AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047372.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047372.01.T01 MTR_4g125720 92.105 266 21 0 65 330 29 294 7.95e-179 496
MsG0880047372.01.T01 MTR_4g125720 92.308 208 16 0 65 272 29 236 6.35e-139 394
MsG0880047372.01.T01 MTR_5g099270 91.071 56 4 1 1 55 7 62 3.93e-30 110
MsG0880047372.01.T01 MTR_0025s0050 87.500 48 6 0 1 48 137 184 9.92e-23 94.4
MsG0880047372.01.T01 MTR_3g032450 85.106 47 7 0 1 47 1 47 9.55e-22 87.8
MsG0880047372.01.T01 MTR_7g018160 87.500 48 6 0 1 48 202 249 1.13e-21 93.6
MsG0880047372.01.T01 MTR_1g107470 89.362 47 5 0 1 47 311 357 3.71e-21 93.2
MsG0880047372.01.T01 MTR_3g034020 89.362 47 5 0 1 47 358 404 5.07e-21 93.6
MsG0880047372.01.T01 MTR_3g109050 87.234 47 6 0 1 47 129 175 6.32e-20 87.0
MsG0880047372.01.T01 MTR_1g047970 58.228 79 28 1 1 79 163 236 7.89e-20 90.9
MsG0880047372.01.T01 MTR_0550s0010 90.909 44 4 0 1 44 230 273 1.04e-19 87.8
MsG0880047372.01.T01 MTR_8g075630 88.636 44 5 0 1 44 145 188 1.75e-19 85.5
MsG0880047372.01.T01 MTR_0073s0030 88.636 44 5 0 1 44 145 188 1.80e-19 85.5
MsG0880047372.01.T01 MTR_3g081620 64.286 56 20 0 1 56 25 80 1.89e-19 82.0
MsG0880047372.01.T01 MTR_5g071420 85.106 47 6 1 1 47 170 215 5.64e-18 82.0
MsG0880047372.01.T01 MTR_7g046285 70.833 48 14 0 1 48 52 99 6.22e-17 77.0
MsG0880047372.01.T01 MTR_1g018670 80.952 42 8 0 6 47 13 54 1.14e-16 77.0
MsG0880047372.01.T01 MTR_2g013330 76.596 47 11 0 1 47 395 441 1.65e-16 80.5
MsG0880047372.01.T01 MTR_0022s0370 86.842 38 5 0 1 38 129 166 3.57e-15 72.8
MsG0880047372.01.T01 MTR_3g031910 87.500 40 5 0 1 40 282 321 7.36e-15 74.7
MsG0880047372.01.T01 MTR_4g076760 68.085 47 15 0 1 47 467 513 1.01e-14 75.1
MsG0880047372.01.T01 MTR_6g012610 65.957 47 16 0 1 47 47 93 1.40e-14 69.3
MsG0880047372.01.T01 MTR_0032s0020 70.213 47 14 0 1 47 535 581 1.56e-14 74.7
MsG0880047372.01.T01 MTR_4g010800 72.093 43 12 0 6 48 105 147 2.00e-14 70.5
MsG0880047372.01.T01 MTR_2g058900 72.500 40 11 0 7 46 71 110 5.72e-14 68.2
MsG0880047372.01.T01 MTR_2g016390 67.391 46 15 0 1 46 441 486 1.92e-13 71.6
MsG0880047372.01.T01 MTR_0296s0010 70.455 44 13 0 1 44 279 322 4.14e-13 69.7
MsG0880047372.01.T01 MTR_4g115110 63.830 47 17 0 1 47 105 151 6.98e-13 65.9
MsG0880047372.01.T01 MTR_7g113060 63.415 41 15 0 6 46 136 176 3.83e-12 64.7
MsG0880047372.01.T01 MTR_4g078000 72.093 43 10 1 6 48 107 147 5.67e-12 65.1
MsG0880047372.01.T01 MTR_4g134740 65.854 41 14 0 6 46 30 70 1.93e-11 60.8
MsG0880047372.01.T01 MTR_3g065720 57.778 45 19 0 6 50 10 54 2.21e-11 58.9
MsG0880047372.01.T01 MTR_7g052070 65.957 47 9 1 1 47 177 216 4.00e-11 62.4
MsG0880047372.01.T01 MTR_7g117425 81.818 33 6 0 1 33 156 188 6.06e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047372.01.T01 AT2G19385 48.699 269 113 7 65 330 29 275 4.49e-61 196
MsG0880047372.01.T01 AT2G19380 35.028 177 87 6 65 225 29 193 7.25e-19 87.8
MsG0880047372.01.T01 AT2G19380 44.578 83 44 1 114 196 207 287 3.19e-13 70.9

Find 78 sgRNAs with CRISPR-Local

Find 397 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATCAGTTGACGTGGAAAA+TGG 0.191316 8:+85375217 MsG0880047372.01.T01:CDS
GGAAAATGGGGAAGTATTTC+AGG 0.217234 8:+85375231 MsG0880047372.01.T01:CDS
AAACTTCATTCACCGGTTTC+AGG 0.267736 8:-85375126 None:intergenic
CAACAGGAATGTTCAATCTT+TGG 0.280454 8:-85375801 None:intergenic
ACGTTCAATTATTATCTTGT+AGG 0.290046 8:+85375966 MsG0880047372.01.T01:three_prime_UTR
CGGATAATTTATTGTTGATT+GGG 0.340775 8:+85375917 MsG0880047372.01.T01:three_prime_UTR
ACGGATAATTTATTGTTGAT+TGG 0.350472 8:+85375916 MsG0880047372.01.T01:three_prime_UTR
CAAGACTACCCTTCAAATTC+AGG 0.351441 8:+85370759 MsG0880047372.01.T01:CDS
CATCAGTTGACGTGGAAAAT+GGG 0.380294 8:+85375218 MsG0880047372.01.T01:CDS
CTTGTTCTCAACTGCAAAGT+TGG 0.386423 8:-85375762 None:intergenic
TAGATTCCTGCAGTGCTTTG+AGG 0.398509 8:-85375576 None:intergenic
GAGGAAACATGAAGCATTAG+AGG 0.399707 8:+85375165 MsG0880047372.01.T01:CDS
TTCTTCATCTTCAATCCATC+AGG 0.401465 8:-85375538 None:intergenic
AATTCAACATACAAATTTCA+AGG 0.401997 8:-85375305 None:intergenic
CTTTGTTTGCCATCTTTGAC+AGG 0.405588 8:-85374022 None:intergenic
ATCTTCCTAACCCGTGTTCA+CGG 0.407994 8:+85370864 MsG0880047372.01.T01:CDS
AATGACAATAAATAAAAGTC+AGG 0.434020 8:+85370814 MsG0880047372.01.T01:CDS
TCAGAAGACTCGTGCAACTT+TGG 0.435496 8:-85375094 None:intergenic
GCTTCGAAGCATGGAACGCT+CGG 0.436244 8:-85374973 None:intergenic
TCCACTGCATCCTTTGCATC+AGG 0.440074 8:-85375025 None:intergenic
TTTGCCATCTTTGACAGGCT+TGG 0.441946 8:-85374017 None:intergenic
TCTCGAGTTAATTCTAGAAA+AGG 0.443588 8:+85370910 MsG0880047372.01.T01:CDS
CAGGCGCAAAATTATCTGTC+TGG 0.451138 8:-85375006 None:intergenic
ATTGCAAAACAAAGTGTCAA+TGG 0.458514 8:-85370794 None:intergenic
GGAGACGGGTTCTAATGATA+TGG 0.458688 8:+85375045 MsG0880047372.01.T01:CDS
TTGTCTGCGCCTGAATTTGA+AGG 0.460818 8:-85370768 None:intergenic
ATTGACTGTGGACAGATGTT+TGG 0.460865 8:+85372740 MsG0880047372.01.T01:CDS
CAAGAGAGAGGAAAATAAAG+TGG 0.462140 8:+85375263 MsG0880047372.01.T01:CDS
CAGGAAAAGTATGGTCCAAA+AGG 0.462353 8:+85373965 MsG0880047372.01.T01:intron
TGAACAAAATAACCTGAAAC+CGG 0.469254 8:+85375114 MsG0880047372.01.T01:CDS
TACTGGTGGCAGCATCCTGA+TGG 0.473972 8:+85375523 MsG0880047372.01.T01:intron
CTCAACTGCAAAGTTGGAGC+TGG 0.492457 8:-85375756 None:intergenic
GAACAAGTATGTGCGATTAG+TGG 0.494270 8:+85375778 MsG0880047372.01.T01:CDS
GCAAAGGATGCAGTGGAGAC+GGG 0.502647 8:+85375031 MsG0880047372.01.T01:CDS
TGCAAAGGATGCAGTGGAGA+CGG 0.510937 8:+85375030 MsG0880047372.01.T01:CDS
TCCATCCGTGAACACGGGTT+AGG 0.511928 8:-85370869 None:intergenic
CTTCGAAGCATGGAACGCTC+GGG 0.518211 8:-85374972 None:intergenic
GGTCATATGACATCTCCAAC+AGG 0.518542 8:-85375817 None:intergenic
CTGAATTTGAAGGGTAGTCT+TGG 0.521402 8:-85370758 None:intergenic
TCGGAAGAAACTTCATTCAC+CGG 0.522070 8:-85375133 None:intergenic
CTAGTGGTTGCTTCGAAGCA+TGG 0.522690 8:-85374982 None:intergenic
GAGCGAGGCGATTGAGCAGA+AGG 0.538864 8:+85375624 MsG0880047372.01.T01:CDS
TCCTAACCCGTGTTCACGGA+TGG 0.540243 8:+85370868 MsG0880047372.01.T01:CDS
ACACTGTCTAGAACTAGCAT+TGG 0.542344 8:-85376050 None:intergenic
GCTGCCAAGCCTGTCAAAGA+TGG 0.543446 8:+85374013 MsG0880047372.01.T01:CDS
AAATTATCTGTCTGGACTAG+TGG 0.555342 8:-85374998 None:intergenic
GCTAGTCGTTGATATTAATG+TGG 0.556605 8:+85374045 MsG0880047372.01.T01:CDS
CTAGTCGTTGATATTAATGT+GGG 0.562155 8:+85374046 MsG0880047372.01.T01:CDS
GGGTCAATCTTTATCTCGAG+TGG 0.565669 8:+85370835 MsG0880047372.01.T01:CDS
AGTTGTCCTCAAAGCACTGC+AGG 0.573521 8:+85375570 MsG0880047372.01.T01:CDS
AACGTCCTCCGTGGTTCTGT+AGG 0.574054 8:+85374077 MsG0880047372.01.T01:CDS
GAAAATGGGGAAGTATTTCA+GGG 0.576073 8:+85375232 MsG0880047372.01.T01:CDS
ATGCTGAAGGAAAGAAACAC+GGG 0.581891 8:+85374942 MsG0880047372.01.T01:CDS
CAAAGATTGAACATTCCTGT+TGG 0.583351 8:+85375802 MsG0880047372.01.T01:exon
GCACTTCTTCTACATGCTGA+AGG 0.586895 8:+85374929 MsG0880047372.01.T01:CDS
GAGTTGTCCATCCGTGAACA+CGG 0.593361 8:-85370875 None:intergenic
ATCAGTTGACGTGGAAAATG+GGG 0.599482 8:+85375219 MsG0880047372.01.T01:CDS
CACACAGTGTATTACAGAAG+CGG 0.604982 8:+85372784 MsG0880047372.01.T01:CDS
AAGTATGGTCCAAAAGGCCA+AGG 0.606114 8:+85373971 MsG0880047372.01.T01:CDS
AGGAAACATGAAGCATTAGA+GGG 0.613312 8:+85375166 MsG0880047372.01.T01:CDS
GGAAGTATTTCAGGGCGAGA+AGG 0.613916 8:+85375240 MsG0880047372.01.T01:CDS
TGTCTGCGCCTGAATTTGAA+GGG 0.617203 8:-85370767 None:intergenic
AGGGCGAGAAGGCAAGAGAG+AGG 0.620409 8:+85375251 MsG0880047372.01.T01:CDS
ATGACAATAAATAAAAGTCA+GGG 0.621401 8:+85370815 MsG0880047372.01.T01:CDS
GGTCAATCTTTATCTCGAGT+GGG 0.625412 8:+85370836 MsG0880047372.01.T01:CDS
CATGCTGAAGGAAAGAAACA+CGG 0.639025 8:+85374941 MsG0880047372.01.T01:CDS
CTGTCAAAGATGGCAAACAA+AGG 0.639970 8:+85374023 MsG0880047372.01.T01:CDS
AGTTGTCCATCCGTGAACAC+GGG 0.642128 8:-85370874 None:intergenic
TAAATGAGAATACAAACCAA+CGG 0.648163 8:-85376019 None:intergenic
TAGCTTTCGTGCATTGACTG+TGG 0.661020 8:+85372728 MsG0880047372.01.T01:intron
GCCTGATGCAAAGGATGCAG+TGG 0.663160 8:+85375024 MsG0880047372.01.T01:CDS
GAATGACACATCAGTTGACG+TGG 0.669822 8:+85375210 MsG0880047372.01.T01:CDS
AAATGAAAATGAATTGAGCG+AGG 0.672838 8:+85375609 MsG0880047372.01.T01:CDS
CTTCTGTAATACACTGTGTG+TGG 0.673491 8:-85372781 None:intergenic
GCTTAGCTGAACGTCCTCCG+TGG 0.705410 8:+85374068 MsG0880047372.01.T01:CDS
AGTATATACCTACAGAACCA+CGG 0.706642 8:-85374085 None:intergenic
TGCTGAAGGAAAGAAACACG+GGG 0.771538 8:+85374943 MsG0880047372.01.T01:CDS
ATATACCTACAGAACCACGG+AGG 0.855057 8:-85374082 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAACAAATAACAAT+CGG + Chr8:85371813-85371832 MsG0880047372.01.T01:intron 10.0%
!! AATAATATATTAAAATAGGT+TGG - Chr8:85371483-85371502 None:intergenic 10.0%
!! GAGTAATAATATATTAAAAT+AGG - Chr8:85371487-85371506 None:intergenic 10.0%
!! TTTACTAAAATTAATACTAA+AGG - Chr8:85375692-85375711 None:intergenic 10.0%
!!! ATAAACAAAATTTTAAAAAG+CGG - Chr8:85371431-85371450 None:intergenic 10.0%
!!! TGATCATTTATATTATTTTA+AGG + Chr8:85373705-85373724 MsG0880047372.01.T01:intron 10.0%
!!! TTTTATGTAAATGTAAATAT+AGG + Chr8:85374347-85374366 MsG0880047372.01.T01:intron 10.0%
!!! TTTTATTTTTACAAAATCAA+TGG - Chr8:85371801-85371820 None:intergenic 10.0%
!!! TTTTTATTATAAAATAGTCT+CGG - Chr8:85374789-85374808 None:intergenic 10.0%
!!! TTTTTTTTAATTTCTTTGTA+AGG + Chr8:85371096-85371115 MsG0880047372.01.T01:intron 10.0%
!! AATACATTTCTTAGTTTAAT+TGG + Chr8:85374645-85374664 MsG0880047372.01.T01:intron 15.0%
!! AATATAAAAATTCATTATGC+TGG - Chr8:85373833-85373852 None:intergenic 15.0%
!! GTTATAATTCAAATTTGATA+TGG - Chr8:85372205-85372224 None:intergenic 15.0%
!! TGAATAATAAACTATCAATT+TGG + Chr8:85373541-85373560 MsG0880047372.01.T01:intron 15.0%
!! TTATCTATATATGTTATAGT+GGG + Chr8:85375358-85375377 MsG0880047372.01.T01:intron 15.0%
!! TTTATCTATATATGTTATAG+TGG + Chr8:85375357-85375376 MsG0880047372.01.T01:intron 15.0%
!!! ATAATTAATGGACAAAAATA+AGG - Chr8:85372827-85372846 None:intergenic 15.0%
!!! CAATTTGTTTCAAAAAATAA+AGG - Chr8:85374476-85374495 None:intergenic 15.0%
!!! CTAGTAAATATTGTATTTTA+GGG - Chr8:85371244-85371263 None:intergenic 15.0%
!!! CTTTATTTTTTGAAACAAAT+TGG + Chr8:85374474-85374493 MsG0880047372.01.T01:intron 15.0%
!!! TAAACAAAATTTTAAAAAGC+GGG - Chr8:85371430-85371449 None:intergenic 15.0%
!!! TATAAAAAATAAAGTTTTCG+CGG + Chr8:85371641-85371660 MsG0880047372.01.T01:intron 15.0%
!!! TCTAGTAAATATTGTATTTT+AGG - Chr8:85371245-85371264 None:intergenic 15.0%
!!! TGATAGATTGATAATAATTT+AGG - Chr8:85373630-85373649 None:intergenic 15.0%
!! AAAAACAAATATTGGTAAAG+AGG - Chr8:85374815-85374834 None:intergenic 20.0%
!! AATAATAATATACAGTACGT+CGG + Chr8:85372017-85372036 MsG0880047372.01.T01:intron 20.0%
!! AATACAATATTTACTAGACA+TGG + Chr8:85371247-85371266 MsG0880047372.01.T01:intron 20.0%
!! AATGACAATAAATAAAAGTC+AGG + Chr8:85370814-85370833 MsG0880047372.01.T01:CDS 20.0%
!! AATTCAACATACAAATTTCA+AGG - Chr8:85375308-85375327 None:intergenic 20.0%
!! ATGACAATAAATAAAAGTCA+GGG + Chr8:85370815-85370834 MsG0880047372.01.T01:CDS 20.0%
!! ATTCAACCATAAGTTAAAAA+AGG - Chr8:85374393-85374412 None:intergenic 20.0%
!! TAGATATTATTTCACTCTTA+TGG + Chr8:85374839-85374858 MsG0880047372.01.T01:intron 20.0%
!! TCTAATGTAAATATTAGACA+TGG - Chr8:85371778-85371797 None:intergenic 20.0%
!! TCTAGAAGAAAAACAAATAT+TGG - Chr8:85374823-85374842 None:intergenic 20.0%
!! TGTTATATTTCAAAAGTTCA+GGG + Chr8:85373733-85373752 MsG0880047372.01.T01:intron 20.0%
!! TTATCTTAAAGTTATAAGTG+TGG - Chr8:85372227-85372246 None:intergenic 20.0%
!! TTCCTTCAAAAAAAAACAAT+CGG + Chr8:85371842-85371861 MsG0880047372.01.T01:intron 20.0%
!! TTGTCCATTAATTATAGATT+AGG + Chr8:85372832-85372851 MsG0880047372.01.T01:intron 20.0%
!! TTGTTATATTTCAAAAGTTC+AGG + Chr8:85373732-85373751 MsG0880047372.01.T01:intron 20.0%
!! TTTCTGTGTAAATAAACTAT+GGG + Chr8:85373227-85373246 MsG0880047372.01.T01:intron 20.0%
!!! AACAAAAGAGAATATTTTGA+CGG + Chr8:85375991-85376010 MsG0880047372.01.T01:three_prime_UTR 20.0%
!!! AATTTCATTTTCATAGTTCA+GGG - Chr8:85373600-85373619 None:intergenic 20.0%
!!! ATAAAAAATAAAGTTTTCGC+GGG + Chr8:85371642-85371661 MsG0880047372.01.T01:intron 20.0%
!!! GAAATTTGTATGTTGAATTT+TGG + Chr8:85375309-85375328 MsG0880047372.01.T01:intron 20.0%
!!! TAATTTCATTTTCATAGTTC+AGG - Chr8:85373601-85373620 None:intergenic 20.0%
!!! TATCATTTTCTCTCATATTT+TGG + Chr8:85373573-85373592 MsG0880047372.01.T01:intron 20.0%
!!! TTTTCTGTGTAAATAAACTA+TGG + Chr8:85373226-85373245 MsG0880047372.01.T01:intron 20.0%
! AAATGATAGTCCTAAGTTAA+AGG - Chr8:85373389-85373408 None:intergenic 25.0%
! AACAACGGAAAAATTAATCA+TGG - Chr8:85372699-85372718 None:intergenic 25.0%
! ACGGATAATTTATTGTTGAT+TGG + Chr8:85375916-85375935 MsG0880047372.01.T01:three_prime_UTR 25.0%
! ACGTTCAATTATTATCTTGT+AGG + Chr8:85375966-85375985 MsG0880047372.01.T01:three_prime_UTR 25.0%
! AGAGAGAAACATAATTATCA+TGG + Chr8:85374209-85374228 MsG0880047372.01.T01:intron 25.0%
! AGATTAAACGATAAAGGTAA+AGG + Chr8:85372396-85372415 MsG0880047372.01.T01:intron 25.0%
! ATAGAAGAGAGTGATAATTT+AGG - Chr8:85373661-85373680 None:intergenic 25.0%
! ATCAATTAAAAGTCAATGGT+AGG - Chr8:85371168-85371187 None:intergenic 25.0%
! ATGAGAGAAAATGATAGTTT+AGG - Chr8:85373569-85373588 None:intergenic 25.0%
! ATTACAGCAGGAAAATTATA+TGG - Chr8:85375490-85375509 None:intergenic 25.0%
! ATTATTTCACTCTTATGGTT+TGG + Chr8:85374844-85374863 MsG0880047372.01.T01:intron 25.0%
! ATTGGTAGATTAAACGATAA+AGG + Chr8:85372390-85372409 MsG0880047372.01.T01:intron 25.0%
! GAAAAAAGTAAATAAAAGCG+CGG - Chr8:85374701-85374720 None:intergenic 25.0%
! GAATGATATTAGTGTTAATC+AGG + Chr8:85374539-85374558 MsG0880047372.01.T01:intron 25.0%
! GGTGTGTATAAATATAGTTT+GGG - Chr8:85371879-85371898 None:intergenic 25.0%
! TAAATGAGAATACAAACCAA+CGG - Chr8:85376022-85376041 None:intergenic 25.0%
! TAGAAGAGAGTGATAATTTA+GGG - Chr8:85373660-85373679 None:intergenic 25.0%
! TAGAGAGCTAAATTCAAAAT+AGG - Chr8:85373051-85373070 None:intergenic 25.0%
! TCAAATTAGTCATTCCAAAA+AGG + Chr8:85373004-85373023 MsG0880047372.01.T01:intron 25.0%
! TGAACATGAATTGAATAAGA+AGG - Chr8:85372647-85372666 None:intergenic 25.0%
! TGAAGATAATAATGTTTGCA+AGG + Chr8:85370954-85370973 MsG0880047372.01.T01:intron 25.0%
! TGAGAGAAAATGATAGTTTA+GGG - Chr8:85373568-85373587 None:intergenic 25.0%
! TTAAAACTAAGACTATGGTT+TGG + Chr8:85372540-85372559 MsG0880047372.01.T01:intron 25.0%
! TTACAGCAGGAAAATTATAT+GGG - Chr8:85375489-85375508 None:intergenic 25.0%
! TTCTGTGTAAATAAACTATG+GGG + Chr8:85373228-85373247 MsG0880047372.01.T01:intron 25.0%
! TTTAATCTACCAATTTACCA+CGG - Chr8:85372384-85372403 None:intergenic 25.0%
!! ATGTTTCCTCTTTTTCTTTT+CGG - Chr8:85375155-85375174 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - Chr8:85372860-85372879 None:intergenic 25.0%
!! CACATAACGATTAAAGTATT+TGG - Chr8:85372125-85372144 None:intergenic 25.0%
!! CGGATAATTTATTGTTGATT+GGG + Chr8:85375917-85375936 MsG0880047372.01.T01:three_prime_UTR 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG - Chr8:85372859-85372878 None:intergenic 25.0%
!! TTCAAAGTTTCCTTTAACTT+AGG + Chr8:85373376-85373395 MsG0880047372.01.T01:intron 25.0%
!! TTTTACATTAAACGTAAGCA+TGG - Chr8:85374426-85374445 None:intergenic 25.0%
!!! AAACCATAGTCTTAGTTTTA+AGG - Chr8:85372541-85372560 None:intergenic 25.0%
!!! AGAAATTTGGAGTTTTAGTA+CGG + Chr8:85371361-85371380 MsG0880047372.01.T01:intron 25.0%
!!! CTTCTATTTTGAAAGTAGTT+GGG + Chr8:85373674-85373693 MsG0880047372.01.T01:intron 25.0%
!!! TAATCTGCTTATTGTTTTAC+TGG + Chr8:85375506-85375525 MsG0880047372.01.T01:intron 25.0%
!!! TCCTAGAAATTTTTTGTGAA+CGG + Chr8:85375897-85375916 MsG0880047372.01.T01:three_prime_UTR 25.0%
!!! TCTCTAAAATGAGAAAATCA+AGG + Chr8:85373065-85373084 MsG0880047372.01.T01:intron 25.0%
!!! TCTTCTATTTTGAAAGTAGT+TGG + Chr8:85373673-85373692 MsG0880047372.01.T01:intron 25.0%
!!! TGAACCCGTTAAATTTTTTA+CGG - Chr8:85371901-85371920 None:intergenic 25.0%
!!! TTCTATTTTGAAAGTAGTTG+GGG + Chr8:85373675-85373694 MsG0880047372.01.T01:intron 25.0%
!!! TTGAAACAAATTGGTTTTTG+AGG + Chr8:85374483-85374502 MsG0880047372.01.T01:intron 25.0%
!!! TTTACTCAATGCTATTTCTT+TGG + Chr8:85373327-85373346 MsG0880047372.01.T01:intron 25.0%
!!! TTTTAATTGATGCACTATTC+AGG + Chr8:85371177-85371196 MsG0880047372.01.T01:intron 25.0%
AAATGAAAATGAATTGAGCG+AGG + Chr8:85375609-85375628 MsG0880047372.01.T01:CDS 30.0%
AAATTGAGGATGGATATTAG+AGG - Chr8:85373135-85373154 None:intergenic 30.0%
AACTAAAGTTGCGTATTGTT+TGG + Chr8:85371064-85371083 MsG0880047372.01.T01:intron 30.0%
AAGCTACATAGCATAAACAA+CGG - Chr8:85372714-85372733 None:intergenic 30.0%
AAGCTATATGAACATGTCAT+AGG + Chr8:85372925-85372944 MsG0880047372.01.T01:intron 30.0%
AATTAAAAGTCAATGGTAGG+AGG - Chr8:85371165-85371184 None:intergenic 30.0%
ACACCCGTAAAAAATTTAAC+GGG + Chr8:85371894-85371913 MsG0880047372.01.T01:intron 30.0%
ACTAATTTGAGCTTACTTAC+CGG - Chr8:85372994-85373013 None:intergenic 30.0%
AGACAAAAATTAACGACTCT+TGG - Chr8:85375841-85375860 None:intergenic 30.0%
AGGATGTTGAAAAATTAGCT+GGG + Chr8:85374367-85374386 MsG0880047372.01.T01:intron 30.0%
ATAAGTACTTGTAAGACTGT+TGG - Chr8:85372970-85372989 None:intergenic 30.0%
ATTGACTAACAAATTGAGGA+TGG - Chr8:85373145-85373164 None:intergenic 30.0%
CAACCTTAAAACTAAGACTA+TGG + Chr8:85372535-85372554 MsG0880047372.01.T01:intron 30.0%
CACACCCGTAAAAAATTTAA+CGG + Chr8:85371893-85371912 MsG0880047372.01.T01:intron 30.0%
CATGAACCGTAAGAAATAAT+AGG - Chr8:85374293-85374312 None:intergenic 30.0%
CTAGTCGTTGATATTAATGT+GGG + Chr8:85374046-85374065 MsG0880047372.01.T01:CDS 30.0%
CTTATGAAAACAGCTTATTG+TGG - Chr8:85372908-85372927 None:intergenic 30.0%
CTTATGGTTGAATTATGTAG+TGG + Chr8:85374400-85374419 MsG0880047372.01.T01:intron 30.0%
GATAAAGCAGAAAACAAGAA+AGG - Chr8:85375343-85375362 None:intergenic 30.0%
GGGTCCTAATCTATAATTAA+TGG - Chr8:85372839-85372858 None:intergenic 30.0%
GGGTGTGTATAAATATAGTT+TGG - Chr8:85371880-85371899 None:intergenic 30.0%
GTAAATATTAGACATGGCAA+CGG - Chr8:85371772-85371791 None:intergenic 30.0%
GTGCATCAATTAAAAGTCAA+TGG - Chr8:85371172-85371191 None:intergenic 30.0%
TAAATATTAGACATGGCAAC+GGG - Chr8:85371771-85371790 None:intergenic 30.0%
TAAGTACTTGTAAGACTGTT+GGG - Chr8:85372969-85372988 None:intergenic 30.0%
TACAGCAGGAAAATTATATG+GGG - Chr8:85375488-85375507 None:intergenic 30.0%
TAGGATGTTGAAAAATTAGC+TGG + Chr8:85374366-85374385 MsG0880047372.01.T01:intron 30.0%
TATAGTGATATAGAGATAGC+TGG + Chr8:85375407-85375426 MsG0880047372.01.T01:intron 30.0%
TCCGTTCACAAAAAATTTCT+AGG - Chr8:85375901-85375920 None:intergenic 30.0%
TGAACAAAATAACCTGAAAC+CGG + Chr8:85375114-85375133 MsG0880047372.01.T01:CDS 30.0%
TGGACAAAAATAAGGCAAAA+AGG - Chr8:85372819-85372838 None:intergenic 30.0%
TTAATCTACCAATTTACCAC+GGG - Chr8:85372383-85372402 None:intergenic 30.0%
TTATCTGTTTATTCTGAGCA+TGG + Chr8:85375384-85375403 MsG0880047372.01.T01:intron 30.0%
TTCATGATACACAACATTTG+TGG - Chr8:85370983-85371002 None:intergenic 30.0%
TTTCTTCCGAAAAGAAAAAG+AGG + Chr8:85375146-85375165 MsG0880047372.01.T01:CDS 30.0%
! AACCATTGACTAACAAATTG+AGG - Chr8:85373149-85373168 None:intergenic 30.0%
! AGTCCTCCTATTATTTCTTA+CGG + Chr8:85374284-85374303 MsG0880047372.01.T01:intron 30.0%
! ATTGCAAAACAAAGTGTCAA+TGG - Chr8:85370797-85370816 None:intergenic 30.0%
! TCTCGAGTTAATTCTAGAAA+AGG + Chr8:85370910-85370929 MsG0880047372.01.T01:CDS 30.0%
!! AAAATTTTAAAAAGCGGGTG+CGG - Chr8:85371425-85371444 None:intergenic 30.0%
!! AAATTTGGAGTTTTAGTACG+GGG + Chr8:85371363-85371382 MsG0880047372.01.T01:intron 30.0%
!! ATCCTCAATTTGTTAGTCAA+TGG + Chr8:85373144-85373163 MsG0880047372.01.T01:intron 30.0%
!! ATTTCTAGGAGATACTTTTG+AGG - Chr8:85375887-85375906 None:intergenic 30.0%
!! GAAATTTGGAGTTTTAGTAC+GGG + Chr8:85371362-85371381 MsG0880047372.01.T01:intron 30.0%
!! GTGGTTTGAGTTTTGTAAAA+CGG + Chr8:85373280-85373299 MsG0880047372.01.T01:intron 30.0%
!! TCTATTTTGAAAGTAGTTGG+GGG + Chr8:85373676-85373695 MsG0880047372.01.T01:intron 30.0%
!! TGGTTTGAGTTTTGTAAAAC+GGG + Chr8:85373281-85373300 MsG0880047372.01.T01:intron 30.0%
!! TTAAAATAGGTTGGTGCTTA+TGG - Chr8:85371474-85371493 None:intergenic 30.0%
!! TTCGATTTTCAGGAAAAGTA+TGG + Chr8:85373956-85373975 MsG0880047372.01.T01:intron 30.0%
!! TTTCTAGGAGATACTTTTGA+GGG - Chr8:85375886-85375905 None:intergenic 30.0%
!!! GAACCCGTTAAATTTTTTAC+GGG - Chr8:85371900-85371919 None:intergenic 30.0%
AAAATTTATTTCCCCGTGCT+TGG + Chr8:85372280-85372299 MsG0880047372.01.T01:intron 35.0%
AAATATTAGACATGGCAACG+GGG - Chr8:85371770-85371789 None:intergenic 35.0%
AACAATAAGCAGATTACAGC+AGG - Chr8:85375502-85375521 None:intergenic 35.0%
AAGTACTTGTAAGACTGTTG+GGG - Chr8:85372968-85372987 None:intergenic 35.0%
AATCAGGTAAGAGTCTAAAC+AGG + Chr8:85374555-85374574 MsG0880047372.01.T01:intron 35.0%
AATGCCCTAAAGTAGTTAGA+AGG - Chr8:85373456-85373475 None:intergenic 35.0%
AATTTCTTTGTAAGGCGTAC+TGG + Chr8:85371104-85371123 MsG0880047372.01.T01:intron 35.0%
ACACTACAATATGCCGTTAT+TGG - Chr8:85374766-85374785 None:intergenic 35.0%
ACAGAAACACAACTCATAGA+TGG - Chr8:85375661-85375680 None:intergenic 35.0%
ACGGTTCATGCAATCATAAA+GGG + Chr8:85374303-85374322 MsG0880047372.01.T01:intron 35.0%
ACTCACCTTCTAACTACTTT+AGG + Chr8:85373448-85373467 MsG0880047372.01.T01:intron 35.0%
ACTTGAGAAGCTGAATTAAG+GGG - Chr8:85373262-85373281 None:intergenic 35.0%
AGTATATACCTACAGAACCA+CGG - Chr8:85374088-85374107 None:intergenic 35.0%
AGTCTTACAAGTACTTATGC+CGG + Chr8:85372972-85372991 MsG0880047372.01.T01:intron 35.0%
CAAAGATTGAACATTCCTGT+TGG + Chr8:85375802-85375821 MsG0880047372.01.T01:exon 35.0%
CAACAGGAATGTTCAATCTT+TGG - Chr8:85375804-85375823 None:intergenic 35.0%
CAAGAGAGAGGAAAATAAAG+TGG + Chr8:85375263-85375282 MsG0880047372.01.T01:CDS 35.0%
CACTTGAGAAGCTGAATTAA+GGG - Chr8:85373263-85373282 None:intergenic 35.0%
CCTCGTATCATTACAATCAT+GGG + Chr8:85373412-85373431 MsG0880047372.01.T01:intron 35.0%
CTAATACAGTGCAGTCAATT+TGG - Chr8:85373789-85373808 None:intergenic 35.0%
CTCACCTTCTAACTACTTTA+GGG + Chr8:85373449-85373468 MsG0880047372.01.T01:intron 35.0%
CTCGTATCATTACAATCATG+GGG + Chr8:85373413-85373432 MsG0880047372.01.T01:intron 35.0%
GAACCGTAAGAAATAATAGG+AGG - Chr8:85374290-85374309 None:intergenic 35.0%
GCTAGTCGTTGATATTAATG+TGG + Chr8:85374045-85374064 MsG0880047372.01.T01:CDS 35.0%
TAATCTACCAATTTACCACG+GGG - Chr8:85372382-85372401 None:intergenic 35.0%
TACGGTTCATGCAATCATAA+AGG + Chr8:85374302-85374321 MsG0880047372.01.T01:intron 35.0%
TCCTCGTATCATTACAATCA+TGG + Chr8:85373411-85373430 MsG0880047372.01.T01:intron 35.0%
TGAATAAGAAGGAACCTTGT+TGG - Chr8:85372636-85372655 None:intergenic 35.0%
TGGTAAGTGTTTGTGCTATA+AGG - Chr8:85372888-85372907 None:intergenic 35.0%
TGGTTTCAATGTGAAGATTG+TGG + Chr8:85372560-85372579 MsG0880047372.01.T01:intron 35.0%
TTATAGATTAGGACCCTGTT+TGG + Chr8:85372843-85372862 MsG0880047372.01.T01:intron 35.0%
TTCTTCATCTTCAATCCATC+AGG - Chr8:85375541-85375560 None:intergenic 35.0%
! AAAAATAAAGTTTTCGCGGG+TGG + Chr8:85371645-85371664 MsG0880047372.01.T01:intron 35.0%
! AAAATAAAGTTTTCGCGGGT+GGG + Chr8:85371646-85371665 MsG0880047372.01.T01:intron 35.0%
! AAATTATCTGTCTGGACTAG+TGG - Chr8:85375001-85375020 None:intergenic 35.0%
! AGGAAACATGAAGCATTAGA+GGG + Chr8:85375166-85375185 MsG0880047372.01.T01:CDS 35.0%
! CAGCATTCAAAGTTTTTCCT+TGG - Chr8:85373991-85374010 None:intergenic 35.0%
! CTCATTTTGCTTCGATTTTC+AGG + Chr8:85373946-85373965 MsG0880047372.01.T01:intron 35.0%
! TTCAATTTTTACCCCCGATA+TGG + Chr8:85371689-85371708 MsG0880047372.01.T01:intron 35.0%
! TTTTCACCCATATCAACTGT+GGG + Chr8:85372332-85372351 MsG0880047372.01.T01:intron 35.0%
! TTTTTCACCCATATCAACTG+TGG + Chr8:85372331-85372350 MsG0880047372.01.T01:intron 35.0%
!! AAAGTTTTTCCTTGGCCTTT+TGG - Chr8:85373983-85374002 None:intergenic 35.0%
!! AAATTTTAAAAAGCGGGTGC+GGG - Chr8:85371424-85371443 None:intergenic 35.0%
!! AATTTGGAGTTTTAGTACGG+GGG + Chr8:85371364-85371383 MsG0880047372.01.T01:intron 35.0%
!! GAAAATGGGGAAGTATTTCA+GGG + Chr8:85375232-85375251 MsG0880047372.01.T01:CDS 35.0%
!! TCTGCTTATTGTTTTACTGG+TGG + Chr8:85375509-85375528 MsG0880047372.01.T01:intron 35.0%
!!! CGCCGATTGTTTTTTTTTGA+AGG - Chr8:85371847-85371866 None:intergenic 35.0%
!!! TTCTTTGGTTTTCCTCAATG+TGG + Chr8:85373342-85373361 MsG0880047372.01.T01:intron 35.0%
AAATCCGATTTAACCGTGTG+CGG + Chr8:85371325-85371344 MsG0880047372.01.T01:intron 40.0%
AACTATGACTCTCTCCGATT+TGG - Chr8:85373760-85373779 None:intergenic 40.0%
AACTGGCGTTAACCTGATTT+CGG - Chr8:85372469-85372488 None:intergenic 40.0%
AAGGAAACCCTAGAATAGCT+TGG + Chr8:85372415-85372434 MsG0880047372.01.T01:intron 40.0%
ACATCAGTTGACGTGGAAAA+TGG + Chr8:85375217-85375236 MsG0880047372.01.T01:CDS 40.0%
AGCGATTTACTCACTTCTAG+AGG + Chr8:85373188-85373207 MsG0880047372.01.T01:intron 40.0%
AGGTTCAAGTGTAACAACCT+AGG - Chr8:85373031-85373050 None:intergenic 40.0%
ATAAGAAGGAACCTTGTTGG+CGG - Chr8:85372633-85372652 None:intergenic 40.0%
ATCAGTTGACGTGGAAAATG+GGG + Chr8:85375219-85375238 MsG0880047372.01.T01:CDS 40.0%
ATGCTGAAGGAAAGAAACAC+GGG + Chr8:85374942-85374961 MsG0880047372.01.T01:CDS 40.0%
ATTGACTGTGGACAGATGTT+TGG + Chr8:85372740-85372759 MsG0880047372.01.T01:CDS 40.0%
CAAAAGTTCAGGGACCAAAT+CGG + Chr8:85373743-85373762 MsG0880047372.01.T01:intron 40.0%
CAAGACTACCCTTCAAATTC+AGG + Chr8:85370759-85370778 MsG0880047372.01.T01:CDS 40.0%
CACAACTCATAGATGGACAA+TGG - Chr8:85375654-85375673 None:intergenic 40.0%
CACACAGTGTATTACAGAAG+CGG + Chr8:85372784-85372803 MsG0880047372.01.T01:CDS 40.0%
CATCAGTTGACGTGGAAAAT+GGG + Chr8:85375218-85375237 MsG0880047372.01.T01:CDS 40.0%
CATGCTGAAGGAAAGAAACA+CGG + Chr8:85374941-85374960 MsG0880047372.01.T01:CDS 40.0%
CATGGTCTACATATCCTGTT+CGG + Chr8:85374227-85374246 MsG0880047372.01.T01:intron 40.0%
CCACTTGAGAAGCTGAATTA+AGG - Chr8:85373264-85373283 None:intergenic 40.0%
CCCATGATTGTAATGATACG+AGG - Chr8:85373415-85373434 None:intergenic 40.0%
CCTTAATTCAGCTTCTCAAG+TGG + Chr8:85373261-85373280 MsG0880047372.01.T01:intron 40.0%
CGGTTCATGCAATCATAAAG+GGG + Chr8:85374304-85374323 MsG0880047372.01.T01:intron 40.0%
CTGAATTTGAAGGGTAGTCT+TGG - Chr8:85370761-85370780 None:intergenic 40.0%
CTGTCAAAGATGGCAAACAA+AGG + Chr8:85374023-85374042 MsG0880047372.01.T01:CDS 40.0%
CTTCTGTAATACACTGTGTG+TGG - Chr8:85372784-85372803 None:intergenic 40.0%
CTTGAGAAGCTGAATTAAGG+GGG - Chr8:85373261-85373280 None:intergenic 40.0%
CTTGTTCTCAACTGCAAAGT+TGG - Chr8:85375765-85375784 None:intergenic 40.0%
GAACAAGTATGTGCGATTAG+TGG + Chr8:85375778-85375797 MsG0880047372.01.T01:CDS 40.0%
GGCATTCTAGTATCTACTGA+AGG + Chr8:85373470-85373489 MsG0880047372.01.T01:intron 40.0%
GGTCAATCTTTATCTCGAGT+GGG + Chr8:85370836-85370855 MsG0880047372.01.T01:CDS 40.0%
GGTTCAAGTGTAACAACCTA+GGG - Chr8:85373030-85373049 None:intergenic 40.0%
GGTTCATGCAATCATAAAGG+GGG + Chr8:85374305-85374324 MsG0880047372.01.T01:intron 40.0%
TCGGAAGAAACTTCATTCAC+CGG - Chr8:85375136-85375155 None:intergenic 40.0%
TCGGAGAGAGTCATAGTTTA+AGG + Chr8:85373762-85373781 MsG0880047372.01.T01:intron 40.0%
TCTACATATCCTGTTCGGAT+GGG + Chr8:85374232-85374251 MsG0880047372.01.T01:intron 40.0%
TGAGTGTCAACTGCCAATAA+CGG + Chr8:85374750-85374769 MsG0880047372.01.T01:intron 40.0%
TTAAGCCTTCACAAGAGTCA+AGG - Chr8:85372444-85372463 None:intergenic 40.0%
TTGACTGCACTGTATTAGTC+TGG + Chr8:85373791-85373810 MsG0880047372.01.T01:intron 40.0%
TTGAGAAGCTGAATTAAGGG+GGG - Chr8:85373260-85373279 None:intergenic 40.0%
! AAATAAAGTTTTCGCGGGTG+GGG + Chr8:85371647-85371666 MsG0880047372.01.T01:intron 40.0%
! AACGGGTTCATTCACAAACT+AGG + Chr8:85371911-85371930 MsG0880047372.01.T01:intron 40.0%
! ACACTGTCTAGAACTAGCAT+TGG - Chr8:85376053-85376072 None:intergenic 40.0%
! CAGGAAAAGTATGGTCCAAA+AGG + Chr8:85373965-85373984 MsG0880047372.01.T01:intron 40.0%
! CGGATTTTCCCCGTTAAATT+CGG - Chr8:85371312-85371331 None:intergenic 40.0%
! CTTTGTTTGCCATCTTTGAC+AGG - Chr8:85374025-85374044 None:intergenic 40.0%
! GAGATAGCTGGTGACTTTTA+AGG + Chr8:85375419-85375438 MsG0880047372.01.T01:intron 40.0%
! GAGGAAACATGAAGCATTAG+AGG + Chr8:85375165-85375184 MsG0880047372.01.T01:CDS 40.0%
! GATTTTCCCCGTTAAATTCG+GGG - Chr8:85371310-85371329 None:intergenic 40.0%
! GGATTTTCCCCGTTAAATTC+GGG - Chr8:85371311-85371330 None:intergenic 40.0%
! GTTGTTCCCACAGTTGATAT+GGG - Chr8:85372341-85372360 None:intergenic 40.0%
! TAATTTTGCGCCTGATGCAA+AGG + Chr8:85375015-85375034 MsG0880047372.01.T01:CDS 40.0%
! TGTTGTTCCCACAGTTGATA+TGG - Chr8:85372342-85372361 None:intergenic 40.0%
! TTTTACCCCCGATATGGTTT+GGG + Chr8:85371695-85371714 MsG0880047372.01.T01:intron 40.0%
! TTTTTACCCCCGATATGGTT+TGG + Chr8:85371694-85371713 MsG0880047372.01.T01:intron 40.0%
!! AAACTTCATTCACCGGTTTC+AGG - Chr8:85375129-85375148 None:intergenic 40.0%
!! AATTTTAAAAAGCGGGTGCG+GGG - Chr8:85371423-85371442 None:intergenic 40.0%
!! GGAAAATGGGGAAGTATTTC+AGG + Chr8:85375231-85375250 MsG0880047372.01.T01:CDS 40.0%
!!! GCTGGGCCTTTTTTAACTTA+TGG + Chr8:85374384-85374403 MsG0880047372.01.T01:intron 40.0%
!!! TATTTTGACGGAGATTCCGT+TGG + Chr8:85376003-85376022 MsG0880047372.01.T01:three_prime_UTR 40.0%
!!! TGGGCAACTTAGGTTTTTTG+AGG - Chr8:85372592-85372611 None:intergenic 40.0%
AAACGGGTACCTATCTGTTG+TGG + Chr8:85373297-85373316 MsG0880047372.01.T01:intron 45.0%
AACGGGTACCTATCTGTTGT+GGG + Chr8:85373298-85373317 MsG0880047372.01.T01:intron 45.0%
AACTCCATCCCACAACAGAT+AGG - Chr8:85373309-85373328 None:intergenic 45.0%
AAGGCTGCCAAGCTATTCTA+GGG - Chr8:85372425-85372444 None:intergenic 45.0%
AAGTATGGTCCAAAAGGCCA+AGG + Chr8:85373971-85373990 MsG0880047372.01.T01:CDS 45.0%
AAGTCAATGGTAGGAGGATC+TGG - Chr8:85371159-85371178 None:intergenic 45.0%
AATCCGATTTAACCGTGTGC+GGG + Chr8:85371326-85371345 MsG0880047372.01.T01:intron 45.0%
ACAAGATCCTAGCCACATTG+AGG - Chr8:85373357-85373376 None:intergenic 45.0%
ACTGGCGTTAACCTGATTTC+GGG - Chr8:85372468-85372487 None:intergenic 45.0%
AGTCATTCCAAAAAGGCCCT+AGG + Chr8:85373011-85373030 MsG0880047372.01.T01:intron 45.0%
ATATACCTACAGAACCACGG+AGG - Chr8:85374085-85374104 None:intergenic 45.0%
ATCCTGTTCGGATGGGAATT+GGG + Chr8:85374239-85374258 MsG0880047372.01.T01:intron 45.0%
ATCTTCCTAACCCGTGTTCA+CGG + Chr8:85370864-85370883 MsG0880047372.01.T01:CDS 45.0%
CAGGCGCAAAATTATCTGTC+TGG - Chr8:85375009-85375028 None:intergenic 45.0%
GAAGGCTTAAACCCGAAATC+AGG + Chr8:85372454-85372473 MsG0880047372.01.T01:intron 45.0%
GAATGACACATCAGTTGACG+TGG + Chr8:85375210-85375229 MsG0880047372.01.T01:CDS 45.0%
GCAAGTCTCTTGTGGATCAA+AGG + Chr8:85374588-85374607 MsG0880047372.01.T01:intron 45.0%
GCACTTCTTCTACATGCTGA+AGG + Chr8:85374929-85374948 MsG0880047372.01.T01:CDS 45.0%
GGGTCAATCTTTATCTCGAG+TGG + Chr8:85370835-85370854 MsG0880047372.01.T01:CDS 45.0%
GGTCATATGACATCTCCAAC+AGG - Chr8:85375820-85375839 None:intergenic 45.0%
GTCTACATATCCTGTTCGGA+TGG + Chr8:85374231-85374250 MsG0880047372.01.T01:intron 45.0%
TAGATTCCTGCAGTGCTTTG+AGG - Chr8:85375579-85375598 None:intergenic 45.0%
TATCCTGTTCGGATGGGAAT+TGG + Chr8:85374238-85374257 MsG0880047372.01.T01:intron 45.0%
TCAGAAGACTCGTGCAACTT+TGG - Chr8:85375097-85375116 None:intergenic 45.0%
TGCTGAAGGAAAGAAACACG+GGG + Chr8:85374943-85374962 MsG0880047372.01.T01:CDS 45.0%
TGTCTGCGCCTGAATTTGAA+GGG - Chr8:85370770-85370789 None:intergenic 45.0%
TTCTTCTCCCCGTGGTAAAT+TGG + Chr8:85372372-85372391 MsG0880047372.01.T01:intron 45.0%
TTGATCCACAAGAGACTTGC+AGG - Chr8:85374588-85374607 None:intergenic 45.0%
TTGTCTGCGCCTGAATTTGA+AGG - Chr8:85370771-85370790 None:intergenic 45.0%
TTTACCCCCGATATGGTTTG+GGG + Chr8:85371696-85371715 MsG0880047372.01.T01:intron 45.0%
TTTCATGTTTCTTCTCCCCG+TGG + Chr8:85372364-85372383 MsG0880047372.01.T01:intron 45.0%
TTTGCCATCTTTGACAGGCT+TGG - Chr8:85374020-85374039 None:intergenic 45.0%
! AATAAAGTTTTCGCGGGTGG+GGG + Chr8:85371648-85371667 MsG0880047372.01.T01:intron 45.0%
! AGGTTTGAAGCTGCTCATCT+TGG + Chr8:85370930-85370949 MsG0880047372.01.T01:intron 45.0%
! ATTAGCCTGCAAGTCTCTTG+TGG + Chr8:85374580-85374599 MsG0880047372.01.T01:intron 45.0%
! GGAGACGGGTTCTAATGATA+TGG + Chr8:85375045-85375064 MsG0880047372.01.T01:CDS 45.0%
! GTAACAACCTAGGGCCTTTT+TGG - Chr8:85373021-85373040 None:intergenic 45.0%
! TACTCACTTCTAGAGGAGTC+TGG + Chr8:85373195-85373214 MsG0880047372.01.T01:intron 45.0%
! TGGTTTTCCTCAATGTGGCT+AGG + Chr8:85373347-85373366 MsG0880047372.01.T01:intron 45.0%
!! TAGCTTTCGTGCATTGACTG+TGG + Chr8:85372728-85372747 MsG0880047372.01.T01:intron 45.0%
AGTTGTCCATCCGTGAACAC+GGG - Chr8:85370877-85370896 None:intergenic 50.0%
CAAGGCTGCCAAGCTATTCT+AGG - Chr8:85372426-85372445 None:intergenic 50.0%
CAGTGAAGCAGAACGAACGA+TGG - Chr8:85372503-85372522 None:intergenic 50.0%
CATGCAATCATAAAGGGGGC+AGG + Chr8:85374309-85374328 MsG0880047372.01.T01:intron 50.0%
CGGAAGTGATTGGGCAACTT+AGG - Chr8:85372602-85372621 None:intergenic 50.0%
CTAGTGGTTGCTTCGAAGCA+TGG - Chr8:85374985-85375004 None:intergenic 50.0%
CTCAACTGCAAAGTTGGAGC+TGG - Chr8:85375759-85375778 None:intergenic 50.0%
CTCCAAATTTCTCCCACACC+CGG - Chr8:85371353-85371372 None:intergenic 50.0%
GAGCACGATCGGAAGTGATT+GGG - Chr8:85372611-85372630 None:intergenic 50.0%
GAGTTGTCCATCCGTGAACA+CGG - Chr8:85370878-85370897 None:intergenic 50.0%
GGTACCTATCTGTTGTGGGA+TGG + Chr8:85373302-85373321 MsG0880047372.01.T01:intron 50.0%
TATTAGACATGGCAACGGGG+TGG - Chr8:85371767-85371786 None:intergenic 50.0%
TCCACTGCATCCTTTGCATC+AGG - Chr8:85375028-85375047 None:intergenic 50.0%
TGCAAAGGATGCAGTGGAGA+CGG + Chr8:85375030-85375049 MsG0880047372.01.T01:CDS 50.0%
TTATTTCCCCGTGCTTGGCA+CGG + Chr8:85372285-85372304 MsG0880047372.01.T01:intron 50.0%
TTCCCCGTTAAATTCGGGGA+GGG - Chr8:85371306-85371325 None:intergenic 50.0%
TTTCCCCGTTAAATTCGGGG+AGG - Chr8:85371307-85371326 None:intergenic 50.0%
!! AGTTGTCCTCAAAGCACTGC+AGG + Chr8:85375570-85375589 MsG0880047372.01.T01:CDS 50.0%
!! CGATGGCTCTGTTTTGCAAC+TGG - Chr8:85372486-85372505 None:intergenic 50.0%
!! GGAAGTATTTCAGGGCGAGA+AGG + Chr8:85375240-85375259 MsG0880047372.01.T01:CDS 50.0%
!! TTGGAGTTTTAGTACGGGGG+CGG + Chr8:85371367-85371386 MsG0880047372.01.T01:intron 50.0%
AGCCCAATTCCCATCCGAAC+AGG - Chr8:85374244-85374263 None:intergenic 55.0%
ATAGTGACCCGTGCCAAGCA+CGG - Chr8:85372296-85372315 None:intergenic 55.0%
ATTTAACCGTGTGCGGGTCC+GGG + Chr8:85371332-85371351 MsG0880047372.01.T01:intron 55.0%
CTTCGAAGCATGGAACGCTC+GGG - Chr8:85374975-85374994 None:intergenic 55.0%
GATTTAACCGTGTGCGGGTC+CGG + Chr8:85371331-85371350 MsG0880047372.01.T01:intron 55.0%
GCAAAGGATGCAGTGGAGAC+GGG + Chr8:85375031-85375050 MsG0880047372.01.T01:CDS 55.0%
GCCTGATGCAAAGGATGCAG+TGG + Chr8:85375024-85375043 MsG0880047372.01.T01:CDS 55.0%
GCTGCCAAGCCTGTCAAAGA+TGG + Chr8:85374013-85374032 MsG0880047372.01.T01:CDS 55.0%
GCTTCGAAGCATGGAACGCT+CGG - Chr8:85374976-85374995 None:intergenic 55.0%
GGACCCGCACACGGTTAAAT+CGG - Chr8:85371332-85371351 None:intergenic 55.0%
GGAGCACGATCGGAAGTGAT+TGG - Chr8:85372612-85372631 None:intergenic 55.0%
GGCAGCCTTGACTCTTGTGA+AGG + Chr8:85372436-85372455 MsG0880047372.01.T01:intron 55.0%
GTCCGGGTGTGGGAGAAATT+TGG + Chr8:85371348-85371367 MsG0880047372.01.T01:intron 55.0%
TACTGGTGGCAGCATCCTGA+TGG + Chr8:85375523-85375542 MsG0880047372.01.T01:intron 55.0%
TATTTCCCCGTGCTTGGCAC+GGG + Chr8:85372286-85372305 MsG0880047372.01.T01:intron 55.0%
TCCATCCGTGAACACGGGTT+AGG - Chr8:85370872-85370891 None:intergenic 55.0%
TCCCCGTTAAATTCGGGGAG+GGG - Chr8:85371305-85371324 None:intergenic 55.0%
TCCTAACCCGTGTTCACGGA+TGG + Chr8:85370868-85370887 MsG0880047372.01.T01:CDS 55.0%
TTTAAAAAGCGGGTGCGGGG+CGG - Chr8:85371420-85371439 None:intergenic 55.0%
! AACGTCCTCCGTGGTTCTGT+AGG + Chr8:85374077-85374096 MsG0880047372.01.T01:CDS 55.0%
!! TGGAGTTTTAGTACGGGGGC+GGG + Chr8:85371368-85371387 MsG0880047372.01.T01:intron 55.0%
AGGGCGAGAAGGCAAGAGAG+AGG + Chr8:85375251-85375270 MsG0880047372.01.T01:CDS 60.0%
CCCCCGTCCCCAAACCATAT+CGG - Chr8:85371706-85371725 None:intergenic 60.0%
CCCCCTCCCCGAATTTAACG+GGG + Chr8:85371301-85371320 MsG0880047372.01.T01:intron 60.0%
CCCCGTCCCCAAACCATATC+GGG - Chr8:85371705-85371724 None:intergenic 60.0%
CCCCGTTAAATTCGGGGAGG+GGG - Chr8:85371304-85371323 None:intergenic 60.0%
CCCGTCCCCAAACCATATCG+GGG - Chr8:85371704-85371723 None:intergenic 60.0%
CCGTCCCCAAACCATATCGG+GGG - Chr8:85371703-85371722 None:intergenic 60.0%
CCTTGTTGGCGGAGCACGAT+CGG - Chr8:85372622-85372641 None:intergenic 60.0%
CGCCCCCTCCCCGAATTTAA+CGG + Chr8:85371299-85371318 MsG0880047372.01.T01:intron 60.0%
CGTTAAATTCGGGGAGGGGG+CGG - Chr8:85371301-85371320 None:intergenic 60.0%
GACATGGCAACGGGGTGGAT+CGG - Chr8:85371762-85371781 None:intergenic 60.0%
GAGCGAGGCGATTGAGCAGA+AGG + Chr8:85375624-85375643 MsG0880047372.01.T01:CDS 60.0%
GCCCCCTCCCCGAATTTAAC+GGG + Chr8:85371300-85371319 MsG0880047372.01.T01:intron 60.0%
GCTTAGCTGAACGTCCTCCG+TGG + Chr8:85374068-85374087 MsG0880047372.01.T01:CDS 60.0%
TAGTGACCCGTGCCAAGCAC+GGG - Chr8:85372295-85372314 None:intergenic 60.0%
TTAAAAAGCGGGTGCGGGGC+GGG - Chr8:85371419-85371438 None:intergenic 60.0%
! AAAGTTTTCGCGGGTGGGGG+TGG + Chr8:85371651-85371670 MsG0880047372.01.T01:intron 60.0%
! AAGTTTTCGCGGGTGGGGGT+GGG + Chr8:85371652-85371671 MsG0880047372.01.T01:intron 60.0%
! ATATGGTTTGGGGACGGGGG+CGG + Chr8:85371706-85371725 MsG0880047372.01.T01:intron 60.0%
! CCCCCGATATGGTTTGGGGA+CGG + Chr8:85371700-85371719 MsG0880047372.01.T01:intron 60.0%
! CCCCGATATGGTTTGGGGAC+GGG + Chr8:85371701-85371720 MsG0880047372.01.T01:intron 60.0%
! CCCGATATGGTTTGGGGACG+GGG + Chr8:85371702-85371721 MsG0880047372.01.T01:intron 60.0%
! CCGATATGGTTTGGGGACGG+GGG + Chr8:85371703-85371722 MsG0880047372.01.T01:intron 60.0%
!! GGAGTTTTAGTACGGGGGCG+GGG + Chr8:85371369-85371388 MsG0880047372.01.T01:intron 60.0%
AGTGACCCGTGCCAAGCACG+GGG - Chr8:85372294-85372313 None:intergenic 65.0%
ATGGCAACGGGGTGGATCGG+AGG - Chr8:85371759-85371778 None:intergenic 65.0%
CCGATCGTGCTCCGCCAACA+AGG + Chr8:85372619-85372638 MsG0880047372.01.T01:intron 65.0%
GTGTAAGCATCCCCCGCACC+CGG - Chr8:85371395-85371414 None:intergenic 65.0%
TAAAAAGCGGGTGCGGGGCG+GGG - Chr8:85371418-85371437 None:intergenic 65.0%
! AGTTTTCGCGGGTGGGGGTG+GGG + Chr8:85371653-85371672 MsG0880047372.01.T01:intron 65.0%
! TATGGTTTGGGGACGGGGGC+GGG + Chr8:85371707-85371726 MsG0880047372.01.T01:intron 65.0%
! TTTTAGTACGGGGGCGGGGC+CGG + Chr8:85371373-85371392 MsG0880047372.01.T01:intron 65.0%
AAAAAGCGGGTGCGGGGCGG+GGG - Chr8:85371417-85371436 None:intergenic 70.0%
CAACGGGGTGGATCGGAGGC+GGG - Chr8:85371755-85371774 None:intergenic 70.0%
GCAACGGGGTGGATCGGAGG+CGG - Chr8:85371756-85371775 None:intergenic 70.0%
TTTAGTACGGGGGCGGGGCC+GGG + Chr8:85371374-85371393 MsG0880047372.01.T01:intron 70.0%
! ATGGTTTGGGGACGGGGGCG+GGG + Chr8:85371708-85371727 MsG0880047372.01.T01:intron 70.0%
! GTTTTCGCGGGTGGGGGTGG+GGG + Chr8:85371654-85371673 MsG0880047372.01.T01:intron 70.0%
AACCCCGCCCCCGCCAGACT+CGG + Chr8:85371275-85371294 MsG0880047372.01.T01:intron 75.0%
ACCGTGTGCGGGTCCGGGTG+TGG + Chr8:85371337-85371356 MsG0880047372.01.T01:intron 75.0%
CCCACACCCGGACCCGCACA+CGG - Chr8:85371341-85371360 None:intergenic 75.0%
CCGTGTGCGGGTCCGGGTGT+GGG + Chr8:85371338-85371357 MsG0880047372.01.T01:intron 75.0%
! TGGTTTGGGGACGGGGGCGG+GGG + Chr8:85371709-85371728 MsG0880047372.01.T01:intron 75.0%
! ACGGGGGCGGGGGCAGGAAC+GGG + Chr8:85371719-85371738 MsG0880047372.01.T01:intron 80.0%
! AGGGGGCGGCCGAGTCTGGC+GGG - Chr8:85371287-85371306 None:intergenic 80.0%
! GACGGGGGCGGGGGCAGGAA+CGG + Chr8:85371718-85371737 MsG0880047372.01.T01:intron 80.0%
! GAGGGGGCGGCCGAGTCTGG+CGG - Chr8:85371288-85371307 None:intergenic 80.0%
! GTGGGGGTGGGGGCGGGGTT+GGG + Chr8:85371664-85371683 MsG0880047372.01.T01:intron 80.0%
! TTCGCGGGTGGGGGTGGGGG+CGG + Chr8:85371657-85371676 MsG0880047372.01.T01:intron 80.0%
! CGGCCGAGTCTGGCGGGGGC+GGG - Chr8:85371281-85371300 None:intergenic 85.0%
! CGGGGGCGGGGGCAGGAACG+GGG + Chr8:85371720-85371739 MsG0880047372.01.T01:intron 85.0%
! GCGGCCGAGTCTGGCGGGGG+CGG - Chr8:85371282-85371301 None:intergenic 85.0%
! GGCCGAGTCTGGCGGGGGCG+GGG - Chr8:85371280-85371299 None:intergenic 85.0%
! GGGGAGGGGGCGGCCGAGTC+TGG - Chr8:85371291-85371310 None:intergenic 85.0%
! GGGGCGGCCGAGTCTGGCGG+GGG - Chr8:85371285-85371304 None:intergenic 85.0%
! GGGGGCGGCCGAGTCTGGCG+GGG - Chr8:85371286-85371305 None:intergenic 85.0%
! GGTGGGGGTGGGGGCGGGGT+TGG + Chr8:85371663-85371682 MsG0880047372.01.T01:intron 85.0%
! TACGGGGGCGGGGCCGGGTG+CGG + Chr8:85371379-85371398 MsG0880047372.01.T01:intron 85.0%
! TCGCGGGTGGGGGTGGGGGC+GGG + Chr8:85371658-85371677 MsG0880047372.01.T01:intron 85.0%
! TTGGGGACGGGGGCGGGGGC+AGG + Chr8:85371713-85371732 MsG0880047372.01.T01:intron 85.0%
! ACGGGGGCGGGGCCGGGTGC+GGG + Chr8:85371380-85371399 MsG0880047372.01.T01:intron 90.0%
! CGCGGGTGGGGGTGGGGGCG+GGG + Chr8:85371659-85371678 MsG0880047372.01.T01:intron 90.0%
! CGGGGGCGGGGCCGGGTGCG+GGG + Chr8:85371381-85371400 MsG0880047372.01.T01:intron 95.0%
! GGGGGCGGGGCCGGGTGCGG+GGG + Chr8:85371382-85371401 MsG0880047372.01.T01:intron 95.0%
Chromosome Type Strat End Strand Name
Chr8 gene 85370737 85376082 85370737 ID=MsG0880047372.01;Name=MsG0880047372.01
Chr8 mRNA 85370737 85376082 85370737 ID=MsG0880047372.01.T01;Parent=MsG0880047372.01;Name=MsG0880047372.01.T01;_AED=0.36;_eAED=0.36;_QI=0|0.8|0.83|1|1|1|6|271|330
Chr8 exon 85370737 85370931 85370737 ID=MsG0880047372.01.T01:exon:17701;Parent=MsG0880047372.01.T01
Chr8 exon 85372731 85372805 85372731 ID=MsG0880047372.01.T01:exon:17702;Parent=MsG0880047372.01.T01
Chr8 exon 85373968 85374098 85373968 ID=MsG0880047372.01.T01:exon:17703;Parent=MsG0880047372.01.T01
Chr8 exon 85374898 85375315 85374898 ID=MsG0880047372.01.T01:exon:17704;Parent=MsG0880047372.01.T01
Chr8 exon 85375535 85375645 85375535 ID=MsG0880047372.01.T01:exon:17705;Parent=MsG0880047372.01.T01
Chr8 exon 85375749 85376082 85375749 ID=MsG0880047372.01.T01:exon:17706;Parent=MsG0880047372.01.T01
Chr8 CDS 85370737 85370931 85370737 ID=MsG0880047372.01.T01:cds;Parent=MsG0880047372.01.T01
Chr8 CDS 85372731 85372805 85372731 ID=MsG0880047372.01.T01:cds;Parent=MsG0880047372.01.T01
Chr8 CDS 85373968 85374098 85373968 ID=MsG0880047372.01.T01:cds;Parent=MsG0880047372.01.T01
Chr8 CDS 85374898 85375315 85374898 ID=MsG0880047372.01.T01:cds;Parent=MsG0880047372.01.T01
Chr8 CDS 85375535 85375645 85375535 ID=MsG0880047372.01.T01:cds;Parent=MsG0880047372.01.T01
Chr8 CDS 85375749 85375811 85375749 ID=MsG0880047372.01.T01:cds;Parent=MsG0880047372.01.T01
Chr8 three_prime_UTR 85375812 85376082 85375812 ID=MsG0880047372.01.T01:three_prime_utr;Parent=MsG0880047372.01.T01
Gene Sequence

>MsG0880047372.01.T01

ATGAATCTTATTCTGAGTGATCCAAGACTACCCTTCAAATTCAGGCGCAGACAATTTCCATTGACACTTTGTTTTGCAATGACAATAAATAAAAGTCAGGGTCAATCTTTATCTCGAGTGGGAGTTTATCTTCCTAACCCGTGTTCACGGATGGACAACTCTATGTCGTTGTCTCTCGAGTTAATTCTAGAAAAGCTTTCGTGCATTGACTGTGGACAGATGTTTGGTCGAGACACTGTTCAGAACCACACACAGTGTATTACAGAAGCGGAAAAGTATGGTCCAAAAGGCCAAGGAAAAACTTTGAATGCTGCAGCTGCCAAGCCTGTCAAAGATGGCAAACAAAGGCTAGTCGTTGATATTAATGTGGGCTTAGCTGAACGTCCTCCGTGGTTCTGTAGTCTTTGCAATACAAAAGCTACAAGTAAGCAAGCACTTCTTCTACATGCTGAAGGAAAGAAACACGGGGCAAAAGCCCGAGCGTTCCATGCTTCGAAGCAACCACTAGTCCAGACAGATAATTTTGCGCCTGATGCAAAGGATGCAGTGGAGACGGGTTCTAATGATATGGCAAAAGATGACAAAATTTCAGAGCAGCCAAAGTTGCACGAGTCTTCTGAACAAAATAACCTGAAACCGGTGAATGAAGTTTCTTCCGAAAAGAAAAAGAGGAAACATGAAGCATTAGAGGGTGACGTTATTAAAAAAAACAAGAATGACACATCAGTTGACGTGGAAAATGGGGAAGTATTTCAGGGCGAGAAGGCAAGAGAGAGGAAAATAAAGTGGAAGAAGTTTATCAAAGCAGCCTTGAAATTTCATCCTGATGGATTGAAGATGAAGAAATTGAGAAAAGTTGTCCTCAAAGCACTGCAGGAATCTAGCATTGTAGTAAATGAAAATGAATTGAGCGAGGCGATTGAGCAGAAGATAAACTCCAGCTCCAACTTTGCAGTTGAGAACAAGTATGTGCGATTAGTGGCCAAAGATTGA
Protein sequence

>MsG0880047372.01.T01

MNLILSDPRLPFKFRRRQFPLTLCFAMTINKSQGQSLSRVGVYLPNPCSRMDNSMSLSLELILEKLSCIDCGQMFGRDTVQNHTQCITEAEKYGPKGQGKTLNAAAAKPVKDGKQRLVVDINVGLAERPPWFCSLCNTKATSKQALLLHAEGKKHGAKARAFHASKQPLVQTDNFAPDAKDAVETGSNDMAKDDKISEQPKLHESSEQNNLKPVNEVSSEKKKRKHEALEGDVIKKNKNDTSVDVENGEVFQGEKARERKIKWKKFIKAALKFHPDGLKMKKLRKVVLKALQESSIVVNENELSEAIEQKINSSSNFAVENKYVRLVAKD*