACTGAGATCA+TGG - Chr5:13986621-13986640 MsG0580025112.01.T01:intron 40.0%
CACTAGGACTGTTTATGGTT+CGG - Chr5:13985638-13985657 MsG0580025112.01.T01:CDS 40.0%
CACTCTCTGAATACTACATC+AGG - Chr5:13985420-13985439 MsG0580025112.01.T01:CDS 40.0%
CCAAGAATCGATTAATCCGA+AGG - Chr5:13984071-13984090 MsG0580025112.01.T01:three_prime_UTR 40.0%
CCAATTTCCGGCATTCTAAA+GGG - Chr5:13984723-13984742 MsG0580025112.01.T01:intron 40.0%
CTCTCTGTTGCTAAAGATGT+TGG - Chr5:13983763-13983782 MsG0580025112.01.T01:three_prime_UTR 40.0%
CTCTTGGCATTTGATATCTC+TGG - Chr5:13984972-13984991 MsG0580025112.01.T01:intron 40.0%
GAATATCCCCTCTTCCTTAT+TGG - Chr5:13983908-13983927 MsG0580025112.01.T01:three_prime_UTR 40.0%
GATGTTGGATGCATTCTTTC+TGG - Chr5:13987130-13987149 MsG0580025112.01.T01:CDS 40.0%
GCAATGAGACAAATGATAGC+AGG + Chr5:13984843-13984862 None:intergenic 40.0%
GCTCAAACTTGAGTTTGCAA+TGG - Chr5:13986756-13986775 MsG0580025112.01.T01:intron 40.0%
GTATGCTCTTCTCCTATAAC+TGG + Chr5:13985212-13985231 None:intergenic 40.0%
TAGAAACTTAGATGGGTCTG+AGG + Chr5:13984802-13984821 None:intergenic 40.0%
TAGGATTTGTGACAGCCATA+TGG - Chr5:13983647-13983666 MsG0580025112.01.T01:three_prime_UTR 40.0%
TATGGCTTTCGCTTGTGTAT+TGG - Chr5:13986515-13986534 MsG0580025112.01.T01:intron 40.0%
TCCAATTTCCGGCATTCTAA+AGG - Chr5:13984722-13984741 MsG0580025112.01.T01:intron 40.0%
TCTTCTGTAGAAGTTGAAGC+TGG + Chr5:13984891-13984910 None:intergenic 40.0%
TGAACCTTTGTTGGCACAAA+AGG - Chr5:13985127-13985146 MsG0580025112.01.T01:intron 40.0%
TGAAGTTGAGGCAAAGATGT+TGG - Chr5:13987115-13987134 MsG0580025112.01.T01:CDS 40.0%
TGCAACTCTGCCTTTAAATG+GGG + Chr5:13984126-13984145 None:intergenic 40.0%
TTACCAGCCAATAAGGAAGA+GGG + Chr5:13983918-13983937 None:intergenic 40.0%
TTCAATCTTGTATCCTGCCT+AGG + Chr5:13986928-13986947 None:intergenic 40.0%
TTCTTTGGACGCATTCTTTC+TGG - Chr5:13985395-13985414 MsG0580025112.01.T01:intron 40.0%
TTTACCAGCCAATAAGGAAG+AGG + Chr5:13983919-13983938 None:intergenic 40.0%
TTTGCAGCTGAAAAATGGCT+AGG - Chr5:13983628-13983647 MsG0580025112.01.T01:three_prime_UTR 40.0%
! CAACATGATTTGTGAATGGC+AGG + Chr5:13984005-13984024 None:intergenic 40.0%
! CCTTCGGATTAATCGATTCT+TGG + Chr5:13984074-13984093 None:intergenic 40.0%
! GAAACCTTTTGTGCCAACAA+AGG + Chr5:13985134-13985153 None:intergenic 40.0%
! TATCAGGGTTCGTTTTCCTT+AGG + Chr5:13984290-13984309 None:intergenic 40.0%
! TCATTGGTTATGGAGCTCAA+TGG - Chr5:13983869-13983888 MsG0580025112.01.T01:three_prime_UTR 40.0%
! TGGTTACATTGCATTGGCAA+TGG - Chr5:13986224-13986243 MsG0580025112.01.T01:intron 40.0%
!! ATCTTTTCTGGTCTCATTGC+CGG - Chr5:13986405-13986424 MsG0580025112.01.T01:intron 40.0%
!! GGTGCTATTATGGGATTCAT+TGG - Chr5:13983853-13983872 MsG0580025112.01.T01:three_prime_UTR 40.0%
!! GTTTATGGTTCGGTTCAAGA+AGG - Chr5:13985648-13985667 MsG0580025112.01.T01:CDS 40.0%
!! TACATAGCCCTTTAGAATGC+CGG + Chr5:13984733-13984752 None:intergenic 40.0%
!! TGCTTGTTTGGCTCTATTGT+GGG - Chr5:13986731-13986750 MsG0580025112.01.T01:intron 40.0%
!!! GAAATTGGACCACGGTTTTT+TGG + Chr5:13984711-13984730 None:intergenic 40.0%
!!! GTTCTTCCGGTTTGGTTTTT+TGG + Chr5:13985904-13985923 None:intergenic 40.0%
AAGCTGGTGGAGTTTCATGA+AGG + Chr5:13984875-13984894 None:intergenic 45.0%
AGAGACATGTACCAAGGTAG+AGG - Chr5:13985166-13985185 MsG0580025112.01.T01:intron 45.0%
AGGTACTAGGCACAAAGCAA+TGG - Chr5:13987067-13987086 MsG0580025112.01.T01:CDS 45.0%
ATTGAAGCCACTAGTGTACC+AGG - Chr5:13986441-13986460 MsG0580025112.01.T01:intron 45.0%
CACTGAGATCATGGTGTTTC+TGG - Chr5:13986630-13986649 MsG0580025112.01.T01:intron 45.0%
CGAACCATAAACAGTCCTAG+TGG + Chr5:13985640-13985659 None:intergenic 45.0%
GCAGCAGCTTCAGAACTATT+TGG - Chr5:13986321-13986340 MsG0580025112.01.T01:intron 45.0%
GTGAACTATCCGTCACAGTT+TGG + Chr5:13985926-13985945 None:intergenic 45.0%
TAACTTGGGACAAATGGGAC+AGG - Chr5:13985319-13985338 MsG0580025112.01.T01:intron 45.0%
TACCAGCCAATAAGGAAGAG+GGG + Chr5:13983917-13983936 None:intergenic 45.0%
TCTGTAGAAGTTGAAGCTGG+TGG + Chr5:13984888-13984907 None:intergenic 45.0%
TGGCTTTCGCTTGTGTATTG+GGG - Chr5:13986517-13986536 MsG0580025112.01.T01:intron 45.0%
TTGTGTATTGGGGTGTGGAT+TGG - Chr5:13986527-13986546 MsG0580025112.01.T01:intron 45.0%
! GGCATTCTAAAGGGCTATGT+AGG - Chr5:13984732-13984751 MsG0580025112.01.T01:intron 45.0%
! TTTCTCTGTGGTGTTGGAAC+AGG - Chr5:13985281-13985300 MsG0580025112.01.T01:intron 45.0%
!! AATAGTTCTGAAGCTGCTGC+TGG + Chr5:13986321-13986340 None:intergenic 45.0%
!! ACAGTTTGGTTCTTCCGGTT+TGG + Chr5:13985912-13985931 None:intergenic 45.0%
!! CAGGTCTTGTTTCTGATCGT+TGG - Chr5:13983806-13983825 MsG0580025112.01.T01:three_prime_UTR 45.0%
!! CCCTTTAGAATGCCGGAAAT+TGG + Chr5:13984726-13984745 None:intergenic 45.0%
!! GATCTTGCAACGAAGGTACT+AGG - Chr5:13987054-13987073 MsG0580025112.01.T01:CDS 45.0%
!! GTGCTTGTTTGGCTCTATTG+TGG - Chr5:13986730-13986749 MsG0580025112.01.T01:intron 45.0%
!! GTGTCATTTCTCTGTGGTGT+TGG - Chr5:13985275-13985294 MsG0580025112.01.T01:intron 45.0%
!!! TTTTTTTTTTTTTAAAAACT+CGG - Chr5:13984040-13984059 MsG0580025112.01.T01:three_prime_UTR 5.0%
ACTAAAACTACGCGCGGATG+CGG - Chr5:13986890-13986909 MsG0580025112.01.T01:intron 50.0%
ATCCCCTCTTCCTTATTGGC+TGG - Chr5:13983912-13983931 MsG0580025112.01.T01:three_prime_UTR 50.0%
CCGGAAGAACCAAACTGTGA+CGG - Chr5:13985914-13985933 MsG0580025112.01.T01:CDS 50.0%
CTTGTCGACCGCTACCAAAA+TGG - Chr5:13986855-13986874 MsG0580025112.01.T01:intron 50.0%
GAATGCCGGAAATTGGACCA+CGG + Chr5:13984719-13984738 None:intergenic 50.0%
GCAAAGTAGTCATCCTAGGC+AGG - Chr5:13986912-13986931 MsG0580025112.01.T01:intron 50.0%
GCAGAAAATCAGGCATGCCA+AGG - Chr5:13986163-13986182 MsG0580025112.01.T01:CDS 50.0%
GCGACCACTAGGACTGTTTA+TGG - Chr5:13985633-13985652 MsG0580025112.01.T01:CDS 50.0%
GCTGCGTTCCAAACTAACCT+TGG + Chr5:13986183-13986202 None:intergenic 50.0%
GGAGTGTGATCTTGCAACGA+AGG - Chr5:13987047-13987066 MsG0580025112.01.T01:CDS 50.0%
TCGACCGCTACCAAAATGGT+TGG - Chr5:13986859-13986878 MsG0580025112.01.T01:intron 50.0%
TGCGGCAAAGTAGTCATCCT+AGG - Chr5:13986908-13986927 MsG0580025112.01.T01:intron 50.0%
TGGGTGGAAACAGCACAACA+TGG - Chr5:13984646-13984665 MsG0580025112.01.T01:CDS 50.0%
TGTAAAGGATCGCGACCACT+AGG - Chr5:13985622-13985641 MsG0580025112.01.T01:CDS 50.0%
TTCGCTTGTGTATTGGGGTG+TGG - Chr5:13986522-13986541 MsG0580025112.01.T01:intron 50.0%
TTGTGAGGGGCCCCATTTAA+AGG - Chr5:13984113-13984132 MsG0580025112.01.T01:three_prime_UTR 50.0%
! CAGGCATGCCAAGGTTAGTT+TGG - Chr5:13986172-13986191 MsG0580025112.01.T01:CDS 50.0%
!! CCGTCACAGTTTGGTTCTTC+CGG + Chr5:13985917-13985936 None:intergenic 50.0%
AATCCCACCGTCCACTTGTG+AGG - Chr5:13984098-13984117 MsG0580025112.01.T01:three_prime_UTR 55.0%
ATCCCACCGTCCACTTGTGA+GGG - Chr5:13984099-13984118 MsG0580025112.01.T01:three_prime_UTR 55.0%
GAAGCCACTAGTGTACCAGG+AGG - Chr5:13986444-13986463 MsG0580025112.01.T01:intron 55.0%
GGACAAATGGGACAGGCACT+TGG - Chr5:13985326-13985345 MsG0580025112.01.T01:intron 55.0%
TAAATGGGGCCCCTCACAAG+TGG + Chr5:13984112-13984131 None:intergenic 55.0%
TCACAAGTGGACGGTGGGAT+TGG + Chr5:13984099-13984118 None:intergenic 55.0%
TCCTGTCACGACCCTCCAAT+AGG + Chr5:13986970-13986989 None:intergenic 55.0%
TGAAGTGATGGTTGGGGTGC+AGG - Chr5:13986944-13986963 MsG0580025112.01.T01:CDS 55.0%
! GCATTGGCAATGGCCTTACC+AGG - Chr5:13986234-13986253 MsG0580025112.01.T01:intron 55.0%
GCCACTAGTGTACCAGGAGG+CGG - Chr5:13986447-13986466 MsG0580025112.01.T01:intron 60.0%
GCCTATTGGAGGGTCGTGAC+AGG - Chr5:13986966-13986985 MsG0580025112.01.T01:CDS 60.0%
GGAGGCGGAAACACTTGCAC+TGG - Chr5:13986462-13986481 MsG0580025112.01.T01:intron 60.0%
GTGCAAGTGTTTCCGCCTCC+TGG + Chr5:13986462-13986481 None:intergenic 60.0%
TCCCACCGTCCACTTGTGAG+GGG - Chr5:13984100-13984119 MsG0580025112.01.T01:three_prime_UTR 60.0%
TCCGCCTCCTGGTACACTAG+TGG + Chr5:13986451-13986470 None:intergenic 60.0%
TGGGGTGCAGGCCTATTGGA+GGG - Chr5:13986956-13986975 MsG0580025112.01.T01:CDS 60.0%
TGGTTGGGGTGCAGGCCTAT+TGG - Chr5:13986952-13986971 MsG0580025112.01.T01:CDS 60.0%
TTGGGGTGCAGGCCTATTGG+AGG - Chr5:13986955-13986974 MsG0580025112.01.T01:CDS 60.0%
!! GACGGTGGGATTGGTCCCTT+CGG + Chr5:13984090-13984109 None:intergenic 60.0%
GCCCCTCACAAGTGGACGGT+GGG + Chr5:13984104-13984123 None:intergenic 65.0%
TGGGGCCCCTCACAAGTGGA+CGG + Chr5:13984108-13984127 None:intergenic 65.0%
GGCCCCTCACAAGTGGACGG+TGG + Chr5:13984105-13984124 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 13983604 13987246 13983604 ID=MsG0580025112.01;Name=MsG0580025112.01
Chr5 mRNA 13983604 13987246 13983604 ID=MsG0580025112.01.T01;Parent=MsG0580025112.01;Name=MsG0580025112.01.T01;_AED=0.29;_eAED=0.29;_QI=0|0.5|0.33|1|1|1|3|611|537
Chr5 exon 13983604 13984683 13983604 ID=MsG0580025112.01.T01:exon:20535;Parent=MsG0580025112.01.T01
Chr5 exon 13985409 13986223 13985409 ID=MsG0580025112.01.T01:exon:20534;Parent=MsG0580025112.01.T01
Chr5 exon 13986917 13987246 13986917 ID=MsG0580025112.01.T01:exon:20533;Parent=MsG0580025112.01.T01
Chr5 CDS 13986917 13987246 13986917 ID=MsG0580025112.01.T01:cds;Parent=MsG0580025112.01.T01
Chr5 CDS 13985409 13986223 13985409 ID=MsG0580025112.01.T01:cds;Parent=MsG0580025112.01.T01
Chr5 CDS 13984215 13984683 13984215 ID=MsG0580025112.01.T01:cds;Parent=MsG0580025112.01.T01
Chr5 three_prime_UTR 13983604 13984214 13983604 ID=MsG0580025112.01.T01:three_prime_utr;Parent=MsG0580025112.01.T01
Gene Sequence

>MsG0580025112.01.T01

ATGCTGTTATTCTCTAATAATAATTTTGCAGCTGAAAAATGGCTAGGATTTGTGACAGCCATATGGGTACAAGCAATATGTGGAAACAATTATACATTTGCAAACTATTCAGATGTGTTAAAGTCTCTAATGGCTTTGACTCAGATGCAGCTTAATGATCTCTCTGTTGCTAAAGATGTTGGTAAAGCTTTTGGTATTTTATCAGGTCTTGTTTCTGATCGTTGGCCAACTTCAGTTATTCTTATGATTGGTGCTATTATGGGATTCATTGGTTATGGAGCTCAATGGCTTGTTGTTAGCCAAAGAATATCCCCTCTTCCTTATTGGCTGATGTGTATATTCTTGTGTATGGGTGGAAACAGCACAACATGGATGAACACAGCAGTGCTTGTAACTTGCATGAGAAACTTTCCAAAAAACCGTGGTCCAATTTCCGGCATTCTAAAGGGCTATGTAGGACTCAGCACAGCAATCTTCACTGACATATGCACTGCTTTATTTTCCTCAGACCCATCTAAGTTTCTATTAATGCTCACAATTGTTCCTGCTATCATTTGTCTCATTGCTGCTATTTTCCTTCATGAAACTCCACCAGCTTCAACTTCTACAGAAGAAAATAAAGAGACACAGTTCTTCAATGTGTTTAACTTGATTGCAGTGACAGTAGCTATTTATCTCTTGGCATTTGATATCTCTGGACCTCATAAACATGTTATTTCATTGGTTTTCACAGTAGGACTTTTGATCCTATTAGCTATGCCACTTCTTGTTCCTTTATATTTGGTCGTATTCAAAACTAGTCCTAGTGTTGACAAAGAAAAACAGGTTCATGAACCTTTGTTGGCACAAAAGGTTTCAGAAGTAAAGGAAGAGACATGTACCAAGGTAGAGGAAGTTGAGATTAAACGAAAACCAGTTATAGGAGAAGAGCATACTATCATTGAAATGGTGAAAACTGTTGATTTTTGGGTTTTGTTTGTGTCATTTCTCTGTGGTGTTGGAACAGGACTATGTGTGATGAATAACTTGGGACAAATGGGACAGGCACTTGGTTACCATGATGTTTCTTTGTTCATTTCATTCATAAGTATTTGGGGTTTCTTTGGACGCATTCTTTCTGGATCACTCTCTGAATACTACATCAGAAAATCAGGCATGCCAAGGTTAGTTTGGAACGCAGCATCTCAGATTCTGATGTTCTTTGGTTACATTGCATTGGCAATGGCCTTACCAGGATCACTATATATTGGTTCAATCTTAGTAGGAATATGTTATGGAGTTCGTCTTACAATAACACCAGCAGCAGCTTCAGAACTATTTGGTCTCAAATACTATGGTTTATTATACAACATCCTCATTCTTAACCTTCCTATTGGTTCATTCATCTTTTCTGGTCTCATTGCCGGATACCTTTATGATATTGAAGCCACTAGTGTACCAGGAGGCGGAAACACTTGCACTGGAGCACATTGTTTCATGCTTGTGTATGTGATTATGGCTTTCGCTTGTGTATTGGGGTGTGGATTGGACCTGTTTCTTGCATTTAGAACAAAGAATGTATATTCCAAGATACATATAGACAGAAATCTTGTCAATTCTCAAGTTCAACACTGA
Protein sequence

>MsG0580025112.01.T01

MLLFSNNNFAAEKWLGFVTAIWVQAICGNNYTFANYSDVLKSLMALTQMQLNDLSVAKDVGKAFGILSGLVSDRWPTSVILMIGAIMGFIGYGAQWLVVSQRISPLPYWLMCIFLCMGGNSTTWMNTAVLVTCMRNFPKNRGPISGILKGYVGLSTAIFTDICTALFSSDPSKFLLMLTIVPAIICLIAAIFLHETPPASTSTEENKETQFFNVFNLIAVTVAIYLLAFDISGPHKHVISLVFTVGLLILLAMPLLVPLYLVVFKTSPSVDKEKQVHEPLLAQKVSEVKEETCTKVEEVEIKRKPVIGEEHTIIEMVKTVDFWVLFVSFLCGVGTGLCVMNNLGQMGQALGYHDVSLFISFISIWGFFGRILSGSLSEYYIRKSGMPRLVWNAASQILMFFGYIALAMALPGSLYIGSILVGICYGVRLTITPAAASELFGLKYYGLLYNILILNLPIGSFIFSGLIAGYLYDIEATSVPGGGNTCTGAHCFMLVYVIMAFACVLGCGLDLFLAFRTKNVYSKIHIDRNLVNSQVQH*