AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047075.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047075.01.T01 MTR_4g120410 82.039 412 16 4 2 413 1 354 0.0 667
MsG0880047075.01.T01 MTR_2g435550 61.893 412 98 4 2 412 1 354 0.0 513
MsG0880047075.01.T01 MTR_2g435550 63.010 392 86 3 2 392 1 334 1.26e-176 498
MsG0880047075.01.T01 MTR_2g435550 61.809 398 93 4 16 412 1 340 7.90e-176 495
MsG0880047075.01.T01 MTR_7g112490 50.351 427 158 7 2 424 1 377 2.55e-143 414
MsG0880047075.01.T01 MTR_7g112490 50.234 428 159 7 1 424 18 395 3.40e-143 414
MsG0880047075.01.T01 MTR_1g083690 48.418 411 152 7 2 412 1 351 9.72e-128 373
MsG0880047075.01.T01 MTR_7g080170 40.860 372 185 6 42 411 46 384 1.61e-91 285
MsG0880047075.01.T01 MTR_7g021530 40.369 379 148 7 56 415 52 371 5.06e-87 271
MsG0880047075.01.T01 MTR_7g021530 40.369 379 148 7 56 415 93 412 1.72e-86 271
MsG0880047075.01.T01 MTR_4g037470 38.950 362 147 7 64 411 69 370 2.18e-85 269
MsG0880047075.01.T01 MTR_4g037470 38.005 371 147 8 64 411 69 379 2.07e-82 261
MsG0880047075.01.T01 MTR_4g013295 40.625 352 153 11 62 412 48 344 8.69e-82 256
MsG0880047075.01.T01 MTR_2g090190 40.115 349 160 5 64 411 63 363 1.04e-80 256
MsG0880047075.01.T01 MTR_7g070510 39.773 352 163 8 61 411 61 364 1.31e-80 256
MsG0880047075.01.T01 MTR_7g021530 37.791 344 162 5 78 415 24 321 4.39e-73 233
MsG0880047075.01.T01 MTR_7g021530 39.755 327 120 6 56 363 52 320 9.59e-71 226
MsG0880047075.01.T01 MTR_7g021530 39.755 327 120 6 56 363 93 361 2.50e-70 226
MsG0880047075.01.T01 MTR_7g080170 39.159 309 153 6 105 411 1 276 1.09e-65 215
MsG0880047075.01.T01 MTR_8g017240 54.023 174 78 2 239 412 169 340 2.70e-59 198
MsG0880047075.01.T01 MTR_8g017240 36.806 144 85 2 51 194 45 182 5.31e-24 103
MsG0880047075.01.T01 MTR_1g016620 46.073 191 97 2 227 412 140 329 1.04e-46 164
MsG0880047075.01.T01 MTR_1g016620 27.711 166 117 2 29 194 8 170 8.60e-16 78.6
MsG0880047075.01.T01 MTR_7g021530 32.794 247 89 6 56 283 52 240 1.71e-29 115
MsG0880047075.01.T01 MTR_7g021530 32.794 247 89 6 56 283 93 281 3.34e-29 116
MsG0880047075.01.T01 MTR_1g014640 35.669 157 83 5 235 390 170 309 7.21e-22 96.3
MsG0880047075.01.T01 MTR_1g013400 35.669 157 83 5 235 390 170 309 7.21e-22 96.3
MsG0880047075.01.T01 MTR_3g105730 34.395 157 85 4 235 390 105 244 9.58e-22 94.7
MsG0880047075.01.T01 MTR_3g105730 35.032 157 84 5 235 390 127 266 1.32e-21 94.7
MsG0880047075.01.T01 MTR_1g115570 37.419 155 78 6 235 388 185 321 1.16e-20 93.2
MsG0880047075.01.T01 MTR_5g009370 39.394 132 64 4 240 371 163 278 1.19e-19 89.7
MsG0880047075.01.T01 MTR_6g081850 34.946 186 87 6 244 414 155 321 4.78e-19 87.8
MsG0880047075.01.T01 MTR_6g087000 28.218 202 118 5 231 407 178 377 1.88e-18 88.6
MsG0880047075.01.T01 MTR_6g087000 28.218 202 118 5 231 407 178 377 2.62e-18 88.2
MsG0880047075.01.T01 MTR_5g080680 39.394 132 62 5 241 371 214 328 1.08e-17 84.7
MsG0880047075.01.T01 MTR_2g008850 35.632 174 87 8 239 411 85 234 1.27e-17 82.0
MsG0880047075.01.T01 MTR_4g118340 27.746 173 106 2 239 393 153 324 2.46e-17 84.0
MsG0880047075.01.T01 MTR_2g008850 35.632 174 87 8 239 411 131 280 3.55e-17 81.6
MsG0880047075.01.T01 MTR_2g078760 36.257 171 86 8 239 409 104 251 4.02e-17 81.3
MsG0880047075.01.T01 MTR_5g063940 37.143 175 83 9 239 411 85 234 4.40e-17 80.5
MsG0880047075.01.T01 MTR_4g094208 35.057 174 88 8 239 411 127 276 5.37e-17 81.3
MsG0880047075.01.T01 MTR_8g463130 36.571 175 86 10 239 412 104 254 7.35e-17 80.5
MsG0880047075.01.T01 MTR_8g463130 36.571 175 86 10 239 412 132 282 9.23e-17 80.5
MsG0880047075.01.T01 MTR_5g063940 37.143 175 83 9 239 411 132 281 1.02e-16 80.5
MsG0880047075.01.T01 MTR_2g078760 36.257 171 86 8 239 409 183 330 1.16e-16 81.3
MsG0880047075.01.T01 MTR_3g068200 40.458 131 62 5 241 371 207 321 2.85e-16 80.5
MsG0880047075.01.T01 MTR_1g028300 40.496 121 56 3 251 371 226 330 5.30e-16 79.7
MsG0880047075.01.T01 MTR_3g074610 35.632 174 87 8 239 411 132 281 5.58e-16 78.2
MsG0880047075.01.T01 MTR_3g091060 29.444 180 102 5 235 413 187 342 3.47e-15 77.0
MsG0880047075.01.T01 MTR_2g020970 29.714 175 98 4 239 392 154 324 4.52e-15 76.6
MsG0880047075.01.T01 MTR_2g020970 29.064 203 114 6 239 417 154 350 5.08e-15 77.0
MsG0880047075.01.T01 MTR_4g094542 34.286 175 88 9 239 411 215 364 6.78e-15 76.3
MsG0880047075.01.T01 MTR_2g040500 29.137 278 128 11 92 367 267 477 9.61e-15 76.6
MsG0880047075.01.T01 MTR_4g125810 38.462 130 64 4 241 370 332 445 1.31e-14 75.9
MsG0880047075.01.T01 MTR_3g464700 35.659 129 68 4 242 370 185 298 2.33e-14 74.3
MsG0880047075.01.T01 MTR_3g104710 26.316 304 131 11 72 370 269 484 3.69e-14 74.7
MsG0880047075.01.T01 MTR_8g102550 35.000 140 75 4 231 370 217 340 7.36e-14 73.2
MsG0880047075.01.T01 MTR_7g081020 31.609 174 86 7 247 396 157 321 1.25e-12 69.3
MsG0880047075.01.T01 MTR_1g086350 30.573 157 80 5 244 390 96 233 1.88e-12 67.8
MsG0880047075.01.T01 MTR_2g033910 26.818 220 108 8 245 420 155 365 2.34e-12 68.6
MsG0880047075.01.T01 MTR_4g123080 32.515 163 80 7 238 390 170 312 3.62e-12 67.8
MsG0880047075.01.T01 MTR_8g074930 30.000 180 93 7 241 396 42 212 4.11e-12 67.0
MsG0880047075.01.T01 MTR_3g107880 29.570 186 102 8 244 423 135 297 4.81e-12 67.0
MsG0880047075.01.T01 MTR_1g086350 30.573 157 80 5 244 390 182 319 4.89e-12 67.4
MsG0880047075.01.T01 MTR_4g123080 32.515 163 80 7 238 390 188 330 5.33e-12 67.4
MsG0880047075.01.T01 MTR_1g086350 30.573 157 80 5 244 390 198 335 5.35e-12 67.4
MsG0880047075.01.T01 MTR_8g074930 30.000 180 93 7 241 396 154 324 5.80e-12 67.4
MsG0880047075.01.T01 MTR_2g078760 38.211 123 60 6 239 361 183 289 6.33e-12 66.2
MsG0880047075.01.T01 MTR_5g024340 32.278 158 80 6 223 371 169 308 7.65e-12 67.0
MsG0880047075.01.T01 MTR_3g107880 29.570 186 102 8 244 423 193 355 7.72e-12 67.0
MsG0880047075.01.T01 MTR_3g107880 29.570 186 102 8 244 423 192 354 8.33e-12 67.0
MsG0880047075.01.T01 MTR_4g007440 31.655 139 69 4 241 371 167 287 8.52e-12 66.6
MsG0880047075.01.T01 MTR_2g033000 29.448 163 85 6 238 390 175 317 9.09e-12 66.6
MsG0880047075.01.T01 MTR_5g071550 28.652 178 99 7 242 413 221 376 1.89e-11 65.9
MsG0880047075.01.T01 MTR_1g050520 29.771 131 78 4 241 371 494 610 2.10e-11 66.2
MsG0880047075.01.T01 MTR_1g110210 31.414 191 106 9 246 427 144 318 2.38e-11 65.1
MsG0880047075.01.T01 MTR_4g119830 34.177 158 68 7 240 371 283 430 3.87e-11 65.1
MsG0880047075.01.T01 MTR_0015s0140 27.551 196 112 7 247 413 106 300 6.13e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047075.01.T01 AT5G27930 50.122 411 145 4 2 410 1 353 2.12e-146 421
MsG0880047075.01.T01 AT5G27930 50.122 411 145 4 2 410 1 353 2.12e-146 421
MsG0880047075.01.T01 AT3G05640 48.184 413 149 4 2 412 1 350 5.39e-140 404
MsG0880047075.01.T01 AT3G05640 48.184 413 149 4 2 412 1 350 5.39e-140 404
MsG0880047075.01.T01 AT3G05640 48.184 413 149 4 2 412 1 350 5.39e-140 404
MsG0880047075.01.T01 AT3G16800 47.115 416 152 5 2 414 1 351 1.78e-134 390
MsG0880047075.01.T01 AT3G16800 47.115 416 152 5 2 414 1 351 1.78e-134 390
MsG0880047075.01.T01 AT3G16800 47.115 416 152 5 2 414 1 351 1.78e-134 390
MsG0880047075.01.T01 AT5G27930 49.304 359 122 5 2 358 1 301 9.26e-118 347
MsG0880047075.01.T01 AT3G16800 47.352 321 103 4 95 414 1 256 2.87e-97 292
MsG0880047075.01.T01 AT3G16800 47.352 321 103 4 95 414 1 256 2.87e-97 292
MsG0880047075.01.T01 AT5G36250 39.418 378 174 6 45 411 51 384 1.07e-93 290
MsG0880047075.01.T01 AT5G36250 38.265 392 173 7 45 411 51 398 6.10e-90 280
MsG0880047075.01.T01 AT1G79630 40.584 377 186 8 51 417 57 405 2.89e-89 280
MsG0880047075.01.T01 AT1G79630 40.584 377 186 8 51 417 53 401 4.52e-89 279
MsG0880047075.01.T01 AT3G02750 38.308 402 224 5 16 417 22 399 2.09e-87 275
MsG0880047075.01.T01 AT3G02750 38.308 402 224 5 16 417 22 399 2.09e-87 275
MsG0880047075.01.T01 AT1G16220 38.108 370 181 6 51 415 54 380 1.91e-85 270
MsG0880047075.01.T01 AT1G79630 41.329 346 165 8 82 417 18 335 3.82e-81 256
MsG0880047075.01.T01 AT1G79630 41.329 346 165 8 82 417 18 335 3.82e-81 256
MsG0880047075.01.T01 AT1G03590 38.462 377 162 7 46 411 45 362 6.80e-81 257
MsG0880047075.01.T01 AT3G02750 35.240 437 224 6 16 417 22 434 4.09e-80 257
MsG0880047075.01.T01 AT4G03415 40.230 348 163 6 64 411 70 372 7.98e-80 254
MsG0880047075.01.T01 AT4G03415 40.230 348 163 6 64 411 70 372 7.98e-80 254
MsG0880047075.01.T01 AT4G03415 40.230 348 163 6 64 411 70 372 7.98e-80 254
MsG0880047075.01.T01 AT5G36250 38.415 328 147 6 45 361 51 334 9.03e-76 240
MsG0880047075.01.T01 AT5G01700 36.712 365 165 4 52 413 38 339 1.33e-74 238
MsG0880047075.01.T01 AT5G01700 36.994 346 158 6 68 413 5 290 3.77e-73 233
MsG0880047075.01.T01 AT1G79630 56.425 179 78 0 239 417 117 295 1.14e-70 228
MsG0880047075.01.T01 AT1G79630 56.425 179 78 0 239 417 117 295 1.14e-70 228
MsG0880047075.01.T01 AT1G79630 56.425 179 78 0 239 417 117 295 1.14e-70 228
MsG0880047075.01.T01 AT1G79630 56.425 179 78 0 239 417 117 295 1.14e-70 228
MsG0880047075.01.T01 AT5G26010 35.227 352 157 7 63 413 45 326 5.67e-64 209
MsG0880047075.01.T01 AT3G16800 38.596 285 107 6 2 283 1 220 1.65e-57 189
MsG0880047075.01.T01 AT4G32950 43.575 179 101 0 241 419 146 324 3.12e-51 176
MsG0880047075.01.T01 AT4G32950 33.065 124 69 3 30 144 15 133 1.13e-11 66.2
MsG0880047075.01.T01 AT4G32950 50.847 118 58 0 241 358 146 263 1.79e-37 138
MsG0880047075.01.T01 AT4G32950 33.065 124 69 3 30 144 15 133 5.28e-12 66.6
MsG0880047075.01.T01 AT4G31750 32.584 178 95 7 235 411 126 279 1.40e-21 95.1
MsG0880047075.01.T01 AT4G31750 32.584 178 95 7 235 411 126 279 1.90e-21 94.7
MsG0880047075.01.T01 AT4G31750 32.584 178 95 7 235 411 126 279 1.90e-21 94.7
MsG0880047075.01.T01 AT1G07430 43.182 132 57 5 241 371 240 354 5.18e-20 92.0
MsG0880047075.01.T01 AT5G24940 36.538 156 83 5 235 390 126 265 5.75e-20 92.0
MsG0880047075.01.T01 AT2G20050 28.571 203 119 4 230 409 196 395 8.47e-20 92.8
MsG0880047075.01.T01 AT2G20050 28.571 203 119 4 230 409 196 395 9.04e-20 92.8
MsG0880047075.01.T01 AT5G10740 34.395 157 85 5 235 390 126 265 1.15e-19 90.1
MsG0880047075.01.T01 AT5G10740 34.395 157 85 5 235 390 126 265 1.15e-19 90.1
MsG0880047075.01.T01 AT4G28400 35.632 174 87 9 240 412 112 261 6.53e-19 86.7
MsG0880047075.01.T01 AT5G59220 43.511 131 58 4 241 371 228 342 1.05e-18 88.2
MsG0880047075.01.T01 AT3G11410 28.070 285 127 12 88 370 133 341 1.22e-18 87.8
MsG0880047075.01.T01 AT4G28400 35.632 174 87 9 240 412 134 283 1.24e-18 86.3
MsG0880047075.01.T01 AT5G53140 29.630 189 110 5 235 423 194 359 3.13e-18 86.7
MsG0880047075.01.T01 AT5G53140 29.630 189 110 5 235 423 194 359 3.13e-18 86.7
MsG0880047075.01.T01 AT1G43900 36.986 146 73 6 242 386 223 350 4.30e-18 85.9
MsG0880047075.01.T01 AT1G18030 33.516 182 87 6 245 411 186 348 6.85e-17 82.0
MsG0880047075.01.T01 AT1G22280 35.632 174 87 9 239 411 137 286 8.24e-17 80.9
MsG0880047075.01.T01 AT1G22280 35.632 174 87 9 239 411 131 280 9.18e-17 80.5
MsG0880047075.01.T01 AT2G20630 33.333 174 91 7 240 412 130 279 2.08e-16 79.7
MsG0880047075.01.T01 AT2G20630 33.526 173 90 7 240 411 130 278 1.03e-15 77.8
MsG0880047075.01.T01 AT1G07160 38.095 126 63 4 246 371 226 336 2.17e-15 77.8
MsG0880047075.01.T01 AT1G34750 34.682 173 86 9 239 409 132 279 1.49e-14 74.3
MsG0880047075.01.T01 AT1G34750 34.682 173 86 9 239 409 132 279 1.49e-14 74.3
MsG0880047075.01.T01 AT1G34750 34.682 173 86 9 239 409 132 279 1.49e-14 74.3
MsG0880047075.01.T01 AT3G06270 27.815 151 90 2 239 371 155 304 6.94e-14 73.2
MsG0880047075.01.T01 AT1G78200 33.333 174 93 8 239 411 86 237 8.98e-14 71.2
MsG0880047075.01.T01 AT1G78200 33.333 174 93 8 239 411 86 237 8.98e-14 71.2
MsG0880047075.01.T01 AT2G40180 36.842 133 68 6 239 371 230 346 1.05e-13 72.8
MsG0880047075.01.T01 AT3G15260 34.857 175 89 10 239 412 139 289 1.17e-13 71.6
MsG0880047075.01.T01 AT3G15260 34.857 175 89 10 239 412 139 289 1.17e-13 71.6
MsG0880047075.01.T01 AT1G78200 33.333 174 93 8 239 411 131 282 1.20e-13 71.6
MsG0880047075.01.T01 AT1G78200 33.333 174 93 8 239 411 131 282 1.20e-13 71.6
MsG0880047075.01.T01 AT1G78200 33.333 174 93 8 239 411 131 282 1.20e-13 71.6
MsG0880047075.01.T01 AT1G18030 35.938 128 58 4 245 361 186 300 2.87e-13 70.5
MsG0880047075.01.T01 AT5G51760 32.450 151 84 5 222 371 189 322 5.62e-13 70.5
MsG0880047075.01.T01 AT5G51760 32.450 151 84 5 222 371 219 352 7.05e-13 70.5
MsG0880047075.01.T01 AT1G67820 35.115 131 70 4 241 371 182 297 8.37e-13 70.1
MsG0880047075.01.T01 AT3G55050 27.805 205 99 8 247 412 165 359 9.49e-13 69.7
MsG0880047075.01.T01 AT3G55050 27.805 205 99 8 247 412 165 359 9.49e-13 69.7
MsG0880047075.01.T01 AT3G51370 27.928 222 109 9 241 420 69 281 1.42e-12 68.6
MsG0880047075.01.T01 AT1G67820 35.115 131 70 4 241 371 218 333 1.44e-12 69.7
MsG0880047075.01.T01 AT3G51370 27.928 222 109 9 241 420 154 366 2.33e-12 68.6
MsG0880047075.01.T01 AT3G51370 27.928 222 109 9 241 420 154 366 2.33e-12 68.6
MsG0880047075.01.T01 AT4G28400 37.398 123 59 7 240 361 134 239 2.88e-12 67.0
MsG0880047075.01.T01 AT2G25620 33.813 139 62 5 241 368 197 316 3.87e-12 68.2
MsG0880047075.01.T01 AT2G25620 33.813 139 62 5 241 368 197 316 3.87e-12 68.2
MsG0880047075.01.T01 AT2G33700 30.939 181 96 7 244 419 193 349 3.88e-12 67.8
MsG0880047075.01.T01 AT2G30020 33.333 126 69 4 246 371 243 353 4.76e-12 67.8
MsG0880047075.01.T01 AT1G72770 33.600 125 67 3 246 370 338 446 8.91e-12 67.4
MsG0880047075.01.T01 AT1G72770 33.600 125 67 3 246 370 338 446 8.91e-12 67.4
MsG0880047075.01.T01 AT1G72770 33.600 125 67 3 246 370 338 446 8.91e-12 67.4
MsG0880047075.01.T01 AT4G26080 36.508 126 64 4 246 371 253 362 9.78e-12 67.0
MsG0880047075.01.T01 AT3G12620 27.397 219 107 10 247 422 164 373 1.00e-11 66.6
MsG0880047075.01.T01 AT3G12620 27.397 219 107 10 247 422 164 373 1.00e-11 66.6
MsG0880047075.01.T01 AT1G17550 33.607 122 65 3 246 367 338 443 1.81e-11 66.2
MsG0880047075.01.T01 AT1G17550 33.607 122 65 3 246 367 338 443 1.81e-11 66.2
MsG0880047075.01.T01 AT1G09160 29.609 179 106 8 222 390 114 282 2.02e-11 65.9
MsG0880047075.01.T01 AT1G09160 29.609 179 106 8 222 390 114 282 2.02e-11 65.9
MsG0880047075.01.T01 AT3G51470 28.061 196 109 8 233 419 117 289 2.12e-11 65.1
MsG0880047075.01.T01 AT1G68410 30.846 201 113 10 229 419 132 316 2.44e-11 65.9
MsG0880047075.01.T01 AT1G68410 30.846 201 113 10 229 419 132 316 2.44e-11 65.9
MsG0880047075.01.T01 AT1G68410 30.846 201 113 10 229 419 132 316 2.44e-11 65.9
MsG0880047075.01.T01 AT1G68410 30.846 201 113 10 229 419 132 316 2.44e-11 65.9
MsG0880047075.01.T01 AT3G51470 28.061 196 109 8 233 419 161 333 4.23e-11 64.7
MsG0880047075.01.T01 AT3G62260 28.902 173 98 5 244 411 107 259 4.30e-11 63.9
MsG0880047075.01.T01 AT1G48040 28.571 182 101 5 244 418 197 356 5.01e-11 64.3
MsG0880047075.01.T01 AT1G47380 31.613 155 90 7 240 389 134 277 8.55e-11 63.9
MsG0880047075.01.T01 AT3G17250 28.962 183 98 6 244 418 239 397 9.44e-11 63.9

Find 83 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAATCTCACTTGGTAAATT+TGG 0.131713 8:-81611352 None:intergenic
CACCCACATTTGCTATAATA+AGG 0.225369 8:-81611255 None:intergenic
TGTTGCTGATGGTAGGAATT+TGG 0.249175 8:+81610003 MsG0880047075.01.T01:intron
TATTAATTTCCTAACTCTTT+TGG 0.258816 8:-81610091 None:intergenic
CAGCTTCCATCTTTATATCT+AGG 0.307835 8:-81610167 None:intergenic
TATTTGATGGGCATGGTCCT+TGG 0.310073 8:+81610055 MsG0880047075.01.T01:CDS
ATTTGATGGGCATGGTCCTT+GGG 0.311102 8:+81610056 MsG0880047075.01.T01:CDS
ACCAAGACCGTCTTATTGTT+TGG 0.315222 8:+81609898 MsG0880047075.01.T01:CDS
TTTACACATAGAGGCCAAAA+AGG 0.315756 8:+81609870 MsG0880047075.01.T01:CDS
GTAAGAATAGCTTGGTGCTT+AGG 0.320463 8:+81610478 MsG0880047075.01.T01:CDS
AACAAAACTATTATCCTTGT+TGG 0.331624 8:-81609841 None:intergenic
CCAAGACCGTCTTATTGTTT+GGG 0.349031 8:+81609899 MsG0880047075.01.T01:CDS
CGGTGTGCTGCTTCAAATCT+TGG 0.381454 8:-81610254 None:intergenic
GCCAATCCGTTGACAAAAGA+TGG 0.386375 8:-81609693 None:intergenic
TTGAACATTGACCATGTTGT+AGG 0.387054 8:-81610399 None:intergenic
AAGATGAACCAGGGGTGTAT+AGG 0.388632 8:+81611519 MsG0880047075.01.T01:CDS
AGATGAACCAGGGGTGTATA+GGG 0.393336 8:+81611520 MsG0880047075.01.T01:CDS
AAGAAAAGCTGTGGAAGAAT+TGG 0.395641 8:+81609764 MsG0880047075.01.T01:CDS
CACAAAACATCATGTCTTGT+TGG 0.396420 8:-81610029 None:intergenic
GAGTTCCTCTGGAGTTGTTA+AGG 0.398488 8:+81609818 MsG0880047075.01.T01:CDS
AATCAGCAAGTTTAGTGGTT+AGG 0.402299 8:-81611989 None:intergenic
CAATTAATCAGCAAGTTTAG+TGG 0.415315 8:-81611994 None:intergenic
ATATTCATGGTTTAGACCTA+TGG 0.431925 8:+81610196 MsG0880047075.01.T01:CDS
TTAGCAATATCTAGAGCCTT+TGG 0.434339 8:+81611572 MsG0880047075.01.T01:CDS
TAAGAATAGCTTGGTGCTTA+GGG 0.434551 8:+81610479 MsG0880047075.01.T01:CDS
GACTATTGTATGAAGGACTA+TGG 0.438650 8:+81611596 MsG0880047075.01.T01:CDS
GAATTGTTATTGAGTTCCTC+TGG 0.442142 8:+81609807 MsG0880047075.01.T01:CDS
AGTTTAGTGGTTAGGAGTGG+AGG 0.478922 8:-81611981 None:intergenic
AGCTTTGACAATCATCAAAC+AGG 0.480738 8:+81610305 MsG0880047075.01.T01:CDS
GGTTAGGAGTGGAGGAGAGG+TGG 0.481218 8:-81611973 None:intergenic
TTTATCATCTTAGCAACAGA+TGG 0.483669 8:+81611671 MsG0880047075.01.T01:CDS
AATCTTCACTGCCTCTTCGT+TGG 0.490188 8:-81611817 None:intergenic
GCTCTAGATATTGCTAATCC+TGG 0.491697 8:-81611566 None:intergenic
TTATGTAGGATTGCTTCCAT+AGG 0.494692 8:-81610212 None:intergenic
AGTGGTTAGGAGTGGAGGAG+AGG 0.505807 8:-81611976 None:intergenic
CTTTGGTGACTATTGTATGA+AGG 0.508050 8:+81611589 MsG0880047075.01.T01:CDS
AAACCTTATTATAGCAAATG+TGG 0.508516 8:+81611252 MsG0880047075.01.T01:CDS
AGCTGTAGTGCCACTTTGAA+AGG 0.509046 8:-81610286 None:intergenic
TACTCTCCGGACAGTGAAGT+TGG 0.511414 8:-81610439 None:intergenic
TGTCCGGAGAGTAGAGTTGT+TGG 0.511624 8:+81610449 MsG0880047075.01.T01:CDS
TGTGGAGTATTTGATGGGCA+TGG 0.516964 8:+81610048 MsG0880047075.01.T01:CDS
TGAAGTATGCCATGCGTGAA+TGG 0.517515 8:+81611883 MsG0880047075.01.T01:CDS
AAGTCAGTGGTAAGCTGAAG+TGG 0.531089 8:-81611325 None:intergenic
AAGATTTGAAGCAGCACACC+GGG 0.534039 8:+81610256 MsG0880047075.01.T01:CDS
GCATTGCCAACTTCACTGTC+CGG 0.536397 8:+81610433 MsG0880047075.01.T01:CDS
TATTTGAATCTTGAAAATGT+TGG 0.541723 8:+81610375 MsG0880047075.01.T01:CDS
TAAATTTGGTTTGAAGTCAG+TGG 0.545421 8:-81611338 None:intergenic
GAACGCATAAAAGAATCAAA+AGG 0.546475 8:+81611479 MsG0880047075.01.T01:CDS
CCCAAACAATAAGACGGTCT+TGG 0.563298 8:-81609899 None:intergenic
TTATCATCTTAGCAACAGAT+GGG 0.564249 8:+81611672 MsG0880047075.01.T01:CDS
CCAATCCGTTGACAAAAGAT+GGG 0.565463 8:-81609692 None:intergenic
ATCCACACCCTATACACCCC+TGG 0.569148 8:-81611527 None:intergenic
AATTGACCTAGATATAAAGA+TGG 0.569883 8:+81610161 MsG0880047075.01.T01:CDS
CACATAGAAAACTTACCGCT+AGG 0.570475 8:+81611642 MsG0880047075.01.T01:CDS
AACCTTATTATAGCAAATGT+GGG 0.573393 8:+81611253 MsG0880047075.01.T01:CDS
AACCAGGGGTGTATAGGGTG+TGG 0.573399 8:+81611525 MsG0880047075.01.T01:CDS
CAATTGCATAGCAAAATAGC+TGG 0.575068 8:-81610114 None:intergenic
GGATAATAGTAAGAATAGCT+TGG 0.590853 8:+81610470 MsG0880047075.01.T01:CDS
AATTGCTGACATATCATCCA+TGG 0.591732 8:-81611928 None:intergenic
ACATAGAAAACTTACCGCTA+GGG 0.593029 8:+81611643 MsG0880047075.01.T01:CDS
GCAAGTTTAGTGGTTAGGAG+TGG 0.595366 8:-81611984 None:intergenic
TATCCAACAACTCTACTCTC+CGG 0.596888 8:-81610452 None:intergenic
TTTGATGGGCATGGTCCTTG+GGG 0.602574 8:+81610057 MsG0880047075.01.T01:CDS
TATAGGGTGTGGATGCCAAA+TGG 0.605038 8:+81611536 MsG0880047075.01.T01:CDS
AGACCGTCTTATTGTTTGGG+AGG 0.605100 8:+81609902 MsG0880047075.01.T01:CDS
TGGAGTTGTTAAGGCCAACA+AGG 0.609201 8:+81609827 MsG0880047075.01.T01:CDS
GGGATTGATTCCTTTCAAAG+TGG 0.611395 8:+81610276 MsG0880047075.01.T01:CDS
ATGCCAAATGGTAAAACACC+AGG 0.612359 8:+81611548 MsG0880047075.01.T01:CDS
CAAGATTTGAAGCAGCACAC+CGG 0.623026 8:+81610255 MsG0880047075.01.T01:CDS
TTGGCTACAAAATGTCCCCA+AGG 0.629406 8:-81610072 None:intergenic
AAAATGTTGGTCCTACAACA+TGG 0.633014 8:+81610388 MsG0880047075.01.T01:CDS
GGATGATGCAAGAAAAGCTG+TGG 0.633446 8:+81609755 MsG0880047075.01.T01:CDS
ACTTTGAAAGGAATCAATCC+CGG 0.636400 8:-81610274 None:intergenic
TTTGTATGAAAGATGAACCA+GGG 0.637317 8:+81611510 MsG0880047075.01.T01:CDS
CTTCATACAATAGTCACCAA+AGG 0.639144 8:-81611588 None:intergenic
CGTGTTAGCAACAACATCAG+AGG 0.654501 8:+81611288 MsG0880047075.01.T01:CDS
GGATGTTGTATCCAACGAAG+AGG 0.662158 8:+81611806 MsG0880047075.01.T01:CDS
TTAGCAACAACATCAGAGGA+TGG 0.662807 8:+81611292 MsG0880047075.01.T01:CDS
TATCATCTTAGCAACAGATG+GGG 0.672810 8:+81611673 MsG0880047075.01.T01:CDS
TTGTATGAAAGATGAACCAG+GGG 0.674425 8:+81611511 MsG0880047075.01.T01:CDS
ATACCTCCCAAACAATAAGA+CGG 0.684789 8:-81609905 None:intergenic
GTTGGCCTTAACAACTCCAG+AGG 0.685612 8:-81609823 None:intergenic
GATGATAAATTGATCCCTAG+CGG 0.690798 8:-81611657 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTGAATTCAATTTTTTT+AGG - Chr8:81611197-81611216 None:intergenic 10.0%
!!! ATTTAAAATTCAAATCGAAT+TGG + Chr8:81610861-81610880 MsG0880047075.01.T01:intron 15.0%
!!! TATTTGTTATGAATATTTCA+GGG + Chr8:81611226-81611245 MsG0880047075.01.T01:intron 15.0%
!!! TTATCTTTTTTAAATGTTTG+AGG + Chr8:81611749-81611768 MsG0880047075.01.T01:intron 15.0%
!! AAACACCACATAAATAAATT+AGG + Chr8:81610768-81610787 MsG0880047075.01.T01:intron 20.0%
!! AAGTATATAGTATTTGTTCA+AGG + Chr8:81611414-81611433 MsG0880047075.01.T01:intron 20.0%
!! TAATTTATTTATGTGGTGTT+TGG - Chr8:81610769-81610788 None:intergenic 20.0%
!! TATTTGAATCTTGAAAATGT+TGG + Chr8:81610375-81610394 MsG0880047075.01.T01:CDS 20.0%
!!! GTATTTGTTATGAATATTTC+AGG + Chr8:81611225-81611244 MsG0880047075.01.T01:intron 20.0%
!!! TATTAATTTCCTAACTCTTT+TGG - Chr8:81610094-81610113 None:intergenic 20.0%
!!! TCATGTAATTTGCTATTTTT+AGG + Chr8:81610342-81610361 MsG0880047075.01.T01:CDS 20.0%
! AAACCTTATTATAGCAAATG+TGG + Chr8:81611252-81611271 MsG0880047075.01.T01:CDS 25.0%
! AACAAAACTATTATCCTTGT+TGG - Chr8:81609844-81609863 None:intergenic 25.0%
! AACCTTATTATAGCAAATGT+GGG + Chr8:81611253-81611272 MsG0880047075.01.T01:CDS 25.0%
! AATTGACCTAGATATAAAGA+TGG + Chr8:81610161-81610180 MsG0880047075.01.T01:CDS 25.0%
! ACTTCTTATGTTATATGAGT+GGG - Chr8:81611398-81611417 None:intergenic 25.0%
! CATTGAAATTGAACAATAGA+TGG - Chr8:81610918-81610937 None:intergenic 25.0%
! GCTATAGATTAGATTAATGT+AGG + Chr8:81609955-81609974 MsG0880047075.01.T01:intron 25.0%
! TAAATCTCACTTGGTAAATT+TGG - Chr8:81611355-81611374 None:intergenic 25.0%
! TAACATATTGTCGACAAATA+AGG + Chr8:81611106-81611125 MsG0880047075.01.T01:intron 25.0%
! TACTTCTTATGTTATATGAG+TGG - Chr8:81611399-81611418 None:intergenic 25.0%
! TCGACAAATAAGGAATTATA+AGG + Chr8:81611116-81611135 MsG0880047075.01.T01:intron 25.0%
!! TAAGGTTGATTTAGTTGTTA+AGG + Chr8:81611134-81611153 MsG0880047075.01.T01:intron 25.0%
!!! TCTAATTAATTTGTTGCTGA+TGG + Chr8:81609992-81610011 MsG0880047075.01.T01:intron 25.0%
!!! TTAGTTTTATCCTATGTTAG+AGG - Chr8:81610554-81610573 None:intergenic 25.0%
!!! TTTTTTGTTGATTTCAGATG+AGG + Chr8:81611454-81611473 MsG0880047075.01.T01:intron 25.0%
AAACGTTTGTTCCAATGAAT+TGG + Chr8:81610601-81610620 MsG0880047075.01.T01:intron 30.0%
ATAAAGAAAAAGCAGGTGAA+AGG + Chr8:81611856-81611875 MsG0880047075.01.T01:CDS 30.0%
ATATTCATGGTTTAGACCTA+TGG + Chr8:81610196-81610215 MsG0880047075.01.T01:CDS 30.0%
ATGCAATTGGCAAAAAAATC+TGG + Chr8:81610128-81610147 MsG0880047075.01.T01:CDS 30.0%
CACTGTTTCAAAATTGATAG+TGG + Chr8:81611061-81611080 MsG0880047075.01.T01:intron 30.0%
CAGCACCTAATTTATTTATG+TGG - Chr8:81610776-81610795 None:intergenic 30.0%
GAACGCATAAAAGAATCAAA+AGG + Chr8:81611479-81611498 MsG0880047075.01.T01:CDS 30.0%
GAAGCTGACAAAAATATTCA+TGG + Chr8:81610183-81610202 MsG0880047075.01.T01:CDS 30.0%
GAATGGAAAAGAAAAAGAAG+TGG + Chr8:81611900-81611919 MsG0880047075.01.T01:CDS 30.0%
GGATAATAGTAAGAATAGCT+TGG + Chr8:81610470-81610489 MsG0880047075.01.T01:CDS 30.0%
GTTGTTAAGGCGAAAAATTA+AGG + Chr8:81611147-81611166 MsG0880047075.01.T01:intron 30.0%
TAGCATCTAACAAATGATGT+CGG - Chr8:81610815-81610834 None:intergenic 30.0%
TTAGTATATCGTTACGTCTT+AGG + Chr8:81611779-81611798 MsG0880047075.01.T01:intron 30.0%
TTATCATCTTAGCAACAGAT+GGG + Chr8:81611672-81611691 MsG0880047075.01.T01:CDS 30.0%
TTTATCATCTTAGCAACAGA+TGG + Chr8:81611671-81611690 MsG0880047075.01.T01:CDS 30.0%
TTTGTATGAAAGATGAACCA+GGG + Chr8:81611510-81611529 MsG0880047075.01.T01:CDS 30.0%
! ATTTTGTAGCCAAAAGAGTT+AGG + Chr8:81610082-81610101 MsG0880047075.01.T01:CDS 30.0%
! GAAAGAGAAGAATTTTCGAA+AGG + Chr8:81609734-81609753 MsG0880047075.01.T01:CDS 30.0%
! GAAGCTATCTTTTGTAACTT+TGG - Chr8:81610690-81610709 None:intergenic 30.0%
! TATGTTATATGAGTGGGTTT+AGG - Chr8:81611392-81611411 None:intergenic 30.0%
! TTTTGTATGAAAGATGAACC+AGG + Chr8:81611509-81611528 MsG0880047075.01.T01:CDS 30.0%
!! AGCAGCAAATGTTTTTATGT+AGG - Chr8:81610229-81610248 None:intergenic 30.0%
!! ATGTTTTGTGGAGTATTTGA+TGG + Chr8:81610042-81610061 MsG0880047075.01.T01:CDS 30.0%
!! ATTAATTTGTTGCTGATGGT+AGG + Chr8:81609996-81610015 MsG0880047075.01.T01:intron 30.0%
!! CAAAATTGATAGTGGTAAGA+GGG + Chr8:81611069-81611088 MsG0880047075.01.T01:intron 30.0%
!! TAAATTTGGTTTGAAGTCAG+TGG - Chr8:81611341-81611360 None:intergenic 30.0%
!! TCAAAATTGATAGTGGTAAG+AGG + Chr8:81611068-81611087 MsG0880047075.01.T01:intron 30.0%
!! TGTTTTGTGGAGTATTTGAT+GGG + Chr8:81610043-81610062 MsG0880047075.01.T01:CDS 30.0%
!!! GTTTCTGTTTTTACACATAG+AGG + Chr8:81609861-81609880 MsG0880047075.01.T01:CDS 30.0%
AAAATGTTGGTCCTACAACA+TGG + Chr8:81610388-81610407 MsG0880047075.01.T01:CDS 35.0%
AAGAAAAGCTGTGGAAGAAT+TGG + Chr8:81609764-81609783 MsG0880047075.01.T01:CDS 35.0%
AATCAGCAAGTTTAGTGGTT+AGG - Chr8:81611992-81612011 None:intergenic 35.0%
AATTGCTGACATATCATCCA+TGG - Chr8:81611931-81611950 None:intergenic 35.0%
ACATAGAAAACTTACCGCTA+GGG + Chr8:81611643-81611662 MsG0880047075.01.T01:CDS 35.0%
AGATAGCTTCACAGATTTCA+CGG + Chr8:81610700-81610719 MsG0880047075.01.T01:intron 35.0%
ATACAAACTATGCAGTGCAA+TGG - Chr8:81611037-81611056 None:intergenic 35.0%
ATACCTCCCAAACAATAAGA+CGG - Chr8:81609908-81609927 None:intergenic 35.0%
CAATTGCATAGCAAAATAGC+TGG - Chr8:81610117-81610136 None:intergenic 35.0%
CACAAAACATCATGTCTTGT+TGG - Chr8:81610032-81610051 None:intergenic 35.0%
CAGCTTCCATCTTTATATCT+AGG - Chr8:81610170-81610189 None:intergenic 35.0%
CTATTTCATTGCTTTGATCG+CGG + Chr8:81610944-81610963 MsG0880047075.01.T01:intron 35.0%
CTTCATACAATAGTCACCAA+AGG - Chr8:81611591-81611610 None:intergenic 35.0%
GACTATTGTATGAAGGACTA+TGG + Chr8:81611596-81611615 MsG0880047075.01.T01:CDS 35.0%
GATGATAAATTGATCCCTAG+CGG - Chr8:81611660-81611679 None:intergenic 35.0%
TATCATCTTAGCAACAGATG+GGG + Chr8:81611673-81611692 MsG0880047075.01.T01:CDS 35.0%
TGGAAGAGTGATGAAAAAAG+AGG - Chr8:81611956-81611975 None:intergenic 35.0%
TTATGTAGGATTGCTTCCAT+AGG - Chr8:81610215-81610234 None:intergenic 35.0%
TTGAACATTGACCATGTTGT+AGG - Chr8:81610402-81610421 None:intergenic 35.0%
TTGTATGAAAGATGAACCAG+GGG + Chr8:81611511-81611530 MsG0880047075.01.T01:CDS 35.0%
TTTACACATAGAGGCCAAAA+AGG + Chr8:81609870-81609889 MsG0880047075.01.T01:CDS 35.0%
TTTATCCTATGTTAGAGGTG+AGG - Chr8:81610549-81610568 None:intergenic 35.0%
! AATCCTGGTGTTTTACCATT+TGG - Chr8:81611554-81611573 None:intergenic 35.0%
! ACTTTGAAAGGAATCAATCC+CGG - Chr8:81610277-81610296 None:intergenic 35.0%
! AGCTTTGACAATCATCAAAC+AGG + Chr8:81610305-81610324 MsG0880047075.01.T01:CDS 35.0%
! AGTTTTCTATGTGTCACATC+TGG - Chr8:81611635-81611654 None:intergenic 35.0%
! CAACAAGACATGATGTTTTG+TGG + Chr8:81610030-81610049 MsG0880047075.01.T01:CDS 35.0%
! CATTTCCCATCTTTTGTCAA+CGG + Chr8:81609687-81609706 MsG0880047075.01.T01:CDS 35.0%
! CTTTGGTGACTATTGTATGA+AGG + Chr8:81611589-81611608 MsG0880047075.01.T01:CDS 35.0%
! GAATTGTTATTGAGTTCCTC+TGG + Chr8:81609807-81609826 MsG0880047075.01.T01:CDS 35.0%
! TTAGCAATATCTAGAGCCTT+TGG + Chr8:81611572-81611591 MsG0880047075.01.T01:CDS 35.0%
! TTTTCTTTTCCATTCACGCA+TGG - Chr8:81611895-81611914 None:intergenic 35.0%
!! CACCCACATTTGCTATAATA+AGG - Chr8:81611258-81611277 None:intergenic 35.0%
!! CAGCTATTTTGCTATGCAAT+TGG + Chr8:81610115-81610134 MsG0880047075.01.T01:CDS 35.0%
!! TAAGAATAGCTTGGTGCTTA+GGG + Chr8:81610479-81610498 MsG0880047075.01.T01:CDS 35.0%
!!! TCACCTGCTTTTTCTTTATG+TGG - Chr8:81611855-81611874 None:intergenic 35.0%
!!! TGCGTTTTAGAGTTTCTTGT+CGG + Chr8:81610982-81611001 MsG0880047075.01.T01:intron 35.0%
AAAAAGAAGTGGCATTGCCA+TGG + Chr8:81611911-81611930 MsG0880047075.01.T01:CDS 40.0%
ACGATTCAACAGATGGAACT+AGG + Chr8:81610884-81610903 MsG0880047075.01.T01:intron 40.0%
AGAGAGAGGTAAATCTCACT+TGG - Chr8:81611364-81611383 None:intergenic 40.0%
ATATCGTTACGTCTTAGGTG+TGG + Chr8:81611784-81611803 MsG0880047075.01.T01:intron 40.0%
ATGCCAAATGGTAAAACACC+AGG + Chr8:81611548-81611567 MsG0880047075.01.T01:CDS 40.0%
CACATAGAAAACTTACCGCT+AGG + Chr8:81611642-81611661 MsG0880047075.01.T01:CDS 40.0%
CCAATCCGTTGACAAAAGAT+GGG - Chr8:81609695-81609714 None:intergenic 40.0%
GAATTGGACGATTCAACAGA+TGG + Chr8:81610877-81610896 MsG0880047075.01.T01:intron 40.0%
GCACCACATAAAGAAAAAGC+AGG + Chr8:81611849-81611868 MsG0880047075.01.T01:CDS 40.0%
TATCCAACAACTCTACTCTC+CGG - Chr8:81610455-81610474 None:intergenic 40.0%
TATCGTTACGTCTTAGGTGT+GGG + Chr8:81611785-81611804 MsG0880047075.01.T01:intron 40.0%
TGTTGCTGATGGTAGGAATT+TGG + Chr8:81610003-81610022 MsG0880047075.01.T01:intron 40.0%
TTAGCAACAACATCAGAGGA+TGG + Chr8:81611292-81611311 MsG0880047075.01.T01:CDS 40.0%
! ACCAAGACCGTCTTATTGTT+TGG + Chr8:81609898-81609917 MsG0880047075.01.T01:CDS 40.0%
! CCAAGACCGTCTTATTGTTT+GGG + Chr8:81609899-81609918 MsG0880047075.01.T01:CDS 40.0%
! GCTCTAGATATTGCTAATCC+TGG - Chr8:81611569-81611588 None:intergenic 40.0%
! GGGATTGATTCCTTTCAAAG+TGG + Chr8:81610276-81610295 MsG0880047075.01.T01:CDS 40.0%
! TCATGCGTTGTGTTGTCTTT+TGG - Chr8:81610662-81610681 None:intergenic 40.0%
!! AGCTCTAGACACCAATTCAT+TGG - Chr8:81610615-81610634 None:intergenic 40.0%
!! GTAAGAATAGCTTGGTGCTT+AGG + Chr8:81610478-81610497 MsG0880047075.01.T01:CDS 40.0%
AAGTCAGTGGTAAGCTGAAG+TGG - Chr8:81611328-81611347 None:intergenic 45.0%
AATCTTCACTGCCTCTTCGT+TGG - Chr8:81611820-81611839 None:intergenic 45.0%
ACTTACGGGGTTGAGTGATA+AGG + Chr8:81610507-81610526 MsG0880047075.01.T01:intron 45.0%
AGTTTAGTGGTTAGGAGTGG+AGG - Chr8:81611984-81612003 None:intergenic 45.0%
ATTTCACGGTGACAACACCT+TGG + Chr8:81610714-81610733 MsG0880047075.01.T01:intron 45.0%
CCCAAACAATAAGACGGTCT+TGG - Chr8:81609902-81609921 None:intergenic 45.0%
CGTGTTAGCAACAACATCAG+AGG + Chr8:81611288-81611307 MsG0880047075.01.T01:CDS 45.0%
CTCACAATTCTCATGTCCCA+AGG - Chr8:81610734-81610753 None:intergenic 45.0%
GCAAGTTTAGTGGTTAGGAG+TGG - Chr8:81611987-81612006 None:intergenic 45.0%
GCCAATCCGTTGACAAAAGA+TGG - Chr8:81609696-81609715 None:intergenic 45.0%
GGATGATGCAAGAAAAGCTG+TGG + Chr8:81609755-81609774 MsG0880047075.01.T01:CDS 45.0%
GGATGTTGTATCCAACGAAG+AGG + Chr8:81611806-81611825 MsG0880047075.01.T01:CDS 45.0%
TATAGGGTGTGGATGCCAAA+TGG + Chr8:81611536-81611555 MsG0880047075.01.T01:CDS 45.0%
TCGATCCTCACCTCTAACAT+AGG + Chr8:81610541-81610560 MsG0880047075.01.T01:intron 45.0%
TGAAGTATGCCATGCGTGAA+TGG + Chr8:81611883-81611902 MsG0880047075.01.T01:CDS 45.0%
TGGAGTTGTTAAGGCCAACA+AGG + Chr8:81609827-81609846 MsG0880047075.01.T01:CDS 45.0%
TTGGCTACAAAATGTCCCCA+AGG - Chr8:81610075-81610094 None:intergenic 45.0%
TTTCACGGTGACAACACCTT+GGG + Chr8:81610715-81610734 MsG0880047075.01.T01:intron 45.0%
! AAGATGAACCAGGGGTGTAT+AGG + Chr8:81611519-81611538 MsG0880047075.01.T01:CDS 45.0%
! AAGATTTGAAGCAGCACACC+GGG + Chr8:81610256-81610275 MsG0880047075.01.T01:CDS 45.0%
! AGACCGTCTTATTGTTTGGG+AGG + Chr8:81609902-81609921 MsG0880047075.01.T01:CDS 45.0%
! AGATGAACCAGGGGTGTATA+GGG + Chr8:81611520-81611539 MsG0880047075.01.T01:CDS 45.0%
! ATTTGATGGGCATGGTCCTT+GGG + Chr8:81610056-81610075 MsG0880047075.01.T01:CDS 45.0%
! CAAGATTTGAAGCAGCACAC+CGG + Chr8:81610255-81610274 MsG0880047075.01.T01:CDS 45.0%
! CCCATCTTTTGTCAACGGAT+TGG + Chr8:81609692-81609711 MsG0880047075.01.T01:CDS 45.0%
! TATTTGATGGGCATGGTCCT+TGG + Chr8:81610055-81610074 MsG0880047075.01.T01:CDS 45.0%
! TGTGGAGTATTTGATGGGCA+TGG + Chr8:81610048-81610067 MsG0880047075.01.T01:CDS 45.0%
! TGTTTGGGAGGTATGCAATC+AGG + Chr8:81609914-81609933 MsG0880047075.01.T01:intron 45.0%
!! AATAGCTTGGTGCTTAGGGT+GGG + Chr8:81610483-81610502 MsG0880047075.01.T01:intron 45.0%
!! AGCTGTAGTGCCACTTTGAA+AGG - Chr8:81610289-81610308 None:intergenic 45.0%
!! GAGTTCCTCTGGAGTTGTTA+AGG + Chr8:81609818-81609837 MsG0880047075.01.T01:CDS 45.0%
!! GGGTTTAGGTTGTAAGAGAG+AGG - Chr8:81611378-81611397 None:intergenic 45.0%
!! GGTCTTGGTTGACTCCTTTT+TGG - Chr8:81609887-81609906 None:intergenic 45.0%
GCATTGCCAACTTCACTGTC+CGG + Chr8:81610433-81610452 MsG0880047075.01.T01:CDS 50.0%
TACTCTCCGGACAGTGAAGT+TGG - Chr8:81610442-81610461 None:intergenic 50.0%
TGTCCGGAGAGTAGAGTTGT+TGG + Chr8:81610449-81610468 MsG0880047075.01.T01:CDS 50.0%
! TTTGATGGGCATGGTCCTTG+GGG + Chr8:81610057-81610076 MsG0880047075.01.T01:CDS 50.0%
!! ATAGCTTGGTGCTTAGGGTG+GGG + Chr8:81610484-81610503 MsG0880047075.01.T01:intron 50.0%
!! CGGTGTGCTGCTTCAAATCT+TGG - Chr8:81610257-81610276 None:intergenic 50.0%
!! GAATAGCTTGGTGCTTAGGG+TGG + Chr8:81610482-81610501 MsG0880047075.01.T01:intron 50.0%
!! GTTGGCCTTAACAACTCCAG+AGG - Chr8:81609826-81609845 None:intergenic 50.0%
AGTGGTTAGGAGTGGAGGAG+AGG - Chr8:81611979-81611998 None:intergenic 55.0%
ATCCACACCCTATACACCCC+TGG - Chr8:81611530-81611549 None:intergenic 55.0%
GTGCTTAGGGTGGGGACTTA+CGG + Chr8:81610492-81610511 MsG0880047075.01.T01:intron 55.0%
TGCTTAGGGTGGGGACTTAC+GGG + Chr8:81610493-81610512 MsG0880047075.01.T01:intron 55.0%
! AACCAGGGGTGTATAGGGTG+TGG + Chr8:81611525-81611544 MsG0880047075.01.T01:CDS 55.0%
GCTTAGGGTGGGGACTTACG+GGG + Chr8:81610494-81610513 MsG0880047075.01.T01:intron 60.0%
GGTTAGGAGTGGAGGAGAGG+TGG - Chr8:81611976-81611995 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 81609678 81612013 81609678 ID=MsG0880047075.01;Name=MsG0880047075.01
Chr8 mRNA 81609678 81612013 81609678 ID=MsG0880047075.01.T01;Parent=MsG0880047075.01;Name=MsG0880047075.01.T01;_AED=0.49;_eAED=0.55;_QI=0|0|0|1|1|1|5|0|427
Chr8 exon 81609678 81609923 81609678 ID=MsG0880047075.01.T01:exon:34997;Parent=MsG0880047075.01.T01
Chr8 exon 81610018 81610500 81610018 ID=MsG0880047075.01.T01:exon:34998;Parent=MsG0880047075.01.T01
Chr8 exon 81611247 81611364 81611247 ID=MsG0880047075.01.T01:exon:34999;Parent=MsG0880047075.01.T01
Chr8 exon 81611471 81611694 81611471 ID=MsG0880047075.01.T01:exon:35000;Parent=MsG0880047075.01.T01
Chr8 exon 81611801 81612013 81611801 ID=MsG0880047075.01.T01:exon:35001;Parent=MsG0880047075.01.T01
Chr8 CDS 81609678 81609923 81609678 ID=MsG0880047075.01.T01:cds;Parent=MsG0880047075.01.T01
Chr8 CDS 81610018 81610500 81610018 ID=MsG0880047075.01.T01:cds;Parent=MsG0880047075.01.T01
Chr8 CDS 81611247 81611364 81611247 ID=MsG0880047075.01.T01:cds;Parent=MsG0880047075.01.T01
Chr8 CDS 81611471 81611694 81611471 ID=MsG0880047075.01.T01:cds;Parent=MsG0880047075.01.T01
Chr8 CDS 81611801 81612013 81611801 ID=MsG0880047075.01.T01:cds;Parent=MsG0880047075.01.T01
Gene Sequence

>MsG0880047075.01.T01

ATCATGGTTCATTTCCCATCTTTTGTCAACGGATTGGCAAGAACTATGTCGATCAAGAAAGAGAAGAATTTTCGAAAGGATGATGCAAGAAAAGCTGTGGAAGAATTGGCAAAAGAAGCAAGAAAGAATGAATTGTTATTGAGTTCCTCTGGAGTTGTTAAGGCCAACAAGGATAATAGTTTTGTTTCTGTTTTTACACATAGAGGCCAAAAAGGAGTCAACCAAGACCGTCTTATTGTTTGGGAGGAATTTGGATGCCAACAAGACATGATGTTTTGTGGAGTATTTGATGGGCATGGTCCTTGGGGACATTTTGTAGCCAAAAGAGTTAGGAAATTAATACCAGCTATTTTGCTATGCAATTGGCAAAAAAATCTGGCTGCAGCATCAATTGACCTAGATATAAAGATGGAAGCTGACAAAAATATTCATGGTTTAGACCTATGGAAGCAATCCTACATAAAAACATTTGCTGCTGTTGACCAAGATTTGAAGCAGCACACCGGGATTGATTCCTTTCAAAGTGGCACTACAGCTTTGACAATCATCAAACAGGTCATATATCTATACTCATGTAATTTGCTATTTTTAGGTATTGATACTTATTTGAATCTTGAAAATGTTGGTCCTACAACATGGTCAATGTTCAATTATTACTGCAGCATTGCCAACTTCACTGTCCGGAGAGTAGAGTTGTTGGATAATAGTAAGAATAGCTTGGTGCTTAGGGGTGAAAACCTTATTATAGCAAATGTGGGTGACTCAAGACTCGTGTTAGCAACAACATCAGAGGATGGCACATTATTTCCACTTCAGCTTACCACTGACTTCAAACCAAATTTACCAAATGAGGCAGAACGCATAAAAGAATCAAAAGGACGTGTATTTTGTATGAAAGATGAACCAGGGGTGTATAGGGTGTGGATGCCAAATGGTAAAACACCAGGATTAGCAATATCTAGAGCCTTTGGTGACTATTGTATGAAGGACTATGGTCTAATCTCTGTGCCAGATGTGACACATAGAAAACTTACCGCTAGGGATCAATTTATCATCTTAGCAACAGATGGGGTGTGGGATGTTGTATCCAACGAAGAGGCAGTGAAGATTGTTTGTGCAGCACCACATAAAGAAAAAGCAGGTGAAAGGCTTGTGAAGTATGCCATGCGTGAATGGAAAAGAAAAAGAAGTGGCATTGCCATGGATGATATGTCAGCAATTTGCCTCTTTTTTCATCACTCTTCCACCTCTCCTCCACTCCTAACCACTAAACTTGCTGATTAA
Protein sequence

>MsG0880047075.01.T01

IMVHFPSFVNGLARTMSIKKEKNFRKDDARKAVEELAKEARKNELLLSSSGVVKANKDNSFVSVFTHRGQKGVNQDRLIVWEEFGCQQDMMFCGVFDGHGPWGHFVAKRVRKLIPAILLCNWQKNLAAASIDLDIKMEADKNIHGLDLWKQSYIKTFAAVDQDLKQHTGIDSFQSGTTALTIIKQVIYLYSCNLLFLGIDTYLNLENVGPTTWSMFNYYCSIANFTVRRVELLDNSKNSLVLRGENLIIANVGDSRLVLATTSEDGTLFPLQLTTDFKPNLPNEAERIKESKGRVFCMKDEPGVYRVWMPNGKTPGLAISRAFGDYCMKDYGLISVPDVTHRKLTARDQFIILATDGVWDVVSNEEAVKIVCAAPHKEKAGERLVKYAMREWKRKRSGIAMDDMSAICLFFHHSSTSPPLLTTKLAD*