AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026301.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026301.01.T01 MTR_5g043640 95.951 247 10 0 8 254 1 247 9.63e-164 453
MsG0580026301.01.T01 MTR_2g048680 36.691 139 88 0 95 233 66 204 3.26e-21 89.4
MsG0580026301.01.T01 MTR_2g048680 34.395 157 96 4 56 211 64 214 3.56e-18 81.3
MsG0580026301.01.T01 MTR_2g048680 36.957 138 87 0 96 233 147 284 6.74e-21 90.1
MsG0580026301.01.T01 MTR_2g048680 36.585 123 75 3 90 211 174 294 4.55e-17 79.3
MsG0580026301.01.T01 MTR_7g100430 33.690 187 119 4 20 203 117 301 2.43e-20 90.1
MsG0580026301.01.T01 MTR_1g089180 32.609 184 98 4 58 219 250 429 2.92e-19 86.7
MsG0580026301.01.T01 MTR_1g089180 29.319 191 114 1 64 233 220 410 3.85e-14 72.0
MsG0580026301.01.T01 MTR_6g027840 30.457 197 114 2 58 233 273 467 7.14e-18 82.8
MsG0580026301.01.T01 MTR_6g027840 32.704 159 106 1 76 233 156 314 4.80e-16 77.4
MsG0580026301.01.T01 MTR_6g027840 29.787 188 128 2 47 233 163 347 2.80e-14 72.4
MsG0580026301.01.T01 MTR_6g027840 29.570 186 112 4 15 200 301 467 3.68e-14 72.0
MsG0580026301.01.T01 MTR_2g096190 32.105 190 123 5 33 219 108 294 1.19e-17 82.4
MsG0580026301.01.T01 MTR_2g096190 31.351 185 120 6 54 233 59 241 3.58e-13 68.9
MsG0580026301.01.T01 MTR_1g112830 35.542 166 94 6 58 215 196 356 1.33e-17 82.4
MsG0580026301.01.T01 MTR_1g112830 29.319 191 127 3 44 233 123 306 1.55e-15 76.3
MsG0580026301.01.T01 MTR_5g022050 32.609 138 93 0 96 233 258 395 8.89e-17 79.3
MsG0580026301.01.T01 MTR_5g022050 31.973 147 97 1 54 200 252 395 3.50e-15 74.7
MsG0580026301.01.T01 MTR_1g115575 32.447 188 120 5 20 203 125 309 1.20e-16 79.3
MsG0580026301.01.T01 MTR_4g116160 35.032 157 96 3 62 215 104 257 1.80e-16 79.0
MsG0580026301.01.T01 MTR_4g116160 28.902 173 120 2 62 233 37 207 1.35e-13 70.5
MsG0580026301.01.T01 MTR_4g116160 31.176 170 112 3 90 254 96 265 4.75e-13 68.6
MsG0580026301.01.T01 MTR_4g116160 35.032 157 96 3 62 215 104 257 2.75e-16 78.6
MsG0580026301.01.T01 MTR_4g116160 28.902 173 120 2 62 233 37 207 1.18e-13 70.5
MsG0580026301.01.T01 MTR_4g116160 31.176 170 112 3 90 254 96 265 7.92e-13 68.2
MsG0580026301.01.T01 MTR_5g023090 31.159 138 95 0 96 233 292 429 3.61e-16 77.8
MsG0580026301.01.T01 MTR_5g023090 31.973 147 97 1 54 200 286 429 5.52e-15 74.3
MsG0580026301.01.T01 MTR_7g117620 37.013 154 91 5 48 199 171 320 4.00e-16 77.8
MsG0580026301.01.T01 MTR_7g117620 37.857 140 80 5 65 200 154 290 1.06e-15 76.6
MsG0580026301.01.T01 MTR_7g117620 31.892 185 119 6 54 233 74 256 1.49e-13 70.1
MsG0580026301.01.T01 MTR_3g491870 41.237 97 57 0 133 229 240 336 1.16e-15 75.9
MsG0580026301.01.T01 MTR_3g491870 35.780 109 67 1 101 209 241 346 1.77e-15 75.5
MsG0580026301.01.T01 MTR_3g491870 43.023 86 49 0 80 165 253 338 8.56e-14 70.5
MsG0580026301.01.T01 MTR_3g009280 37.589 141 81 1 82 215 202 342 1.16e-15 75.9
MsG0580026301.01.T01 MTR_1g011755 32.919 161 75 2 104 231 518 678 2.34e-15 75.9
MsG0580026301.01.T01 MTR_1g011755 29.167 168 112 4 30 196 515 676 2.34e-12 67.0
MsG0580026301.01.T01 MTR_8g056020 34.188 117 77 0 104 220 236 352 2.82e-15 74.7
MsG0580026301.01.T01 MTR_4g062100 32.105 190 123 5 33 219 112 298 3.38e-15 75.1
MsG0580026301.01.T01 MTR_4g062100 29.787 188 121 5 1 186 120 298 2.21e-12 66.6
MsG0580026301.01.T01 MTR_4g092760 30.625 160 107 3 90 246 116 274 8.68e-15 73.9
MsG0580026301.01.T01 MTR_4g063830 32.000 225 125 6 26 229 12 229 1.08e-14 73.6
MsG0580026301.01.T01 MTR_4g092760 30.625 160 107 3 90 246 28 186 1.38e-14 73.2
MsG0580026301.01.T01 MTR_5g026800 33.113 151 96 2 65 215 15 160 1.72e-14 71.6
MsG0580026301.01.T01 MTR_5g026800 30.822 146 100 1 101 245 15 160 1.45e-11 63.2
MsG0580026301.01.T01 MTR_3g107720 32.121 165 79 3 100 231 537 701 1.90e-14 73.2
MsG0580026301.01.T01 MTR_5g077770 34.615 156 97 2 60 215 587 737 4.44e-14 72.0
MsG0580026301.01.T01 MTR_5g077770 32.331 133 88 1 101 233 559 689 4.33e-12 66.2
MsG0580026301.01.T01 MTR_7g115280 32.955 176 114 4 50 224 43 215 5.07e-14 71.6
MsG0580026301.01.T01 MTR_7g115280 31.285 179 114 5 54 229 80 252 7.11e-14 71.2
MsG0580026301.01.T01 MTR_7g115280 31.544 149 98 3 86 233 46 191 3.85e-13 68.9
MsG0580026301.01.T01 MTR_1g112820 32.484 157 100 3 65 215 168 324 1.96e-13 70.1
MsG0580026301.01.T01 MTR_2g017825 43.678 87 49 0 134 220 42 128 2.28e-13 68.6
MsG0580026301.01.T01 MTR_2g017825 43.678 87 49 0 134 220 42 128 3.22e-13 68.9
MsG0580026301.01.T01 MTR_2g017825 43.678 87 49 0 134 220 42 128 3.76e-13 68.6
MsG0580026301.01.T01 MTR_2g017825 43.678 87 49 0 134 220 42 128 4.12e-13 68.6
MsG0580026301.01.T01 MTR_5g026550 38.000 100 56 2 94 187 26 125 4.46e-13 65.9
MsG0580026301.01.T01 MTR_2g017825 43.678 87 49 0 134 220 42 128 5.32e-13 68.6
MsG0580026301.01.T01 MTR_2g017825 43.678 87 49 0 134 220 42 128 5.77e-13 68.6
MsG0580026301.01.T01 MTR_2g006870 28.230 209 117 3 45 222 486 692 6.41e-13 68.6
MsG0580026301.01.T01 MTR_3g085630 34.932 146 86 4 97 233 484 629 7.15e-13 68.6
MsG0580026301.01.T01 MTR_4g129470 33.333 153 76 6 65 203 34 174 7.61e-13 67.8
MsG0580026301.01.T01 MTR_4g129470 33.333 153 76 6 65 203 122 262 1.03e-12 67.8
MsG0580026301.01.T01 MTR_3g088410 40.000 90 54 0 115 204 38 127 1.13e-12 64.3
MsG0580026301.01.T01 MTR_3g088410 31.852 135 85 3 11 145 7 134 6.50e-12 62.4
MsG0580026301.01.T01 MTR_3g088410 31.532 111 76 0 80 190 36 146 7.46e-11 59.3
MsG0580026301.01.T01 MTR_7g100390 31.651 218 143 5 20 233 43 258 1.88e-12 67.0
MsG0580026301.01.T01 MTR_1g032100 32.258 186 109 6 27 203 57 234 2.66e-12 66.6
MsG0580026301.01.T01 MTR_6g088470 34.783 161 91 5 99 245 15 175 2.82e-12 66.2
MsG0580026301.01.T01 MTR_6g088470 37.097 124 72 3 65 182 52 175 5.79e-12 65.5
MsG0580026301.01.T01 MTR_8g088590 39.394 99 57 1 105 203 84 179 4.15e-12 65.9
MsG0580026301.01.T01 MTR_4g113530 31.250 160 78 1 104 231 525 684 5.59e-12 65.9
MsG0580026301.01.T01 MTR_2g101310 34.752 141 86 5 99 233 140 280 1.34e-11 64.7
MsG0580026301.01.T01 MTR_8g105260 29.108 213 141 6 27 233 64 272 1.92e-11 63.9
MsG0580026301.01.T01 MTR_7g031370 29.609 179 113 5 30 203 447 617 1.93e-11 63.9
MsG0580026301.01.T01 MTR_7g031370 29.609 179 113 5 30 203 287 457 1.95e-11 63.9
MsG0580026301.01.T01 MTR_2g101310 34.752 141 86 5 99 233 140 280 3.64e-11 63.2
MsG0580026301.01.T01 MTR_5g091880 37.363 91 57 0 134 224 54 144 4.47e-11 62.8
MsG0580026301.01.T01 MTR_4g074170 37.363 91 54 1 97 184 682 772 8.43e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026301.01.T01 AT2G03430 69.710 241 71 2 14 254 1 239 7.19e-120 342
MsG0580026301.01.T01 AT5G66055 35.766 137 88 0 98 234 261 397 1.87e-21 92.8
MsG0580026301.01.T01 AT5G66055 32.353 136 89 1 65 200 264 396 1.18e-13 70.5
MsG0580026301.01.T01 AT1G07710 34.737 190 118 5 33 219 108 294 1.17e-19 88.2
MsG0580026301.01.T01 AT1G07710 34.737 190 118 5 33 219 108 294 1.17e-19 88.2
MsG0580026301.01.T01 AT5G02620 32.821 195 126 4 27 218 57 249 2.28e-18 84.3
MsG0580026301.01.T01 AT5G02620 32.821 195 126 4 27 218 57 249 2.28e-18 84.3
MsG0580026301.01.T01 AT5G02620 32.821 195 126 4 27 218 57 249 2.28e-18 84.3
MsG0580026301.01.T01 AT5G02620 34.807 181 113 4 27 204 57 235 2.76e-18 84.3
MsG0580026301.01.T01 AT5G02620 29.412 255 160 8 18 253 7 260 4.00e-16 77.8
MsG0580026301.01.T01 AT5G02620 34.807 181 113 4 27 204 57 235 2.76e-18 84.3
MsG0580026301.01.T01 AT5G02620 29.412 255 160 8 18 253 7 260 4.00e-16 77.8
MsG0580026301.01.T01 AT3G04710 31.308 214 106 4 55 233 49 256 3.21e-17 80.9
MsG0580026301.01.T01 AT3G04710 32.026 153 95 3 101 244 18 170 2.98e-11 63.2
MsG0580026301.01.T01 AT3G04710 31.308 214 106 4 55 233 273 480 4.00e-17 80.9
MsG0580026301.01.T01 AT3G04710 33.803 142 85 3 101 233 242 383 3.49e-11 63.5
MsG0580026301.01.T01 AT4G35450 40.000 115 69 0 101 215 184 298 1.05e-16 78.2
MsG0580026301.01.T01 AT4G35450 40.000 115 69 0 101 215 230 344 1.41e-16 78.6
MsG0580026301.01.T01 AT4G35450 40.000 115 69 0 101 215 222 336 1.45e-16 78.2
MsG0580026301.01.T01 AT4G35450 40.000 115 69 0 101 215 222 336 1.45e-16 78.2
MsG0580026301.01.T01 AT4G35450 40.000 115 69 0 101 215 222 336 1.45e-16 78.2
MsG0580026301.01.T01 AT3G02850 38.125 160 90 3 58 215 578 730 2.47e-16 78.6
MsG0580026301.01.T01 AT3G02850 36.842 133 82 2 101 233 552 682 4.54e-15 75.1
MsG0580026301.01.T01 AT3G02850 38.125 160 90 3 58 215 578 730 2.88e-16 78.6
MsG0580026301.01.T01 AT3G02850 36.842 133 82 2 101 233 552 682 5.24e-15 74.7
MsG0580026301.01.T01 AT5G37500 31.282 195 127 3 21 215 526 713 3.20e-16 78.2
MsG0580026301.01.T01 AT5G37500 33.113 151 96 2 45 193 480 627 5.76e-13 68.6
MsG0580026301.01.T01 AT5G20350 32.597 181 111 5 62 237 99 273 3.88e-16 78.2
MsG0580026301.01.T01 AT5G20350 30.000 190 122 4 48 233 20 202 6.39e-16 77.4
MsG0580026301.01.T01 AT4G19150 32.593 135 89 1 65 199 20 152 4.60e-16 75.5
MsG0580026301.01.T01 AT4G19150 33.696 184 109 7 29 208 19 193 3.50e-15 73.2
MsG0580026301.01.T01 AT5G53470 40.816 98 58 0 70 167 224 321 9.07e-16 76.3
MsG0580026301.01.T01 AT5G53470 38.000 100 62 0 101 200 222 321 1.12e-14 72.8
MsG0580026301.01.T01 AT5G53470 34.653 101 66 0 133 233 221 321 4.07e-12 65.5
MsG0580026301.01.T01 AT3G04710 30.769 208 103 4 55 227 49 250 1.01e-15 76.6
MsG0580026301.01.T01 AT3G04710 33.582 134 87 2 101 233 59 191 1.96e-12 67.0
MsG0580026301.01.T01 AT3G04710 32.026 153 95 3 101 244 18 170 2.87e-11 63.5
MsG0580026301.01.T01 AT4G27780 38.000 100 62 0 101 200 237 336 1.43e-15 75.5
MsG0580026301.01.T01 AT4G27780 40.000 110 57 1 71 180 240 340 2.31e-14 72.0
MsG0580026301.01.T01 AT4G27780 33.663 101 67 0 133 233 236 336 8.82e-12 64.7
MsG0580026301.01.T01 AT2G14255 27.755 245 167 5 14 252 9 249 2.30e-15 75.5
MsG0580026301.01.T01 AT2G17390 37.391 115 72 0 101 215 224 338 6.08e-15 73.9
MsG0580026301.01.T01 AT5G60070 31.282 195 121 7 33 219 115 304 7.73e-15 73.9
MsG0580026301.01.T01 AT5G60070 28.889 180 114 5 12 186 134 304 1.82e-13 70.1
MsG0580026301.01.T01 AT2G31820 33.571 140 86 5 65 200 262 398 1.19e-14 73.6
MsG0580026301.01.T01 AT2G31820 36.923 130 78 3 60 187 291 418 5.23e-14 71.6
MsG0580026301.01.T01 AT2G31820 30.417 240 152 7 20 249 183 417 7.82e-14 71.2
MsG0580026301.01.T01 AT5G40160 28.261 138 99 0 96 233 151 288 1.57e-14 72.4
MsG0580026301.01.T01 AT5G40160 29.286 140 90 4 90 222 178 315 1.41e-12 66.6
MsG0580026301.01.T01 AT2G26650 32.450 151 71 2 112 231 533 683 1.58e-14 73.6
MsG0580026301.01.T01 AT2G26650 31.757 148 87 4 58 199 545 684 6.64e-13 68.6
MsG0580026301.01.T01 AT2G26650 32.450 151 71 2 112 231 428 578 1.60e-14 73.2
MsG0580026301.01.T01 AT2G26650 31.757 148 87 4 58 199 440 579 6.24e-13 68.6
MsG0580026301.01.T01 AT1G05640 29.536 237 158 6 20 249 147 381 1.78e-14 73.2
MsG0580026301.01.T01 AT1G05640 37.405 131 76 4 60 187 255 382 1.88e-13 70.1
MsG0580026301.01.T01 AT3G12360 30.052 193 130 4 27 216 130 320 2.99e-14 72.4
MsG0580026301.01.T01 AT3G12360 30.052 193 130 4 27 216 118 308 3.05e-14 72.4
MsG0580026301.01.T01 AT2G25600 32.716 162 78 1 104 234 551 712 4.34e-14 72.0
MsG0580026301.01.T01 AT2G25600 31.677 161 105 2 58 218 574 729 1.33e-13 70.5
MsG0580026301.01.T01 AT5G37500 32.000 150 97 2 66 215 537 681 5.68e-14 71.6
MsG0580026301.01.T01 AT5G40160 28.571 126 90 0 96 221 151 276 6.92e-14 70.1
MsG0580026301.01.T01 AT5G40160 30.579 121 77 3 90 209 178 292 4.35e-13 68.2
MsG0580026301.01.T01 AT5G37500 32.000 150 97 2 66 215 591 735 7.94e-14 71.2
MsG0580026301.01.T01 AT3G09550 31.073 177 117 4 27 200 144 318 7.94e-14 71.2
MsG0580026301.01.T01 AT3G09550 31.073 177 117 4 27 200 144 318 7.94e-14 71.2
MsG0580026301.01.T01 AT3G09550 31.073 177 117 4 27 200 151 325 8.20e-14 71.2
MsG0580026301.01.T01 AT4G32500 33.333 159 75 1 104 231 549 707 1.69e-13 70.5
MsG0580026301.01.T01 AT4G32500 35.172 145 84 5 58 198 569 707 2.25e-11 63.9
MsG0580026301.01.T01 AT5G57740 33.553 152 76 6 65 203 122 261 2.15e-13 69.7
MsG0580026301.01.T01 AT5G61230 38.000 100 56 2 94 187 26 125 1.89e-12 64.3
MsG0580026301.01.T01 AT3G24530 33.566 143 86 4 65 198 6 148 2.00e-12 66.6
MsG0580026301.01.T01 AT3G24530 33.566 143 86 4 65 198 54 196 2.48e-12 66.6
MsG0580026301.01.T01 AT4G19150 32.323 99 67 0 101 199 31 129 4.05e-12 64.3
MsG0580026301.01.T01 AT4G19150 33.333 147 88 5 65 208 31 170 3.11e-11 61.6
MsG0580026301.01.T01 AT3G59830 30.994 171 109 3 35 198 9 177 4.49e-12 65.9
MsG0580026301.01.T01 AT2G01680 29.442 197 134 4 27 220 60 254 7.69e-12 65.1
MsG0580026301.01.T01 AT5G66055 33.333 99 66 0 98 196 261 359 8.01e-12 64.7
MsG0580026301.01.T01 AT5G12320 35.644 101 65 0 104 204 18 118 1.16e-11 61.6
MsG0580026301.01.T01 AT5G07270 31.544 149 83 4 62 200 113 252 1.18e-11 64.7
MsG0580026301.01.T01 AT1G10870 42.391 92 50 1 96 184 687 778 1.24e-11 64.7
MsG0580026301.01.T01 AT1G10870 42.391 92 50 1 96 184 682 773 1.27e-11 64.7
MsG0580026301.01.T01 AT5G13530 32.576 132 82 3 126 254 507 634 1.71e-11 64.3
MsG0580026301.01.T01 AT5G13530 32.576 132 82 3 126 254 507 634 1.71e-11 64.3
MsG0580026301.01.T01 AT2G28840 26.697 221 142 4 26 229 11 228 3.90e-11 63.2
MsG0580026301.01.T01 AT4G03490 31.461 178 104 5 29 200 221 386 6.01e-11 62.8
MsG0580026301.01.T01 AT3G28880 29.189 185 113 4 87 254 15 198 6.11e-11 62.4
MsG0580026301.01.T01 AT2G31800 37.374 99 59 1 105 203 83 178 7.10e-11 62.4
MsG0580026301.01.T01 AT3G58760 37.349 83 52 0 105 187 57 139 8.61e-11 61.6
MsG0580026301.01.T01 AT2G43850 39.362 94 57 0 105 198 86 179 8.74e-11 62.0
MsG0580026301.01.T01 AT2G43850 39.362 94 57 0 105 198 86 179 8.74e-11 62.0
MsG0580026301.01.T01 AT2G43850 39.362 94 57 0 105 198 86 179 8.89e-11 62.0
MsG0580026301.01.T01 AT4G03490 31.461 178 104 5 29 200 221 386 8.90e-11 62.0
MsG0580026301.01.T01 AT4G03490 31.461 178 104 5 29 200 211 376 9.53e-11 62.0

Find 94 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTATCAGTTGAAATTTAT+TGG 0.153272 5:+34341585 None:intergenic
AAAATAATTTAATTGCTTAT+AGG 0.187133 5:-34341781 MsG0580026301.01.T01:three_prime_UTR
TCTCTCCACTTGAGAGTTTA+GGG 0.206869 5:-34342368 MsG0580026301.01.T01:three_prime_UTR
CATTGGGAATTCGGAGATTC+TGG 0.207112 5:-34347253 MsG0580026301.01.T01:CDS
AAATAATTTAATTGCTTATA+GGG 0.209520 5:-34341780 MsG0580026301.01.T01:three_prime_UTR
TAAATCCAATCATACTTTAA+AGG 0.211149 5:-34342200 MsG0580026301.01.T01:intron
TTATATTAATGTTGGCATTA+TGG 0.222000 5:+34345140 None:intergenic
CTTCATGTTGCCGCTTCTTT+TGG 0.229765 5:-34347965 MsG0580026301.01.T01:CDS
TTCTCTCCACTTGAGAGTTT+AGG 0.241143 5:-34342369 MsG0580026301.01.T01:three_prime_UTR
TATATTAATGTTGGCATTAT+GGG 0.246874 5:+34345141 None:intergenic
CTAATCCAAGAAAATTGTTT+TGG 0.255667 5:-34341675 MsG0580026301.01.T01:three_prime_UTR
GAATAAATCCTTCTCTTCTA+TGG 0.255756 5:+34348087 None:intergenic
AATCTTCATCCGACCTTTGC+TGG 0.277498 5:+34345180 None:intergenic
CTGATAATTACTTGCTATAA+AGG 0.288949 5:-34341571 MsG0580026301.01.T01:three_prime_UTR
AGGTAGCACTCCTTCTTATA+AGG 0.293510 5:-34342840 MsG0580026301.01.T01:CDS
TGCTGCCAGCATTGGGAATT+CGG 0.328342 5:-34347262 MsG0580026301.01.T01:CDS
ATGTTAACGGTTAATTTATT+AGG 0.333965 5:-34342476 MsG0580026301.01.T01:three_prime_UTR
TCATCTGCCTCATTCATTGC+AGG 0.340787 5:+34341626 None:intergenic
TTTGGCCTTTAAAGTATGAT+TGG 0.354260 5:+34342195 None:intergenic
TAATGCCAACATTAATATAA+AGG 0.359237 5:-34345137 MsG0580026301.01.T01:CDS
CAGCACTCATTAGAGGAGTT+TGG 0.367957 5:+34344866 None:intergenic
TTGCATCGGGCAGCTAGCAC+TGG 0.380682 5:-34344955 MsG0580026301.01.T01:CDS
TAAAGTATGATTGGATTTAG+AGG 0.392016 5:+34342204 None:intergenic
TATATATAGGAAAATGTTAA+CGG 0.401772 5:-34342489 MsG0580026301.01.T01:three_prime_UTR
ATTCATTCTGCTGCCAGCAT+TGG 0.404125 5:-34347270 MsG0580026301.01.T01:CDS
CAAATCACAGCACTCATTAG+AGG 0.411537 5:+34344859 None:intergenic
CAGAGAATATAGCTTCTCTA+AGG 0.414865 5:+34342331 None:intergenic
TTTAGATTTGTTTGAAGTTG+TGG 0.421465 5:-34342256 MsG0580026301.01.T01:three_prime_UTR
TTCATTCTGCTGCCAGCATT+GGG 0.422094 5:-34347269 MsG0580026301.01.T01:CDS
TGGTTCCACTCCGTTGCATC+GGG 0.430682 5:-34344968 MsG0580026301.01.T01:CDS
TAACGGTTAATTTATTAGGC+AGG 0.437489 5:-34342472 MsG0580026301.01.T01:three_prime_UTR
TTGAGAGTTTAGGGTTCAAA+AGG 0.438637 5:-34342359 MsG0580026301.01.T01:three_prime_UTR
TTGGTTCCACTCCGTTGCAT+CGG 0.444724 5:-34344969 MsG0580026301.01.T01:CDS
CTTGTCCTTTATATTAATGT+TGG 0.455131 5:+34345132 None:intergenic
GTATCATTCGAGCATGGTCT+TGG 0.456540 5:+34342723 None:intergenic
AATGGTCATACACATAAAAC+AGG 0.457405 5:+34342663 None:intergenic
GCATTCTTAACCAGTATTTG+AGG 0.457637 5:-34342578 MsG0580026301.01.T01:three_prime_UTR
GTTTCTTAGAGAAAGTGCTT+TGG 0.459972 5:+34348006 None:intergenic
GTGACAATAACCTCAAATAC+TGG 0.472834 5:+34342568 None:intergenic
TAGTGGTGATGAAGAAGGTT+GGG 0.479553 5:-34347298 MsG0580026301.01.T01:CDS
TTCAAACAAATCTAAACCGT+TGG 0.480168 5:+34342263 None:intergenic
CAACAAAGATTGAACTCTGC+AGG 0.486863 5:-34342435 MsG0580026301.01.T01:three_prime_UTR
TCATTGCAGGTTCAGATACA+AGG 0.488023 5:+34341639 None:intergenic
TTGCTGGTTACTACAACAGT+TGG 0.492023 5:+34341721 None:intergenic
CTGCTCCATGCCTTATAAGA+AGG 0.504054 5:+34342830 None:intergenic
GTGGATGTGGAGGACAAGGA+AGG 0.514850 5:-34342805 MsG0580026301.01.T01:CDS
CTCAAGTGGAGAGAAGAGAG+AGG 0.516524 5:+34342377 None:intergenic
TTTGCTGGCTGCATAGTGTA+AGG 0.518159 5:+34345195 None:intergenic
CACCTCAGCAGATGCATCAC+AGG 0.522750 5:+34347326 None:intergenic
ATAGTGGTGATGAAGAAGGT+TGG 0.527066 5:-34347299 MsG0580026301.01.T01:CDS
CAGCTGTTCAATTAATCCAA+CGG 0.527415 5:-34342279 MsG0580026301.01.T01:three_prime_UTR
GTGCTAGCTGCCCGATGCAA+CGG 0.528128 5:+34344958 None:intergenic
TTATTCAAAGCAGCAGAAGA+AGG 0.534236 5:-34348070 MsG0580026301.01.T01:CDS
AACGGTTAATTTATTAGGCA+GGG 0.534389 5:-34342471 MsG0580026301.01.T01:three_prime_UTR
GATACTAACACAAGAGAATG+AGG 0.535878 5:-34342705 MsG0580026301.01.T01:three_prime_UTR
AATCTCCGAATTCCCAATGC+TGG 0.540552 5:+34347257 None:intergenic
AAGAGACAGATATGCAAGGT+TGG 0.541804 5:+34342609 None:intergenic
TGACCATTGAGAGCATTCAA+TGG 0.542257 5:-34342648 MsG0580026301.01.T01:three_prime_UTR
TGCATCGGGCAGCTAGCACT+GGG 0.548238 5:-34344954 MsG0580026301.01.T01:CDS
AAGCCATTGAATGCTCTCAA+TGG 0.548310 5:+34342645 None:intergenic
CTGGAGGCTTTGTTGAACAA+AGG 0.556222 5:-34347234 MsG0580026301.01.T01:intron
AAGGAAGGGTACACAGTGCT+TGG 0.557442 5:-34342790 MsG0580026301.01.T01:CDS
GCACTCCTTCTTATAAGGCA+TGG 0.559998 5:-34342835 MsG0580026301.01.T01:CDS
TATAAGGCATGGAGCAGATG+TGG 0.564074 5:-34342824 MsG0580026301.01.T01:CDS
AGATGTGGATGTGGAGGACA+AGG 0.564628 5:-34342809 MsG0580026301.01.T01:CDS
TGTGATTTGTTATAACAAAG+AGG 0.565384 5:-34344845 MsG0580026301.01.T01:intron
TCAAGTGGAGAGAAGAGAGA+GGG 0.567569 5:+34342378 None:intergenic
AGAGTTTAGGGTTCAAAAGG+AGG 0.569405 5:-34342356 MsG0580026301.01.T01:three_prime_UTR
ACAAGAAACCATAGAAGAGA+AGG 0.572266 5:-34348095 MsG0580026301.01.T01:CDS
TTGAACCCTAAACTCTCAAG+TGG 0.577165 5:+34342363 None:intergenic
TTCAGAGGACAATGATTCGA+AGG 0.582576 5:+34348036 None:intergenic
GACAGATATGCAAGGTTGGT+AGG 0.582866 5:+34342613 None:intergenic
TGCTTTGGAGAGTGATTCAG+AGG 0.583109 5:+34348021 None:intergenic
TTACACTATGCAGCCAGCAA+AGG 0.589849 5:-34345193 MsG0580026301.01.T01:CDS
GTTGATGCTGTTGATAGAGC+TGG 0.590671 5:-34344889 MsG0580026301.01.T01:CDS
ATAAATAGTGGTGATGAAGA+AGG 0.594517 5:-34347303 MsG0580026301.01.T01:CDS
GCATGGAGCAGATGTGGATG+TGG 0.603022 5:-34342818 MsG0580026301.01.T01:CDS
GTGTTAGTATCATTCGAGCA+TGG 0.603535 5:+34342717 None:intergenic
TCTGCTGAGGTGATAAATAG+TGG 0.606346 5:-34347315 MsG0580026301.01.T01:CDS
ATGCTGGCAGCAGAATGAAT+CGG 0.606631 5:+34347273 None:intergenic
GTCCTGTGATGCATCTGCTG+AGG 0.610566 5:-34347328 MsG0580026301.01.T01:CDS
CAACATTAATATAAAGGACA+AGG 0.613454 5:-34345131 MsG0580026301.01.T01:intron
AGCTGCCCGATGCAACGGAG+TGG 0.615595 5:+34344963 None:intergenic
ACTATGCAGCCAGCAAAGGT+CGG 0.624620 5:-34345189 MsG0580026301.01.T01:CDS
CAAGTGGAGAGAAGAGAGAG+GGG 0.627474 5:+34342379 None:intergenic
TGCTATCTCACACTTATACG+TGG 0.627840 5:+34341532 None:intergenic
ATCTGAACCTGCAATGAATG+AGG 0.633383 5:-34341633 MsG0580026301.01.T01:three_prime_UTR
TGGGAATTCGGAGATTCTGG+AGG 0.634438 5:-34347250 MsG0580026301.01.T01:CDS
AATCAAAGTAAACATGAACA+TGG 0.634829 5:-34348137 MsG0580026301.01.T01:CDS
CTGAGAGTGACCAAAAGAAG+CGG 0.635993 5:+34347955 None:intergenic
TGGATGTGGAGGACAAGGAA+GGG 0.643078 5:-34342804 MsG0580026301.01.T01:CDS
TGGAGCAGATGTGGATGTGG+AGG 0.658645 5:-34342815 MsG0580026301.01.T01:CDS
ACACAAGAGAATGAGGAACA+AGG 0.684867 5:-34342698 MsG0580026301.01.T01:three_prime_UTR
AAGTGGAGAGAAGAGAGAGG+GGG 0.684883 5:+34342380 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAATTTAATTGCTTAT+AGG - Chr5:34347914-34347933 MsG0580026301.01.T01:intron 10.0%
!! AAATAATTTAATTGCTTATA+GGG - Chr5:34347915-34347934 MsG0580026301.01.T01:intron 10.0%
!! ATGTTAATATTAAAAACAAT+GGG - Chr5:34344467-34344486 MsG0580026301.01.T01:intron 10.0%
!!! AATAAATTAATTACAAGTTT+TGG - Chr5:34345441-34345460 MsG0580026301.01.T01:intron 10.0%
!!! ATCGTAAATTTTATATATAT+AGG - Chr5:34347193-34347212 MsG0580026301.01.T01:intron 10.0%
!!! CATAAAAATTTAATCTTTTT+TGG - Chr5:34341806-34341825 MsG0580026301.01.T01:intron 10.0%
!!! GTCTTATTTATAATTTTTTA+AGG - Chr5:34342743-34342762 MsG0580026301.01.T01:CDS 10.0%
!! AACATAAAAGCTTATTTATT+TGG - Chr5:34342010-34342029 MsG0580026301.01.T01:intron 15.0%
!! AATGTGATTATAATGAAAAT+GGG + Chr5:34344648-34344667 None:intergenic 15.0%
!! AATTATCAGTTGAAATTTAT+TGG + Chr5:34348113-34348132 None:intergenic 15.0%
!! AGTAAAAATAATATAATTGC+TGG + Chr5:34347993-34348012 None:intergenic 15.0%
!! ATAAAAATCTATTATGTGTT+TGG - Chr5:34346827-34346846 MsG0580026301.01.T01:intron 15.0%
!! ATAAACTTCTAATAGATTTA+GGG - Chr5:34342979-34342998 MsG0580026301.01.T01:intron 15.0%
!! GATGTTAATATTAAAAACAA+TGG - Chr5:34344466-34344485 MsG0580026301.01.T01:intron 15.0%
!! TAATGTGATTATAATGAAAA+TGG + Chr5:34344649-34344668 None:intergenic 15.0%
!! TATATATAGGAAAATGTTAA+CGG - Chr5:34347206-34347225 MsG0580026301.01.T01:intron 15.0%
!! TGTTAATATTAAAAACAATG+GGG - Chr5:34344468-34344487 MsG0580026301.01.T01:intron 15.0%
!!! AAAAAGAACATAATTTTACA+TGG + Chr5:34346267-34346286 None:intergenic 15.0%
!!! AAAAGAACATAATTTTACAT+GGG + Chr5:34346266-34346285 None:intergenic 15.0%
!!! ATTATATTATTTTTACTTGG+TGG - Chr5:34347996-34348015 MsG0580026301.01.T01:CDS 15.0%
!!! GCAATTATATTATTTTTACT+TGG - Chr5:34347993-34348012 MsG0580026301.01.T01:CDS 15.0%
!! AAAAACAGTTTATGAAGATA+TGG - Chr5:34342776-34342795 MsG0580026301.01.T01:CDS 20.0%
!! AATAAGGTAAAAATAGCTTA+TGG + Chr5:34343288-34343307 None:intergenic 20.0%
!! ATATCCTAACAGTAATAATT+TGG - Chr5:34344280-34344299 MsG0580026301.01.T01:intron 20.0%
!! ATGAAATAGTCAATTCATAT+AGG + Chr5:34343193-34343212 None:intergenic 20.0%
!! ATGTTAACGGTTAATTTATT+AGG - Chr5:34347219-34347238 MsG0580026301.01.T01:intron 20.0%
!! CATAAACTTCTAATAGATTT+AGG - Chr5:34342978-34342997 MsG0580026301.01.T01:intron 20.0%
!! GAAAACAAAATAATAGAAAC+TGG + Chr5:34346505-34346524 None:intergenic 20.0%
!! GAAATAAACATGAAACTTAA+AGG - Chr5:34347862-34347881 MsG0580026301.01.T01:intron 20.0%
!! GTTAATATTAAAAACAATGG+GGG - Chr5:34344469-34344488 MsG0580026301.01.T01:intron 20.0%
!! TAAATCCAATCATACTTTAA+AGG - Chr5:34347495-34347514 MsG0580026301.01.T01:intron 20.0%
!! TAATGCCAACATTAATATAA+AGG - Chr5:34344558-34344577 MsG0580026301.01.T01:intron 20.0%
!! TATATTAATGTTGGCATTAT+GGG + Chr5:34344557-34344576 None:intergenic 20.0%
!! TATCCTAACAGTAATAATTT+GGG - Chr5:34344281-34344300 MsG0580026301.01.T01:intron 20.0%
!! TTATATTAATGTTGGCATTA+TGG + Chr5:34344558-34344577 None:intergenic 20.0%
!!! AAGTTTTTAAGGTTTTAGAT+AGG + Chr5:34347769-34347788 None:intergenic 20.0%
!!! ACAAAAGTATGATAAGAAAT+AGG + Chr5:34345109-34345128 None:intergenic 20.0%
!!! ATAAGTCGTTTAAGTTTTTA+AGG + Chr5:34347780-34347799 None:intergenic 20.0%
!!! GACTTAATTTTATCTTATGT+TGG - Chr5:34342664-34342683 MsG0580026301.01.T01:three_prime_UTR 20.0%
!!! TAAGAGATTTAGAATCTATT+AGG - Chr5:34342512-34342531 MsG0580026301.01.T01:three_prime_UTR 20.0%
!!! TAATCGTATCAATTTTGTTT+TGG - Chr5:34346161-34346180 MsG0580026301.01.T01:intron 20.0%
!!! TCAACTTTTATTTTAAGTCA+CGG + Chr5:34345580-34345599 None:intergenic 20.0%
!!! TTCTGTTTTTTATAATGAGT+CGG - Chr5:34342210-34342229 MsG0580026301.01.T01:three_prime_UTR 20.0%
!!! TTTAAGATAATATAACAGTG+TGG + Chr5:34346360-34346379 None:intergenic 20.0%
! AAACAAACTCGAAACTTAAA+GGG + Chr5:34347822-34347803 None:intergenic 25.0%
! AAATATAATCATGAAGTGTG+TGG + Chr5:34343861-34343880 None:intergenic 25.0%
! AATATAATCATGAAGTGTGT+GGG + Chr5:34343860-34343879 None:intergenic 25.0%
! AATCAAAGTAAACATGAACA+TGG - Chr5:34341558-34341577 MsG0580026301.01.T01:three_prime_UTR 25.0%
! AATTTAACAGTCTCAATTCA+AGG + Chr5:34343482-34343501 None:intergenic 25.0%
! ATAATGTGAAGAAATAGTGT+TGG + Chr5:34345750-34345769 None:intergenic 25.0%
! CAACATTAATATAAAGGACA+AGG - Chr5:34344564-34344583 MsG0580026301.01.T01:intron 25.0%
! CAGAATTATATAATTTCCCT+TGG + Chr5:34346698-34346717 None:intergenic 25.0%
! CTAAAGATCTTATCGAAATA+AGG + Chr5:34343304-34343323 None:intergenic 25.0%
! CTTATTTCGATAAGATCTTT+AGG - Chr5:34343302-34343321 MsG0580026301.01.T01:intron 25.0%
! CTTGTCCTTTATATTAATGT+TGG + Chr5:34344566-34344585 None:intergenic 25.0%
! GAAACAAACTCAAAACTTAA+AGG - Chr5:34347742-34347761 MsG0580026301.01.T01:intron 25.0%
! GTTAAAAAGATTAAGCAAAC+AGG - Chr5:34345810-34345829 MsG0580026301.01.T01:intron 25.0%
! TAAAGTATGATTGGATTTAG+AGG + Chr5:34347494-34347513 None:intergenic 25.0%
! TAATGTGAAGAAATAGTGTT+GGG + Chr5:34345749-34345768 None:intergenic 25.0%
! TATAGAATAGTGGTATAGAA+TGG + Chr5:34344263-34344282 None:intergenic 25.0%
! TCAAAAGTAAAGACTCAATT+TGG + Chr5:34342296-34342315 None:intergenic 25.0%
! TGAATTGAGACTGTTAAATT+TGG - Chr5:34343482-34343501 MsG0580026301.01.T01:intron 25.0%
! TTCCAAAAGCTTAATATGAA+TGG + Chr5:34345482-34345501 None:intergenic 25.0%
! TTGAAACCTTAGAAACTTAA+AGG + Chr5:34347631-34347650 None:intergenic 25.0%
! TTGTAAACTGTAATATGATC+AGG - Chr5:34344703-34344722 MsG0580026301.01.T01:intron 25.0%
! TTGTATCAAAACCCTAAATT+GGG - Chr5:34341831-34341850 MsG0580026301.01.T01:intron 25.0%
! TTTCATTTGTGTTTATCTGT+TGG - Chr5:34343207-34343226 MsG0580026301.01.T01:intron 25.0%
! TTTCCCAAATTATTACTGTT+AGG + Chr5:34344287-34344306 None:intergenic 25.0%
! TTTGTATCAAAACCCTAAAT+TGG - Chr5:34341830-34341849 MsG0580026301.01.T01:intron 25.0%
!! AACCATTCATATTAAGCTTT+TGG - Chr5:34345477-34345496 MsG0580026301.01.T01:intron 25.0%
!! ACGTTCTTATTCTTCATTTT+TGG - Chr5:34344435-34344454 MsG0580026301.01.T01:intron 25.0%
!! ACTTATTCGAGTTTATCTAT+TGG - Chr5:34342539-34342558 MsG0580026301.01.T01:three_prime_UTR 25.0%
!! AGAGTTGATCAACTAAAAAA+TGG - Chr5:34347950-34347969 MsG0580026301.01.T01:intron 25.0%
!! AGCTTAGTATACTTTAACTT+TGG - Chr5:34346312-34346331 MsG0580026301.01.T01:intron 25.0%
!! ATAGATCCTTTAAGTTTCTA+GGG + Chr5:34347840-34347859 None:intergenic 25.0%
!! ATTTGTTTCCATTTTGAATG+AGG - Chr5:34346416-34346435 MsG0580026301.01.T01:intron 25.0%
!! CTAAGATGAGAAATATGTTT+TGG - Chr5:34346749-34346768 MsG0580026301.01.T01:intron 25.0%
!! CTAATCCAAGAAAATTGTTT+TGG - Chr5:34348020-34348039 MsG0580026301.01.T01:CDS 25.0%
!! GAATTCCAAAACAATTTTCT+TGG + Chr5:34348028-34348047 None:intergenic 25.0%
!! GCTTAGTATACTTTAACTTT+GGG - Chr5:34346313-34346332 MsG0580026301.01.T01:intron 25.0%
!! TAATAGATTTAGGGTATGTT+TGG - Chr5:34342988-34343007 MsG0580026301.01.T01:intron 25.0%
!! TATTGGAGTCTTCATAATTT+TGG - Chr5:34346781-34346800 MsG0580026301.01.T01:intron 25.0%
!! TTTAGATTTGTTTGAAGTTG+TGG - Chr5:34347439-34347458 MsG0580026301.01.T01:intron 25.0%
!! TTTGTTTCCATTTTGAATGA+GGG - Chr5:34346417-34346436 MsG0580026301.01.T01:intron 25.0%
!!! AACTTTTATTTTAAGTCACG+GGG + Chr5:34345578-34345597 None:intergenic 25.0%
!!! AAGTTTCTAAGGTTTCAAAT+AGG - Chr5:34347633-34347652 MsG0580026301.01.T01:intron 25.0%
!!! ACAGTTGATTTTTCAATCAA+TGG - Chr5:34345027-34345046 MsG0580026301.01.T01:intron 25.0%
!!! CAACTTTTATTTTAAGTCAC+GGG + Chr5:34345579-34345598 None:intergenic 25.0%
!!! CTGATAATTACTTGCTATAA+AGG - Chr5:34348124-34348143 MsG0580026301.01.T01:CDS 25.0%
!!! TACTTGCTATAAAGGAAAAA+AGG - Chr5:34348132-34348151 MsG0580026301.01.T01:CDS 25.0%
!!! TATTAAGCTTTTGGAATAGA+TGG - Chr5:34345486-34345505 MsG0580026301.01.T01:intron 25.0%
!!! TATTTTAAGAAAGGTACATG+TGG - Chr5:34343531-34343550 MsG0580026301.01.T01:intron 25.0%
!!! TCTGTTTTTTATAATGAGTC+GGG - Chr5:34342211-34342230 MsG0580026301.01.T01:three_prime_UTR 25.0%
!!! TCTTATTCTTCATTTTTGGT+AGG - Chr5:34344439-34344458 MsG0580026301.01.T01:intron 25.0%
!!! TGTGATTTGTTATAACAAAG+AGG - Chr5:34344850-34344869 MsG0580026301.01.T01:CDS 25.0%
!!! TGTGCTTTTTTATTGAAGTA+GGG - Chr5:34343375-34343394 MsG0580026301.01.T01:intron 25.0%
!!! TTGGGTATTATTTTTTGTGA+AGG - Chr5:34342240-34342259 MsG0580026301.01.T01:three_prime_UTR 25.0%
!!! TTGTCGTGTTTATGTTTTTA+TGG - Chr5:34343717-34343736 MsG0580026301.01.T01:intron 25.0%
!!! TTGTGCTTTTTTATTGAAGT+AGG - Chr5:34343374-34343393 MsG0580026301.01.T01:intron 25.0%
!!! TTTAAGTTTCGAGTTTGTTT+CGG - Chr5:34347599-34347618 MsG0580026301.01.T01:intron 25.0%
!!! TTTAAGTTTCGAGTTTGTTT+CGG + Chr5:34347618-34347599 None:intergenic 25.0%
AAAAAAGAGACAGATATGCA+AGG + Chr5:34347093-34347112 None:intergenic 30.0%
AAACACTTGTCAGATTGTTT+CGG - Chr5:34343233-34343252 MsG0580026301.01.T01:intron 30.0%
AAACTGTAATATGATCAGGT+TGG - Chr5:34344707-34344726 MsG0580026301.01.T01:intron 30.0%
AACCATTGATGGAACATTAA+CGG - Chr5:34344944-34344963 MsG0580026301.01.T01:CDS 30.0%
AACGGTTAATTTATTAGGCA+GGG - Chr5:34347224-34347243 MsG0580026301.01.T01:intron 30.0%
AACTTGTAAGACGTTATAGA+AGG - Chr5:34346567-34346586 MsG0580026301.01.T01:intron 30.0%
AAGTTCTCATGAAGAGTTTA+TGG + Chr5:34342609-34342628 None:intergenic 30.0%
AATGAAGAATAAGAACGTTC+AGG + Chr5:34344433-34344452 None:intergenic 30.0%
AATGGTCATACACATAAAAC+AGG + Chr5:34347035-34347054 None:intergenic 30.0%
ACTCCTAATTCAATAGACTA+AGG + Chr5:34342082-34342101 None:intergenic 30.0%
ACTGTTAGGATATAGAATAG+TGG + Chr5:34344273-34344292 None:intergenic 30.0%
AGAATGGTACTTAGTTAGTT+GGG + Chr5:34344193-34344212 None:intergenic 30.0%
CATAAACCATATACCTGAAA+AGG + Chr5:34345714-34345733 None:intergenic 30.0%
CATAGACATTTGTAACTGTT+AGG - Chr5:34343939-34343958 MsG0580026301.01.T01:intron 30.0%
CATTTGCAATGTAGAAATGA+AGG - Chr5:34343881-34343900 MsG0580026301.01.T01:intron 30.0%
CGATTAAAAAAGAAACCGAT+CGG + Chr5:34346147-34346166 None:intergenic 30.0%
CTAAAATAAGCCAATCCAAA+CGG + Chr5:34341878-34341897 None:intergenic 30.0%
CTCCTAATTCAATAGACTAA+GGG + Chr5:34342081-34342100 None:intergenic 30.0%
CTGAAACCTTAGAAACTTAA+AGG + Chr5:34347570-34347589 None:intergenic 30.0%
CTGAATACTAAACAGTATGA+TGG + Chr5:34346625-34346644 None:intergenic 30.0%
GAAACAAACTCGAAACTTAA+AGG - Chr5:34347802-34347821 MsG0580026301.01.T01:intron 30.0%
GAAACAAACTCGAAACTTAA+AGG + Chr5:34347821-34347802 None:intergenic 30.0%
GAATAAATCCTTCTCTTCTA+TGG + Chr5:34341611-34341630 None:intergenic 30.0%
GTTAAACACATGAAATCTCT+CGG - Chr5:34346104-34346123 MsG0580026301.01.T01:intron 30.0%
TAAAGATATGTCTGGAAGTA+GGG + Chr5:34343167-34343186 None:intergenic 30.0%
TAACGGTTAATTTATTAGGC+AGG - Chr5:34347223-34347242 MsG0580026301.01.T01:intron 30.0%
TACTTCCAGACATATCTTTA+GGG - Chr5:34343167-34343186 MsG0580026301.01.T01:intron 30.0%
TAGTTAGTTGAGGTTGTTAT+AGG + Chr5:34344145-34344164 None:intergenic 30.0%
TGTATCAAAACCCTAAATTG+GGG - Chr5:34341832-34341851 MsG0580026301.01.T01:intron 30.0%
TTAATCGCGACAAAAACTAA+TGG - Chr5:34342144-34342163 MsG0580026301.01.T01:intron 30.0%
TTAGGAGTGGAAACAAAATT+TGG - Chr5:34342094-34342113 MsG0580026301.01.T01:intron 30.0%
TTAGTCTATTGAATTAGGAG+TGG - Chr5:34342081-34342100 MsG0580026301.01.T01:intron 30.0%
TTCAAACAAATCTAAACCGT+TGG + Chr5:34347435-34347454 None:intergenic 30.0%
! AACTACTAAGCAGAACTTTT+AGG + Chr5:34346545-34346564 None:intergenic 30.0%
! AGTCGTTGACATTTTCAAAT+TGG - Chr5:34342173-34342192 MsG0580026301.01.T01:intron 30.0%
! ATAAATAGTGGTGATGAAGA+AGG - Chr5:34342392-34342411 MsG0580026301.01.T01:three_prime_UTR 30.0%
! ATAGGTCCTTTAAGTTTCTA+AGG - Chr5:34347561-34347580 MsG0580026301.01.T01:intron 30.0%
! CAGTAAACCTTTAAGAACTA+TGG + Chr5:34343809-34343828 None:intergenic 30.0%
! CTATTATGTGTTTGGTTTAC+AGG - Chr5:34346835-34346854 MsG0580026301.01.T01:intron 30.0%
! CTGAAGTGTTAGTGTTATAT+AGG - Chr5:34344387-34344406 MsG0580026301.01.T01:intron 30.0%
! GATAGATCCTTTAAGTTTCT+AGG + Chr5:34347841-34347860 None:intergenic 30.0%
! GTTGTTATAGTCTTACAGAA+TGG + Chr5:34344209-34344228 None:intergenic 30.0%
! TGAGATTTTGTTGAAGAAGT+AGG + Chr5:34347398-34347417 None:intergenic 30.0%
! TGTTCGTACAATTTTTACGT+AGG - Chr5:34344895-34344914 MsG0580026301.01.T01:CDS 30.0%
! TTAGCTAGTTTAGTTAGTTG+AGG + Chr5:34344155-34344174 None:intergenic 30.0%
! TTTTTGTGAAGGACTGAATT+TGG - Chr5:34342251-34342270 MsG0580026301.01.T01:three_prime_UTR 30.0%
!! AAGTTGAAGCTTTGTTTATC+AGG - Chr5:34342328-34342347 MsG0580026301.01.T01:three_prime_UTR 30.0%
!! AAGTTTCTAAGGTTTCAGAT+AGG - Chr5:34347572-34347591 MsG0580026301.01.T01:intron 30.0%
!! TGTGAACTTTTGATTGAAGA+AGG - Chr5:34344776-34344795 MsG0580026301.01.T01:intron 30.0%
!! TTTGGCCTTTAAAGTATGAT+TGG + Chr5:34347503-34347522 None:intergenic 30.0%
!!! ACAGATCAATTTTGGCTTAA+CGG - Chr5:34347696-34347715 MsG0580026301.01.T01:intron 30.0%
!!! CTTTTCAGGTATATGGTTTA+TGG - Chr5:34345712-34345731 MsG0580026301.01.T01:intron 30.0%
!!! GCTGGACTTTATTTTAAGAA+AGG - Chr5:34343522-34343541 MsG0580026301.01.T01:intron 30.0%
!!! GTTTCACGTTTGTTTTAGAT+AGG - Chr5:34347543-34347562 MsG0580026301.01.T01:intron 30.0%
!!! GTTTTGAGTTTGTTTCAGAT+AGG + Chr5:34347738-34347757 None:intergenic 30.0%
!!! TGTTTTGGTAGTTCTGTTAT+TGG - Chr5:34346764-34346783 MsG0580026301.01.T01:intron 30.0%
AAAATAAGCCCAAACCAAAC+GGG - Chr5:34342870-34342889 MsG0580026301.01.T01:intron 35.0%
AACATGAAACTTAAAGGACC+CGG - Chr5:34347868-34347887 MsG0580026301.01.T01:intron 35.0%
AAGAATAAGAACGTTCAGGA+TGG + Chr5:34344429-34344448 None:intergenic 35.0%
AATTGGTGCAAAACTGCATT+TGG + Chr5:34345897-34345916 None:intergenic 35.0%
ACAAGAAACCATAGAAGAGA+AGG - Chr5:34341600-34341619 MsG0580026301.01.T01:three_prime_UTR 35.0%
ACACTAACACTTCAGATTGA+AGG + Chr5:34344382-34344401 None:intergenic 35.0%
ACAGCATCCATAGTTCTTAA+AGG - Chr5:34343799-34343818 MsG0580026301.01.T01:intron 35.0%
AGTAGTAACTCTACTGTGAA+GGG + Chr5:34344088-34344107 None:intergenic 35.0%
ATAATGAGTCGGGACTAATT+TGG - Chr5:34342221-34342240 MsG0580026301.01.T01:three_prime_UTR 35.0%
ATACCTGAAAAGGTTTAGCT+CGG + Chr5:34345704-34345723 None:intergenic 35.0%
ATAGCTTATGGACATGTCAT+CGG + Chr5:34343276-34343295 None:intergenic 35.0%
ATTGGTGCAAAACTGCATTT+GGG + Chr5:34345896-34345915 None:intergenic 35.0%
ATTTAGTTGCACAGTGCTAA+GGG - Chr5:34345232-34345251 MsG0580026301.01.T01:CDS 35.0%
CAAAATAAGCCCAAACCAAA+CGG - Chr5:34342869-34342888 MsG0580026301.01.T01:intron 35.0%
CAGAATGGTACTTAGTTAGT+TGG + Chr5:34344194-34344213 None:intergenic 35.0%
CAGAGAATATAGCTTCTCTA+AGG + Chr5:34347367-34347386 None:intergenic 35.0%
CAGCATCACTCATCTAATTA+TGG + Chr5:34343575-34343594 None:intergenic 35.0%
CAGCTGTTCAATTAATCCAA+CGG - Chr5:34347416-34347435 MsG0580026301.01.T01:intron 35.0%
CTAAAGATATGTCTGGAAGT+AGG + Chr5:34343168-34343187 None:intergenic 35.0%
CTACTTCCAGACATATCTTT+AGG - Chr5:34343166-34343185 MsG0580026301.01.T01:intron 35.0%
CTATGTATTTGTGTCATGTC+AGG + Chr5:34343924-34343943 None:intergenic 35.0%
CTCTTTGTTAACACTTAGCA+TGG - Chr5:34345180-34345199 MsG0580026301.01.T01:CDS 35.0%
CTGAAACCCTAGAAACTTAA+AGG - Chr5:34347831-34347850 MsG0580026301.01.T01:intron 35.0%
GAATACTTGTGAGACTGTTT+GGG - Chr5:34342565-34342584 MsG0580026301.01.T01:three_prime_UTR 35.0%
GATACTAACACAAGAGAATG+AGG - Chr5:34346990-34347009 MsG0580026301.01.T01:intron 35.0%
GCATTCTTAACCAGTATTTG+AGG - Chr5:34347117-34347136 MsG0580026301.01.T01:intron 35.0%
GTATACTAAGCTGTTACAGA+TGG + Chr5:34346304-34346323 None:intergenic 35.0%
GTGACAATAACCTCAAATAC+TGG + Chr5:34347130-34347149 None:intergenic 35.0%
TAAGTGATGAGATGATGTGT+TGG + Chr5:34346472-34346491 None:intergenic 35.0%
TAATGAGTCGGGACTAATTT+GGG - Chr5:34342222-34342241 MsG0580026301.01.T01:three_prime_UTR 35.0%
TAATTGTACTGTGAGCTAAG+TGG - Chr5:34343436-34343455 MsG0580026301.01.T01:intron 35.0%
TAGAAGGTTGAAAATGCAGT+TGG - Chr5:34346583-34346602 MsG0580026301.01.T01:intron 35.0%
TAGCAAGGTGGAAATAAACT+AGG + Chr5:34345381-34345400 None:intergenic 35.0%
TATTTAGTTGCACAGTGCTA+AGG - Chr5:34345231-34345250 MsG0580026301.01.T01:CDS 35.0%
TGAATACTTGTGAGACTGTT+TGG - Chr5:34342564-34342583 MsG0580026301.01.T01:three_prime_UTR 35.0%
TGCCCTTAGTCTATTGAATT+AGG - Chr5:34342076-34342095 MsG0580026301.01.T01:intron 35.0%
TGTAGCATTACAACCATTGA+TGG - Chr5:34344933-34344952 MsG0580026301.01.T01:CDS 35.0%
TTAGGGTATGTTTGGATTGA+GGG - Chr5:34342996-34343015 MsG0580026301.01.T01:intron 35.0%
TTATTCAAAGCAGCAGAAGA+AGG - Chr5:34341625-34341644 MsG0580026301.01.T01:three_prime_UTR 35.0%
! AAAAGAAAGAGACCCTTTTG+AGG + Chr5:34341775-34341794 None:intergenic 35.0%
! AATTTTTCCATCGTTGTTGG+GGG - Chr5:34345913-34345932 MsG0580026301.01.T01:intron 35.0%
! ACCAATTTTTCCATCGTTGT+TGG - Chr5:34345910-34345929 MsG0580026301.01.T01:intron 35.0%
! ATCTTTTTAACGAGACGTTG+TGG + Chr5:34345801-34345820 None:intergenic 35.0%
! ATTTTGTTCCGAATGCAATC+TGG - Chr5:34346228-34346247 MsG0580026301.01.T01:intron 35.0%
! CAATTTTTCCATCGTTGTTG+GGG - Chr5:34345912-34345931 MsG0580026301.01.T01:intron 35.0%
! CATAATTTTACATGGGAGAC+TGG + Chr5:34346259-34346278 None:intergenic 35.0%
! CCAATTTTTCCATCGTTGTT+GGG - Chr5:34345911-34345930 MsG0580026301.01.T01:intron 35.0%
! GGTCTTTGACAATTTTCTCA+CGG - Chr5:34342115-34342134 MsG0580026301.01.T01:intron 35.0%
! GTTAACTTTAACTTAAGCGC+TGG - Chr5:34343504-34343523 MsG0580026301.01.T01:intron 35.0%
! TATGTTTGGATTGAGGGTTT+TGG - Chr5:34343002-34343021 MsG0580026301.01.T01:intron 35.0%
! TCCATTTTGAATGAGGGTAA+GGG - Chr5:34346423-34346442 MsG0580026301.01.T01:intron 35.0%
! TGCATTTGGGATTACTGAAA+GGG + Chr5:34345883-34345902 None:intergenic 35.0%
! TTCCATTTTGAATGAGGGTA+AGG - Chr5:34346422-34346441 MsG0580026301.01.T01:intron 35.0%
! TTGAGAGTTTAGGGTTCAAA+AGG - Chr5:34347336-34347355 MsG0580026301.01.T01:CDS 35.0%
! TTTAGGGTATGTTTGGATTG+AGG - Chr5:34342995-34343014 MsG0580026301.01.T01:intron 35.0%
!! AGCAGAACTTTTAGGTATAC+AGG + Chr5:34346537-34346556 None:intergenic 35.0%
!! CTTAACGGACAGATCAATTT+TGG - Chr5:34347688-34347707 MsG0580026301.01.T01:intron 35.0%
!! CTTAACGGAGGTTGATAAAA+AGG - Chr5:34347711-34347730 MsG0580026301.01.T01:intron 35.0%
!! GATCGTCATTTTGTTTAGCA+AGG + Chr5:34345396-34345415 None:intergenic 35.0%
!! GCAGAACTTTTAGGTATACA+GGG + Chr5:34346536-34346555 None:intergenic 35.0%
!! GTTTCTTAGAGAAAGTGCTT+TGG + Chr5:34341692-34341711 None:intergenic 35.0%
!! TTGAAGCTTTGTTTATCAGG+TGG - Chr5:34342331-34342350 MsG0580026301.01.T01:three_prime_UTR 35.0%
!! TTGTTTCGAGTTTGGCTTAA+CGG - Chr5:34347673-34347692 MsG0580026301.01.T01:intron 35.0%
!! TTTCGAGTTTGTTTCGAGTT+TGG - Chr5:34347665-34347684 MsG0580026301.01.T01:intron 35.0%
!!! AACTTTTAGTTTCAACACCG+AGG - Chr5:34346664-34346683 MsG0580026301.01.T01:intron 35.0%
!!! CTTTTTTTAGTCACTTGCAC+TGG - Chr5:34345294-34345313 MsG0580026301.01.T01:intron 35.0%
!!! GCTAAACCTTTTCAGGTATA+TGG - Chr5:34345705-34345724 MsG0580026301.01.T01:intron 35.0%
!!! GTCAGTTTTTTCCTAAGATG+TGG - Chr5:34346194-34346213 MsG0580026301.01.T01:intron 35.0%
AAATAAGCCCAAACCAAACG+GGG - Chr5:34342871-34342890 MsG0580026301.01.T01:intron 40.0%
AAGAGACAGATATGCAAGGT+TGG + Chr5:34347089-34347108 None:intergenic 40.0%
AAGCCATTGAATGCTCTCAA+TGG + Chr5:34347053-34347072 None:intergenic 40.0%
ACACAAGAGAATGAGGAACA+AGG - Chr5:34346997-34347016 MsG0580026301.01.T01:intron 40.0%
ACATGAAACTTAAAGGACCC+GGG - Chr5:34347869-34347888 MsG0580026301.01.T01:intron 40.0%
ACCCAGGGAATTGAATTCAA+AGG - Chr5:34343962-34343981 MsG0580026301.01.T01:intron 40.0%
ACCCTTACCCTCATTCAAAA+TGG + Chr5:34346427-34346446 None:intergenic 40.0%
ACGACAAAGACAATGCAACA+CGG + Chr5:34343704-34343723 None:intergenic 40.0%
ACGTGAAACTTAAAGAACCC+AGG + Chr5:34347532-34347551 None:intergenic 40.0%
ACTAACGATTTGACCATGAC+TGG + Chr5:34346068-34346087 None:intergenic 40.0%
ACTGAAAGGGGATACTAAAG+AGG + Chr5:34345870-34345889 None:intergenic 40.0%
AGAAGATGCTGCTAGACATT+AGG + Chr5:34343401-34343420 None:intergenic 40.0%
AGGAAGTAGAACCCCAATTT+AGG + Chr5:34341846-34341865 None:intergenic 40.0%
AGGTAGCACTCCTTCTTATA+AGG - Chr5:34346855-34346874 MsG0580026301.01.T01:intron 40.0%
AGGTGGAAATAAACTAGGAG+AGG + Chr5:34345376-34345395 None:intergenic 40.0%
ATAGGCCCTAAAGATATGTC+TGG + Chr5:34343175-34343194 None:intergenic 40.0%
ATCTGAACCTGCAATGAATG+AGG - Chr5:34348062-34348081 MsG0580026301.01.T01:CDS 40.0%
ATTGATGGAACATTAACGGC+AGG - Chr5:34344948-34344967 MsG0580026301.01.T01:CDS 40.0%
ATTTGGCCGAGAAAATTGTG+AGG - Chr5:34342268-34342287 MsG0580026301.01.T01:three_prime_UTR 40.0%
ATTTGTAACTGTTAGGACCC+AGG - Chr5:34343946-34343965 MsG0580026301.01.T01:intron 40.0%
CAAATCACAGCACTCATTAG+AGG + Chr5:34344839-34344858 None:intergenic 40.0%
CAACAAAGATTGAACTCTGC+AGG - Chr5:34347260-34347279 MsG0580026301.01.T01:CDS 40.0%
CAGGTACTCTTTCCTCAAAA+GGG - Chr5:34341760-34341779 MsG0580026301.01.T01:three_prime_UTR 40.0%
CCCAACAACGATGGAAAAAT+TGG + Chr5:34345914-34345933 None:intergenic 40.0%
CCCAGGGAATTGAATTCAAA+GGG - Chr5:34343963-34343982 MsG0580026301.01.T01:intron 40.0%
CCCTTTGAATTCAATTCCCT+GGG + Chr5:34343966-34343985 None:intergenic 40.0%
CGTGAAACTTAAAGAACCCA+GGG + Chr5:34347531-34347550 None:intergenic 40.0%
CTCTTAGAACTTAGAAGCCT+GGG - Chr5:34345833-34345852 MsG0580026301.01.T01:intron 40.0%
CTGAAAGGGGATACTAAAGA+GGG + Chr5:34345869-34345888 None:intergenic 40.0%
GAAAGAAATCTCTCCTCCAA+GGG - Chr5:34344058-34344077 MsG0580026301.01.T01:intron 40.0%
GACAATGCAACACGGAAATA+TGG + Chr5:34343696-34343715 None:intergenic 40.0%
GAGTAGTAACTCTACTGTGA+AGG + Chr5:34344089-34344108 None:intergenic 40.0%
GATACTAAAGAGGGATGAAC+TGG + Chr5:34345860-34345879 None:intergenic 40.0%
GGAAGTAGAACCCCAATTTA+GGG + Chr5:34341845-34341864 None:intergenic 40.0%
GGAATAGATGGTTCATGACA+TGG - Chr5:34345498-34345517 MsG0580026301.01.T01:intron 40.0%
GGGTTCTACTTCCTAGTTAA+GGG - Chr5:34341852-34341871 MsG0580026301.01.T01:intron 40.0%
GTAGAAATGAAGGACTGACA+TGG - Chr5:34343891-34343910 MsG0580026301.01.T01:intron 40.0%
GTAGTAACTCTACTGTGAAG+GGG + Chr5:34344087-34344106 None:intergenic 40.0%
GTATAAACTATGACCCCGTT+TGG + Chr5:34342887-34342906 None:intergenic 40.0%
GTATTGAACTCAAGACCACT+AGG + Chr5:34345541-34345560 None:intergenic 40.0%
GTGTTAGTATCATTCGAGCA+TGG + Chr5:34346981-34347000 None:intergenic 40.0%
TCAGGTACTCTTTCCTCAAA+AGG - Chr5:34341759-34341778 MsG0580026301.01.T01:three_prime_UTR 40.0%
TCATTGCAGGTTCAGATACA+AGG + Chr5:34348059-34348078 None:intergenic 40.0%
TCCCTTTGAATTCAATTCCC+TGG + Chr5:34343967-34343986 None:intergenic 40.0%
TCTCTCCACTTGAGAGTTTA+GGG - Chr5:34347327-34347346 MsG0580026301.01.T01:CDS 40.0%
TCTGCTGAGGTGATAAATAG+TGG - Chr5:34342380-34342399 MsG0580026301.01.T01:three_prime_UTR 40.0%
TGCCGTTAATGTTCCATCAA+TGG + Chr5:34344949-34344968 None:intergenic 40.0%
TGTTGGACATTGACACATGT+CGG - Chr5:34344351-34344370 MsG0580026301.01.T01:intron 40.0%
TTCAGAGGACAATGATTCGA+AGG + Chr5:34341662-34341681 None:intergenic 40.0%
TTCTCTCCACTTGAGAGTTT+AGG - Chr5:34347326-34347345 MsG0580026301.01.T01:CDS 40.0%
TTGAACCCTAAACTCTCAAG+TGG + Chr5:34347335-34347354 None:intergenic 40.0%
TTGATGGAACATTAACGGCA+GGG - Chr5:34344949-34344968 MsG0580026301.01.T01:CDS 40.0%
TTTGGCCGAGAAAATTGTGA+GGG - Chr5:34342269-34342288 MsG0580026301.01.T01:three_prime_UTR 40.0%
TTTGTAACTGTTAGGACCCA+GGG - Chr5:34343947-34343966 MsG0580026301.01.T01:intron 40.0%
! AGAGTTTAGGGTTCAAAAGG+AGG - Chr5:34347339-34347358 MsG0580026301.01.T01:CDS 40.0%
! ATAGTGGTGATGAAGAAGGT+TGG - Chr5:34342396-34342415 MsG0580026301.01.T01:three_prime_UTR 40.0%
! CAATAGACTAAGGGCATGTT+TGG + Chr5:34342072-34342091 None:intergenic 40.0%
! CTGCATTTGGGATTACTGAA+AGG + Chr5:34345884-34345903 None:intergenic 40.0%
! GCATTTGGGATTACTGAAAG+GGG + Chr5:34345882-34345901 None:intergenic 40.0%
! GTTAGTTTGAGTCAGCAATC+AGG - Chr5:34346082-34346101 MsG0580026301.01.T01:intron 40.0%
! TAGTGGTGATGAAGAAGGTT+GGG - Chr5:34342397-34342416 MsG0580026301.01.T01:three_prime_UTR 40.0%
! TATGTCTGGAAGTAGGGTTT+TGG + Chr5:34343161-34343180 None:intergenic 40.0%
! TGAGGAACAAGGTTTTGCTT+AGG - Chr5:34347008-34347027 MsG0580026301.01.T01:intron 40.0%
! TTGCTGGTTACTACAACAGT+TGG + Chr5:34347977-34347996 None:intergenic 40.0%
! TTGGTCCCTCACAATTTTCT+CGG + Chr5:34342277-34342296 None:intergenic 40.0%
! TTTTGAATGAGGGTAAGGGT+AGG - Chr5:34346427-34346446 MsG0580026301.01.T01:intron 40.0%
!! CGTCATTTTGTTTAGCAAGG+TGG + Chr5:34345393-34345412 None:intergenic 40.0%
!! GTTTCGAGTTTGTTTCGGAT+AGG - Chr5:34347604-34347623 MsG0580026301.01.T01:intron 40.0%
!! TGACCATTGAGAGCATTCAA+TGG - Chr5:34347047-34347066 MsG0580026301.01.T01:intron 40.0%
!!! GATCAATTTTGGCTTAACGG+AGG - Chr5:34347699-34347718 MsG0580026301.01.T01:intron 40.0%
!!! TTTGGATTGAGGGTTTTGGA+GGG - Chr5:34343006-34343025 MsG0580026301.01.T01:intron 40.0%
AAACCGATCGGCTAGAACAT+GGG + Chr5:34346135-34346154 None:intergenic 45.0%
AAACTGCACTTTCCCCTCAA+AGG - Chr5:34345055-34345074 MsG0580026301.01.T01:intron 45.0%
AACTATGACCCCGTTTGGTT+TGG + Chr5:34342882-34342901 None:intergenic 45.0%
AATCCAAACGGCCCTTAACT+AGG + Chr5:34341866-34341885 None:intergenic 45.0%
AATCTCCGAATTCCCAATGC+TGG + Chr5:34342441-34342460 None:intergenic 45.0%
AATCTTCATCCGACCTTTGC+TGG + Chr5:34344518-34344537 None:intergenic 45.0%
AATGAGCAGTACGCCTTTGA+GGG + Chr5:34345071-34345090 None:intergenic 45.0%
ATGCTGGCAGCAGAATGAAT+CGG + Chr5:34342425-34342444 None:intergenic 45.0%
ATTCATTCTGCTGCCAGCAT+TGG - Chr5:34342425-34342444 MsG0580026301.01.T01:three_prime_UTR 45.0%
ATTGCGGAATTTCAGAGTGG+CGG - Chr5:34345995-34346014 MsG0580026301.01.T01:intron 45.0%
CACAAGTGTCAGTGTCATGT+CGG - Chr5:34344328-34344347 MsG0580026301.01.T01:intron 45.0%
CAGCACTCATTAGAGGAGTT+TGG + Chr5:34344832-34344851 None:intergenic 45.0%
CATGAAACTTAAAGGACCCG+GGG - Chr5:34347870-34347889 MsG0580026301.01.T01:intron 45.0%
CATTGGGAATTCGGAGATTC+TGG - Chr5:34342442-34342461 MsG0580026301.01.T01:three_prime_UTR 45.0%
CTGAGAGTGACCAAAAGAAG+CGG + Chr5:34341743-34341762 None:intergenic 45.0%
CTGCTCCATGCCTTATAAGA+AGG + Chr5:34346868-34346887 None:intergenic 45.0%
CTGTGAGCTAAGTGGATAAG+TGG - Chr5:34343444-34343463 MsG0580026301.01.T01:intron 45.0%
GAAACTTAAAGAACCCAGGG+AGG + Chr5:34347528-34347547 None:intergenic 45.0%
GAGAGAGAGAGAGAGAGAAT+AGG - Chr5:34344036-34344055 MsG0580026301.01.T01:intron 45.0%
GCACTCCTTCTTATAAGGCA+TGG - Chr5:34346860-34346879 MsG0580026301.01.T01:intron 45.0%
GCTCTTAGAACTTAGAAGCC+TGG - Chr5:34345832-34345851 MsG0580026301.01.T01:intron 45.0%
GGAAAGAAATCTCTCCTCCA+AGG - Chr5:34344057-34344076 MsG0580026301.01.T01:intron 45.0%
GGGGTTCTACTTCCTAGTTA+AGG - Chr5:34341851-34341870 MsG0580026301.01.T01:intron 45.0%
GTATCATTCGAGCATGGTCT+TGG + Chr5:34346975-34346994 None:intergenic 45.0%
TAAAGGCCAAATACCTCCCT+GGG - Chr5:34347512-34347531 MsG0580026301.01.T01:intron 45.0%
TAATGAGCAGTACGCCTTTG+AGG + Chr5:34345072-34345091 None:intergenic 45.0%
TAGTTAAGGGCCGTTTGGAT+TGG - Chr5:34341865-34341884 MsG0580026301.01.T01:intron 45.0%
TATAAGGCATGGAGCAGATG+TGG - Chr5:34346871-34346890 MsG0580026301.01.T01:intron 45.0%
TCAAGTGGAGAGAAGAGAGA+GGG + Chr5:34347320-34347339 None:intergenic 45.0%
TCATCTGCCTCATTCATTGC+AGG + Chr5:34348072-34348091 None:intergenic 45.0%
TCGAGTGCATACCACATCTT+AGG + Chr5:34346208-34346227 None:intergenic 45.0%
TTAAAGGCCAAATACCTCCC+TGG - Chr5:34347511-34347530 MsG0580026301.01.T01:intron 45.0%
TTACACTATGCAGCCAGCAA+AGG - Chr5:34344502-34344521 MsG0580026301.01.T01:intron 45.0%
TTAGGTATACAGGGAGAACG+AGG + Chr5:34346527-34346546 None:intergenic 45.0%
TTCATTCTGCTGCCAGCATT+GGG - Chr5:34342426-34342445 MsG0580026301.01.T01:three_prime_UTR 45.0%
! AAAGGCGTACTGCTCATTAG+TGG - Chr5:34345073-34345092 MsG0580026301.01.T01:intron 45.0%
! ACTATGACCCCGTTTGGTTT+GGG + Chr5:34342881-34342900 None:intergenic 45.0%
! ATTTTACATGGGAGACTGGC+CGG + Chr5:34346255-34346274 None:intergenic 45.0%
! GACAGATATGCAAGGTTGGT+AGG + Chr5:34347085-34347104 None:intergenic 45.0%
! GCTCGGTGAAGACATATGTA+TGG + Chr5:34345687-34345706 None:intergenic 45.0%
! GTTGATGCTGTTGATAGAGC+TGG - Chr5:34344806-34344825 MsG0580026301.01.T01:intron 45.0%
! TCACCGAGCTAAACCTTTTC+AGG - Chr5:34345698-34345717 MsG0580026301.01.T01:intron 45.0%
! TTTGCTGGCTGCATAGTGTA+AGG + Chr5:34344503-34344522 None:intergenic 45.0%
!! AAAGAACCCAGGGAGGTATT+TGG + Chr5:34347521-34347540 None:intergenic 45.0%
!! CTGGAGGCTTTGTTGAACAA+AGG - Chr5:34342461-34342480 MsG0580026301.01.T01:three_prime_UTR 45.0%
!! CTTCATGTTGCCGCTTCTTT+TGG - Chr5:34341730-34341749 MsG0580026301.01.T01:three_prime_UTR 45.0%
!! GTTTGGATTGAGGGTTTTGG+AGG - Chr5:34343005-34343024 MsG0580026301.01.T01:intron 45.0%
!! TGCTTTGGAGAGTGATTCAG+AGG + Chr5:34341677-34341696 None:intergenic 45.0%
!!! TCTGGAAGTAGGGTTTTGGA+GGG + Chr5:34343157-34343176 None:intergenic 45.0%
!!! TTGGATTGAGGGTTTTGGAG+GGG - Chr5:34343007-34343026 MsG0580026301.01.T01:intron 45.0%
!!! TATTATTTATAAATTTGTTA+AGG - Chr5:34341926-34341945 MsG0580026301.01.T01:intron 5.0%
!!! TTAAATTATTTTTTTAAAGT+AGG + Chr5:34347906-34347925 None:intergenic 5.0%
AACCGATCGGCTAGAACATG+GGG + Chr5:34346134-34346153 None:intergenic 50.0%
AAGTAGGCCAAATACCTCCC+CGG + Chr5:34347890-34347909 None:intergenic 50.0%
AAGTGGAGAGAAGAGAGAGG+GGG + Chr5:34347318-34347337 None:intergenic 50.0%
ACTATGCAGCCAGCAAAGGT+CGG - Chr5:34344506-34344525 MsG0580026301.01.T01:intron 50.0%
AGATGTGGATGTGGAGGACA+AGG - Chr5:34346886-34346905 MsG0580026301.01.T01:intron 50.0%
AGTGGCGTGATCGACAACAT+AGG + Chr5:34345965-34345984 None:intergenic 50.0%
AGTTTCAACACCGAGGTGCA+AGG - Chr5:34346671-34346690 MsG0580026301.01.T01:intron 50.0%
ATGAGCAGTACGCCTTTGAG+GGG + Chr5:34345070-34345089 None:intergenic 50.0%
CAAGTGGAGAGAAGAGAGAG+GGG + Chr5:34347319-34347338 None:intergenic 50.0%
CTCAAGTGGAGAGAAGAGAG+AGG + Chr5:34347321-34347340 None:intergenic 50.0%
CTTCCTAGTTAAGGGCCGTT+TGG - Chr5:34341860-34341879 MsG0580026301.01.T01:intron 50.0%
CTTGTGAGACTGTTTGGGAG+AGG - Chr5:34342570-34342589 MsG0580026301.01.T01:three_prime_UTR 50.0%
GAAACCGATCGGCTAGAACA+TGG + Chr5:34346136-34346155 None:intergenic 50.0%
GCGATTGCGGAATTTCAGAG+TGG - Chr5:34345992-34346011 MsG0580026301.01.T01:intron 50.0%
GTTTCAACACCGAGGTGCAA+GGG - Chr5:34346672-34346691 MsG0580026301.01.T01:intron 50.0%
TACTGTGAAGGGGAAACCCT+TGG + Chr5:34344077-34344096 None:intergenic 50.0%
TCCGCAATCGCATGCTAAAG+TGG + Chr5:34345983-34346002 None:intergenic 50.0%
TGCGTTTGTGCTCCATGCTT+CGG - Chr5:34345619-34345638 MsG0580026301.01.T01:intron 50.0%
TGGATGTGGAGGACAAGGAA+GGG - Chr5:34346891-34346910 MsG0580026301.01.T01:intron 50.0%
TGGGAATTCGGAGATTCTGG+AGG - Chr5:34342445-34342464 MsG0580026301.01.T01:three_prime_UTR 50.0%
TGTCAGTGTCATGTCGGTGT+TGG - Chr5:34344334-34344353 MsG0580026301.01.T01:intron 50.0%
TTGGTTCCACTCCGTTGCAT+CGG - Chr5:34344726-34344745 MsG0580026301.01.T01:intron 50.0%
! AAGGAAGGGTACACAGTGCT+TGG - Chr5:34346905-34346924 MsG0580026301.01.T01:intron 50.0%
! CGCTTCTTTTGGTCACTCTC+AGG - Chr5:34341741-34341760 MsG0580026301.01.T01:three_prime_UTR 50.0%
! GCCACTTTAGCATGCGATTG+CGG - Chr5:34345979-34345998 MsG0580026301.01.T01:intron 50.0%
! TGCTGCCAGCATTGGGAATT+CGG - Chr5:34342433-34342452 MsG0580026301.01.T01:three_prime_UTR 50.0%
!! GTCTGGAAGTAGGGTTTTGG+AGG + Chr5:34343158-34343177 None:intergenic 50.0%
!! TTTTAAGTCACGGGGCAGCA+AGG + Chr5:34345570-34345589 None:intergenic 50.0%
!! TTTTACATGGGAGACTGGCC+GGG + Chr5:34346254-34346273 None:intergenic 50.0%
!!! ATTGAGGGTTTTGGAGGGGA+GGG - Chr5:34343011-34343030 MsG0580026301.01.T01:intron 50.0%
AAGAGGGATGAACTGGTCCC+AGG + Chr5:34345853-34345872 None:intergenic 55.0%
ACCCCCATGTTCTAGCCGAT+CGG - Chr5:34346129-34346148 MsG0580026301.01.T01:intron 55.0%
ACCGATCGGCTAGAACATGG+GGG + Chr5:34346133-34346152 None:intergenic 55.0%
AGTAGGCCAAATACCTCCCC+GGG + Chr5:34347889-34347908 None:intergenic 55.0%
CACCTCAGCAGATGCATCAC+AGG + Chr5:34342372-34342391 None:intergenic 55.0%
GAAACTTAAAGGACCCGGGG+AGG - Chr5:34347873-34347892 MsG0580026301.01.T01:intron 55.0%
GAGAGGGGGAGACACATGTT+AGG + Chr5:34347304-34347323 None:intergenic 55.0%
GCAGACCTACTCATCAGTCG+AGG - Chr5:34345935-34345954 MsG0580026301.01.T01:intron 55.0%
GCATGGAGCAGATGTGGATG+TGG - Chr5:34346877-34346896 MsG0580026301.01.T01:intron 55.0%
GCGTTTGTGCTCCATGCTTC+GGG - Chr5:34345620-34345639 MsG0580026301.01.T01:intron 55.0%
GTCCTGTGATGCATCTGCTG+AGG - Chr5:34342367-34342386 MsG0580026301.01.T01:three_prime_UTR 55.0%
GTGGATGTGGAGGACAAGGA+AGG - Chr5:34346890-34346909 MsG0580026301.01.T01:intron 55.0%
GTTCCGAATGCAATCTGGCC+CGG - Chr5:34346233-34346252 MsG0580026301.01.T01:intron 55.0%
TGGAGCAGATGTGGATGTGG+AGG - Chr5:34346880-34346899 MsG0580026301.01.T01:intron 55.0%
TGGTTCCACTCCGTTGCATC+GGG - Chr5:34344727-34344746 MsG0580026301.01.T01:intron 55.0%
TGTGAAGGGGAAACCCTTGG+AGG + Chr5:34344074-34344093 None:intergenic 55.0%
!! AAAGGACCCGGGGAGGTATT+TGG - Chr5:34347880-34347899 MsG0580026301.01.T01:intron 55.0%
!!! GATTGAGGGTTTTGGAGGGG+AGG - Chr5:34343010-34343029 MsG0580026301.01.T01:intron 55.0%
ACTGGCATGCCTCCTGAGTG+CGG + Chr5:34346050-34346069 None:intergenic 60.0%
AGGTCTGCCCCCAACAACGA+TGG + Chr5:34345923-34345942 None:intergenic 60.0%
CTCCACACACACCCGAAGCA+TGG + Chr5:34345634-34345653 None:intergenic 60.0%
CTCCATGCTTCGGGTGTGTG+TGG - Chr5:34345629-34345648 MsG0580026301.01.T01:intron 60.0%
GCGCACCTCGACTGATGAGT+AGG + Chr5:34345943-34345962 None:intergenic 60.0%
GGCATCCTCTGCGACGAGTT+CGG - Chr5:34346016-34346035 MsG0580026301.01.T01:intron 60.0%
GTGCTAGCTGCCCGATGCAA+CGG + Chr5:34344740-34344759 None:intergenic 60.0%
TGCATCGGGCAGCTAGCACT+GGG - Chr5:34344741-34344760 MsG0580026301.01.T01:intron 60.0%
TGGCCGGGCCAGATTGCATT+CGG + Chr5:34346239-34346258 None:intergenic 60.0%
TTCCCTTGGCCCTTGCACCT+CGG + Chr5:34346684-34346703 None:intergenic 60.0%
TTGCATCGGGCAGCTAGCAC+TGG - Chr5:34344740-34344759 MsG0580026301.01.T01:intron 60.0%
! CTCAGGAGGCATGCCAGTCA+TGG - Chr5:34346052-34346071 MsG0580026301.01.T01:intron 60.0%
ACACCGAGGTGCAAGGGCCA+AGG - Chr5:34346678-34346697 MsG0580026301.01.T01:intron 65.0%
AGCTGCCCGATGCAACGGAG+TGG + Chr5:34344735-34344754 None:intergenic 65.0%
CACCGAGGTGCAAGGGCCAA+GGG - Chr5:34346679-34346698 MsG0580026301.01.T01:intron 65.0%
GCCTCCTGAGTGCGGCTCGT+CGG + Chr5:34346042-34346061 None:intergenic 70.0%
GTCGGCCGAACTCGTCGCAG+AGG + Chr5:34346024-34346043 None:intergenic 70.0%
GCCGACGAGCCGCACTCAGG+AGG - Chr5:34346038-34346057 MsG0580026301.01.T01:intron 75.0%
TCGGCCGACGAGCCGCACTC+AGG - Chr5:34346035-34346054 MsG0580026301.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 34341538 34348179 34341538 ID=MsG0580026301.01;Name=MsG0580026301.01
Chr5 mRNA 34341538 34348179 34341538 ID=MsG0580026301.01.T01;Parent=MsG0580026301.01;Name=MsG0580026301.01.T01;_AED=0.41;_eAED=0.41;_QI=0|1|1|1|0.8|0.66|6|790|254
Chr5 exon 34341538 34341803 34341538 ID=MsG0580026301.01.T01:exon:25464;Parent=MsG0580026301.01.T01
Chr5 exon 34342202 34342860 34342202 ID=MsG0580026301.01.T01:exon:25463;Parent=MsG0580026301.01.T01
Chr5 exon 34344846 34344992 34344846 ID=MsG0580026301.01.T01:exon:25462;Parent=MsG0580026301.01.T01
Chr5 exon 34345132 34345256 34345132 ID=MsG0580026301.01.T01:exon:25461;Parent=MsG0580026301.01.T01
Chr5 exon 34347235 34347367 34347235 ID=MsG0580026301.01.T01:exon:25460;Parent=MsG0580026301.01.T01
Chr5 exon 34347955 34348179 34347955 ID=MsG0580026301.01.T01:exon:25459;Parent=MsG0580026301.01.T01
Chr5 CDS 34347955 34348179 34347955 ID=MsG0580026301.01.T01:cds;Parent=MsG0580026301.01.T01
Chr5 CDS 34347235 34347367 34347235 ID=MsG0580026301.01.T01:cds;Parent=MsG0580026301.01.T01
Chr5 CDS 34345132 34345256 34345132 ID=MsG0580026301.01.T01:cds;Parent=MsG0580026301.01.T01
Chr5 CDS 34344846 34344992 34344846 ID=MsG0580026301.01.T01:cds;Parent=MsG0580026301.01.T01
Chr5 CDS 34342726 34342860 34342726 ID=MsG0580026301.01.T01:cds;Parent=MsG0580026301.01.T01
Chr5 three_prime_UTR 34342202 34342725 34342202 ID=MsG0580026301.01.T01:three_prime_utr;Parent=MsG0580026301.01.T01
Chr5 three_prime_UTR 34341538 34341803 34341538 ID=MsG0580026301.01.T01:three_prime_utr;Parent=MsG0580026301.01.T01
Gene Sequence

>MsG0580026301.01.T01

TTGGTTCAAATTCAAATCAAAATCAAAGTAAACATGAACATGGAAGTAGACACTGAGAACAAACAAGAAACCATAGAAGAGAAGGATTTATTCAAAGCAGCAGAAGAAGGAGATTCTTCAACCTTCGAATCATTGTCCTCTGAATCACTCTCCAAAGCACTTTCTCTAAGAAACGAAGACGATCGTTCTCTTCTTCATGTTGCCGCTTCTTTTGGTCACTCTCAGGTGGTGAAGATATTGTTGTCCTGTGATGCATCTGCTGAGGTGATAAATAGTGGTGATGAAGAAGGTTGGGCACCGATTCATTCTGCTGCCAGCATTGGGAATTCGGAGATTCTGGAGGCTTTGTTGAACAAAGGAGCTGATGTTAATATTAAAAACAATGGGGGACGCACTGCCTTACACTATGCAGCCAGCAAAGGTCGGATGAAGATTGCTGAAATACTCATCTCCCATAATGCCAACATTAATATAAAGGACAAGGTTGGTTCCACTCCGTTGCATCGGGCAGCTAGCACTGGGAATTCTGAGTTGTGTGAACTTTTGATTGAAGAAGGAGCAGATGTTGATGCTGTTGATAGAGCTGGCCAAACTCCTCTAATGAGTGCTGTGATTTGTTATAACAAAGAGGTAGCACTCCTTCTTATAAGGCATGGAGCAGATGTGGATGTGGAGGACAAGGAAGGGTACACAGTGCTTGGTCGAATTACTGATGATGAGTTTAGATCAATATTGATTGATGCTGCCAAGACCATGCTCGAATGA

Protein sequence

>MsG0580026301.01.T01

LVQIQIKIKVNMNMEVDTENKQETIEEKDLFKAAEEGDSSTFESLSSESLSKALSLRNEDDRSLLHVAASFGHSQVVKILLSCDASAEVINSGDEEGWAPIHSAASIGNSEILEALLNKGADVNIKNNGGRTALHYAASKGRMKIAEILISHNANINIKDKVGSTPLHRAASTGNSELCELLIEEGADVDAVDRAGQTPLMSAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRITDDEFRSILIDAAKTMLE*