AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047469.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047469.01.T01 MTR_4g128090 89.869 306 25 3 1 305 1 301 0.0 554
MsG0880047469.01.T01 MTR_4g091060 37.719 228 135 4 75 302 5 225 4.38e-42 146
MsG0880047469.01.T01 MTR_4g091060 37.719 228 135 4 75 302 5 225 8.36e-41 146
MsG0880047469.01.T01 MTR_2g091220 37.118 229 129 7 78 302 11 228 2.67e-34 125
MsG0880047469.01.T01 MTR_2g091220 37.118 229 129 7 78 302 11 228 3.17e-34 125
MsG0880047469.01.T01 MTR_2g091220 37.555 229 128 8 78 302 11 228 6.67e-33 124
MsG0880047469.01.T01 MTR_4g091060 40.123 162 92 3 141 302 10 166 9.56e-29 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047469.01.T01 AT5G57440 75.732 239 57 1 66 303 1 239 4.52e-135 382
MsG0880047469.01.T01 AT4G25840 69.057 265 73 1 50 305 34 298 5.93e-133 379
MsG0880047469.01.T01 AT4G21470 35.345 232 143 4 71 302 4 228 1.42e-38 140

Find 81 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGATGCATCATGTTGTTCT+TGG 0.193950 8:-86834360 MsG0880047469.01.T01:CDS
TAATTATTCATCCAACTAAT+TGG 0.204300 8:+86832257 None:intergenic
CTAACGACGGTGAGAAATTT+TGG 0.236357 8:-86837618 MsG0880047469.01.T01:CDS
CTTCTCTTTCAACAAGAAAT+TGG 0.261291 8:+86837076 None:intergenic
TTACCTCCGTTTGAAGATAA+TGG 0.266049 8:-86832359 MsG0880047469.01.T01:CDS
GTTCCAATTGCCGTGGCAAC+TGG 0.292460 8:-86834572 MsG0880047469.01.T01:CDS
TGTGCATGAGTTGCATAAAT+AGG 0.317350 8:+86832071 None:intergenic
TACCCAGTTGCCACGGCAAT+TGG 0.323593 8:+86834569 None:intergenic
ATAGTGTATGAAATCCAAAA+TGG 0.324843 8:+86832122 None:intergenic
GGTTTGCCTTGTTTAACTTC+AGG 0.330793 8:+86834330 None:intergenic
AAACGGACCCCAAATTAAAA+AGG 0.344406 8:-86837568 MsG0880047469.01.T01:CDS
GTGTTGTAGGTCTGTTGTTA+TGG 0.365140 8:-86832471 MsG0880047469.01.T01:intron
GTTTGCCTTGTTTAACTTCA+GGG 0.369613 8:+86834331 None:intergenic
TAACTAGAACTCCATGGAAA+TGG 0.400533 8:+86832232 None:intergenic
CCATCTTCTCTCCAATTAGT+TGG 0.403629 8:-86832268 MsG0880047469.01.T01:three_prime_UTR
GTTGCATAATTTATTACCAT+TGG 0.404421 8:+86832041 None:intergenic
TCCGTTTAGTTTGCAACCCA+CGG 0.405786 8:+86837584 None:intergenic
ATACTTACTACACTCAATAT+CGG 0.411702 8:-86832188 MsG0880047469.01.T01:three_prime_UTR
TGAAAAGATTTGTCCAGCCT+TGG 0.420947 8:+86832440 None:intergenic
CCTGGCATGAGCTCGCTTGT+TGG 0.428334 8:+86837033 None:intergenic
CCAACACTGGAAAACGGAAA+TGG 0.447316 8:+86837469 None:intergenic
TGCTGCAGCCAGGAGATTTG+AGG 0.448286 8:-86834289 MsG0880047469.01.T01:intron
GCCTCTCAAGGCAAAGATGA+TGG 0.451010 8:-86837169 MsG0880047469.01.T01:CDS
CAATTTCCATTATCTTCAAA+CGG 0.456167 8:+86832353 None:intergenic
CCCGTGGGTTGCAAACTAAA+CGG 0.459897 8:-86837585 MsG0880047469.01.T01:CDS
CTCATCTGAGATCGGAATCA+AGG 0.467475 8:-86837523 MsG0880047469.01.T01:CDS
GATTTGTCCAGCCTTGGATC+AGG 0.474667 8:+86832446 None:intergenic
TTTCATACACTATTATCAAA+TGG 0.474788 8:-86832112 MsG0880047469.01.T01:three_prime_UTR
CCAACTAATTGGAGAGAAGA+TGG 0.483953 8:+86832268 None:intergenic
CCCATCATCTTTGCCTTGAG+AGG 0.490842 8:+86837168 None:intergenic
ATGTATTTCTTGCTGCAGCC+AGG 0.492722 8:-86834299 MsG0880047469.01.T01:CDS
GACACCGACGGAGGAGGGAT+TGG 0.493233 8:+86837425 None:intergenic
CTCAAGCATCTACATGCAAA+AGG 0.496114 8:-86834596 MsG0880047469.01.T01:CDS
GTTCGTGCAGCTAAGAATGC+TGG 0.496579 8:-86834028 MsG0880047469.01.T01:CDS
CCGTTTAGTTTGCAACCCAC+GGG 0.502450 8:+86837585 None:intergenic
TAGTGTATGAAATCCAAAAT+GGG 0.503179 8:+86832123 None:intergenic
CCAACAATGAGTTCAAAACT+TGG 0.503574 8:+86832405 None:intergenic
CACACACTCTCATCTGAGAT+CGG 0.504522 8:-86837531 MsG0880047469.01.T01:CDS
CCAACAAGCGAGCTCATGCC+AGG 0.507539 8:-86837033 MsG0880047469.01.T01:intron
GTTATTTATATGCTCGTGCT+TGG 0.511253 8:-86832213 MsG0880047469.01.T01:three_prime_UTR
GGAGGTAAACTCCACTCACT+AGG 0.512625 8:+86832374 None:intergenic
TTTATGCACTGGTTATTGAA+AGG 0.514928 8:-86831971 MsG0880047469.01.T01:three_prime_UTR
TTGTTATGGTTCCTGATCCA+AGG 0.516102 8:-86832457 MsG0880047469.01.T01:CDS
GAATAATTAATCCATTTCCA+TGG 0.528425 8:-86832243 MsG0880047469.01.T01:three_prime_UTR
GCTGCAGCAAGAAATACATC+TGG 0.528849 8:+86834303 None:intergenic
TTGCAACCCACGGGCCAAGT+TGG 0.534164 8:+86837594 None:intergenic
AATTGAATGACAAACAGTCT+TGG 0.537908 8:+86832319 None:intergenic
TATATATACCTCAAATCTCC+TGG 0.538748 8:+86834281 None:intergenic
AACTGAAAACGCAAAGACAC+GGG 0.538812 8:-86834395 MsG0880047469.01.T01:CDS
TTCCAATTGCCGTGGCAACT+GGG 0.540048 8:-86834571 MsG0880047469.01.T01:intron
TATGAGCCAACACTGGAAAA+CGG 0.542416 8:+86837463 None:intergenic
TATGGTTCCTGATCCAAGGC+TGG 0.543162 8:-86832453 MsG0880047469.01.T01:CDS
CATTCTACATCATGATAGTG+TGG 0.545025 8:+86832007 None:intergenic
GAAAGCGATTGAAGCTGCTA+AGG 0.553025 8:-86837142 MsG0880047469.01.T01:CDS
GACATGGACGGTCTCTTGCT+AGG 0.555282 8:-86837375 MsG0880047469.01.T01:intron
TTTGGTCCAACTTGGCCCGT+GGG 0.555749 8:-86837600 MsG0880047469.01.T01:CDS
GAACTGAAAACGCAAAGACA+CGG 0.557091 8:-86834396 MsG0880047469.01.T01:CDS
TATAAATAACTAGAACTCCA+TGG 0.557285 8:+86832226 None:intergenic
CCTCTCAAGGCAAAGATGAT+GGG 0.558033 8:-86837168 MsG0880047469.01.T01:CDS
TTTCTGACACCGACGGAGGA+GGG 0.569799 8:+86837420 None:intergenic
AAATAGGACACGACGTTGTG+AGG 0.571109 8:+86832087 None:intergenic
TGGATTTCAACCCTAGTGAG+TGG 0.575322 8:-86832385 MsG0880047469.01.T01:CDS
AGAATATTACTCGGATCCAC+TGG 0.577509 8:+86834076 None:intergenic
TCTTTCAACAAGAAATTGGT+CGG 0.578381 8:+86837080 None:intergenic
TGAAATTTACCCAGTTGCCA+CGG 0.584481 8:+86834562 None:intergenic
AACGGAAATGGAACCTGCGT+TGG 0.587374 8:+86837481 None:intergenic
GAGGTAAACTCCACTCACTA+GGG 0.599003 8:+86832375 None:intergenic
ATTCTACATCATGATAGTGT+GGG 0.604918 8:+86832008 None:intergenic
GCAAGAAATACATCTGGTGA+TGG 0.606339 8:+86834309 None:intergenic
TGATCAACAGGGTGGACCAG+TGG 0.613544 8:-86834092 MsG0880047469.01.T01:intron
CTTAGCTGCACGAACTCCAG+AGG 0.618799 8:+86834036 None:intergenic
ATGACCAATCCCTCCTCCGT+CGG 0.624552 8:-86837429 MsG0880047469.01.T01:CDS
TTTCCATTATCTTCAAACGG+AGG 0.628418 8:+86832356 None:intergenic
TTAGCTGCACGAACTCCAGA+GGG 0.640809 8:+86834037 None:intergenic
GCGCTGTTATGAGCCAACAC+TGG 0.652001 8:+86837456 None:intergenic
AAAAGGAGTTCCAATTGCCG+TGG 0.660340 8:-86834579 MsG0880047469.01.T01:CDS
GATGACCCTGAAGTTAAACA+AGG 0.674433 8:-86834336 MsG0880047469.01.T01:CDS
TTGAAAGAGAAGATATGCTG+CGG 0.688166 8:-86837065 MsG0880047469.01.T01:CDS
GCTGTTGTCACAACCAACGC+AGG 0.695668 8:-86837494 MsG0880047469.01.T01:CDS
ACTGAAAACGCAAAGACACG+GGG 0.708609 8:-86834394 MsG0880047469.01.T01:CDS
GATAGTGATGAATCTAACGA+CGG 0.798460 8:-86837631 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAACCAATAAAA+AGG + Chr8:86833273-86833292 None:intergenic 10.0%
!! AAAAAAAAAACCAATAAAAA+GGG + Chr8:86833272-86833291 None:intergenic 10.0%
!!! CATTTTTTTTTTTTTTTACA+TGG - Chr8:86832239-86832258 MsG0880047469.01.T01:three_prime_UTR 10.0%
!!! TTCTTAAACTTTAATATTTT+TGG - Chr8:86833618-86833637 MsG0880047469.01.T01:intron 10.0%
!!! TTTTATTGATTTGTATAAAT+TGG - Chr8:86832772-86832791 MsG0880047469.01.T01:intron 10.0%
!!! TTTTATTGGTTTTTTTTTTT+TGG - Chr8:86833273-86833292 MsG0880047469.01.T01:intron 10.0%
!! AAAACATTTATATGTTTACT+GGG - Chr8:86836083-86836102 MsG0880047469.01.T01:intron 15.0%
!! AATAGTACATGATTAAAAAA+TGG - Chr8:86832680-86832699 MsG0880047469.01.T01:intron 15.0%
!! TGTATATTATTGATATTTAC+CGG - Chr8:86833896-86833915 MsG0880047469.01.T01:intron 15.0%
!! TTGTGAAAAGAATAAAAAAA+GGG + Chr8:86833200-86833219 None:intergenic 15.0%
!! TTTATATGCTATGAATTATT+TGG - Chr8:86836703-86836722 MsG0880047469.01.T01:intron 15.0%
!!! ATAGTTTTCTTACTTTTTAA+TGG - Chr8:86833951-86833970 MsG0880047469.01.T01:intron 15.0%
!!! CTTTTACTTTTTCTTTTTTT+GGG - Chr8:86835057-86835076 MsG0880047469.01.T01:intron 15.0%
!!! GTTTTTTAACTAAACATATA+TGG - Chr8:86835609-86835628 MsG0880047469.01.T01:intron 15.0%
!!! TCTTTTACTTTTTCTTTTTT+TGG - Chr8:86835056-86835075 MsG0880047469.01.T01:intron 15.0%
!! AAAATAAGTTAAAATAGCGT+TGG + Chr8:86836257-86836276 None:intergenic 20.0%
!! AAAATCCAAAAAGAATACAA+AGG + Chr8:86836645-86836664 None:intergenic 20.0%
!! AAATGTAATGAAATTGATCA+AGG + Chr8:86837007-86837026 None:intergenic 20.0%
!! AATATAAGCAACATTTATAG+TGG + Chr8:86834254-86834273 None:intergenic 20.0%
!! ATAAATATTGAACTTTACTC+AGG - Chr8:86834276-86834295 MsG0880047469.01.T01:intron 20.0%
!! ATAGGTAACAAACATTATTA+TGG + Chr8:86836440-86836459 None:intergenic 20.0%
!! ATATATAAGTGTTTATTGAG+AGG + Chr8:86836684-86836703 None:intergenic 20.0%
!! ATCTCAATATGTAACTAATT+GGG - Chr8:86833720-86833739 MsG0880047469.01.T01:intron 20.0%
!! CAAAACATTTATATGTTTAC+TGG - Chr8:86836082-86836101 MsG0880047469.01.T01:intron 20.0%
!! GATAAGTATTTATGCTATAA+GGG - Chr8:86836386-86836405 MsG0880047469.01.T01:intron 20.0%
!! GTTGTGAAAAGAATAAAAAA+AGG + Chr8:86833201-86833220 None:intergenic 20.0%
!! TAAAAGTGAATGTTGATATA+GGG - Chr8:86836140-86836159 MsG0880047469.01.T01:intron 20.0%
!! TAATTATTCATCCAACTAAT+TGG + Chr8:86837319-86837338 None:intergenic 20.0%
!! TAGAATAAGTTTCATTCTTT+CGG + Chr8:86833246-86833265 None:intergenic 20.0%
!! TAGGTAACAAACATTATTAT+GGG + Chr8:86836439-86836458 None:intergenic 20.0%
!! TCAAAAACAAGAATATTACT+CGG + Chr8:86835509-86835528 None:intergenic 20.0%
!! TGATAAGTATTTATGCTATA+AGG - Chr8:86836385-86836404 MsG0880047469.01.T01:intron 20.0%
!! TTTCATACACTATTATCAAA+TGG - Chr8:86837461-86837480 MsG0880047469.01.T01:CDS 20.0%
!!! AAATTTTAACAAATCAGAAG+TGG + Chr8:86833049-86833068 None:intergenic 20.0%
!!! ATTTCTAGTATTTATTGTGA+AGG + Chr8:86833455-86833474 None:intergenic 20.0%
!!! GATACAATAAAACTTTTGAA+TGG - Chr8:86832382-86832401 MsG0880047469.01.T01:CDS 20.0%
!!! TATTCTTTTCACAACTTATA+AGG - Chr8:86833206-86833225 MsG0880047469.01.T01:intron 20.0%
!!! TCTACAATAGTCATTTTTTA+AGG - Chr8:86837425-86837444 MsG0880047469.01.T01:CDS 20.0%
! AAAAAGATGATGTACAATCA+TGG + Chr8:86835702-86835721 None:intergenic 25.0%
! AAATCACCAATATATCTTTC+TGG + Chr8:86835997-86836016 None:intergenic 25.0%
! AAATGAGAATGAACAACTAT+TGG + Chr8:86833020-86833039 None:intergenic 25.0%
! AACAACCTTTGTGTAAAAAT+AGG - Chr8:86833095-86833114 MsG0880047469.01.T01:intron 25.0%
! AAGTTGAAACATGCTAAATA+AGG + Chr8:86833835-86833854 None:intergenic 25.0%
! AATAACCAGTGCATAAAAAA+AGG + Chr8:86837599-86837618 None:intergenic 25.0%
! AATGAACCAGAAAGATATAT+TGG - Chr8:86835988-86836007 MsG0880047469.01.T01:intron 25.0%
! ACAACCTTTGTGTAAAAATA+GGG - Chr8:86833096-86833115 MsG0880047469.01.T01:intron 25.0%
! ACATCAGCATATAAAAAAAG+TGG + Chr8:86834915-86834934 None:intergenic 25.0%
! ACCTATTATAAATGAAAAGC+AGG + Chr8:86834945-86834964 None:intergenic 25.0%
! ATACTTACTACACTCAATAT+CGG - Chr8:86837385-86837404 MsG0880047469.01.T01:CDS 25.0%
! ATAGTGTATGAAATCCAAAA+TGG + Chr8:86837454-86837473 None:intergenic 25.0%
! ATTCGTAATAAACAGCAAAA+AGG + Chr8:86832281-86832300 None:intergenic 25.0%
! CAATTTCCATTATCTTCAAA+CGG + Chr8:86837223-86837242 None:intergenic 25.0%
! CATCTCAATATGTAACTAAT+TGG - Chr8:86833719-86833738 MsG0880047469.01.T01:intron 25.0%
! CTAAAAGTGAATGTTGATAT+AGG - Chr8:86836139-86836158 MsG0880047469.01.T01:intron 25.0%
! GAATAATTAATCCATTTCCA+TGG - Chr8:86837330-86837349 MsG0880047469.01.T01:intron 25.0%
! GTTGCATAATTTATTACCAT+TGG + Chr8:86837535-86837554 None:intergenic 25.0%
! TAAAACTTCTTCCTATGTAT+AGG - Chr8:86834209-86834228 MsG0880047469.01.T01:intron 25.0%
! TAGTGTATGAAATCCAAAAT+GGG + Chr8:86837453-86837472 None:intergenic 25.0%
! TATAAATAACTAGAACTCCA+TGG + Chr8:86837350-86837369 None:intergenic 25.0%
! TTATCCAATAGCTTAATTGA+GGG + Chr8:86833522-86833541 None:intergenic 25.0%
! TTCGTAATAAACAGCAAAAA+GGG + Chr8:86832280-86832299 None:intergenic 25.0%
! TTGTTAAATAGCAGTTATAG+TGG + Chr8:86836889-86836908 None:intergenic 25.0%
! TTTATCCAATAGCTTAATTG+AGG + Chr8:86833523-86833542 None:intergenic 25.0%
!! AAATGTTTTGCAGATGAAAT+CGG + Chr8:86836072-86836091 None:intergenic 25.0%
!! AGAAAGATATATTGGTGATT+TGG - Chr8:86835996-86836015 MsG0880047469.01.T01:intron 25.0%
!! ATAACTGCTATTTAACAACA+CGG - Chr8:86836891-86836910 MsG0880047469.01.T01:intron 25.0%
!! ATATGGTTTTCTGATTCTAT+TGG + Chr8:86835775-86835794 None:intergenic 25.0%
!! ATATGTCTTATTGACTATCA+AGG - Chr8:86832728-86832747 MsG0880047469.01.T01:intron 25.0%
!! ATTAATGACTTTTGTGAACT+TGG - Chr8:86835318-86835337 MsG0880047469.01.T01:intron 25.0%
!! CTTAACCTTTGTATTCTTTT+TGG - Chr8:86836637-86836656 MsG0880047469.01.T01:intron 25.0%
!!! AAAACTGCCTTTTTAATTTG+GGG + Chr8:86832015-86832034 None:intergenic 25.0%
!!! ATAATATACAGAGAAGTACT+AGG + Chr8:86833886-86833905 None:intergenic 25.0%
!!! ATGTTCTGAAATGTTTATGT+TGG - Chr8:86833986-86834005 MsG0880047469.01.T01:intron 25.0%
!!! ATTTTCCTGGTTTGAATTTA+AGG - Chr8:86835372-86835391 MsG0880047469.01.T01:intron 25.0%
!!! ATTTTTTAAGGAACCCATTT+TGG - Chr8:86837437-86837456 MsG0880047469.01.T01:CDS 25.0%
!!! CAACTTCTTTTTGAAGATAT+GGG - Chr8:86834030-86834049 MsG0880047469.01.T01:CDS 25.0%
!!! CCAAACTAGTTTGTTTATTA+GGG - Chr8:86834341-86834360 MsG0880047469.01.T01:CDS 25.0%
!!! GAAAACTGCCTTTTTAATTT+GGG + Chr8:86832016-86832035 None:intergenic 25.0%
!!! GTCATTCAATTTTATTTCAC+TGG - Chr8:86837266-86837285 MsG0880047469.01.T01:intron 25.0%
!!! GTTTTTAGGGTGTTTATTTT+CGG - Chr8:86834742-86834761 MsG0880047469.01.T01:intron 25.0%
!!! TCCAAACTAGTTTGTTTATT+AGG - Chr8:86834340-86834359 MsG0880047469.01.T01:CDS 25.0%
!!! TGAAAACTGCCTTTTTAATT+TGG + Chr8:86832017-86832036 None:intergenic 25.0%
!!! TTTTTAGGGTGTTTATTTTC+GGG - Chr8:86834743-86834762 MsG0880047469.01.T01:intron 25.0%
AAAATATGAATCTCAGAAGC+TGG - Chr8:86836482-86836501 MsG0880047469.01.T01:intron 30.0%
AAATATGAATCTCAGAAGCT+GGG - Chr8:86836483-86836502 MsG0880047469.01.T01:intron 30.0%
AACATTATTATGGGTCTGTT+TGG + Chr8:86836430-86836449 None:intergenic 30.0%
AATTGAATGACAAACAGTCT+TGG + Chr8:86837257-86837276 None:intergenic 30.0%
ACTAGTGTGTGAATGTTATA+TGG + Chr8:86835792-86835811 None:intergenic 30.0%
AGATATGTCTTCATATATGC+CGG + Chr8:86833918-86833937 None:intergenic 30.0%
CCCTAATAAACAAACTAGTT+TGG + Chr8:86834344-86834363 None:intergenic 30.0%
CTTCTCTTTCAACAAGAAAT+TGG + Chr8:86832500-86832519 None:intergenic 30.0%
CTTTGTGTAAAAATAGGGTA+AGG - Chr8:86833101-86833120 MsG0880047469.01.T01:intron 30.0%
GAAATTGAGGATACAAACAA+AGG + Chr8:86834789-86834808 None:intergenic 30.0%
GCTGGTAAATATTATCAACT+GGG + Chr8:86836580-86836599 None:intergenic 30.0%
GTGTATTAATTCCATTTACC+TGG + Chr8:86832561-86832580 None:intergenic 30.0%
TAAATGTGCTTTCTATACCA+CGG + Chr8:86835901-86835920 None:intergenic 30.0%
TAATGAAATTGATCAAGGTG+AGG + Chr8:86837002-86837021 None:intergenic 30.0%
TATATATACCTCAAATCTCC+TGG + Chr8:86835295-86835314 None:intergenic 30.0%
TATCCAATAGCTTAATTGAG+GGG + Chr8:86833521-86833540 None:intergenic 30.0%
TCTTTCAACAAGAAATTGGT+CGG + Chr8:86832496-86832515 None:intergenic 30.0%
TTCATAACATAAACATACCG+TGG - Chr8:86835881-86835900 MsG0880047469.01.T01:intron 30.0%
TTGAATGTAACTACATGTGT+TGG - Chr8:86832613-86832632 MsG0880047469.01.T01:intron 30.0%
TTGTCAAATATCTGTTACAG+TGG + Chr8:86836793-86836812 None:intergenic 30.0%
! ACTTTTAGTATATTCGAGAG+AGG + Chr8:86836127-86836146 None:intergenic 30.0%
! AGAAAGCACATTTAGTAGAA+TGG - Chr8:86835907-86835926 MsG0880047469.01.T01:intron 30.0%
! ATGCAAAACAATTTGAGATG+CGG + Chr8:86834099-86834118 None:intergenic 30.0%
! ATTCTACATCATGATAGTGT+GGG + Chr8:86837568-86837587 None:intergenic 30.0%
! CTTTTAGTATATTCGAGAGA+GGG + Chr8:86836126-86836145 None:intergenic 30.0%
! GAAAGCACATTTAGTAGAAT+GGG - Chr8:86835908-86835927 MsG0880047469.01.T01:intron 30.0%
! GAAGTCTGATTCAATACTTT+TGG - Chr8:86833652-86833671 MsG0880047469.01.T01:intron 30.0%
! GTTTGTTACCTATGTATATG+AGG - Chr8:86836447-86836466 MsG0880047469.01.T01:intron 30.0%
! TATTCTAGCACCCTTTTTAT+TGG - Chr8:86833259-86833278 MsG0880047469.01.T01:intron 30.0%
! TCTAGTCGTATATTTTGTGT+AGG - Chr8:86833426-86833445 MsG0880047469.01.T01:intron 30.0%
! TTTTAACAAATCAGAAGTGG+AGG + Chr8:86833046-86833065 None:intergenic 30.0%
! TTTTTACGCCTCATATACAT+AGG + Chr8:86836458-86836477 None:intergenic 30.0%
!! AAAGAATTTGTTACGAGTAC+AGG + Chr8:86836040-86836059 None:intergenic 30.0%
!! AATGTTTATGTTGGTTTGCT+TGG - Chr8:86833995-86834014 MsG0880047469.01.T01:intron 30.0%
!! ATGTGCGTTTTGTTATATGT+AGG - Chr8:86832937-86832956 MsG0880047469.01.T01:intron 30.0%
!! GATATCGTTTTTACAGTTGT+CGG - Chr8:86834657-86834676 MsG0880047469.01.T01:intron 30.0%
!! GCAACTTCTTTTTGAAGATA+TGG - Chr8:86834029-86834048 MsG0880047469.01.T01:CDS 30.0%
!! GCCTGCTTTTCATTTATAAT+AGG - Chr8:86834941-86834960 MsG0880047469.01.T01:intron 30.0%
!! TTGGTTTGCTTGGTATATAT+TGG - Chr8:86834005-86834024 MsG0880047469.01.T01:intron 30.0%
!! TTTATGCACTGGTTATTGAA+AGG - Chr8:86837602-86837621 MsG0880047469.01.T01:CDS 30.0%
!!! CTTACCCTATTTTTACACAA+AGG + Chr8:86833103-86833122 None:intergenic 30.0%
!!! TTTAGGGGTGTTTTTTCTTT+GGG - Chr8:86834609-86834628 MsG0880047469.01.T01:CDS 30.0%
!!! TTTTAGGGGTGTTTTTTCTT+TGG - Chr8:86834608-86834627 MsG0880047469.01.T01:CDS 30.0%
AAACGGACCCCAAATTAAAA+AGG - Chr8:86832005-86832024 MsG0880047469.01.T01:three_prime_UTR 35.0%
ACCAAAGAGAACCTATACAT+AGG + Chr8:86834223-86834242 None:intergenic 35.0%
ACCCTGTATTACTACATGTT+CGG - Chr8:86835964-86835983 MsG0880047469.01.T01:intron 35.0%
ACCGAACATGTAGTAATACA+GGG + Chr8:86835968-86835987 None:intergenic 35.0%
ACGCTGCATTATGATATTTG+TGG - Chr8:86833766-86833785 MsG0880047469.01.T01:intron 35.0%
ACTTATTTGAGCTTATCCAC+TGG - Chr8:86836176-86836195 MsG0880047469.01.T01:intron 35.0%
AGATGATGTACAATCATGGA+TGG + Chr8:86835698-86835717 None:intergenic 35.0%
AGGAATGAGTGGTAAGAAAT+TGG + Chr8:86836982-86837001 None:intergenic 35.0%
ATAACATAAAGACCGTGGAA+TGG + Chr8:86836518-86836537 None:intergenic 35.0%
ATATTGAGCAGCTAGTATGT+TGG + Chr8:86835858-86835877 None:intergenic 35.0%
ATCCAATAGCTTAATTGAGG+GGG + Chr8:86833520-86833539 None:intergenic 35.0%
ATGTTGATATAGGGTCTGTT+TGG - Chr8:86836149-86836168 MsG0880047469.01.T01:intron 35.0%
CCAACAATGAGTTCAAAACT+TGG + Chr8:86837171-86837190 None:intergenic 35.0%
CGGTCTTTATGTTATTGCAA+TGG - Chr8:86836523-86836542 MsG0880047469.01.T01:intron 35.0%
CGTATACAAATAGCGTATCA+CGG - Chr8:86836816-86836835 MsG0880047469.01.T01:intron 35.0%
GACAAAAAAGTAACACGAGA+TGG + Chr8:86835038-86835057 None:intergenic 35.0%
GATCACAAACTCAACAAAGT+TGG + Chr8:86835427-86835446 None:intergenic 35.0%
GATGATGTACAATCATGGAT+GGG + Chr8:86835697-86835716 None:intergenic 35.0%
GGCTGGTAAATATTATCAAC+TGG + Chr8:86836581-86836600 None:intergenic 35.0%
GGTATTGTAGACTCAAACTT+AGG - Chr8:86834297-86834316 MsG0880047469.01.T01:CDS 35.0%
GTTATTTATATGCTCGTGCT+TGG - Chr8:86837360-86837379 MsG0880047469.01.T01:intron 35.0%
TAACTAGAACTCCATGGAAA+TGG + Chr8:86837344-86837363 None:intergenic 35.0%
TACCGAACATGTAGTAATAC+AGG + Chr8:86835969-86835988 None:intergenic 35.0%
TCAAAAACGACATGTGTGAT+TGG + Chr8:86832180-86832199 None:intergenic 35.0%
TCATATCAGTGCTTATGTCT+AGG + Chr8:86836368-86836387 None:intergenic 35.0%
TCCTATGTATAGGTTCTCTT+TGG - Chr8:86834219-86834238 MsG0880047469.01.T01:intron 35.0%
TGCAGATAAATTGAAAGCTC+TGG - Chr8:86832656-86832675 MsG0880047469.01.T01:intron 35.0%
TGTGCATGAGTTGCATAAAT+AGG + Chr8:86837505-86837524 None:intergenic 35.0%
TTACCTCCGTTTGAAGATAA+TGG - Chr8:86837214-86837233 MsG0880047469.01.T01:CDS 35.0%
TTCAAAAATTCCACGCAGAA+AGG + Chr8:86834065-86834084 None:intergenic 35.0%
TTGAAAGAGAAGATATGCTG+CGG - Chr8:86832508-86832527 MsG0880047469.01.T01:intron 35.0%
TTGCAATAACATAAAGACCG+TGG + Chr8:86836523-86836542 None:intergenic 35.0%
TTTCCATTATCTTCAAACGG+AGG + Chr8:86837220-86837239 None:intergenic 35.0%
! AAGGTTTTTGTTGAAGAGAC+TGG - Chr8:86832450-86832469 MsG0880047469.01.T01:CDS 35.0%
! ACGATACATTGATGATCAAC+AGG - Chr8:86835469-86835488 MsG0880047469.01.T01:intron 35.0%
! AGATCACAAATGCATTTTCC+TGG - Chr8:86835359-86835378 MsG0880047469.01.T01:intron 35.0%
! ATGATCTGCTGTTTGTAATG+GGG - Chr8:86834141-86834160 MsG0880047469.01.T01:intron 35.0%
! CACATACTAAAGTACTTGCA+TGG + Chr8:86834412-86834431 None:intergenic 35.0%
! CATTCTACATCATGATAGTG+TGG + Chr8:86837569-86837588 None:intergenic 35.0%
! CGATACATTGATGATCAACA+GGG - Chr8:86835470-86835489 MsG0880047469.01.T01:intron 35.0%
! CTGTAATTCTTCTTTTGCTC+TGG - Chr8:86833678-86833697 MsG0880047469.01.T01:intron 35.0%
! GATGATCTGCTGTTTGTAAT+GGG - Chr8:86834140-86834159 MsG0880047469.01.T01:intron 35.0%
! TGATGATCTGCTGTTTGTAA+TGG - Chr8:86834139-86834158 MsG0880047469.01.T01:intron 35.0%
! TGCATTTCACTGATTGCATT+TGG + Chr8:86836602-86836621 None:intergenic 35.0%
! TTGTTTGTTACACGTGTTGT+AGG - Chr8:86837089-86837108 MsG0880047469.01.T01:CDS 35.0%
! TTTACACAAAGGTTGTTTCC+AGG + Chr8:86833092-86833111 None:intergenic 35.0%
!! AAGTTTTAATCTTGCGCACT+TGG + Chr8:86834197-86834216 None:intergenic 35.0%
!! AGCTCTAAGGTTTCAATTTG+AGG + Chr8:86833794-86833813 None:intergenic 35.0%
!! AGCTGAATGATCTTTTGGTT+AGG - Chr8:86834536-86834555 MsG0880047469.01.T01:intron 35.0%
!! ATATACAGAGAAGTACTAGG+TGG + Chr8:86833883-86833902 None:intergenic 35.0%
!! CTTATTTTCATAAGCTCTCC+AGG - Chr8:86836269-86836288 MsG0880047469.01.T01:intron 35.0%
!! GTTTGCCTTGTTTAACTTCA+GGG + Chr8:86835245-86835264 None:intergenic 35.0%
!! TCTTTTGGTTAGGAGTTTAG+CGG - Chr8:86834546-86834565 MsG0880047469.01.T01:intron 35.0%
!! TGAGAAATTTTGGTCCAACT+TGG - Chr8:86831965-86831984 MsG0880047469.01.T01:three_prime_UTR 35.0%
!!! ATGTTCATGTTTTCAAGTCC+TGG - Chr8:86833071-86833090 MsG0880047469.01.T01:intron 35.0%
!!! CCAAGTTTTGAACTCATTGT+TGG - Chr8:86837168-86837187 MsG0880047469.01.T01:CDS 35.0%
!!! CTTTTTTTGGTTTCTCTCGA+TGG - Chr8:86834490-86834509 MsG0880047469.01.T01:intron 35.0%
!!! GTTCTCCTTTTTTTATGCAC+TGG - Chr8:86837591-86837610 MsG0880047469.01.T01:CDS 35.0%
!!! GTTTGGTTTTGGGCTTTTTT+TGG - Chr8:86834477-86834496 MsG0880047469.01.T01:intron 35.0%
!!! TTAGGGGTGTTTTTTCTTTG+GGG - Chr8:86834610-86834629 MsG0880047469.01.T01:CDS 35.0%
!!! TTTGGCTCAAGTTTGGTTTT+GGG - Chr8:86834467-86834486 MsG0880047469.01.T01:intron 35.0%
AACACTTAGCGCATAGAAGA+TGG + Chr8:86832843-86832862 None:intergenic 40.0%
AACTGAAAACGCAAAGACAC+GGG - Chr8:86835178-86835197 MsG0880047469.01.T01:intron 40.0%
AAGCACATGCAAGACTGTTT+GGG - Chr8:86836202-86836221 MsG0880047469.01.T01:intron 40.0%
ACAGCTACATAACCGTTTGA+TGG + Chr8:86833375-86833394 None:intergenic 40.0%
ACTACTGATAACCGCAACTA+AGG - Chr8:86835747-86835766 MsG0880047469.01.T01:intron 40.0%
AGAATATTACTCGGATCCAC+TGG + Chr8:86835500-86835519 None:intergenic 40.0%
AGTTGCGGTTATCAGTAGTT+AGG + Chr8:86835746-86835765 None:intergenic 40.0%
CAAATTCCACTACGCTATAG+CGG - Chr8:86836856-86836875 MsG0880047469.01.T01:intron 40.0%
CAAGAAGGAACATGATCGAT+TGG - Chr8:86833322-86833341 MsG0880047469.01.T01:intron 40.0%
CAATCGATCATGTTCCTTCT+TGG + Chr8:86833324-86833343 None:intergenic 40.0%
CATCCATGTTCTCCATCAAA+CGG - Chr8:86833360-86833379 MsG0880047469.01.T01:intron 40.0%
CCAACTAATTGGAGAGAAGA+TGG + Chr8:86837308-86837327 None:intergenic 40.0%
CCATCTTCTCTCCAATTAGT+TGG - Chr8:86837305-86837324 MsG0880047469.01.T01:intron 40.0%
CGTACAATACACCAAATGGT+GGG - Chr8:86833127-86833146 MsG0880047469.01.T01:intron 40.0%
CTCAAGCATCTACATGCAAA+AGG - Chr8:86834977-86834996 MsG0880047469.01.T01:intron 40.0%
CTGATGCATCATGTTGTTCT+TGG - Chr8:86835213-86835232 MsG0880047469.01.T01:intron 40.0%
GAACTGAAAACGCAAAGACA+CGG - Chr8:86835177-86835196 MsG0880047469.01.T01:intron 40.0%
GATGACCCTGAAGTTAAACA+AGG - Chr8:86835237-86835256 MsG0880047469.01.T01:intron 40.0%
GCAAGAAATACATCTGGTGA+TGG + Chr8:86835267-86835286 None:intergenic 40.0%
GCTGTTCTCAAAAACTAACC+TGG + Chr8:86836290-86836309 None:intergenic 40.0%
GCTTCTCACATTGAAAAGAC+AGG - Chr8:86834374-86834393 MsG0880047469.01.T01:CDS 40.0%
GTGCAAGTACTTCAGTTCTT+TGG - Chr8:86834449-86834468 MsG0880047469.01.T01:intron 40.0%
GTGTTGTAGGTCTGTTGTTA+TGG - Chr8:86837102-86837121 MsG0880047469.01.T01:CDS 40.0%
GTGTTGTCAATCACAGATAG+CGG - Chr8:86836731-86836750 MsG0880047469.01.T01:intron 40.0%
GTTGCGTACAATACACCAAA+TGG - Chr8:86833123-86833142 MsG0880047469.01.T01:intron 40.0%
GTTTGTATCCTCAATTTCGC+CGG - Chr8:86834791-86834810 MsG0880047469.01.T01:intron 40.0%
TAAACACCCTAAAAACACCC+TGG + Chr8:86834738-86834757 None:intergenic 40.0%
TAACCGTTTGATGGAGAACA+TGG + Chr8:86833366-86833385 None:intergenic 40.0%
TAAGCACATGCAAGACTGTT+TGG - Chr8:86836201-86836220 MsG0880047469.01.T01:intron 40.0%
TATGAGCCAACACTGGAAAA+CGG + Chr8:86832113-86832132 None:intergenic 40.0%
TCCAATAGCTTAATTGAGGG+GGG + Chr8:86833519-86833538 None:intergenic 40.0%
TGAAAAGATTTGTCCAGCCT+TGG + Chr8:86837136-86837155 None:intergenic 40.0%
TGAAATTTACCCAGTTGCCA+CGG + Chr8:86835014-86835033 None:intergenic 40.0%
TTAACAACACGGTTTGAGCT+AGG - Chr8:86836902-86836921 MsG0880047469.01.T01:intron 40.0%
TTGTTATGGTTCCTGATCCA+AGG - Chr8:86837116-86837135 MsG0880047469.01.T01:CDS 40.0%
! AACTTTTGAATGGCCTCTCA+AGG - Chr8:86832392-86832411 MsG0880047469.01.T01:CDS 40.0%
! CCAAAGTGTTCAACTCAACA+AGG + Chr8:86833565-86833584 None:intergenic 40.0%
! CCTGGTTTGAATTTAAGGCT+GGG - Chr8:86835377-86835396 MsG0880047469.01.T01:intron 40.0%
! CTAACGACGGTGAGAAATTT+TGG - Chr8:86831955-86831974 MsG0880047469.01.T01:three_prime_UTR 40.0%
! CTTTTGCTCTGGTGAAATCT+TGG - Chr8:86833689-86833708 MsG0880047469.01.T01:intron 40.0%
! GTGGAAGCTGAATGATCTTT+TGG - Chr8:86834531-86834550 MsG0880047469.01.T01:intron 40.0%
! TACATTGATGATCAACAGGG+TGG - Chr8:86835473-86835492 MsG0880047469.01.T01:intron 40.0%
! TCAGTTCTTTGGCTCAAGTT+TGG - Chr8:86834460-86834479 MsG0880047469.01.T01:intron 40.0%
! TCATGCACATTTTGCTCCAA+TGG - Chr8:86837516-86837535 MsG0880047469.01.T01:CDS 40.0%
! TCCTGGTTTGAATTTAAGGC+TGG - Chr8:86835376-86835395 MsG0880047469.01.T01:intron 40.0%
! TTAGGAGGTGACGTGTATTT+TGG - Chr8:86834699-86834718 MsG0880047469.01.T01:intron 40.0%
! TTCGTGAAGGAGTCTGTTTT+AGG - Chr8:86834681-86834700 MsG0880047469.01.T01:intron 40.0%
! TTCTATTGGTGCCTTAGTTG+CGG + Chr8:86835761-86835780 None:intergenic 40.0%
! TTTCACTGATTGCATTTGGC+TGG + Chr8:86836598-86836617 None:intergenic 40.0%
! TTTGGTTTCTCTCGATGGAT+CGG - Chr8:86834495-86834514 MsG0880047469.01.T01:intron 40.0%
! TTTTCAGTATGCCTTCTGCA+AGG + Chr8:86832910-86832929 None:intergenic 40.0%
!! ACGGGGGTTTTATCTTTTAG+GGG - Chr8:86834594-86834613 MsG0880047469.01.T01:CDS 40.0%
!! AGAAGATGGACAGCTTTTTC+TGG + Chr8:86837294-86837313 None:intergenic 40.0%
!! AGAATAAAAAAAGGGCACCC+CGG + Chr8:86833192-86833211 None:intergenic 40.0%
!! CCTTGTTGAGTTGAACACTT+TGG - Chr8:86833562-86833581 MsG0880047469.01.T01:intron 40.0%
!! CTTTGGCTCAAGTTTGGTTT+TGG - Chr8:86834466-86834485 MsG0880047469.01.T01:intron 40.0%
!! GACGGGGGTTTTATCTTTTA+GGG - Chr8:86834593-86834612 MsG0880047469.01.T01:CDS 40.0%
!! GGTTTGCCTTGTTTAACTTC+AGG + Chr8:86835246-86835265 None:intergenic 40.0%
!!! CACACATGTCGTTTTTGACA+TGG - Chr8:86832182-86832201 MsG0880047469.01.T01:three_prime_UTR 40.0%
!!! CATGTCGTTTTTGACATGGA+CGG - Chr8:86832186-86832205 MsG0880047469.01.T01:three_prime_UTR 40.0%
!!! TAGGGGTGTTTTTTCTTTGG+GGG - Chr8:86834611-86834630 MsG0880047469.01.T01:CDS 40.0%
AAAAGGAGTTCCAATTGCCG+TGG - Chr8:86834994-86835013 MsG0880047469.01.T01:intron 45.0%
AAATAGGACACGACGTTGTG+AGG + Chr8:86837489-86837508 None:intergenic 45.0%
ACTGAAAACGCAAAGACACG+GGG - Chr8:86835179-86835198 MsG0880047469.01.T01:intron 45.0%
AGATTCCACGCTTTCCAAGA+AGG - Chr8:86833307-86833326 MsG0880047469.01.T01:intron 45.0%
AGCGTATCACGGAACAATAG+CGG - Chr8:86836827-86836846 MsG0880047469.01.T01:intron 45.0%
ATGTATTTCTTGCTGCAGCC+AGG - Chr8:86835274-86835293 MsG0880047469.01.T01:intron 45.0%
ATGTTCCTTCTTGGAAAGCG+TGG + Chr8:86833315-86833334 None:intergenic 45.0%
CAATAGCTTAATTGAGGGGG+GGG + Chr8:86833517-86833536 None:intergenic 45.0%
CATCATAACCGAGTGTTCTG+AGG + Chr8:86836946-86836965 None:intergenic 45.0%
CCAACACTGGAAAACGGAAA+TGG + Chr8:86832107-86832126 None:intergenic 45.0%
CCAATAGCTTAATTGAGGGG+GGG + Chr8:86833518-86833537 None:intergenic 45.0%
CCCAGCCTTAAATTCAAACC+AGG + Chr8:86835380-86835399 None:intergenic 45.0%
CCTCTCAAGGCAAAGATGAT+GGG - Chr8:86832405-86832424 MsG0880047469.01.T01:CDS 45.0%
CTTGCATGTGCTTATACCAG+TGG + Chr8:86836195-86836214 None:intergenic 45.0%
GAAAGCGATTGAAGCTGCTA+AGG - Chr8:86832431-86832450 MsG0880047469.01.T01:CDS 45.0%
GAGGTAAACTCCACTCACTA+GGG + Chr8:86837201-86837220 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - Chr8:86833126-86833145 MsG0880047469.01.T01:intron 45.0%
GCTGCAGCAAGAAATACATC+TGG + Chr8:86835273-86835292 None:intergenic 45.0%
GGGATGTTGAATCCATTCCA+CGG - Chr8:86836503-86836522 MsG0880047469.01.T01:intron 45.0%
GTGTAGAATTCCTTTCTGCG+TGG - Chr8:86834052-86834071 MsG0880047469.01.T01:CDS 45.0%
TCGGGTGTTCCGCTTATATA+CGG - Chr8:86834761-86834780 MsG0880047469.01.T01:intron 45.0%
TGACTTCAGAGCAAGCTCTA+AGG + Chr8:86833807-86833826 None:intergenic 45.0%
TGATCAAGGTGAGGAATGAG+TGG + Chr8:86836993-86837012 None:intergenic 45.0%
TGGATTTCAACCCTAGTGAG+TGG - Chr8:86837188-86837207 MsG0880047469.01.T01:CDS 45.0%
! AATGTCGCTTGTGAGAACTG+TGG + Chr8:86835155-86835174 None:intergenic 45.0%
! ATGTCGCTTGTGAGAACTGT+GGG + Chr8:86835154-86835173 None:intergenic 45.0%
! CACACACTCTCATCTGAGAT+CGG - Chr8:86832042-86832061 MsG0880047469.01.T01:three_prime_UTR 45.0%
! CCATTTCCGTTTTCCAGTGT+TGG - Chr8:86832104-86832123 MsG0880047469.01.T01:three_prime_UTR 45.0%
! CTCATCTGAGATCGGAATCA+AGG - Chr8:86832050-86832069 MsG0880047469.01.T01:three_prime_UTR 45.0%
!! ACAAAGGCGCCGTATATAAG+CGG + Chr8:86834773-86834792 None:intergenic 45.0%
!! CTCAACTTTGGTGTTCAGGA+CGG - Chr8:86834575-86834594 MsG0880047469.01.T01:CDS 45.0%
!! GGACGGGGGTTTTATCTTTT+AGG - Chr8:86834592-86834611 MsG0880047469.01.T01:CDS 45.0%
!! GTGAAGGAGTCTGTTTTAGG+AGG - Chr8:86834684-86834703 MsG0880047469.01.T01:intron 45.0%
!! TACAGTTGTCGGTTTCGTGA+AGG - Chr8:86834668-86834687 MsG0880047469.01.T01:intron 45.0%
!! TCAACTTTGGTGTTCAGGAC+GGG - Chr8:86834576-86834595 MsG0880047469.01.T01:CDS 45.0%
!! TCCGTTTAGTTTGCAACCCA+CGG + Chr8:86831992-86832011 None:intergenic 45.0%
!! TGTCTTTGAGACCTTGCAGA+AGG - Chr8:86832896-86832915 MsG0880047469.01.T01:intron 45.0%
!! TGTTGGTGTCAGACAAGTGT+CGG - Chr8:86832630-86832649 MsG0880047469.01.T01:intron 45.0%
!!! GAGGTGACGTGTATTTTGGT+GGG - Chr8:86834703-86834722 MsG0880047469.01.T01:intron 45.0%
!!! GATTGGTTTTCTGACACCGA+CGG + Chr8:86832163-86832182 None:intergenic 45.0%
AACAGAGACCGGCGAAATTG+AGG + Chr8:86834802-86834821 None:intergenic 50.0%
AACGGAAATGGAACCTGCGT+TGG + Chr8:86832095-86832114 None:intergenic 50.0%
AATTGAGGGGGGGGAATCAA+TGG + Chr8:86833508-86833527 None:intergenic 50.0%
ACACCCTAAAAACACCCTGG+AGG + Chr8:86834735-86834754 None:intergenic 50.0%
ACTAAAGCTTCCGCATACGC+AGG + Chr8:86833166-86833185 None:intergenic 50.0%
CAACACGGTTTGAGCTAGGA+TGG - Chr8:86836906-86836925 MsG0880047469.01.T01:intron 50.0%
CCCATCATCTTTGCCTTGAG+AGG + Chr8:86832408-86832427 None:intergenic 50.0%
CCCCCCCTCAATTAAGCTAT+TGG - Chr8:86833515-86833534 MsG0880047469.01.T01:intron 50.0%
CTAAAGCTTCCGCATACGCA+GGG + Chr8:86833165-86833184 None:intergenic 50.0%
GAGTAGTGACGATGGATGGT+TGG - Chr8:86834635-86834654 MsG0880047469.01.T01:intron 50.0%
GATTTGTCCAGCCTTGGATC+AGG + Chr8:86837130-86837149 None:intergenic 50.0%
GCCTCTCAAGGCAAAGATGA+TGG - Chr8:86832404-86832423 MsG0880047469.01.T01:CDS 50.0%
GCTATACCGCTATAGCGTAG+TGG + Chr8:86836865-86836884 None:intergenic 50.0%
GCTATAGCACTACTGCGTAG+TGG + Chr8:86836769-86836788 None:intergenic 50.0%
GGAGGTAAACTCCACTCACT+AGG + Chr8:86837202-86837221 None:intergenic 50.0%
GTCTCTGTTCGTCTTGAGCA+AGG - Chr8:86834813-86834832 MsG0880047469.01.T01:intron 50.0%
GTGTGTTGCCTCAGAACACT+CGG - Chr8:86836935-86836954 MsG0880047469.01.T01:intron 50.0%
GTTCGTCTTGAGCAAGGATC+AGG - Chr8:86834819-86834838 MsG0880047469.01.T01:intron 50.0%
GTTCGTGCAGCTAAGAATGC+TGG - Chr8:86835545-86835564 MsG0880047469.01.T01:intron 50.0%
TATGGTTCCTGATCCAAGGC+TGG - Chr8:86837120-86837139 MsG0880047469.01.T01:CDS 50.0%
TGCTCAAGACGAACAGAGAC+CGG + Chr8:86834813-86834832 None:intergenic 50.0%
TTAGCTGCACGAACTCCAGA+GGG + Chr8:86835539-86835558 None:intergenic 50.0%
TTCCAATTGCCGTGGCAACT+GGG - Chr8:86835002-86835021 MsG0880047469.01.T01:intron 50.0%
! ATGCGGAAGCTTTAGTGCAC+CGG - Chr8:86833170-86833189 MsG0880047469.01.T01:intron 50.0%
! CCCGTGGGTTGCAAACTAAA+CGG - Chr8:86831988-86832007 MsG0880047469.01.T01:three_prime_UTR 50.0%
! GGTTAGGAGTTTAGCGGATG+TGG - Chr8:86834552-86834571 MsG0880047469.01.T01:intron 50.0%
! TAGCGGATGTGGCTCAACTT+TGG - Chr8:86834563-86834582 MsG0880047469.01.T01:intron 50.0%
! TGTCGCTTGTGAGAACTGTG+GGG + Chr8:86835153-86835172 None:intergenic 50.0%
!! AACTTTGGTGTTCAGGACGG+GGG - Chr8:86834578-86834597 MsG0880047469.01.T01:CDS 50.0%
!! AGGTCCTCCAGGGTGTTTTT+AGG - Chr8:86834728-86834747 MsG0880047469.01.T01:intron 50.0%
!! CAACTTTGGTGTTCAGGACG+GGG - Chr8:86834577-86834596 MsG0880047469.01.T01:CDS 50.0%
!! CCGTTTAGTTTGCAACCCAC+GGG + Chr8:86831991-86832010 None:intergenic 50.0%
!! GGAGGTGACGTGTATTTTGG+TGG - Chr8:86834702-86834721 MsG0880047469.01.T01:intron 50.0%
!! GGTCCTCCAGGGTGTTTTTA+GGG - Chr8:86834729-86834748 MsG0880047469.01.T01:intron 50.0%
!! GTGGCTCAACTTTGGTGTTC+AGG - Chr8:86834571-86834590 MsG0880047469.01.T01:intron 50.0%
!! GTTTTTGAAGACGCACCCTC+TGG - Chr8:86835521-86835540 MsG0880047469.01.T01:intron 50.0%
!!! GACGTGTATTTTGGTGGGTG+AGG - Chr8:86834708-86834727 MsG0880047469.01.T01:intron 50.0%
ATGACCAATCCCTCCTCCGT+CGG - Chr8:86832144-86832163 MsG0880047469.01.T01:three_prime_UTR 55.0%
ATGGATCGGAGGATGAGAGG+TGG - Chr8:86834509-86834528 MsG0880047469.01.T01:intron 55.0%
CTTAGCTGCACGAACTCCAG+AGG + Chr8:86835540-86835559 None:intergenic 55.0%
GACATGGACGGTCTCTTGCT+AGG - Chr8:86832198-86832217 MsG0880047469.01.T01:three_prime_UTR 55.0%
GCGAGCTCATGCCAGGTAAA+TGG - Chr8:86832547-86832566 MsG0880047469.01.T01:intron 55.0%
GCGCTGTTATGAGCCAACAC+TGG + Chr8:86832120-86832139 None:intergenic 55.0%
GCTGTTGTCACAACCAACGC+AGG - Chr8:86832079-86832098 MsG0880047469.01.T01:three_prime_UTR 55.0%
GGGTGAGTAGTGACGATGGA+TGG - Chr8:86834631-86834650 MsG0880047469.01.T01:intron 55.0%
GGTTTCTCTCGATGGATCGG+AGG - Chr8:86834498-86834517 MsG0880047469.01.T01:intron 55.0%
GTTCCAATTGCCGTGGCAAC+TGG - Chr8:86835001-86835020 MsG0880047469.01.T01:intron 55.0%
TACCCAGTTGCCACGGCAAT+TGG + Chr8:86835007-86835026 None:intergenic 55.0%
TCGATGGATCGGAGGATGAG+AGG - Chr8:86834506-86834525 MsG0880047469.01.T01:intron 55.0%
TGATCAACAGGGTGGACCAG+TGG - Chr8:86835481-86835500 MsG0880047469.01.T01:intron 55.0%
TGCTGCAGCCAGGAGATTTG+AGG - Chr8:86835284-86835303 MsG0880047469.01.T01:intron 55.0%
TTGGGGGTGAGTAGTGACGA+TGG - Chr8:86834627-86834646 MsG0880047469.01.T01:intron 55.0%
TTTCTGACACCGACGGAGGA+GGG + Chr8:86832156-86832175 None:intergenic 55.0%
TTTGGTCCAACTTGGCCCGT+GGG - Chr8:86831973-86831992 MsG0880047469.01.T01:three_prime_UTR 55.0%
! TGCGGAAGCTTTAGTGCACC+GGG - Chr8:86833171-86833190 MsG0880047469.01.T01:intron 55.0%
! TGGTTTTCTGACACCGACGG+AGG + Chr8:86832160-86832179 None:intergenic 55.0%
! TTTTCTGACACCGACGGAGG+AGG + Chr8:86832157-86832176 None:intergenic 55.0%
! TTTTGGTCCAACTTGGCCCG+TGG - Chr8:86831972-86831991 MsG0880047469.01.T01:three_prime_UTR 55.0%
CCAACAAGCGAGCTCATGCC+AGG - Chr8:86832540-86832559 MsG0880047469.01.T01:intron 60.0%
CCTGGCATGAGCTCGCTTGT+TGG + Chr8:86832543-86832562 None:intergenic 60.0%
GATCGGAGGATGAGAGGTGG+TGG - Chr8:86834512-86834531 MsG0880047469.01.T01:intron 60.0%
TTGCAACCCACGGGCCAAGT+TGG + Chr8:86831982-86832001 None:intergenic 60.0%
! CCAAATGGTGGGACCCCTTC+CGG - Chr8:86833138-86833157 MsG0880047469.01.T01:intron 60.0%
! GCGGAAGCTTTAGTGCACCG+GGG - Chr8:86833172-86833191 MsG0880047469.01.T01:intron 60.0%
! TTGGTGGGTGAGGTCCTCCA+GGG - Chr8:86834718-86834737 MsG0880047469.01.T01:intron 60.0%
! TTTGGTGGGTGAGGTCCTCC+AGG - Chr8:86834717-86834736 MsG0880047469.01.T01:intron 60.0%
CCGGAAGGGGTCCCACCATT+TGG + Chr8:86833141-86833160 None:intergenic 65.0%
CCTTCCGGACCCTGCGTATG+CGG - Chr8:86833153-86833172 MsG0880047469.01.T01:intron 65.0%
CGCATACGCAGGGTCCGGAA+GGG + Chr8:86833155-86833174 None:intergenic 65.0%
GACACCGACGGAGGAGGGAT+TGG + Chr8:86832151-86832170 None:intergenic 65.0%
GAGGGGGGGGAATCAATGGC+TGG + Chr8:86833504-86833523 None:intergenic 65.0%
GCATACGCAGGGTCCGGAAG+GGG + Chr8:86833154-86833173 None:intergenic 65.0%
GCTTCCGCATACGCAGGGTC+CGG + Chr8:86833160-86833179 None:intergenic 65.0%
CCGCATACGCAGGGTCCGGA+AGG + Chr8:86833156-86833175 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 86831949 86837646 86831949 ID=MsG0880047469.01;Name=MsG0880047469.01
Chr8 mRNA 86831949 86837646 86831949 ID=MsG0880047469.01.T01;Parent=MsG0880047469.01;Name=MsG0880047469.01.T01;_AED=0.39;_eAED=0.39;_QI=0|1|0.83|1|1|1|6|403|305
Chr8 exon 86831949 86832484 86831949 ID=MsG0880047469.01.T01:exon:17959;Parent=MsG0880047469.01.T01
Chr8 exon 86834025 86834104 86834025 ID=MsG0880047469.01.T01:exon:17958;Parent=MsG0880047469.01.T01
Chr8 exon 86834290 86834437 86834290 ID=MsG0880047469.01.T01:exon:17957;Parent=MsG0880047469.01.T01
Chr8 exon 86834572 86834632 86834572 ID=MsG0880047469.01.T01:exon:17956;Parent=MsG0880047469.01.T01
Chr8 exon 86837034 86837258 86837034 ID=MsG0880047469.01.T01:exon:17955;Parent=MsG0880047469.01.T01
Chr8 exon 86837376 86837646 86837376 ID=MsG0880047469.01.T01:exon:17954;Parent=MsG0880047469.01.T01
Chr8 CDS 86837376 86837646 86837376 ID=MsG0880047469.01.T01:cds;Parent=MsG0880047469.01.T01
Chr8 CDS 86837034 86837258 86837034 ID=MsG0880047469.01.T01:cds;Parent=MsG0880047469.01.T01
Chr8 CDS 86834572 86834632 86834572 ID=MsG0880047469.01.T01:cds;Parent=MsG0880047469.01.T01
Chr8 CDS 86834290 86834437 86834290 ID=MsG0880047469.01.T01:cds;Parent=MsG0880047469.01.T01
Chr8 CDS 86834025 86834104 86834025 ID=MsG0880047469.01.T01:cds;Parent=MsG0880047469.01.T01
Chr8 CDS 86832352 86832484 86832352 ID=MsG0880047469.01.T01:cds;Parent=MsG0880047469.01.T01
Chr8 three_prime_UTR 86831949 86832351 86831949 ID=MsG0880047469.01.T01:three_prime_utr;Parent=MsG0880047469.01.T01
Gene Sequence

>MsG0880047469.01.T01

ATGAATCTAACGACGGTGAGAAATTTTGGTCCAACTTGGCCCGTGGGTTGCAAACTAAACGGACCCCAAATTAAAAAGGCAGTTTTCACTTTTCACACACTCTCATCTGAGATCGGAATCAAGGCTCTGAGCTGTTGTCACAACCAACGCAGGTTCCATTTCCGTTTTCCAGTGTTGGCTCATAACAGCGCAACAATGACCAATCCCTCCTCCGTCGGTGTCAGAAAACCAATCACACATGTCGTTTTTGACATGGACGGTCTCTTGCTAGACACTGAGAAGTTCTATACTCAAGTTCAAGAAATTATACTTGCTAGATACAATAAAACTTTTGAATGGCCTCTCAAGGCAAAGATGATGGGCATGAAAGCGATTGAAGCTGCTAAGGTTTTTGTTGAAGAGACTGGAATCAGTGATTCTCTTTCTGCCGACCAATTTCTTGTTGAAAGAGAAGATATGCTGCGGAGTTTGTTTCCAACAAGCGAGCTCATGCCAGGTGTTAGTCGTTTACTCAAGCATCTACATGCAAAAGGAGTTCCAATTGCCGTGGCAACTGGTTCTCACAAGCGACATTTTGAACTGAAAACGCAAAGACACGGGGAAATGTTTTCTCTGATGCATCATGTTGTTCTTGGTGATGACCCTGAAGTTAAACAAGGCAAACCATCACCAGATGTATTTCTTGCTGCAGCCAGGAGATTTGAGGGTGGACCAGTGGATCCGAGTAATATTCTTGTTTTTGAAGACGCACCCTCTGGAGTTCGTGCAGCTAAGAATGCTGGAATGTCTGTTGTTATGGTTCCTGATCCAAGGCTGGACAAATCTTTTCAAGATGCAGCAGACCAAGTTTTGAACTCATTGTTGGATTTCAACCCTAGTGAGTGGAGTTTACCTCCGTTTGAAGATAATGGAAATTGA
Protein sequence

>MsG0880047469.01.T01

MNLTTVRNFGPTWPVGCKLNGPQIKKAVFTFHTLSSEIGIKALSCCHNQRRFHFRFPVLAHNSATMTNPSSVGVRKPITHVVFDMDGLLLDTEKFYTQVQEIILARYNKTFEWPLKAKMMGMKAIEAAKVFVEETGISDSLSADQFLVEREDMLRSLFPTSELMPGVSRLLKHLHAKGVPIAVATGSHKRHFELKTQRHGEMFSLMHHVVLGDDPEVKQGKPSPDVFLAAARRFEGGPVDPSNILVFEDAPSGVRAAKNAGMSVVMVPDPRLDKSFQDAADQVLNSLLDFNPSEWSLPPFEDNGN*