Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000040 | sp|F4JCN9|PRE4_ARATH | 73.118 | 93 | 23 | 2 | 1 | 92 | 1 | 92 | 2.72e-38 | 125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0000040 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000040 | Msa0449480 | 0.801284 | 9.684249e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000040 | MtrunA17_Chr3g0093001 | 100.000 | 92 | 0 | 0 | 1 | 92 | 1 | 92 | 2.70e-60 | 178 |
| Msa0000040 | MtrunA17_Chr7g0217141 | 72.340 | 94 | 23 | 2 | 1 | 92 | 1 | 93 | 7.13e-38 | 122 |
| Msa0000040 | MtrunA17_Chr5g0416431 | 72.727 | 77 | 19 | 1 | 17 | 91 | 17 | 93 | 2.10e-33 | 110 |
| Msa0000040 | MtrunA17_Chr6g0453041 | 73.077 | 78 | 19 | 1 | 17 | 92 | 15 | 92 | 1.25e-32 | 108 |
| Msa0000040 | MtrunA17_Chr8g0362131 | 66.667 | 84 | 25 | 2 | 10 | 91 | 10 | 92 | 2.86e-31 | 105 |
| Msa0000040 | MtrunA17_Chr7g0237771 | 48.611 | 72 | 37 | 0 | 8 | 79 | 3 | 74 | 2.30e-11 | 54.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000040 | AT3G47710.1 | 73.118 | 93 | 23 | 2 | 1 | 92 | 1 | 92 | 2.77e-39 | 125 |
| Msa0000040 | AT1G74500.1 | 77.922 | 77 | 16 | 1 | 17 | 92 | 17 | 93 | 9.83e-36 | 117 |
| Msa0000040 | AT1G26945.1 | 79.730 | 74 | 13 | 1 | 19 | 90 | 19 | 92 | 1.55e-34 | 114 |
| Msa0000040 | AT3G28857.1 | 65.957 | 94 | 27 | 3 | 1 | 91 | 1 | 92 | 1.51e-32 | 108 |
| Msa0000040 | AT5G39860.1 | 69.231 | 78 | 21 | 2 | 17 | 91 | 15 | 92 | 1.01e-29 | 102 |
| Msa0000040 | AT5G15160.1 | 66.667 | 75 | 22 | 2 | 19 | 90 | 18 | 92 | 2.58e-27 | 95.9 |
Find 17 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGCTTCAAGGGTGTTGC+AGG | 0.328305 | 1_1:+669978 | Msa0000040:CDS |
| TGAGCGTTTGTCTGAGCTAT+TGG | 0.392203 | 1_1:+670050 | Msa0000040:CDS |
| TATATCAGGTTTCAGCTTCA+AGG | 0.403696 | 1_1:+669968 | Msa0000040:intron |
| ACTATATTAGAAACTTGAAC+AGG | 0.414262 | 1_1:+670010 | Msa0000040:CDS |
| GAGCTCCTATTGCGAATCTC+AGG | 0.466230 | 1_1:-669103 | None:intergenic |
| TTCTTCCTGAGATTCGCAAT+AGG | 0.484861 | 1_1:+669098 | Msa0000040:CDS |
| AGGAAGAAGTTGCTGCAGCT+TGG | 0.493730 | 1_1:-669083 | None:intergenic |
| ATATCAGGTTTCAGCTTCAA+GGG | 0.502020 | 1_1:+669969 | Msa0000040:intron |
| CTAGCAGGAGGTCGCGGTCA+CGG | 0.548676 | 1_1:+669008 | Msa0000040:CDS |
| GCTCAGACAAACGCTCACTT+AGG | 0.559789 | 1_1:-670044 | None:intergenic |
| GCAGCTTGGAGACAAGATCA+TGG | 0.563717 | 1_1:-669069 | None:intergenic |
| AGATGTCTAGCAGGAGGTCG+CGG | 0.564343 | 1_1:+669002 | None:intergenic |
| TCGCAATAGGAGCTCTGACA+AGG | 0.593557 | 1_1:+669111 | Msa0000040:CDS |
| AAGATCATGGATCTGATCGT+CGG | 0.643584 | 1_1:-669056 | None:intergenic |
| TTATAAAGATGTCTAGCAGG+AGG | 0.648667 | 1_1:+668996 | None:intergenic |
| CTATATTAGAAACTTGAACA+GGG | 0.660572 | 1_1:+670011 | Msa0000040:CDS |
| CACGGCAAACAAGTAGCTCG+AGG | 0.663330 | 1_1:+669026 | Msa0000040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGACTTTTATAAAAAATAA+TGG | - | chr1_1:669264-669283 | None:intergenic | 10.0% |
| !!! | TTATTTTTTATAAAAGTCAT+TGG | + | chr1_1:669264-669283 | Msa0000040:intron | 10.0% |
| !! | TGTATTAAAAATATAGTATA+TGG | - | chr1_1:669358-669377 | None:intergenic | 10.0% |
| !!! | AAGTTTTTTTTTTTTTTTCT+TGG | - | chr1_1:669677-669696 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAACTTGAA+AGG | + | chr1_1:669680-669699 | Msa0000040:intron | 10.0% |
| !!! | ATGACTTTTATAAAAAATAA+TGG | - | chr1_1:669264-669283 | None:intergenic | 10.0% |
| !!! | TTATTTTTTATAAAAGTCAT+TGG | + | chr1_1:669264-669283 | Msa0000040:intron | 10.0% |
| !! | TGTATTAAAAATATAGTATA+TGG | - | chr1_1:669358-669377 | None:intergenic | 10.0% |
| !!! | AAGTTTTTTTTTTTTTTTCT+TGG | - | chr1_1:669677-669696 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAACTTGAA+AGG | + | chr1_1:669680-669699 | Msa0000040:intron | 10.0% |
| !!! | AAATTGAATTTTACTATATC+AGG | + | chr1_1:669954-669973 | Msa0000040:intron | 15.0% |
| !!! | AAATTGAATTTTACTATATC+AGG | + | chr1_1:669954-669973 | Msa0000040:intron | 15.0% |
| ! | CTAGGAAACAAATAATATGT+AGG | - | chr1_1:669143-669162 | None:intergenic | 25.0% |
| !!! | AGAAGAGATTAGTTTTATAG+CGG | + | chr1_1:669379-669398 | Msa0000040:intron | 25.0% |
| ! | GATAATGCATAATATATGCA+GGG | + | chr1_1:669584-669603 | Msa0000040:intron | 25.0% |
| ! | ATTTAAACCAACTTAATCCT+AGG | + | chr1_1:669768-669787 | Msa0000040:intron | 25.0% |
| ! | ACTATATTAGAAACTTGAAC+AGG | + | chr1_1:670010-670029 | Msa0000040:CDS | 25.0% |
| ! | CTATATTAGAAACTTGAACA+GGG | + | chr1_1:670011-670030 | Msa0000040:CDS | 25.0% |
| ! | CTAGGAAACAAATAATATGT+AGG | - | chr1_1:669143-669162 | None:intergenic | 25.0% |
| !!! | AGAAGAGATTAGTTTTATAG+CGG | + | chr1_1:669379-669398 | Msa0000040:intron | 25.0% |
| ! | GATAATGCATAATATATGCA+GGG | + | chr1_1:669584-669603 | Msa0000040:intron | 25.0% |
| ! | ATTTAAACCAACTTAATCCT+AGG | + | chr1_1:669768-669787 | Msa0000040:intron | 25.0% |
| ! | ACTATATTAGAAACTTGAAC+AGG | + | chr1_1:670010-670029 | Msa0000040:CDS | 25.0% |
| ! | CTATATTAGAAACTTGAACA+GGG | + | chr1_1:670011-670030 | Msa0000040:CDS | 25.0% |
| !! | CTAGTCTTTTGATTAAGACT+AGG | - | chr1_1:669161-669180 | None:intergenic | 30.0% |
| GGATAATGCATAATATATGC+AGG | + | chr1_1:669583-669602 | Msa0000040:intron | 30.0% | |
| ACCATACTTATTCACCTTTA+AGG | + | chr1_1:669628-669647 | Msa0000040:intron | 30.0% | |
| ACCTTAAAGGTGAATAAGTA+TGG | - | chr1_1:669632-669651 | None:intergenic | 30.0% | |
| TACACTAGAGTAAGTATAAG+AGG | + | chr1_1:669743-669762 | Msa0000040:intron | 30.0% | |
| ACACTAGAGTAAGTATAAGA+GGG | + | chr1_1:669744-669763 | Msa0000040:intron | 30.0% | |
| CAAGAAAAAGGAACAACAAT+AGG | + | chr1_1:669804-669823 | Msa0000040:intron | 30.0% | |
| CATCAACAATTCTTGTAGAT+GGG | - | chr1_1:669879-669898 | None:intergenic | 30.0% | |
| ACATCAACAATTCTTGTAGA+TGG | - | chr1_1:669880-669899 | None:intergenic | 30.0% | |
| !! | CTAGTCTTTTGATTAAGACT+AGG | - | chr1_1:669161-669180 | None:intergenic | 30.0% |
| GGATAATGCATAATATATGC+AGG | + | chr1_1:669583-669602 | Msa0000040:intron | 30.0% | |
| ACCATACTTATTCACCTTTA+AGG | + | chr1_1:669628-669647 | Msa0000040:intron | 30.0% | |
| ACCTTAAAGGTGAATAAGTA+TGG | - | chr1_1:669632-669651 | None:intergenic | 30.0% | |
| TACACTAGAGTAAGTATAAG+AGG | + | chr1_1:669743-669762 | Msa0000040:intron | 30.0% | |
| ACACTAGAGTAAGTATAAGA+GGG | + | chr1_1:669744-669763 | Msa0000040:intron | 30.0% | |
| CAAGAAAAAGGAACAACAAT+AGG | + | chr1_1:669804-669823 | Msa0000040:intron | 30.0% | |
| CATCAACAATTCTTGTAGAT+GGG | - | chr1_1:669879-669898 | None:intergenic | 30.0% | |
| ACATCAACAATTCTTGTAGA+TGG | - | chr1_1:669880-669899 | None:intergenic | 30.0% | |
| GAGATACCCTATTAATCTAC+CGG | + | chr1_1:669423-669442 | Msa0000040:intron | 35.0% | |
| TGAGCTTAGTTCATTTGGTA+AGG | + | chr1_1:669561-669580 | Msa0000040:intron | 35.0% | |
| GAGCTTAGTTCATTTGGTAA+GGG | + | chr1_1:669562-669581 | Msa0000040:intron | 35.0% | |
| !! | TTATTCACCTTTAAGGTCTC+TGG | + | chr1_1:669635-669654 | Msa0000040:intron | 35.0% |
| ! | TTTCTTGGTCAATTAGCCTA+GGG | - | chr1_1:669662-669681 | None:intergenic | 35.0% |
| !! | TTTTCTTGGTCAATTAGCCT+AGG | - | chr1_1:669663-669682 | None:intergenic | 35.0% |
| AATAGGCCTAACAAATACGA+GGG | + | chr1_1:669821-669840 | Msa0000040:intron | 35.0% | |
| TTAATCCCCTCGTATTTGTT+AGG | - | chr1_1:669830-669849 | None:intergenic | 35.0% | |
| TCTTGTAGATGGGAAAAAAC+TGG | - | chr1_1:669869-669888 | None:intergenic | 35.0% | |
| TATATCAGGTTTCAGCTTCA+AGG | + | chr1_1:669968-669987 | Msa0000040:intron | 35.0% | |
| ATATCAGGTTTCAGCTTCAA+GGG | + | chr1_1:669969-669988 | Msa0000040:intron | 35.0% | |
| GAGATACCCTATTAATCTAC+CGG | + | chr1_1:669423-669442 | Msa0000040:intron | 35.0% | |
| TGAGCTTAGTTCATTTGGTA+AGG | + | chr1_1:669561-669580 | Msa0000040:intron | 35.0% | |
| GAGCTTAGTTCATTTGGTAA+GGG | + | chr1_1:669562-669581 | Msa0000040:intron | 35.0% | |
| !! | TTATTCACCTTTAAGGTCTC+TGG | + | chr1_1:669635-669654 | Msa0000040:intron | 35.0% |
| ! | TTTCTTGGTCAATTAGCCTA+GGG | - | chr1_1:669662-669681 | None:intergenic | 35.0% |
| !! | TTTTCTTGGTCAATTAGCCT+AGG | - | chr1_1:669663-669682 | None:intergenic | 35.0% |
| AATAGGCCTAACAAATACGA+GGG | + | chr1_1:669821-669840 | Msa0000040:intron | 35.0% | |
| TTAATCCCCTCGTATTTGTT+AGG | - | chr1_1:669830-669849 | None:intergenic | 35.0% | |
| TCTTGTAGATGGGAAAAAAC+TGG | - | chr1_1:669869-669888 | None:intergenic | 35.0% | |
| TATATCAGGTTTCAGCTTCA+AGG | + | chr1_1:669968-669987 | Msa0000040:intron | 35.0% | |
| ATATCAGGTTTCAGCTTCAA+GGG | + | chr1_1:669969-669988 | Msa0000040:intron | 35.0% | |
| AAGATCATGGATCTGATCGT+CGG | - | chr1_1:669059-669078 | None:intergenic | 40.0% | |
| TTCTTCCTGAGATTCGCAAT+AGG | + | chr1_1:669098-669117 | Msa0000040:CDS | 40.0% | |
| GACTCTCCGGTAGATTAATA+GGG | - | chr1_1:669432-669451 | None:intergenic | 40.0% | |
| TGACTCTCCGGTAGATTAAT+AGG | - | chr1_1:669433-669452 | None:intergenic | 40.0% | |
| !! | GAGCTGTTTTGTGAGCTTTT+AGG | - | chr1_1:669475-669494 | None:intergenic | 40.0% |
| AGCTCAGAAGGACTTCTTTA+CGG | - | chr1_1:669547-669566 | None:intergenic | 40.0% | |
| CCAAATGAACTAAGCTCAGA+AGG | - | chr1_1:669559-669578 | None:intergenic | 40.0% | |
| CCTTCTGAGCTTAGTTCATT+TGG | + | chr1_1:669556-669575 | Msa0000040:intron | 40.0% | |
| TGCATAATATATGCAGGGAC+CGG | + | chr1_1:669589-669608 | Msa0000040:intron | 40.0% | |
| GTGAATAAGTATGGTGTCTG+GGG | - | chr1_1:669623-669642 | None:intergenic | 40.0% | |
| GGTGAATAAGTATGGTGTCT+GGG | - | chr1_1:669624-669643 | None:intergenic | 40.0% | |
| AGGTGAATAAGTATGGTGTC+TGG | - | chr1_1:669625-669644 | None:intergenic | 40.0% | |
| ! | TTCTTGGTCAATTAGCCTAG+GGG | - | chr1_1:669661-669680 | None:intergenic | 40.0% |
| !! | CCTTTTTCTTGTTATGTCCC+TGG | - | chr1_1:669795-669814 | None:intergenic | 40.0% |
| CCAGGGACATAACAAGAAAA+AGG | + | chr1_1:669792-669811 | Msa0000040:intron | 40.0% | |
| CAATAGGCCTAACAAATACG+AGG | + | chr1_1:669820-669839 | Msa0000040:intron | 40.0% | |
| ATAGGCCTAACAAATACGAG+GGG | + | chr1_1:669822-669841 | Msa0000040:intron | 40.0% | |
| AAGATCATGGATCTGATCGT+CGG | - | chr1_1:669059-669078 | None:intergenic | 40.0% | |
| TTCTTCCTGAGATTCGCAAT+AGG | + | chr1_1:669098-669117 | Msa0000040:CDS | 40.0% | |
| GACTCTCCGGTAGATTAATA+GGG | - | chr1_1:669432-669451 | None:intergenic | 40.0% | |
| TGACTCTCCGGTAGATTAAT+AGG | - | chr1_1:669433-669452 | None:intergenic | 40.0% | |
| !! | GAGCTGTTTTGTGAGCTTTT+AGG | - | chr1_1:669475-669494 | None:intergenic | 40.0% |
| AGCTCAGAAGGACTTCTTTA+CGG | - | chr1_1:669547-669566 | None:intergenic | 40.0% | |
| CCAAATGAACTAAGCTCAGA+AGG | - | chr1_1:669559-669578 | None:intergenic | 40.0% | |
| CCTTCTGAGCTTAGTTCATT+TGG | + | chr1_1:669556-669575 | Msa0000040:intron | 40.0% | |
| TGCATAATATATGCAGGGAC+CGG | + | chr1_1:669589-669608 | Msa0000040:intron | 40.0% | |
| GTGAATAAGTATGGTGTCTG+GGG | - | chr1_1:669623-669642 | None:intergenic | 40.0% | |
| GGTGAATAAGTATGGTGTCT+GGG | - | chr1_1:669624-669643 | None:intergenic | 40.0% | |
| AGGTGAATAAGTATGGTGTC+TGG | - | chr1_1:669625-669644 | None:intergenic | 40.0% | |
| ! | TTCTTGGTCAATTAGCCTAG+GGG | - | chr1_1:669661-669680 | None:intergenic | 40.0% |
| !! | CCTTTTTCTTGTTATGTCCC+TGG | - | chr1_1:669795-669814 | None:intergenic | 40.0% |
| CCAGGGACATAACAAGAAAA+AGG | + | chr1_1:669792-669811 | Msa0000040:intron | 40.0% | |
| CAATAGGCCTAACAAATACG+AGG | + | chr1_1:669820-669839 | Msa0000040:intron | 40.0% | |
| ATAGGCCTAACAAATACGAG+GGG | + | chr1_1:669822-669841 | Msa0000040:intron | 40.0% | |
| ACCAACTTAATCCTAGGTCC+AGG | + | chr1_1:669774-669793 | Msa0000040:intron | 45.0% | |
| CCAACTTAATCCTAGGTCCA+GGG | + | chr1_1:669775-669794 | Msa0000040:intron | 45.0% | |
| TGAGCGTTTGTCTGAGCTAT+TGG | + | chr1_1:670050-670069 | Msa0000040:CDS | 45.0% | |
| ACCAACTTAATCCTAGGTCC+AGG | + | chr1_1:669774-669793 | Msa0000040:intron | 45.0% | |
| CCAACTTAATCCTAGGTCCA+GGG | + | chr1_1:669775-669794 | Msa0000040:intron | 45.0% | |
| TGAGCGTTTGTCTGAGCTAT+TGG | + | chr1_1:670050-670069 | Msa0000040:CDS | 45.0% | |
| GCAGCTTGGAGACAAGATCA+TGG | - | chr1_1:669072-669091 | None:intergenic | 50.0% | |
| AGGAAGAAGTTGCTGCAGCT+TGG | - | chr1_1:669086-669105 | None:intergenic | 50.0% | |
| GAGCTCCTATTGCGAATCTC+AGG | - | chr1_1:669106-669125 | None:intergenic | 50.0% | |
| ! | TCGCAATAGGAGCTCTGACA+AGG | + | chr1_1:669111-669130 | Msa0000040:CDS | 50.0% |
| ! | CATGGTTAGAGCTGACTCTC+CGG | - | chr1_1:669445-669464 | None:intergenic | 50.0% |
| ! | AGAGTCAGCTCTAACCATGG+TGG | + | chr1_1:669446-669465 | Msa0000040:intron | 50.0% |
| !! | GAGCTTTTAGGAGTCCACCA+TGG | - | chr1_1:669463-669482 | None:intergenic | 50.0% |
| CCCTGGACCTAGGATTAAGT+TGG | - | chr1_1:669778-669797 | None:intergenic | 50.0% | |
| ! | CTTGTTATGTCCCTGGACCT+AGG | - | chr1_1:669788-669807 | None:intergenic | 50.0% |
| !! | TTCAGCTTCAAGGGTGTTGC+AGG | + | chr1_1:669978-669997 | Msa0000040:CDS | 50.0% |
| GCTCAGACAAACGCTCACTT+AGG | - | chr1_1:670047-670066 | None:intergenic | 50.0% | |
| GCAGCTTGGAGACAAGATCA+TGG | - | chr1_1:669072-669091 | None:intergenic | 50.0% | |
| AGGAAGAAGTTGCTGCAGCT+TGG | - | chr1_1:669086-669105 | None:intergenic | 50.0% | |
| GAGCTCCTATTGCGAATCTC+AGG | - | chr1_1:669106-669125 | None:intergenic | 50.0% | |
| ! | TCGCAATAGGAGCTCTGACA+AGG | + | chr1_1:669111-669130 | Msa0000040:CDS | 50.0% |
| ! | CATGGTTAGAGCTGACTCTC+CGG | - | chr1_1:669445-669464 | None:intergenic | 50.0% |
| ! | AGAGTCAGCTCTAACCATGG+TGG | + | chr1_1:669446-669465 | Msa0000040:intron | 50.0% |
| !! | GAGCTTTTAGGAGTCCACCA+TGG | - | chr1_1:669463-669482 | None:intergenic | 50.0% |
| CCCTGGACCTAGGATTAAGT+TGG | - | chr1_1:669778-669797 | None:intergenic | 50.0% | |
| ! | CTTGTTATGTCCCTGGACCT+AGG | - | chr1_1:669788-669807 | None:intergenic | 50.0% |
| !! | TTCAGCTTCAAGGGTGTTGC+AGG | + | chr1_1:669978-669997 | Msa0000040:CDS | 50.0% |
| GCTCAGACAAACGCTCACTT+AGG | - | chr1_1:670047-670066 | None:intergenic | 50.0% | |
| CACGGCAAACAAGTAGCTCG+AGG | + | chr1_1:669026-669045 | Msa0000040:CDS | 55.0% | |
| ! | CGGAGAGTCAGCTCTAACCA+TGG | + | chr1_1:669443-669462 | Msa0000040:intron | 55.0% |
| CTAGGGGCCAGAGACCTTAA+AGG | - | chr1_1:669645-669664 | None:intergenic | 55.0% | |
| !! | CTTTAAGGTCTCTGGCCCCT+AGG | + | chr1_1:669643-669662 | Msa0000040:intron | 55.0% |
| CACGGCAAACAAGTAGCTCG+AGG | + | chr1_1:669026-669045 | Msa0000040:CDS | 55.0% | |
| ! | CGGAGAGTCAGCTCTAACCA+TGG | + | chr1_1:669443-669462 | Msa0000040:intron | 55.0% |
| CTAGGGGCCAGAGACCTTAA+AGG | - | chr1_1:669645-669664 | None:intergenic | 55.0% | |
| !! | CTTTAAGGTCTCTGGCCCCT+AGG | + | chr1_1:669643-669662 | Msa0000040:intron | 55.0% |
| ! | GGTGTCTGGGGTTCGAACTC+CGG | - | chr1_1:669611-669630 | None:intergenic | 60.0% |
| ! | GGTGTCTGGGGTTCGAACTC+CGG | - | chr1_1:669611-669630 | None:intergenic | 60.0% |
| CTAGCAGGAGGTCGCGGTCA+CGG | + | chr1_1:669008-669027 | Msa0000040:CDS | 65.0% | |
| CTAGCAGGAGGTCGCGGTCA+CGG | + | chr1_1:669008-669027 | Msa0000040:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 669004 | 670125 | 669004 | ID=Msa0000040;Name=Msa0000040 |
| chr1_1 | mRNA | 669004 | 670125 | 669004 | ID=Msa0000040-mRNA-1;Parent=Msa0000040;Name=Msa0000040-mRNA-1;_AED=0.04;_eAED=0.05;_QI=0|0|0|1|1|1|2|0|92 |
| chr1_1 | exon | 669004 | 669132 | 669004 | ID=Msa0000040-mRNA-1:exon:4;Parent=Msa0000040-mRNA-1 |
| chr1_1 | exon | 669976 | 670125 | 669976 | ID=Msa0000040-mRNA-1:exon:5;Parent=Msa0000040-mRNA-1 |
| chr1_1 | CDS | 669004 | 669132 | 669004 | ID=Msa0000040-mRNA-1:cds;Parent=Msa0000040-mRNA-1 |
| chr1_1 | CDS | 669976 | 670125 | 669976 | ID=Msa0000040-mRNA-1:cds;Parent=Msa0000040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
