AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047155.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047155.01.T01 MTR_4g122030 74.278 381 35 4 10 387 1 321 0.0 542
MsG0880047155.01.T01 MTR_3g465010 37.766 376 202 13 22 388 8 360 3.03e-70 226
MsG0880047155.01.T01 MTR_4g007130 35.372 376 219 9 17 388 20 375 4.35e-62 206
MsG0880047155.01.T01 MTR_5g015810 34.026 385 227 10 16 387 5 375 2.41e-56 190
MsG0880047155.01.T01 MTR_4g095700 33.077 390 226 10 20 387 7 383 4.60e-56 190
MsG0880047155.01.T01 MTR_5g015810 32.797 311 189 6 90 387 1 304 4.84e-39 142
MsG0880047155.01.T01 MTR_5g015810 32.197 264 172 4 124 387 2 258 4.97e-32 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047155.01.T01 AT4G37580 34.805 385 221 11 21 387 3 375 1.90e-62 206
MsG0880047155.01.T01 AT2G23060 33.079 393 226 11 20 387 5 385 6.10e-60 200
MsG0880047155.01.T01 AT2G30090 33.943 383 201 17 22 388 15 361 7.20e-51 176
MsG0880047155.01.T01 AT5G67430 32.895 380 217 11 20 387 8 361 5.80e-49 171
MsG0880047155.01.T01 AT4G37580 32.919 322 192 7 83 387 4 318 7.92e-48 166
MsG0880047155.01.T01 AT5G67430 31.488 289 184 6 100 388 23 297 1.42e-34 130
MsG0880047155.01.T01 AT2G23060 29.457 258 172 5 133 387 1 251 1.54e-30 119

Find 82 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACACGACATAGAATCAATT+TGG 0.195424 8:-82751186 None:intergenic
AAAAGTGTGCAAACTCCTTC+TGG 0.261524 8:+82750104 MsG0880047155.01.T01:CDS
GAGCTTGTTGGAGTTGTTAA+AGG 0.270934 8:+82750074 MsG0880047155.01.T01:CDS
GATTAATGGGACTACTAAAA+AGG 0.272190 8:+82749787 MsG0880047155.01.T01:CDS
AGGGTTGTTATAACTGAGTT+AGG 0.299823 8:+82751133 MsG0880047155.01.T01:CDS
GCGACCCTTTATCTAGGATT+AGG 0.304028 8:+82749843 MsG0880047155.01.T01:CDS
AGTTGCATTTGTTGGTGAAT+AGG 0.308058 8:-82750550 None:intergenic
TTTCAAGATTCTTGTGTAGA+AGG 0.309351 8:-82750687 None:intergenic
TAGAACCTAATCCTAGATAA+AGG 0.318214 8:-82749848 None:intergenic
ATCTAATGGATACAACTCTT+TGG 0.333407 8:-82750711 None:intergenic
AGGAACTGTACTGAGATTAA+TGG 0.340573 8:+82749773 MsG0880047155.01.T01:CDS
TTCTTAGAAATGTGGTTTGT+TGG 0.348075 8:-82750623 None:intergenic
ATGTGTAACAACAGTACATT+TGG 0.356097 8:+82751004 MsG0880047155.01.T01:CDS
ACACGACATAGAATCAATTT+GGG 0.376317 8:-82751185 None:intergenic
AGAATAATGTCCATATCTAA+TGG 0.380464 8:-82750725 None:intergenic
GCGGGCTAATGGAATCAATA+TGG 0.381668 8:+82751071 MsG0880047155.01.T01:CDS
AGAGAATCTTGGCGGGCTAA+TGG 0.382594 8:+82751060 MsG0880047155.01.T01:CDS
TCTTAGAAATGTGGTTTGTT+GGG 0.383397 8:-82750622 None:intergenic
GTTATAACTGAGTTAGGGTT+TGG 0.401121 8:+82751139 MsG0880047155.01.T01:CDS
GGAACTGTACTGAGATTAAT+GGG 0.401226 8:+82749774 MsG0880047155.01.T01:CDS
TTCAAGATGGGTTGTATACT+AGG 0.416953 8:+82750134 MsG0880047155.01.T01:CDS
TGATGATGAAAATGATGAAT+TGG 0.425086 8:+82751248 MsG0880047155.01.T01:CDS
TGGAGGTTTACATCAAGATT+AGG 0.428439 8:+82751091 MsG0880047155.01.T01:CDS
CATGATAATTACCTGTGTAT+AGG 0.429059 8:-82750170 None:intergenic
TTCTGGATCACTCTTCAAGA+TGG 0.429973 8:+82750121 MsG0880047155.01.T01:CDS
ATTGAAATAGTTGCATTTGT+TGG 0.433692 8:-82750558 None:intergenic
GTTGAAAACAAGGAGCTTGT+TGG 0.434978 8:+82750062 MsG0880047155.01.T01:CDS
AGAGTTGTATCCATTAGATA+TGG 0.437070 8:+82750715 MsG0880047155.01.T01:CDS
AAATTTACTGTGCAGGAGAA+AGG 0.442722 8:+82750424 MsG0880047155.01.T01:intron
GTAATGGCGACCCTTTATCT+AGG 0.454793 8:+82749837 MsG0880047155.01.T01:CDS
CAAAATTATTTCAACCACTT+AGG 0.457975 8:+82750915 MsG0880047155.01.T01:CDS
GGGTTGTTATAACTGAGTTA+GGG 0.463044 8:+82751134 MsG0880047155.01.T01:CDS
CTATCCCCTTCGTGTTATGT+TGG 0.463391 8:+82749868 MsG0880047155.01.T01:CDS
TAGCATCCACTCTTCAATTG+AGG 0.471060 8:-82750468 None:intergenic
GTTAGTTATTACAAAGATGA+AGG 0.474099 8:+82750776 MsG0880047155.01.T01:CDS
CATGGAGAGGGAGAGAATCT+TGG 0.478715 8:+82751049 MsG0880047155.01.T01:CDS
TGTGTATAGGAGAGACTCTA+AGG 0.479289 8:-82750157 None:intergenic
AATAACTAACCCAAGTTCCT+AGG 0.480250 8:-82750763 None:intergenic
TCTGGATCACTCTTCAAGAT+GGG 0.484366 8:+82750122 MsG0880047155.01.T01:CDS
TAGAATCAATTTGGGGAACA+TGG 0.502073 8:-82751177 None:intergenic
AGAACCTAATCCTAGATAAA+GGG 0.503502 8:-82749847 None:intergenic
AATTTACTGTGCAGGAGAAA+GGG 0.506218 8:+82750425 MsG0880047155.01.T01:intron
TGTGTAACAACAGTACATTT+GGG 0.506653 8:+82751005 MsG0880047155.01.T01:CDS
AACAAACCACATTTCTAAGA+AGG 0.512894 8:+82750625 MsG0880047155.01.T01:CDS
TTCACCAACATGATGAGTAA+TGG 0.513298 8:+82749821 MsG0880047155.01.T01:CDS
TGGTTTGTTGGGAAACTAGC+TGG 0.518913 8:-82750611 None:intergenic
CTTTATGGACTTCATGGAGA+GGG 0.530822 8:+82751037 MsG0880047155.01.T01:CDS
GATAGAGACGTTAAAGTCGT+GGG 0.533046 8:+82749740 MsG0880047155.01.T01:CDS
AGCTGAGATGGTTGAAAACA+AGG 0.541254 8:+82750052 MsG0880047155.01.T01:CDS
AAAGTACAACAAGCTCATCA+TGG 0.542735 8:+82750834 MsG0880047155.01.T01:CDS
AAAACTCAGCCTAGGAACTT+GGG 0.550630 8:+82750754 MsG0880047155.01.T01:CDS
AAGTCGTGGGGAAGCTTGAA+AGG 0.552257 8:+82749753 MsG0880047155.01.T01:CDS
TGACATCCTTCTTAGAAATG+TGG 0.553319 8:-82750631 None:intergenic
TGGGGAACATGGTTTACAAG+TGG 0.563020 8:-82751166 None:intergenic
TGATGAAAATGATGAATTGG+TGG 0.563601 8:+82751251 MsG0880047155.01.T01:CDS
TTGGGAAACTAGCTGGTGGA+TGG 0.566056 8:-82750604 None:intergenic
GGAGAGGGAGAGAATCTTGG+CGG 0.572469 8:+82751052 MsG0880047155.01.T01:CDS
TGCTACATTAAATCATGCAA+AGG 0.583016 8:+82750946 MsG0880047155.01.T01:CDS
GAAGAGTGGATGCTAAGAAA+TGG 0.583171 8:+82750476 MsG0880047155.01.T01:CDS
CTGTGCAGGAGAAAGGGAGT+TGG 0.597746 8:+82750431 MsG0880047155.01.T01:intron
TATGTGGTACACAAAAGACT+TGG 0.602479 8:+82751216 MsG0880047155.01.T01:CDS
AGATAGAGACGTTAAAGTCG+TGG 0.605258 8:+82749739 MsG0880047155.01.T01:CDS
TGGCCTGCAGGTAGCTGAGA+TGG 0.614618 8:+82750040 MsG0880047155.01.T01:intron
GAGAGGGAGAGAATCTTGGC+GGG 0.615284 8:+82751053 MsG0880047155.01.T01:CDS
GTCGCCATTACTCATCATGT+TGG 0.618658 8:-82749825 None:intergenic
ACACACCAACATAACACGAA+GGG 0.618929 8:-82749873 None:intergenic
GTAGCATGAAGAAACCTAAG+TGG 0.624354 8:-82750929 None:intergenic
TTGTAACCTCAATTGAAGAG+TGG 0.632770 8:+82750462 MsG0880047155.01.T01:CDS
CACATACAGTATAGAGAGCG+AGG 0.638269 8:+82749694 MsG0880047155.01.T01:CDS
TGTCGTGTATTGATGATATG+TGG 0.645905 8:+82751200 MsG0880047155.01.T01:CDS
TCTTTATGGACTTCATGGAG+AGG 0.647924 8:+82751036 MsG0880047155.01.T01:CDS
TGAAAATGATGAATTGGTGG+AGG 0.648658 8:+82751254 MsG0880047155.01.T01:CDS
TTAGAGTCTCTCCTATACAC+AGG 0.650718 8:+82750159 MsG0880047155.01.T01:CDS
CACACCAACATAACACGAAG+GGG 0.668902 8:-82749872 None:intergenic
TACACACCAACATAACACGA+AGG 0.672948 8:-82749874 None:intergenic
GGCTAATGGAATCAATATGG+AGG 0.674786 8:+82751074 MsG0880047155.01.T01:CDS
ATGGAGATATATGATGAGTG+AGG 0.681980 8:-82750585 None:intergenic
GAGTCAAACATTCTCAAACA+AGG 0.685595 8:-82750980 None:intergenic
ATAGAGACGTTAAAGTCGTG+GGG 0.690689 8:+82749741 MsG0880047155.01.T01:CDS
TTTGTTGGGAAACTAGCTGG+TGG 0.692321 8:-82750608 None:intergenic
CACGACATAGAATCAATTTG+GGG 0.699468 8:-82751184 None:intergenic
ATCTTGAAGAGTGATCCAGA+AGG 0.751962 8:-82750119 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTTTGTTTTAACTTGA+AGG - Chr8:82750904-82750923 None:intergenic 15.0%
!! AAGATTAGGAGAAAAATTAA+AGG + Chr8:82751105-82751124 MsG0880047155.01.T01:CDS 20.0%
!! ACAGTAAATTTAATGTAATG+TGG - Chr8:82750415-82750434 None:intergenic 20.0%
!! ATATAATATATATACACCTG+CGG - Chr8:82749988-82750007 None:intergenic 20.0%
!!! TATATGATGATGATACATAA+TGG + Chr8:82750020-82750039 MsG0880047155.01.T01:intron 20.0%
! AGAATAATGTCCATATCTAA+TGG - Chr8:82750728-82750747 None:intergenic 25.0%
! ATTAATGGGACTACTAAAAA+GGG + Chr8:82749788-82749807 MsG0880047155.01.T01:CDS 25.0%
! ATTGAAATAGTTGCATTTGT+TGG - Chr8:82750561-82750580 None:intergenic 25.0%
! CAAAATTATTTCAACCACTT+AGG + Chr8:82750915-82750934 MsG0880047155.01.T01:CDS 25.0%
! GTTAGTTATTACAAAGATGA+AGG + Chr8:82750776-82750795 MsG0880047155.01.T01:CDS 25.0%
! TTACATTAAATTTACTGTGC+AGG + Chr8:82750417-82750436 MsG0880047155.01.T01:intron 25.0%
!! AAAGTTATCCCTAACTATTT+TGG + Chr8:82750311-82750330 MsG0880047155.01.T01:intron 25.0%
!! AGAAAAATTAAAGGAGTGTA+GGG + Chr8:82751114-82751133 MsG0880047155.01.T01:CDS 25.0%
!! TGATGATGAAAATGATGAAT+TGG + Chr8:82751248-82751267 MsG0880047155.01.T01:CDS 25.0%
!!! AAAGAGTATTTGATGAAAAG+AGG - Chr8:82749932-82749951 None:intergenic 25.0%
!!! TTTGGGTTTCTTTTTCTTTA+TGG + Chr8:82751022-82751041 MsG0880047155.01.T01:CDS 25.0%
ACACGACATAGAATCAATTT+GGG - Chr8:82751188-82751207 None:intergenic 30.0%
AGAACCTAATCCTAGATAAA+GGG - Chr8:82749850-82749869 None:intergenic 30.0%
AGAGTTGTATCCATTAGATA+TGG + Chr8:82750715-82750734 MsG0880047155.01.T01:CDS 30.0%
ATGTGTAACAACAGTACATT+TGG + Chr8:82751004-82751023 MsG0880047155.01.T01:CDS 30.0%
CATGATAATTACCTGTGTAT+AGG - Chr8:82750173-82750192 None:intergenic 30.0%
CTATACACAGGTAATTATCA+TGG + Chr8:82750171-82750190 MsG0880047155.01.T01:intron 30.0%
CTCTTTCAAATCTACTTTAC+TGG + Chr8:82749946-82749965 MsG0880047155.01.T01:intron 30.0%
GATTAATGGGACTACTAAAA+AGG + Chr8:82749787-82749806 MsG0880047155.01.T01:CDS 30.0%
TACACGACATAGAATCAATT+TGG - Chr8:82751189-82751208 None:intergenic 30.0%
TAGAACCTAATCCTAGATAA+AGG - Chr8:82749851-82749870 None:intergenic 30.0%
TGATGAAAATGATGAATTGG+TGG + Chr8:82751251-82751270 MsG0880047155.01.T01:CDS 30.0%
TGCTACATTAAATCATGCAA+AGG + Chr8:82750946-82750965 MsG0880047155.01.T01:CDS 30.0%
TGTGTAACAACAGTACATTT+GGG + Chr8:82751005-82751024 MsG0880047155.01.T01:CDS 30.0%
TTTCAAGATTCTTGTGTAGA+AGG - Chr8:82750690-82750709 None:intergenic 30.0%
! AACAAACCACATTTCTAAGA+AGG + Chr8:82750625-82750644 MsG0880047155.01.T01:CDS 30.0%
! ATCTAATGGATACAACTCTT+TGG - Chr8:82750714-82750733 None:intergenic 30.0%
! CATGGATCATTTTCAGTTTA+TGG + Chr8:82750852-82750871 MsG0880047155.01.T01:CDS 30.0%
! CTTTTTCTTTATGGACTTCA+TGG + Chr8:82751031-82751050 MsG0880047155.01.T01:CDS 30.0%
! GAGAAAAATTAAAGGAGTGT+AGG + Chr8:82751113-82751132 MsG0880047155.01.T01:CDS 30.0%
! TATTTTGTGACGCTATATAG+AGG - Chr8:82750232-82750251 None:intergenic 30.0%
! TTCTTAGAAATGTGGTTTGT+TGG - Chr8:82750626-82750645 None:intergenic 30.0%
!! TCTTAGAAATGTGGTTTGTT+GGG - Chr8:82750625-82750644 None:intergenic 30.0%
!!! ATGAGCTTGTTGTACTTTTA+TGG - Chr8:82750832-82750851 None:intergenic 30.0%
!!! TGAGCTTGTTGTACTTTTAT+GGG - Chr8:82750831-82750850 None:intergenic 30.0%
AAAGTACAACAAGCTCATCA+TGG + Chr8:82750834-82750853 MsG0880047155.01.T01:CDS 35.0%
AAATTTACTGTGCAGGAGAA+AGG + Chr8:82750424-82750443 MsG0880047155.01.T01:intron 35.0%
AATAACTAACCCAAGTTCCT+AGG - Chr8:82750766-82750785 None:intergenic 35.0%
AATTTACTGTGCAGGAGAAA+GGG + Chr8:82750425-82750444 MsG0880047155.01.T01:intron 35.0%
AGGAACTGTACTGAGATTAA+TGG + Chr8:82749773-82749792 MsG0880047155.01.T01:CDS 35.0%
AGGGTTGTTATAACTGAGTT+AGG + Chr8:82751133-82751152 MsG0880047155.01.T01:CDS 35.0%
ATGGAGATATATGATGAGTG+AGG - Chr8:82750588-82750607 None:intergenic 35.0%
CACGACATAGAATCAATTTG+GGG - Chr8:82751187-82751206 None:intergenic 35.0%
CACGACTAATACAATCTGTA+TGG - Chr8:82750360-82750379 None:intergenic 35.0%
GAGTCAAACATTCTCAAACA+AGG - Chr8:82750983-82751002 None:intergenic 35.0%
GGAACTGTACTGAGATTAAT+GGG + Chr8:82749774-82749793 MsG0880047155.01.T01:CDS 35.0%
GGGTTGTTATAACTGAGTTA+GGG + Chr8:82751134-82751153 MsG0880047155.01.T01:CDS 35.0%
GTTATAACTGAGTTAGGGTT+TGG + Chr8:82751139-82751158 MsG0880047155.01.T01:CDS 35.0%
TAGAATCAATTTGGGGAACA+TGG - Chr8:82751180-82751199 None:intergenic 35.0%
TATGTGGTACACAAAAGACT+TGG + Chr8:82751216-82751235 MsG0880047155.01.T01:CDS 35.0%
TCAAATATATATGTAGCCGC+AGG + Chr8:82749969-82749988 MsG0880047155.01.T01:intron 35.0%
TGAAAATGATGAATTGGTGG+AGG + Chr8:82751254-82751273 MsG0880047155.01.T01:CDS 35.0%
TGACATCCTTCTTAGAAATG+TGG - Chr8:82750634-82750653 None:intergenic 35.0%
TGGAGGTTTACATCAAGATT+AGG + Chr8:82751091-82751110 MsG0880047155.01.T01:CDS 35.0%
TTCACCAACATGATGAGTAA+TGG + Chr8:82749821-82749840 MsG0880047155.01.T01:CDS 35.0%
TTGTAACCTCAATTGAAGAG+TGG + Chr8:82750462-82750481 MsG0880047155.01.T01:CDS 35.0%
! AGTTGCATTTGTTGGTGAAT+AGG - Chr8:82750553-82750572 None:intergenic 35.0%
! TGTCGTGTATTGATGATATG+TGG + Chr8:82751200-82751219 MsG0880047155.01.T01:CDS 35.0%
! TGTTATTCTTTTCTGTGGCT+AGG - Chr8:82750517-82750536 None:intergenic 35.0%
!! CTTCTTTTTAGGGAGAAGAA+TGG + Chr8:82749667-82749686 MsG0880047155.01.T01:CDS 35.0%
!! GGCATTGTTATTCTTTTCTG+TGG - Chr8:82750522-82750541 None:intergenic 35.0%
!! GTTATCCCTAACTATTTTGG+TGG + Chr8:82750314-82750333 MsG0880047155.01.T01:intron 35.0%
!! GTTGGTGAATAGGTTTTTAG+AGG - Chr8:82750543-82750562 None:intergenic 35.0%
!! TTCAAGATGGGTTGTATACT+AGG + Chr8:82750134-82750153 MsG0880047155.01.T01:CDS 35.0%
AAAAACTCAGCCTAGGAACT+TGG + Chr8:82750753-82750772 MsG0880047155.01.T01:CDS 40.0%
AAAACTCAGCCTAGGAACTT+GGG + Chr8:82750754-82750773 MsG0880047155.01.T01:CDS 40.0%
ACACACCAACATAACACGAA+GGG - Chr8:82749876-82749895 None:intergenic 40.0%
AGATAGAGACGTTAAAGTCG+TGG + Chr8:82749739-82749758 MsG0880047155.01.T01:CDS 40.0%
AGCTGAGATGGTTGAAAACA+AGG + Chr8:82750052-82750071 MsG0880047155.01.T01:CDS 40.0%
ATAGAGACGTTAAAGTCGTG+GGG + Chr8:82749741-82749760 MsG0880047155.01.T01:CDS 40.0%
ATCTTGAAGAGTGATCCAGA+AGG - Chr8:82750122-82750141 None:intergenic 40.0%
CTCAAAGAAAAACTCAGCCT+AGG + Chr8:82750746-82750765 MsG0880047155.01.T01:CDS 40.0%
CTTTATGGACTTCATGGAGA+GGG + Chr8:82751037-82751056 MsG0880047155.01.T01:CDS 40.0%
GAAGAGTGGATGCTAAGAAA+TGG + Chr8:82750476-82750495 MsG0880047155.01.T01:CDS 40.0%
GATAGAGACGTTAAAGTCGT+GGG + Chr8:82749740-82749759 MsG0880047155.01.T01:CDS 40.0%
GGCTAATGGAATCAATATGG+AGG + Chr8:82751074-82751093 MsG0880047155.01.T01:CDS 40.0%
GTAGCATGAAGAAACCTAAG+TGG - Chr8:82750932-82750951 None:intergenic 40.0%
GTTGAAAACAAGGAGCTTGT+TGG + Chr8:82750062-82750081 MsG0880047155.01.T01:CDS 40.0%
TACACACCAACATAACACGA+AGG - Chr8:82749877-82749896 None:intergenic 40.0%
TAGCATCCACTCTTCAATTG+AGG - Chr8:82750471-82750490 None:intergenic 40.0%
TCTGGATCACTCTTCAAGAT+GGG + Chr8:82750122-82750141 MsG0880047155.01.T01:CDS 40.0%
TCTTTATGGACTTCATGGAG+AGG + Chr8:82751036-82751055 MsG0880047155.01.T01:CDS 40.0%
TGCGACCACCAAAATAGTTA+GGG - Chr8:82750322-82750341 None:intergenic 40.0%
TGTGTATAGGAGAGACTCTA+AGG - Chr8:82750160-82750179 None:intergenic 40.0%
TTAGAGTCTCTCCTATACAC+AGG + Chr8:82750159-82750178 MsG0880047155.01.T01:CDS 40.0%
TTCTGGATCACTCTTCAAGA+TGG + Chr8:82750121-82750140 MsG0880047155.01.T01:CDS 40.0%
! AAAAGTGTGCAAACTCCTTC+TGG + Chr8:82750104-82750123 MsG0880047155.01.T01:CDS 40.0%
! ATTCTTTTCTGTGGCTAGGA+AGG - Chr8:82750513-82750532 None:intergenic 40.0%
!! GAGCTTGTTGGAGTTGTTAA+AGG + Chr8:82750074-82750093 MsG0880047155.01.T01:CDS 40.0%
CACACCAACATAACACGAAG+GGG - Chr8:82749875-82749894 None:intergenic 45.0%
CACATACAGTATAGAGAGCG+AGG + Chr8:82749694-82749713 MsG0880047155.01.T01:CDS 45.0%
CTATCCCCTTCGTGTTATGT+TGG + Chr8:82749868-82749887 MsG0880047155.01.T01:CDS 45.0%
CTGCGACCACCAAAATAGTT+AGG - Chr8:82750323-82750342 None:intergenic 45.0%
GATGATACATAATGGCCTGC+AGG + Chr8:82750028-82750047 MsG0880047155.01.T01:intron 45.0%
GTAATGGCGACCCTTTATCT+AGG + Chr8:82749837-82749856 MsG0880047155.01.T01:CDS 45.0%
GTCGCCATTACTCATCATGT+TGG - Chr8:82749828-82749847 None:intergenic 45.0%
TGGGGAACATGGTTTACAAG+TGG - Chr8:82751169-82751188 None:intergenic 45.0%
TTTGTTGGGAAACTAGCTGG+TGG - Chr8:82750611-82750630 None:intergenic 45.0%
! GCGACCCTTTATCTAGGATT+AGG + Chr8:82749843-82749862 MsG0880047155.01.T01:CDS 45.0%
! GCGGGCTAATGGAATCAATA+TGG + Chr8:82751071-82751090 MsG0880047155.01.T01:CDS 45.0%
!! TGGTTTGTTGGGAAACTAGC+TGG - Chr8:82750614-82750633 None:intergenic 45.0%
AAGTCGTGGGGAAGCTTGAA+AGG + Chr8:82749753-82749772 MsG0880047155.01.T01:CDS 50.0%
CATGGAGAGGGAGAGAATCT+TGG + Chr8:82751049-82751068 MsG0880047155.01.T01:CDS 50.0%
TTGGGAAACTAGCTGGTGGA+TGG - Chr8:82750607-82750626 None:intergenic 50.0%
!! AGAGAATCTTGGCGGGCTAA+TGG + Chr8:82751060-82751079 MsG0880047155.01.T01:CDS 50.0%
CAACCATCTCAGCTACCTGC+AGG - Chr8:82750046-82750065 None:intergenic 55.0%
CTGTGCAGGAGAAAGGGAGT+TGG + Chr8:82750431-82750450 MsG0880047155.01.T01:intron 55.0%
GAGAGGGAGAGAATCTTGGC+GGG + Chr8:82751053-82751072 MsG0880047155.01.T01:CDS 55.0%
GGAGAGGGAGAGAATCTTGG+CGG + Chr8:82751052-82751071 MsG0880047155.01.T01:CDS 55.0%
TGGCCTGCAGGTAGCTGAGA+TGG + Chr8:82750040-82750059 MsG0880047155.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 82749659 82751279 82749659 ID=MsG0880047155.01;Name=MsG0880047155.01
Chr8 mRNA 82749659 82751279 82749659 ID=MsG0880047155.01.T01;Parent=MsG0880047155.01;Name=MsG0880047155.01.T01;_AED=0.02;_eAED=0.06;_QI=0|0|0|1|1|1|3|0|400
Chr8 exon 82749659 82749889 82749659 ID=MsG0880047155.01.T01:exon:20428;Parent=MsG0880047155.01.T01
Chr8 exon 82750050 82750180 82750050 ID=MsG0880047155.01.T01:exon:20429;Parent=MsG0880047155.01.T01
Chr8 exon 82750439 82751279 82750439 ID=MsG0880047155.01.T01:exon:20430;Parent=MsG0880047155.01.T01
Chr8 CDS 82749659 82749889 82749659 ID=MsG0880047155.01.T01:cds;Parent=MsG0880047155.01.T01
Chr8 CDS 82750050 82750180 82750050 ID=MsG0880047155.01.T01:cds;Parent=MsG0880047155.01.T01
Chr8 CDS 82750439 82751279 82750439 ID=MsG0880047155.01.T01:cds;Parent=MsG0880047155.01.T01
Gene Sequence

>MsG0880047155.01.T01

GTAGCTAGCTTCTTTTTAGGGAGAAGAATGGCTGACACATACAGTATAGAGAGCGAGGTTGTTATAAGAGAGTTTGATGAAGATAGAGACGTTAAAGTCGTGGGGAAGCTTGAAAGGAACTGTACTGAGATTAATGGGACTACTAAAAAGGGTTTCTCTATTTTCACCAACATGATGAGTAATGGCGACCCTTTATCTAGGATTAGGTTCTATCCCCTTCGTGTTATGTTGGTAGCTGAGATGGTTGAAAACAAGGAGCTTGTTGGAGTTGTTAAAGGATGCATTAAAAGTGTGCAAACTCCTTCTGGATCACTCTTCAAGATGGGTTGTATACTAGGCCTTAGAGTCTCTCCTATACACAGGAGAAAGGGAGTTGGACTAAAACTTGTAACCTCAATTGAAGAGTGGATGCTAAGAAATGGTGCTGATTATGCCTTCCTAGCCACAGAAAAGAATAACAATGCCTCTAAAAACCTATTCACCAACAAATGCAACTATTTCAATCTCACCTCACTCATCATATATCTCCATCCACCAGCTAGTTTCCCAACAAACCACATTTCTAAGAAGGATGTCAAAATTGACAAGATAAATATAGATCAAGCAATTTCCTTCTACACAAGAATCTTGAAAACCAAAGAGTTGTATCCATTAGATATGGACATTATTCTCAAAGAAAAACTCAGCCTAGGAACTTGGGTTAGTTATTACAAAGATGAAGGCTTCAAACTCAACATTGAAGATATTATTACCCATAAAAGTACAACAAGCTCATCATGGATCATTTTCAGTTTATGGAATACTTGTGAAGCTTGTGACAATAACCTTCAAGTTAAAACAAAATTATTTCAACCACTTAGGTTTCTTCATGCTACATTAAATCATGCAAAGGACAAAATATGTCCTTGTTTGAGAATGTTTGACTCAATGTGTAACAACAGTACATTTGGGTTTCTTTTTCTTTATGGACTTCATGGAGAGGGAGAGAATCTTGGCGGGCTAATGGAATCAATATGGAGGTTTACATCAAGATTAGGAGAAAAATTAAAGGAGTGTAGGGTTGTTATAACTGAGTTAGGGTTTGGTGATCCACTTGTAAACCATGTTCCCCAAATTGATTCTATGTCGTGTATTGATGATATGTGGTACACAAAAGACTTGGAAATCACAGTGATGATGAAAATGATGAATTGGTGGAGGTGA
Protein sequence

>MsG0880047155.01.T01

VASFFLGRRMADTYSIESEVVIREFDEDRDVKVVGKLERNCTEINGTTKKGFSIFTNMMSNGDPLSRIRFYPLRVMLVAEMVENKELVGVVKGCIKSVQTPSGSLFKMGCILGLRVSPIHRRKGVGLKLVTSIEEWMLRNGADYAFLATEKNNNASKNLFTNKCNYFNLTSLIIYLHPPASFPTNHISKKDVKIDKINIDQAISFYTRILKTKELYPLDMDIILKEKLSLGTWVSYYKDEGFKLNIEDIITHKSTTSSSWIIFSLWNTCEACDNNLQVKTKLFQPLRFLHATLNHAKDKICPCLRMFDSMCNNSTFGFLFLYGLHGEGENLGGLMESIWRFTSRLGEKLKECRVVITELGFGDPLVNHVPQIDSMSCIDDMWYTKDLEITVMMKMMNWWR*