Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000890 | sp|Q9AR19|GCN5_ARATH | 66.365 | 553 | 130 | 9 | 3 | 519 | 6 | 538 | 0.0 | 662 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0000890 | TR | GNAT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000890 | Msa0436100 | 0.807020 | 6.198734e-50 | -8.615850e-47 |
| Msa0000890 | Msa1149910 | 0.800979 | 1.117546e-48 | -8.615850e-47 |
| Msa0000890 | Msa1373830 | 0.953297 | 3.740462e-111 | -8.615850e-47 |
| Msa0000890 | Msa1433680 | 0.985174 | 9.421230e-163 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000890 | MtrunA17_Chr7g0260581 | 88.158 | 532 | 30 | 3 | 1 | 519 | 1 | 512 | 0.0 | 861 |
| Msa0000890 | MtrunA17_Chr8g0363991 | 70.812 | 394 | 78 | 6 | 143 | 519 | 44 | 417 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0000890 | AT3G54610.1 | 66.365 | 553 | 130 | 9 | 3 | 519 | 6 | 538 | 0.0 | 662 |
Find 157 sgRNAs with CRISPR-Local
Find 801 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCCGTGTGATTCCATCTT+AGG | 0.126496 | 1_1:-2283116 | None:intergenic |
| ACGGCTGATGAGCAAGTAAA+AGG | 0.251275 | 1_1:+2286798 | Msa0000890:CDS |
| TTATAACCATTACAGACTTA+TGG | 0.303288 | 1_1:-2286088 | None:intergenic |
| CGGAGACGAGTTTGCGTTTG+TGG | 0.311427 | 1_1:-2283214 | None:intergenic |
| GCTTTGCTCCATAGGTTGAT+AGG | 0.326757 | 1_1:+2285079 | Msa0000890:intron |
| TTGATGATTTCATAATAATC+AGG | 0.349454 | 1_1:-2293351 | None:intergenic |
| ATGTACTCCTTGGGCATATT+GGG | 0.349906 | 1_1:-2285130 | None:intergenic |
| GCTGGTGGTGGTTCTGTTCC+CGG | 0.350187 | 1_1:+2283563 | Msa0000890:CDS |
| AATGTACTCCTTGGGCATAT+TGG | 0.350870 | 1_1:-2285131 | None:intergenic |
| TGTTCCCGGCATTGTGGTTA+AGG | 0.351443 | 1_1:+2283577 | Msa0000890:CDS |
| CAGTATGCTCGTGATGTAGA+TGG | 0.352269 | 1_1:+2286852 | Msa0000890:CDS |
| CGCCGTGTGATTCCATCTTA+GGG | 0.355360 | 1_1:-2283115 | None:intergenic |
| ACGAATTATTACCTTGCATA+TGG | 0.360069 | 1_1:-2286146 | None:intergenic |
| GCGGAGGACCACTCCGTTCC+CGG | 0.369848 | 1_1:+2283135 | Msa0000890:CDS |
| GTCGCGTGTGTCGGCGGATA+AGG | 0.370974 | 1_1:-2283267 | None:intergenic |
| ATAAGTCTGTAATGGTTATA+AGG | 0.370987 | 1_1:+2286090 | Msa0000890:CDS |
| GTACATTGTCCGGCTTGTTA+TGG | 0.371441 | 1_1:+2285147 | Msa0000890:CDS |
| CGCTGATGCTTGGCCATTCA+AGG | 0.378468 | 1_1:+2293305 | Msa0000890:CDS |
| CCTGTCACCGGTGCCGGTGC+TGG | 0.387925 | 1_1:+2283545 | Msa0000890:CDS |
| AATTGTCACATTGTTTATCC+TGG | 0.388783 | 1_1:+2290561 | Msa0000890:CDS |
| TTGTCATTTCAGTTACATAA+AGG | 0.392837 | 1_1:+2288400 | Msa0000890:intron |
| TTACATGGCTGATTGATCAT+TGG | 0.393201 | 1_1:-2294078 | None:intergenic |
| GTGGGATGGAGAAGCGGATT+GGG | 0.395143 | 1_1:-2283162 | None:intergenic |
| AAATCAGTGTAAGGAAGCTT+TGG | 0.395327 | 1_1:-2288461 | None:intergenic |
| TGTTGGATATTTCATCAAAC+AGG | 0.399632 | 1_1:+2286911 | Msa0000890:CDS |
| TACATGGCTGATTGATCATT+GGG | 0.401214 | 1_1:-2294077 | None:intergenic |
| TGAGGTGGCGGAAGCGGAGG+CGG | 0.412980 | 1_1:-2283186 | None:intergenic |
| GTCGTCGACAACTGCATCTT+CGG | 0.415404 | 1_1:-2283363 | None:intergenic |
| ACCTTCTGAAAATCGATTCC+AGG | 0.416400 | 1_1:-2290579 | None:intergenic |
| GATGGATGAGGTGGCGGAAG+CGG | 0.418204 | 1_1:-2283192 | None:intergenic |
| GAACGGTGGCGCGTGATCTT+CGG | 0.429922 | 1_1:-2283234 | None:intergenic |
| TCCCTACTGAACTTTGTTGC+CGG | 0.434871 | 1_1:-2293998 | None:intergenic |
| AACAGAACCACCACCAGCAC+CGG | 0.436102 | 1_1:-2283558 | None:intergenic |
| ATCTGAAGACAATGAGTAAG+AGG | 0.441257 | 1_1:+2293716 | Msa0000890:CDS |
| GGACCTCCTGTCACCGGTGC+CGG | 0.442787 | 1_1:+2283539 | Msa0000890:CDS |
| ACTGAACTTTGTTGCCGGAC+TGG | 0.445882 | 1_1:-2293993 | None:intergenic |
| CATTCACGGTTCAGAACCTT+AGG | 0.449882 | 1_1:+2293010 | Msa0000890:CDS |
| ATTTATGCGTACACTTCTAA+AGG | 0.451557 | 1_1:+2293075 | Msa0000890:CDS |
| ATCAGCCGTAATTGCACAAA+AGG | 0.453536 | 1_1:-2286784 | None:intergenic |
| CCAGCACCGGCACCGGTGAC+AGG | 0.454890 | 1_1:-2283545 | None:intergenic |
| GCATCAACGGGTTCCTTGAA+TGG | 0.456294 | 1_1:-2293318 | None:intergenic |
| CGTGAATGACCCCACTGATC+AGG | 0.456735 | 1_1:-2292995 | None:intergenic |
| TTTCTTGAGACTCTCTTCCC+TGG | 0.457802 | 1_1:-2283654 | None:intergenic |
| ACCGGTGCCGGTGCTGGTGG+TGG | 0.463930 | 1_1:+2283551 | Msa0000890:CDS |
| GATGCTCTCGAGGTCGTCAT+TGG | 0.466061 | 1_1:-2283303 | None:intergenic |
| TGATGGAGTTGACCAGCATA+TGG | 0.467588 | 1_1:+2284263 | Msa0000890:CDS |
| TGGATGGACTCCTGATCAGT+GGG | 0.469379 | 1_1:+2292985 | Msa0000890:CDS |
| CACAATATGCAGAAAGAAGC+TGG | 0.470711 | 1_1:+2290908 | Msa0000890:intron |
| GGCGGAAGCGGAGGCGGAGT+GGG | 0.471897 | 1_1:-2283180 | None:intergenic |
| CTGATCAGTGGGGTCATTCA+CGG | 0.472254 | 1_1:+2292996 | Msa0000890:CDS |
| ATGGTTGATAGCCAGAGGTT+TGG | 0.476007 | 1_1:+2286753 | Msa0000890:intron |
| GGAACATCTCGTGCATCAAC+GGG | 0.478670 | 1_1:-2293330 | None:intergenic |
| GAAGCGGAGGCGGAGTGGGA+TGG | 0.479379 | 1_1:-2283176 | None:intergenic |
| CTAGTGGTGCTTATAGTGCC+AGG | 0.482208 | 1_1:+2283636 | Msa0000890:CDS |
| AAGCCGGACAATGTACTCCT+TGG | 0.484190 | 1_1:-2285140 | None:intergenic |
| GGATGAGGTGGCGGAAGCGG+AGG | 0.488516 | 1_1:-2283189 | None:intergenic |
| ATAAGGCGTAATCACGTTGT+TGG | 0.488617 | 1_1:+2286107 | Msa0000890:CDS |
| TTTACATGTCTGTCAAATGA+TGG | 0.489812 | 1_1:+2284246 | Msa0000890:CDS |
| GACGAGTTTGCGTTTGTGGA+TGG | 0.492132 | 1_1:-2283210 | None:intergenic |
| ATCTTACCTGTCTTTGACGA+CGG | 0.492727 | 1_1:-2288496 | None:intergenic |
| ATCCTCCTTAACCACAATGC+CGG | 0.498095 | 1_1:-2283582 | None:intergenic |
| AGTGGGATGGAGAAGCGGAT+TGG | 0.499028 | 1_1:-2283163 | None:intergenic |
| TAGGAGCCATAAGTCTGTAA+TGG | 0.501041 | 1_1:+2286082 | Msa0000890:intron |
| TGCCCAAGGAGTACATTGTC+CGG | 0.501356 | 1_1:+2285137 | Msa0000890:CDS |
| ATAGTTGATAAATCAGTGTA+AGG | 0.505112 | 1_1:-2288470 | None:intergenic |
| GGCGCCGTCGCGTGTGTCGG+CGG | 0.506599 | 1_1:-2283273 | None:intergenic |
| TAAGGCGCCGTCGCGTGTGT+CGG | 0.507506 | 1_1:-2283276 | None:intergenic |
| AGTTACATAAAGGATTATGA+TGG | 0.508182 | 1_1:+2288410 | Msa0000890:intron |
| TTCGTATTGCGAGGAGCGGA+AGG | 0.508578 | 1_1:-2283458 | None:intergenic |
| AGGAACATCTCGTGCATCAA+CGG | 0.509312 | 1_1:-2293331 | None:intergenic |
| AAAATTATTGAAGACATCCC+TGG | 0.509554 | 1_1:+2290941 | Msa0000890:CDS |
| CGGCTGATGAGCAAGTAAAA+GGG | 0.509794 | 1_1:+2286799 | Msa0000890:CDS |
| TGAAATCATCAAAGATCCAA+TGG | 0.510815 | 1_1:+2293362 | Msa0000890:CDS |
| TGCATGATCACGCTGATGCT+TGG | 0.512665 | 1_1:+2293295 | Msa0000890:CDS |
| AGCCGGACAATGTACTCCTT+GGG | 0.520322 | 1_1:-2285139 | None:intergenic |
| CTGGATGGACTCCTGATCAG+TGG | 0.521067 | 1_1:+2292984 | Msa0000890:CDS |
| GAGTAAGAGGGTGGAGTCAG+AGG | 0.522291 | 1_1:+2293729 | Msa0000890:CDS |
| TCCTCCTTAACCACAATGCC+GGG | 0.522458 | 1_1:-2283581 | None:intergenic |
| GTTACATAAAGGATTATGAT+GGG | 0.522634 | 1_1:+2288411 | Msa0000890:intron |
| TCTAAATATAACAGTATGCA+TGG | 0.525272 | 1_1:-2294032 | None:intergenic |
| TTCACTTCAATTGCTTCCGA+CGG | 0.525273 | 1_1:-2283081 | None:intergenic |
| ATCAGAGTCGTTTCCACGAG+CGG | 0.526319 | 1_1:-2283327 | None:intergenic |
| TGGCGGAAGCGGAGGCGGAG+TGG | 0.526371 | 1_1:-2283181 | None:intergenic |
| GAGTTGACCAGCATATGGTT+TGG | 0.527640 | 1_1:+2284268 | Msa0000890:CDS |
| TTTGCGTTTGTGGATGGATG+AGG | 0.531469 | 1_1:-2283204 | None:intergenic |
| TCTGATGGAGCTAAAGATGC+TGG | 0.534732 | 1_1:+2283518 | Msa0000890:CDS |
| AGGCTATCTCACCAAACCTC+TGG | 0.536519 | 1_1:-2286764 | None:intergenic |
| GAGAAGCGGATTGGGAACTC+CGG | 0.537455 | 1_1:-2283154 | None:intergenic |
| GCTCTCGAGGTCGTCATTGG+AGG | 0.537689 | 1_1:-2283300 | None:intergenic |
| CTCGAGAGCATCTCCGCTCG+TGG | 0.538084 | 1_1:+2283314 | Msa0000890:CDS |
| GAAATCATCAAAGATCCAAT+GGG | 0.538815 | 1_1:+2293363 | Msa0000890:CDS |
| GGCGGAGTGGGATGGAGAAG+CGG | 0.540145 | 1_1:-2283168 | None:intergenic |
| TATGATCCGTCGTCAAAGAC+AGG | 0.542109 | 1_1:+2288490 | Msa0000890:CDS |
| AGTCGATACTACTACTTACA+TGG | 0.542326 | 1_1:-2294093 | None:intergenic |
| AAGAGAGTAAAACCCTAAGA+TGG | 0.544360 | 1_1:+2283103 | Msa0000890:exon |
| ATGCCAATAACAGGAGAGGC+TGG | 0.548422 | 1_1:+2292965 | Msa0000890:intron |
| TGTTATACCAAACCATATGC+TGG | 0.553929 | 1_1:-2284275 | None:intergenic |
| TGCGGAATTTCACTGCTGCT+AGG | 0.554071 | 1_1:+2283423 | Msa0000890:CDS |
| TTGGAGAAAGATCGATGGCA+TGG | 0.554213 | 1_1:+2288068 | Msa0000890:CDS |
| ATATCCAACAGCATTATTGT+CGG | 0.554921 | 1_1:-2286898 | None:intergenic |
| GTTAAGATCGAACAATCTGA+TGG | 0.556232 | 1_1:+2283503 | Msa0000890:CDS |
| GGAAGAGAGTCTCAAGAAAG+AGG | 0.556806 | 1_1:+2283658 | Msa0000890:CDS |
| GAGGTCGTCATTGGAGGTTA+AGG | 0.557908 | 1_1:-2283294 | None:intergenic |
| TATGCCGACAATAATGCTGT+TGG | 0.559755 | 1_1:+2286894 | Msa0000890:CDS |
| CACAAAATAGCACGCACCGT+CGG | 0.560425 | 1_1:+2283065 | Msa0000890:five_prime_UTR |
| GTGCATTCGATTCTCCAGTC+CGG | 0.560644 | 1_1:+2293979 | Msa0000890:CDS |
| GATGAGCAAGTAAAAGGGTA+TGG | 0.564172 | 1_1:+2286804 | Msa0000890:CDS |
| AGGCGTAATCACGTTGTTGG+AGG | 0.565781 | 1_1:+2286110 | Msa0000890:CDS |
| GTCACCGGTGCCGGTGCTGG+TGG | 0.566159 | 1_1:+2283548 | Msa0000890:CDS |
| GTGTCGGCGGATAAGGAAGA+AGG | 0.571324 | 1_1:-2283260 | None:intergenic |
| GATGCTGGACCTCCTGTCAC+CGG | 0.572004 | 1_1:+2283533 | Msa0000890:CDS |
| CGGATTGGGAACTCCGGGAA+CGG | 0.572901 | 1_1:-2283148 | None:intergenic |
| ACCACCACCAGCACCGGCAC+CGG | 0.575214 | 1_1:-2283552 | None:intergenic |
| AGAAGCGGATTGGGAACTCC+GGG | 0.578469 | 1_1:-2283153 | None:intergenic |
| ACTGAAAATTTGCAGACTAG+TGG | 0.582825 | 1_1:+2283620 | Msa0000890:CDS |
| AATGTCGGTAGAACCGCCTA+AGG | 0.583109 | 1_1:-2293026 | None:intergenic |
| ATTTACTAAAGAGATTCACT+TGG | 0.583909 | 1_1:+2288049 | Msa0000890:CDS |
| CAATAACAGGAGAGGCTGGA+TGG | 0.587038 | 1_1:+2292969 | Msa0000890:intron |
| GTCCGGCAACAAAGTTCAGT+AGG | 0.592842 | 1_1:+2293996 | Msa0000890:CDS |
| GATAAGGAAGAAGGAGGGAA+CGG | 0.599465 | 1_1:-2283251 | None:intergenic |
| ATGAATGAAAATTTGAGTCG+AGG | 0.601535 | 1_1:-2293117 | None:intergenic |
| TTCACTTGGAGAAAGATCGA+TGG | 0.601600 | 1_1:+2288063 | Msa0000890:CDS |
| TTTGTGGATGGATGAGGTGG+CGG | 0.603088 | 1_1:-2283198 | None:intergenic |
| TGGAGAAAGATCGATGGCAT+GGG | 0.610281 | 1_1:+2288069 | Msa0000890:CDS |
| TACATAAAGGATTATGATGG+GGG | 0.611600 | 1_1:+2288413 | Msa0000890:CDS |
| TCCCGGCATTGTGGTTAAGG+AGG | 0.613963 | 1_1:+2283580 | Msa0000890:CDS |
| GCGTTTGTGGATGGATGAGG+TGG | 0.614248 | 1_1:-2283201 | None:intergenic |
| GCACCGGCACCGGTGACAGG+AGG | 0.615036 | 1_1:-2283542 | None:intergenic |
| TTACATATCGTCCATATGCA+AGG | 0.615036 | 1_1:+2286135 | Msa0000890:CDS |
| CACGAGCGGAGATGCTCTCG+AGG | 0.618882 | 1_1:-2283313 | None:intergenic |
| TAAAGTACGTACTTAAACCA+GGG | 0.618961 | 1_1:-2290958 | None:intergenic |
| TCCGGCAACAAAGTTCAGTA+GGG | 0.624085 | 1_1:+2293997 | Msa0000890:CDS |
| AAGGAAGAAGGAGGGAACGG+TGG | 0.624336 | 1_1:-2283248 | None:intergenic |
| AGCAGCAGTGAAATTCCGCA+TGG | 0.625316 | 1_1:-2283420 | None:intergenic |
| TTGTCCGGCTTGTTATGGAT+AGG | 0.625760 | 1_1:+2285152 | Msa0000890:CDS |
| TCACGGTTCAGAACCTTAGG+CGG | 0.626652 | 1_1:+2293013 | Msa0000890:CDS |
| AGTATGCTCGTGATGTAGAT+GGG | 0.632008 | 1_1:+2286853 | Msa0000890:CDS |
| TCGGCGGATAAGGAAGAAGG+AGG | 0.632387 | 1_1:-2283257 | None:intergenic |
| TGGGAACTCCGGGAACGGAG+TGG | 0.633367 | 1_1:-2283143 | None:intergenic |
| TTACATAAAGGATTATGATG+GGG | 0.635970 | 1_1:+2288412 | Msa0000890:CDS |
| TCTGAAGACAATGAGTAAGA+GGG | 0.636310 | 1_1:+2293717 | Msa0000890:CDS |
| AAGATGGAATCACACGGCGG+AGG | 0.639882 | 1_1:+2283119 | Msa0000890:exon |
| ATAAAGTACGTACTTAAACC+AGG | 0.643028 | 1_1:-2290959 | None:intergenic |
| ATTACCTATCCATAACAAGC+CGG | 0.643590 | 1_1:-2285156 | None:intergenic |
| TAGTGGTGCTTATAGTGCCA+GGG | 0.645563 | 1_1:+2283637 | Msa0000890:CDS |
| GAAGACAATGAGTAAGAGGG+TGG | 0.646755 | 1_1:+2293720 | Msa0000890:CDS |
| TGGTTCTGTTCCCGGCATTG+TGG | 0.649546 | 1_1:+2283571 | Msa0000890:CDS |
| ACAACTTCCCAATATGCCCA+AGG | 0.664012 | 1_1:+2285123 | Msa0000890:CDS |
| TTATCCGCCGACACACGCGA+CGG | 0.678662 | 1_1:+2283269 | Msa0000890:CDS |
| GGATGGACTCCTGATCAGTG+GGG | 0.689699 | 1_1:+2292986 | Msa0000890:CDS |
| CGGCGGATAAGGAAGAAGGA+GGG | 0.691761 | 1_1:-2283256 | None:intergenic |
| AGCAGTGAAATTCCGCATGG+AGG | 0.698326 | 1_1:-2283417 | None:intergenic |
| ATGACAACGGTTCCTCCATG+CGG | 0.702038 | 1_1:+2283405 | Msa0000890:CDS |
| AACCCTAAGATGGAATCACA+CGG | 0.703924 | 1_1:+2283113 | Msa0000890:exon |
| GATCTTCGTATTGCGAGGAG+CGG | 0.710031 | 1_1:-2283462 | None:intergenic |
| GACGAGTACGATAATGACAA+CGG | 0.726249 | 1_1:+2283392 | Msa0000890:CDS |
| CCTAAGATGGAATCACACGG+CGG | 0.818286 | 1_1:+2283116 | Msa0000890:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTATTTTTTGTGAA+TGG | - | chr1_1:2284839-2284858 | None:intergenic | 10.0% |
| !! | AAATTATAGAAAAAATAAGT+AGG | - | chr1_1:2286654-2286673 | None:intergenic | 10.0% |
| !! | TAAATATAGAAATATTATCT+TGG | + | chr1_1:2287153-2287172 | Msa0000890:intron | 10.0% |
| !!! | AATTATTTTTTAAATTTGGA+AGG | + | chr1_1:2287935-2287954 | Msa0000890:intron | 10.0% |
| !!! | ATTATTTTTTAAATTTGGAA+GGG | + | chr1_1:2287936-2287955 | Msa0000890:intron | 10.0% |
| !!! | TTTTATTTTAATAAAAAGAC+AGG | + | chr1_1:2288604-2288623 | Msa0000890:intron | 10.0% |
| !!! | TTTTTTTACAAAATTTAAAC+TGG | - | chr1_1:2290355-2290374 | None:intergenic | 10.0% |
| !! | AAATTTAATAAAAGGAAAAT+GGG | - | chr1_1:2291525-2291544 | None:intergenic | 10.0% |
| !! | TTTCTTTCAAATTTAATAAA+AGG | - | chr1_1:2291533-2291552 | None:intergenic | 10.0% |
| !! | TTTGTAAAAAAAAAAAAAAC+GGG | - | chr1_1:2291916-2291935 | None:intergenic | 10.0% |
| !! | TAAAGAATAAAAAGAATTAA+TGG | - | chr1_1:2292606-2292625 | None:intergenic | 10.0% |
| !! | AATTTAATTAAGGAAAATTT+AGG | - | chr1_1:2292581-2292600 | None:intergenic | 10.0% |
| !!! | TTTTATTGAATTATCATTTT+AGG | - | chr1_1:2292125-2292144 | None:intergenic | 10.0% |
| !!! | TTTTATTTGTACAAAAAAAA+AGG | - | chr1_1:2292318-2292337 | None:intergenic | 10.0% |
| !!! | ATCTCATATTTTTTTATTTA+TGG | + | chr1_1:2292410-2292429 | Msa0000890:intron | 10.0% |
| !! | AATTTAATTAAGGAAAATTT+AGG | + | chr1_1:2292581-2292600 | Msa0000890:intron | 10.0% |
| !! | TAAAGAATAAAAAGAATTAA+TGG | + | chr1_1:2292606-2292625 | Msa0000890:intron | 10.0% |
| !! | TTAAGTTAATATGAAATATA+AGG | - | chr1_1:2293399-2293418 | None:intergenic | 10.0% |
| !!! | ACTAAATTTTTAATTTTCAA+TGG | + | chr1_1:2293583-2293602 | Msa0000890:intron | 10.0% |
| !!! | TTTCTTATTTTAAAAAGAAT+TGG | + | chr1_1:2294183-2294202 | Msa0000890:three_prime_UTR | 10.0% |
| !!! | ATATTTATGCTCTTTTTTAT+AGG | + | chr1_1:2284468-2284487 | Msa0000890:intron | 15.0% |
| !! | GTTAAGATATTAAAAATTAG+TGG | + | chr1_1:2284686-2284705 | Msa0000890:intron | 15.0% |
| !!! | TTTTTCTACATAGAAATTAT+GGG | - | chr1_1:2285481-2285500 | None:intergenic | 15.0% |
| !!! | TTTTTTCTACATAGAAATTA+TGG | - | chr1_1:2285482-2285501 | None:intergenic | 15.0% |
| !! | GGAAAAAAATAATAATATCT+AGG | - | chr1_1:2285998-2286017 | None:intergenic | 15.0% |
| !!! | TTAATTATGAAACCTTTTTA+TGG | + | chr1_1:2286051-2286070 | Msa0000890:intron | 15.0% |
| !! | ACATGAATATAGATATAAAA+GGG | - | chr1_1:2286346-2286365 | None:intergenic | 15.0% |
| !!! | ACAAGTAAAATTTTTTTAGT+CGG | - | chr1_1:2286690-2286709 | None:intergenic | 15.0% |
| !!! | CTAAAAAAATTTTACTTGTA+AGG | + | chr1_1:2286691-2286710 | Msa0000890:intron | 15.0% |
| !! | AGTATTAATAAATTAAACCA+TGG | - | chr1_1:2286723-2286742 | None:intergenic | 15.0% |
| !! | AGCAAAAAGATTAATATTTA+GGG | - | chr1_1:2287045-2287064 | None:intergenic | 15.0% |
| !! | TAGCAAAAAGATTAATATTT+AGG | - | chr1_1:2287046-2287065 | None:intergenic | 15.0% |
| !!! | TTCTATTTCATTTAATCTTT+TGG | + | chr1_1:2287903-2287922 | Msa0000890:intron | 15.0% |
| !!! | TTATTTTTTAAATTTGGAAG+GGG | + | chr1_1:2287937-2287956 | Msa0000890:intron | 15.0% |
| !!! | TTATCTAAAACATTTTAGAT+GGG | - | chr1_1:2288583-2288602 | None:intergenic | 15.0% |
| !!! | TTTATCTAAAACATTTTAGA+TGG | - | chr1_1:2288584-2288603 | None:intergenic | 15.0% |
| !! | ATCAAATATGAAGTATAAAT+AGG | + | chr1_1:2289121-2289140 | Msa0000890:intron | 15.0% |
| !!! | AATTTTTTATAGCTTTGAAT+AGG | + | chr1_1:2289175-2289194 | Msa0000890:intron | 15.0% |
| !! | CAAATTTAATAAAAGGAAAA+TGG | - | chr1_1:2291526-2291545 | None:intergenic | 15.0% |
| !! | TTGTAAAAAAAAAAAAAACG+GGG | - | chr1_1:2291915-2291934 | None:intergenic | 15.0% |
| !!! | TTAATTCTTTAATCCTTTTA+AGG | + | chr1_1:2291985-2292004 | Msa0000890:intron | 15.0% |
| !!! | TTTTTTTAAGAATAGAAAAG+TGG | - | chr1_1:2292341-2292360 | None:intergenic | 15.0% |
| !! | AATTCATATTTCTTCATTTA+TGG | + | chr1_1:2292497-2292516 | Msa0000890:intron | 15.0% |
| !! | ATTATGTTTAATTCCTTAAA+AGG | + | chr1_1:2292546-2292565 | Msa0000890:intron | 15.0% |
| !!! | TTAATTCTTTAATCCTTTTA+AGG | - | chr1_1:2291985-2292004 | None:intergenic | 15.0% |
| !!! | TTTCTTTTTCATATTTTGTT+TGG | + | chr1_1:2292904-2292923 | Msa0000890:intron | 15.0% |
| !!! | ATTTTTTTAAATGTAAGACA+CGG | - | chr1_1:2293558-2293577 | None:intergenic | 15.0% |
| !! | AGTTTATGAAAAATGTCATA+AGG | - | chr1_1:2283948-2283967 | None:intergenic | 20.0% |
| !!! | AAATTTGTTACTGAATAGAA+TGG | + | chr1_1:2284498-2284517 | Msa0000890:intron | 20.0% |
| !! | GAAAAATACTCACATAAATT+AGG | - | chr1_1:2284780-2284799 | None:intergenic | 20.0% |
| !! | GTATTATGTTATAGGTTATA+TGG | - | chr1_1:2284809-2284828 | None:intergenic | 20.0% |
| !! | ACTAAAAAAATGTAGTCATT+AGG | - | chr1_1:2284877-2284896 | None:intergenic | 20.0% |
| !!! | TAAAATTATTTCTCCATTCA+AGG | + | chr1_1:2285261-2285280 | Msa0000890:intron | 20.0% |
| !!! | ATAAGACATGCTTTTTAATA+AGG | - | chr1_1:2285321-2285340 | None:intergenic | 20.0% |
| !!! | AGATTAAAGTTTGATTTGTA+AGG | + | chr1_1:2285873-2285892 | Msa0000890:intron | 20.0% |
| !!! | GATTAAAGTTTGATTTGTAA+GGG | + | chr1_1:2285874-2285893 | Msa0000890:intron | 20.0% |
| !! | TCATAATTAAAGACAAAATG+AGG | - | chr1_1:2286041-2286060 | None:intergenic | 20.0% |
| !! | GACATGAATATAGATATAAA+AGG | - | chr1_1:2286347-2286366 | None:intergenic | 20.0% |
| !! | CAGTTTGATTAATAATTTGA+CGG | + | chr1_1:2286568-2286587 | Msa0000890:intron | 20.0% |
| !! | AGTTTGATTAATAATTTGAC+GGG | + | chr1_1:2286569-2286588 | Msa0000890:intron | 20.0% |
| !!! | AAGTAAAATTTTTTTAGTCG+GGG | - | chr1_1:2286688-2286707 | None:intergenic | 20.0% |
| !!! | CAAGTAAAATTTTTTTAGTC+GGG | - | chr1_1:2286689-2286708 | None:intergenic | 20.0% |
| !! | TATTTATGATCATTATCATC+TGG | + | chr1_1:2286946-2286965 | Msa0000890:intron | 20.0% |
| !! | ATTTATGATCATTATCATCT+GGG | + | chr1_1:2286947-2286966 | Msa0000890:intron | 20.0% |
| !! | TTCATAATATATGTATGACT+TGG | - | chr1_1:2287016-2287035 | None:intergenic | 20.0% |
| !!! | CAAAGATAGAGATATTATTT+TGG | - | chr1_1:2287233-2287252 | None:intergenic | 20.0% |
| !!! | GAAATATGCATATTACTTTT+AGG | - | chr1_1:2287294-2287313 | None:intergenic | 20.0% |
| !! | ATGCTAATAGTATAATAGTA+TGG | + | chr1_1:2287395-2287414 | Msa0000890:intron | 20.0% |
| !!! | ATCAATATGTATTGCTATTA+TGG | + | chr1_1:2287421-2287440 | Msa0000890:intron | 20.0% |
| !! | GTACAACTAAAATATAGTAT+AGG | + | chr1_1:2287498-2287517 | Msa0000890:intron | 20.0% |
| !! | ATGTTGAAAAATACCTAATT+TGG | + | chr1_1:2287524-2287543 | Msa0000890:intron | 20.0% |
| !! | TGTTGAAAAATACCTAATTT+GGG | + | chr1_1:2287525-2287544 | Msa0000890:intron | 20.0% |
| !!! | AGAAAATAGAAAGTATGTAA+TGG | + | chr1_1:2287665-2287684 | Msa0000890:intron | 20.0% |
| !!! | GAAAATAGAAAGTATGTAAT+GGG | + | chr1_1:2287666-2287685 | Msa0000890:intron | 20.0% |
| !!! | ACTATTATTTTCCAGAATTA+GGG | - | chr1_1:2287701-2287720 | None:intergenic | 20.0% |
| !!! | TACTATTATTTTCCAGAATT+AGG | - | chr1_1:2287702-2287721 | None:intergenic | 20.0% |
| !!! | AATTCAACATAAGGTTTTTT+TGG | - | chr1_1:2287970-2287989 | None:intergenic | 20.0% |
| !!! | TTAATTTGCATTGTTAAAAC+AGG | + | chr1_1:2288543-2288562 | Msa0000890:intron | 20.0% |
| !!! | TAATTTGCATTGTTAAAACA+GGG | + | chr1_1:2288544-2288563 | Msa0000890:intron | 20.0% |
| !!! | AAGAAGCTTATTTGTTTTTT+TGG | + | chr1_1:2288676-2288695 | Msa0000890:intron | 20.0% |
| !!! | AGAAGCTTATTTGTTTTTTT+GGG | + | chr1_1:2288677-2288696 | Msa0000890:intron | 20.0% |
| !!! | ATAATAAGTTCTAGTTCAAT+TGG | - | chr1_1:2288810-2288829 | None:intergenic | 20.0% |
| !! | ATATGAAGTATAAATAGGAA+AGG | + | chr1_1:2289126-2289145 | Msa0000890:intron | 20.0% |
| !! | TATAAAATTGTATTGGAGAA+GGG | - | chr1_1:2289557-2289576 | None:intergenic | 20.0% |
| !!! | TTTTTTATAGTATTTTCTGC+TGG | - | chr1_1:2289946-2289965 | None:intergenic | 20.0% |
| !!! | ATTTTGAGTGAATTTTTTGT+CGG | + | chr1_1:2290204-2290223 | Msa0000890:intron | 20.0% |
| !! | CTGCATTCAAAATATAAAAA+TGG | - | chr1_1:2290405-2290424 | None:intergenic | 20.0% |
| !! | TTAATAAATCATGACATGTT+TGG | + | chr1_1:2290483-2290502 | Msa0000890:intron | 20.0% |
| !!! | TCTAGTGATTTTGTAAAATA+TGG | + | chr1_1:2290667-2290686 | Msa0000890:intron | 20.0% |
| !!! | AAGAGAATCATCTTTTATTT+TGG | + | chr1_1:2290803-2290822 | Msa0000890:intron | 20.0% |
| !!! | ATGTCTTCAATAATTTTCTT+AGG | - | chr1_1:2290938-2290957 | None:intergenic | 20.0% |
| !!! | ACTTATCAACATTTTTTGTT+TGG | + | chr1_1:2291001-2291020 | Msa0000890:intron | 20.0% |
| !! | CATATTATGCTATCTTTATT+AGG | - | chr1_1:2291708-2291727 | None:intergenic | 20.0% |
| !! | TGTAAAAAAAAAAAAAACGG+GGG | - | chr1_1:2291914-2291933 | None:intergenic | 20.0% |
| !! | ATTGTGTTTAATTCCTTAAA+AGG | - | chr1_1:2292001-2292020 | None:intergenic | 20.0% |
| !! | ATTGAATATGTAGTAATTCT+AGG | + | chr1_1:2292387-2292406 | Msa0000890:intron | 20.0% |
| !! | AAAAAGAATCGTGTATTTAA+TGG | + | chr1_1:2292468-2292487 | Msa0000890:intron | 20.0% |
| !!! | TGGTTTTTGTAGAAAAAAAA+AGG | + | chr1_1:2292626-2292645 | Msa0000890:intron | 20.0% |
| !!! | GGTTTTTGTAGAAAAAAAAA+GGG | + | chr1_1:2292627-2292646 | Msa0000890:intron | 20.0% |
| !!! | GTTTTTGTAGAAAAAAAAAG+GGG | + | chr1_1:2292628-2292647 | Msa0000890:intron | 20.0% |
| !!! | TTTTTGTAGAAAAAAAAAGG+GGG | + | chr1_1:2292629-2292648 | Msa0000890:intron | 20.0% |
| !! | TCAATGTTTGAATTAATCAA+TGG | + | chr1_1:2292938-2292957 | Msa0000890:intron | 20.0% |
| !!! | TTGATGATTTCATAATAATC+AGG | - | chr1_1:2293354-2293373 | None:intergenic | 20.0% |
| !!! | ATGATATTATTTTGAATCCA+TGG | + | chr1_1:2293465-2293484 | Msa0000890:intron | 20.0% |
| !! | ATAATTCTCTTGTATGAAAT+CGG | + | chr1_1:2293619-2293638 | Msa0000890:intron | 20.0% |
| !! | CATTTGTAATATATTGTTTC+TGG | - | chr1_1:2293829-2293848 | None:intergenic | 20.0% |
| ! | ACAGTTTACTTAAAGTTGTT+AGG | + | chr1_1:2283859-2283878 | Msa0000890:intron | 25.0% |
| !! | TGGATCAAACAATTAACTTT+TGG | + | chr1_1:2284380-2284399 | Msa0000890:intron | 25.0% |
| !! | GGATCAAACAATTAACTTTT+GGG | + | chr1_1:2284381-2284400 | Msa0000890:intron | 25.0% |
| !! | GATCAAACAATTAACTTTTG+GGG | + | chr1_1:2284382-2284401 | Msa0000890:intron | 25.0% |
| !! | GATGCGAAGTATATATTTTA+AGG | + | chr1_1:2284639-2284658 | Msa0000890:intron | 25.0% |
| ! | GCTAATAGGTATTATGTTAT+AGG | - | chr1_1:2284817-2284836 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTGAATGGCTAAT+AGG | - | chr1_1:2284831-2284850 | None:intergenic | 25.0% |
| ! | ATGCAACATGAACTTATATT+AGG | + | chr1_1:2284924-2284943 | Msa0000890:intron | 25.0% |
| !!! | AACTCAAGACAATTTTTTAG+TGG | + | chr1_1:2285009-2285028 | Msa0000890:intron | 25.0% |
| !!! | ACTCAAGACAATTTTTTAGT+GGG | + | chr1_1:2285010-2285029 | Msa0000890:intron | 25.0% |
| ! | TGAGTACTTAAAAAGATTGT+GGG | - | chr1_1:2285183-2285202 | None:intergenic | 25.0% |
| ! | ATGAGTACTTAAAAAGATTG+TGG | - | chr1_1:2285184-2285203 | None:intergenic | 25.0% |
| !!! | CTTTTTAATAAGGTTTTGTG+GGG | - | chr1_1:2285311-2285330 | None:intergenic | 25.0% |
| !!! | GCTTTTTAATAAGGTTTTGT+GGG | - | chr1_1:2285312-2285331 | None:intergenic | 25.0% |
| !!! | TGCTTTTTAATAAGGTTTTG+TGG | - | chr1_1:2285313-2285332 | None:intergenic | 25.0% |
| !! | TTTTCTTCATTAGTAACAAC+TGG | + | chr1_1:2285399-2285418 | Msa0000890:intron | 25.0% |
| ! | TTTCTTCATTAGTAACAACT+GGG | + | chr1_1:2285400-2285419 | Msa0000890:intron | 25.0% |
| !!! | GTTTTTTCCTGTTGTTTTTA+TGG | + | chr1_1:2285547-2285566 | Msa0000890:intron | 25.0% |
| !! | AGAGTATTTGAAACTTGATA+CGG | + | chr1_1:2285738-2285757 | Msa0000890:intron | 25.0% |
| ! | CCTACAAATTTACCATAAAA+AGG | - | chr1_1:2286066-2286085 | None:intergenic | 25.0% |
| !! | CCTTTTTATGGTAAATTTGT+AGG | + | chr1_1:2286063-2286082 | Msa0000890:intron | 25.0% |
| ! | TTATAACCATTACAGACTTA+TGG | - | chr1_1:2286091-2286110 | None:intergenic | 25.0% |
| ! | ATAAGTCTGTAATGGTTATA+AGG | + | chr1_1:2286090-2286109 | Msa0000890:CDS | 25.0% |
| !!! | TATGTTTTTATCTACCTTTC+AGG | + | chr1_1:2286172-2286191 | Msa0000890:intron | 25.0% |
| !! | TACTGTAAACATTTTGTTCT+CGG | - | chr1_1:2286406-2286425 | None:intergenic | 25.0% |
| !! | ATTATCACCGGTTATTAAAA+AGG | + | chr1_1:2286435-2286454 | Msa0000890:intron | 25.0% |
| !! | ACAACATATATTTAGAGCTT+GGG | - | chr1_1:2286600-2286619 | None:intergenic | 25.0% |
| ! | TATAGAAAAAATAAGTAGGC+AGG | - | chr1_1:2286650-2286669 | None:intergenic | 25.0% |
| !!! | AGTAAAATTTTTTTAGTCGG+GGG | - | chr1_1:2286687-2286706 | None:intergenic | 25.0% |
| !!! | TTTTAAGTGATTCATCAATC+TGG | - | chr1_1:2286832-2286851 | None:intergenic | 25.0% |
| ! | CAGGAAAAACAATAAAAGTA+AGG | + | chr1_1:2287090-2287109 | Msa0000890:intron | 25.0% |
| !! | TATTGCTATTATGGAGTAAA+AGG | + | chr1_1:2287430-2287449 | Msa0000890:intron | 25.0% |
| !!! | GGTTTTTTTTATCCCAAATT+AGG | - | chr1_1:2287540-2287559 | None:intergenic | 25.0% |
| ! | GAAATAGAAAGAACAAGATA+TGG | - | chr1_1:2287892-2287911 | None:intergenic | 25.0% |
| ! | AAACCTTATGTTGAATTAAC+CGG | + | chr1_1:2287973-2287992 | Msa0000890:intron | 25.0% |
| !!! | TGTTGTTTGATTGTATTTTC+AGG | + | chr1_1:2288025-2288044 | Msa0000890:intron | 25.0% |
| !! | GTTGTTTGATTGTATTTTCA+GGG | + | chr1_1:2288026-2288045 | Msa0000890:intron | 25.0% |
| ! | AAATCATGAAATGAATGTGT+GGG | - | chr1_1:2288141-2288160 | None:intergenic | 25.0% |
| ! | AAAATCATGAAATGAATGTG+TGG | - | chr1_1:2288142-2288161 | None:intergenic | 25.0% |
| ! | ATAACTTCATTTAGTTGTTG+AGG | + | chr1_1:2288227-2288246 | Msa0000890:intron | 25.0% |
| ! | TAACTTCATTTAGTTGTTGA+GGG | + | chr1_1:2288228-2288247 | Msa0000890:intron | 25.0% |
| ! | TGATGCACTATTTAGTTAAA+TGG | + | chr1_1:2288335-2288354 | Msa0000890:intron | 25.0% |
| !! | TTGTCATTTCAGTTACATAA+AGG | + | chr1_1:2288400-2288419 | Msa0000890:intron | 25.0% |
| ! | AGTTACATAAAGGATTATGA+TGG | + | chr1_1:2288410-2288429 | Msa0000890:intron | 25.0% |
| ! | GTTACATAAAGGATTATGAT+GGG | + | chr1_1:2288411-2288430 | Msa0000890:intron | 25.0% |
| ! | TTACATAAAGGATTATGATG+GGG | + | chr1_1:2288412-2288431 | Msa0000890:CDS | 25.0% |
| !!! | ATAGTTGATAAATCAGTGTA+AGG | - | chr1_1:2288473-2288492 | None:intergenic | 25.0% |
| !! | TTTTGATCTTCAACATTGTA+AGG | - | chr1_1:2289094-2289113 | None:intergenic | 25.0% |
| ! | CTATAAAATTGTATTGGAGA+AGG | - | chr1_1:2289558-2289577 | None:intergenic | 25.0% |
| ! | TAGAAAAATGATATCTCTCA+AGG | - | chr1_1:2289756-2289775 | None:intergenic | 25.0% |
| !!! | TATCATTTTTCTACGATTTG+AGG | + | chr1_1:2289763-2289782 | Msa0000890:intron | 25.0% |
| !! | TTAGAACTTTTACATCATCT+AGG | - | chr1_1:2289889-2289908 | None:intergenic | 25.0% |
| ! | TAAAAAAGAAAGATGTTGAC+AGG | + | chr1_1:2289959-2289978 | Msa0000890:intron | 25.0% |
| ! | AAAAAAGAAAGATGTTGACA+GGG | + | chr1_1:2289960-2289979 | Msa0000890:intron | 25.0% |
| ! | GTTTCTATATGATGTATAGT+TGG | + | chr1_1:2290329-2290348 | Msa0000890:intron | 25.0% |
| ! | ATGTCATGATTTATTAAGAG+TGG | - | chr1_1:2290480-2290499 | None:intergenic | 25.0% |
| ! | ACATGTTTGGTTATTATTGT+TGG | + | chr1_1:2290496-2290515 | Msa0000890:intron | 25.0% |
| !! | TTATTGTTGGTTGTAATTGT+AGG | + | chr1_1:2290509-2290528 | Msa0000890:intron | 25.0% |
| ! | TTTACAAAATCACTAGACAT+GGG | - | chr1_1:2290664-2290683 | None:intergenic | 25.0% |
| !! | TTTTACAAAATCACTAGACA+TGG | - | chr1_1:2290665-2290684 | None:intergenic | 25.0% |
| ! | CTTACTCATTGTTAATGTTA+AGG | - | chr1_1:2290776-2290795 | None:intergenic | 25.0% |
| ! | CTTAACATTAACAATGAGTA+AGG | + | chr1_1:2290774-2290793 | Msa0000890:intron | 25.0% |
| ! | TAAGTAGTTACACAGAAATT+GGG | - | chr1_1:2290986-2291005 | None:intergenic | 25.0% |
| ! | ATAAGTAGTTACACAGAAAT+TGG | - | chr1_1:2290987-2291006 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTTTGGTTTCTGT+GGG | + | chr1_1:2291011-2291030 | Msa0000890:intron | 25.0% |
| ! | CATTAAGAATCAAAAAGGTT+TGG | - | chr1_1:2291171-2291190 | None:intergenic | 25.0% |
| ! | ATCAGCATTAAGAATCAAAA+AGG | - | chr1_1:2291176-2291195 | None:intergenic | 25.0% |
| !! | ATCATCATAGATTTTGTGTA+CGG | + | chr1_1:2291263-2291282 | Msa0000890:intron | 25.0% |
| !!! | TATGAAACTTTTGCCATTTT+TGG | + | chr1_1:2291378-2291397 | Msa0000890:intron | 25.0% |
| ! | TTGTTTGGATGTTTCATTAA+AGG | + | chr1_1:2291446-2291465 | Msa0000890:intron | 25.0% |
| ! | CTCTCATATTTCTTCATTTA+TGG | - | chr1_1:2292057-2292076 | None:intergenic | 25.0% |
| !! | TTTTGTAGAAAAAAAAAGGG+GGG | + | chr1_1:2292630-2292649 | Msa0000890:intron | 25.0% |
| ! | TAATATGTTTGTTCATCAAC+TGG | + | chr1_1:2292835-2292854 | Msa0000890:intron | 25.0% |
| ! | AATATGTTTGTTCATCAACT+GGG | + | chr1_1:2292836-2292855 | Msa0000890:intron | 25.0% |
| ! | AAGAAAACCATTCATTCATA+AGG | - | chr1_1:2292890-2292909 | None:intergenic | 25.0% |
| ! | GATTAATTCAAACATTGATC+AGG | - | chr1_1:2292936-2292955 | None:intergenic | 25.0% |
| ! | GATACATAAATCCATATTCA+TGG | + | chr1_1:2293185-2293204 | Msa0000890:intron | 25.0% |
| !!! | TTTCAGACATATTTTAAGGA+GGG | - | chr1_1:2293216-2293235 | None:intergenic | 25.0% |
| !!! | TTATTTTGAATCCATGGATT+TGG | + | chr1_1:2293471-2293490 | Msa0000890:intron | 25.0% |
| ! | TTTCATACAAGAGAATTATG+TGG | - | chr1_1:2293618-2293637 | None:intergenic | 25.0% |
| ! | TTCACACACATGTTATATAA+TGG | - | chr1_1:2293664-2293683 | None:intergenic | 25.0% |
| !!! | TATTGTTTCTGGAGAATTAT+AGG | - | chr1_1:2293818-2293837 | None:intergenic | 25.0% |
| ! | TATATTACAAATGTGCTACA+AGG | + | chr1_1:2293836-2293855 | Msa0000890:intron | 25.0% |
| ! | CATGAAGAAAAATAAACAGA+AGG | - | chr1_1:2293875-2293894 | None:intergenic | 25.0% |
| ! | TCTAAATATAACAGTATGCA+TGG | - | chr1_1:2294035-2294054 | None:intergenic | 25.0% |
| TAAAGTTGTTAGGAACTGTT+TGG | + | chr1_1:2283869-2283888 | Msa0000890:intron | 30.0% | |
| AAGCGTTATGTATAACCTTA+CGG | - | chr1_1:2284077-2284096 | None:intergenic | 30.0% | |
| TATTGTACAAGTGCTTATCA+TGG | - | chr1_1:2284101-2284120 | None:intergenic | 30.0% | |
| AATAAGCTGTTTATCTAACC+AGG | + | chr1_1:2284117-2284136 | Msa0000890:intron | 30.0% | |
| TTTATATAAAACTATGGGCC+TGG | - | chr1_1:2284138-2284157 | None:intergenic | 30.0% | |
| ! | GAGATTGTATTGTCTTTTTC+AGG | + | chr1_1:2284203-2284222 | Msa0000890:intron | 30.0% |
| TTTACATGTCTGTCAAATGA+TGG | + | chr1_1:2284246-2284265 | Msa0000890:CDS | 30.0% | |
| TTTACATGATTGCTAGTAAG+CGG | + | chr1_1:2284354-2284373 | Msa0000890:intron | 30.0% | |
| !! | AAACAATTAACTTTTGGGGA+GGG | + | chr1_1:2284386-2284405 | Msa0000890:intron | 30.0% |
| CGATTACATCTTTAAATTGC+TGG | - | chr1_1:2284443-2284462 | None:intergenic | 30.0% | |
| AATTTGAAGAACCAATGTGA+TGG | + | chr1_1:2284564-2284583 | Msa0000890:intron | 30.0% | |
| ATATATACTTCGCATCACAT+TGG | - | chr1_1:2284635-2284654 | None:intergenic | 30.0% | |
| ! | TCATACCGTTTTCAAAGTTT+AGG | + | chr1_1:2284726-2284745 | Msa0000890:intron | 30.0% |
| ! | ACATAAATTAGGAGTATGCT+CGG | - | chr1_1:2284769-2284788 | None:intergenic | 30.0% |
| AAGAATGTAGCAGACTAAAA+TGG | - | chr1_1:2284978-2284997 | None:intergenic | 30.0% | |
| ATCATACTTTCTTACTCACA+CGG | + | chr1_1:2285202-2285221 | Msa0000890:intron | 30.0% | |
| ! | AGTTCTAATTAATTGCGAAG+TGG | + | chr1_1:2285513-2285532 | Msa0000890:intron | 30.0% |
| TAGTTTCTTATTGCTTGGTA+TGG | - | chr1_1:2285592-2285611 | None:intergenic | 30.0% | |
| ATACCAAGCAATAAGAAACT+AGG | + | chr1_1:2285591-2285610 | Msa0000890:intron | 30.0% | |
| ATTCCTAGTTTCTTATTGCT+TGG | - | chr1_1:2285597-2285616 | None:intergenic | 30.0% | |
| CTTTACGTAATTCATACTTG+TGG | + | chr1_1:2285673-2285692 | Msa0000890:intron | 30.0% | |
| ! | AAAAGTTCTATTTTGCATGC+AGG | + | chr1_1:2285930-2285949 | Msa0000890:intron | 30.0% |
| ACGAATTATTACCTTGCATA+TGG | - | chr1_1:2286149-2286168 | None:intergenic | 30.0% | |
| ATAGATATAAAAGGGTAACC+CGG | - | chr1_1:2286338-2286357 | None:intergenic | 30.0% | |
| GTAATAGTAGTCATTATCAC+CGG | + | chr1_1:2286423-2286442 | Msa0000890:intron | 30.0% | |
| ! | CAGTTGACCTTTTTAATAAC+CGG | - | chr1_1:2286445-2286464 | None:intergenic | 30.0% |
| CATGATAAAAATGCTTCTCA+AGG | + | chr1_1:2286519-2286538 | Msa0000890:intron | 30.0% | |
| TCCATATAAGTTAACAGTCT+GGG | + | chr1_1:2286542-2286561 | Msa0000890:intron | 30.0% | |
| ! | CACAACATATATTTAGAGCT+TGG | - | chr1_1:2286601-2286620 | None:intergenic | 30.0% |
| ATTAATACTGTTGTGCACTA+TGG | + | chr1_1:2286734-2286753 | Msa0000890:intron | 30.0% | |
| ATATCCAACAGCATTATTGT+CGG | - | chr1_1:2286901-2286920 | None:intergenic | 30.0% | |
| TGTTGGATATTTCATCAAAC+AGG | + | chr1_1:2286911-2286930 | Msa0000890:CDS | 30.0% | |
| GATATTTCATCAAACAGGTT+TGG | + | chr1_1:2286916-2286935 | Msa0000890:intron | 30.0% | |
| ! | TGCATATTTCTAACATGTGT+AGG | + | chr1_1:2287304-2287323 | Msa0000890:intron | 30.0% |
| GCAATAATTTGGGAAATTGT+TGG | + | chr1_1:2287470-2287489 | Msa0000890:intron | 30.0% | |
| TCTCTTATCAGACAGAAAAA+TGG | - | chr1_1:2287561-2287580 | None:intergenic | 30.0% | |
| AATTCCAATAGAGATACATC+TGG | + | chr1_1:2287624-2287643 | Msa0000890:intron | 30.0% | |
| AAATCCAGATGTATCTCTAT+TGG | - | chr1_1:2287631-2287650 | None:intergenic | 30.0% | |
| AACTTAACCAGGAAATATAC+TGG | - | chr1_1:2287808-2287827 | None:intergenic | 30.0% | |
| TATCCGGTTAATTCAACATA+AGG | - | chr1_1:2287979-2287998 | None:intergenic | 30.0% | |
| GTAAAATGTAAAGCAGTATC+CGG | - | chr1_1:2287995-2288014 | None:intergenic | 30.0% | |
| !!! | GGTTTTAAAGTACAATTGCA+GGG | + | chr1_1:2288256-2288275 | Msa0000890:intron | 30.0% |
| TACATAAAGGATTATGATGG+GGG | + | chr1_1:2288413-2288432 | Msa0000890:CDS | 30.0% | |
| !! | TTTTGGGTAGATAGATGAAA+TGG | + | chr1_1:2288693-2288712 | Msa0000890:intron | 30.0% |
| CTTTGAATAGGAGTAACAAA+AGG | + | chr1_1:2289187-2289206 | Msa0000890:intron | 30.0% | |
| GGGGAACTATAAAATTGTAT+TGG | - | chr1_1:2289564-2289583 | None:intergenic | 30.0% | |
| TGGAAGAAATAGAGGAAAAT+GGG | - | chr1_1:2289643-2289662 | None:intergenic | 30.0% | |
| AAGTTATTGGAGTGGTTATT+TGG | - | chr1_1:2290035-2290054 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTTACATGTGTAGC+TGG | + | chr1_1:2290270-2290289 | Msa0000890:intron | 30.0% |
| AATTGTCACATTGTTTATCC+TGG | + | chr1_1:2290561-2290580 | Msa0000890:CDS | 30.0% | |
| GAAAACATCAAATTCTAGAC+AGG | - | chr1_1:2290641-2290660 | None:intergenic | 30.0% | |
| TTACAAAATCACTAGACATG+GGG | - | chr1_1:2290663-2290682 | None:intergenic | 30.0% | |
| AAAATTATTGAAGACATCCC+TGG | + | chr1_1:2290941-2290960 | Msa0000890:CDS | 30.0% | |
| TAAAGTACGTACTTAAACCA+GGG | - | chr1_1:2290961-2290980 | None:intergenic | 30.0% | |
| ATAAAGTACGTACTTAAACC+AGG | - | chr1_1:2290962-2290981 | None:intergenic | 30.0% | |
| !!! | CATTTTTTGTTTGGTTTCTG+TGG | + | chr1_1:2291010-2291029 | Msa0000890:intron | 30.0% |
| !!! | TAAGAAACTAATGCCGTTTT+TGG | + | chr1_1:2291310-2291329 | Msa0000890:intron | 30.0% |
| !!! | GGTGTTATTTTGTTGTTGTT+TGG | + | chr1_1:2291431-2291450 | Msa0000890:intron | 30.0% |
| TTTGGATGTTTCATTAAAGG+AGG | + | chr1_1:2291449-2291468 | Msa0000890:intron | 30.0% | |
| TTGGATGTTTCATTAAAGGA+GGG | + | chr1_1:2291450-2291469 | Msa0000890:intron | 30.0% | |
| !! | AACTCTCTTTTACCTTGTTT+GGG | + | chr1_1:2291474-2291493 | Msa0000890:intron | 30.0% |
| !!! | CTAATTTTAGTTCCCAAACA+AGG | - | chr1_1:2291489-2291508 | None:intergenic | 30.0% |
| TGTTTGGGAACTAAAATTAG+AGG | + | chr1_1:2291489-2291508 | Msa0000890:intron | 30.0% | |
| GTTTGGGAACTAAAATTAGA+GGG | + | chr1_1:2291490-2291509 | Msa0000890:intron | 30.0% | |
| TGCTATCTTTATTAGGAGTA+GGG | - | chr1_1:2291701-2291720 | None:intergenic | 30.0% | |
| ATGCTATCTTTATTAGGAGT+AGG | - | chr1_1:2291702-2291721 | None:intergenic | 30.0% | |
| CTGCAAATAATATCTGCAAT+CGG | + | chr1_1:2292088-2292107 | Msa0000890:intron | 30.0% | |
| TTCATTCATAAGGATGCAAT+GGG | - | chr1_1:2292880-2292899 | None:intergenic | 30.0% | |
| ATTCATTCATAAGGATGCAA+TGG | - | chr1_1:2292881-2292900 | None:intergenic | 30.0% | |
| ATTGCATCCTTATGAATGAA+TGG | + | chr1_1:2292880-2292899 | Msa0000890:intron | 30.0% | |
| ATTTATGCGTACACTTCTAA+AGG | + | chr1_1:2293075-2293094 | Msa0000890:CDS | 30.0% | |
| ATGAATGAAAATTTGAGTCG+AGG | - | chr1_1:2293120-2293139 | None:intergenic | 30.0% | |
| !! | CTTTCAGACATATTTTAAGG+AGG | - | chr1_1:2293217-2293236 | None:intergenic | 30.0% |
| ! | CTGCTTTCAGACATATTTTA+AGG | - | chr1_1:2293220-2293239 | None:intergenic | 30.0% |
| TGAAATCATCAAAGATCCAA+TGG | + | chr1_1:2293362-2293381 | Msa0000890:CDS | 30.0% | |
| GAAATCATCAAAGATCCAAT+GGG | + | chr1_1:2293363-2293382 | Msa0000890:CDS | 30.0% | |
| ! | AAAGAATGTTTTCGAATGCA+CGG | + | chr1_1:2293791-2293810 | Msa0000890:intron | 30.0% |
| ! | GTATTCTTGTATTCTTTTGC+AGG | + | chr1_1:2293932-2293951 | Msa0000890:intron | 30.0% |
| CATAGCATCAGAAAAAACTT+TGG | - | chr1_1:2294123-2294142 | None:intergenic | 30.0% | |
| !!! | AGTTTTTTCTGATGCTATGT+AGG | + | chr1_1:2294124-2294143 | Msa0000890:three_prime_UTR | 30.0% |
| !!! | GTTTTTTCTGATGCTATGTA+GGG | + | chr1_1:2294125-2294144 | Msa0000890:three_prime_UTR | 30.0% |
| AAGAGAGTAAAACCCTAAGA+TGG | + | chr1_1:2283103-2283122 | Msa0000890:exon | 35.0% | |
| GTTAAGATCGAACAATCTGA+TGG | + | chr1_1:2283503-2283522 | Msa0000890:CDS | 35.0% | |
| ACTGAAAATTTGCAGACTAG+TGG | + | chr1_1:2283620-2283639 | Msa0000890:CDS | 35.0% | |
| !! | GCTGTTTTCATAAGCAATCT+TGG | - | chr1_1:2283997-2284016 | None:intergenic | 35.0% |
| CAACAACAATAACTTCCGTA+AGG | + | chr1_1:2284059-2284078 | Msa0000890:intron | 35.0% | |
| ! | ACAAACTAGTTTGAGCTTTG+AGG | + | chr1_1:2284163-2284182 | Msa0000890:intron | 35.0% |
| !!! | TGTCTTTTTCAGGAAGAAAC+TGG | + | chr1_1:2284213-2284232 | Msa0000890:intron | 35.0% |
| TGTTATACCAAACCATATGC+TGG | - | chr1_1:2284278-2284297 | None:intergenic | 35.0% | |
| TTACATGATTGCTAGTAAGC+GGG | + | chr1_1:2284355-2284374 | Msa0000890:intron | 35.0% | |
| !! | CAAACAATTAACTTTTGGGG+AGG | + | chr1_1:2284385-2284404 | Msa0000890:intron | 35.0% |
| ! | CACAGCCTAAACTTTGAAAA+CGG | - | chr1_1:2284734-2284753 | None:intergenic | 35.0% |
| CATGAACTTATATTAGGCCA+AGG | + | chr1_1:2284930-2284949 | Msa0000890:intron | 35.0% | |
| AGACTAAAATGGATGCAATG+GGG | - | chr1_1:2284967-2284986 | None:intergenic | 35.0% | |
| CAGACTAAAATGGATGCAAT+GGG | - | chr1_1:2284968-2284987 | None:intergenic | 35.0% | |
| GCAAATAACAATGGCAAGAA+TGG | - | chr1_1:2285061-2285080 | None:intergenic | 35.0% | |
| TGGAGCAAAGCAAATAACAA+TGG | - | chr1_1:2285070-2285089 | None:intergenic | 35.0% | |
| ! | TGTTATTTGCTTTGCTCCAT+AGG | + | chr1_1:2285071-2285090 | Msa0000890:intron | 35.0% |
| TCTTCAATCCTATCAACCTA+TGG | - | chr1_1:2285090-2285109 | None:intergenic | 35.0% | |
| ATTACCTATCCATAACAAGC+CGG | - | chr1_1:2285159-2285178 | None:intergenic | 35.0% | |
| GTCTGGGTATGATACATATT+TGG | + | chr1_1:2285236-2285255 | Msa0000890:intron | 35.0% | |
| !!! | TTGACCAATGCGTTTTAGTT+TGG | + | chr1_1:2285368-2285387 | Msa0000890:intron | 35.0% |
| CATTCCAAACTAAAACGCAT+TGG | - | chr1_1:2285375-2285394 | None:intergenic | 35.0% | |
| AGTTTAGATGGGTAGAGAAA+GGG | - | chr1_1:2285453-2285472 | None:intergenic | 35.0% | |
| TAGTTTAGATGGGTAGAGAA+AGG | - | chr1_1:2285454-2285473 | None:intergenic | 35.0% | |
| TTTCTCTACCCATCTAAACT+AGG | + | chr1_1:2285453-2285472 | Msa0000890:intron | 35.0% | |
| TATGGGATCCTAGTTTAGAT+GGG | - | chr1_1:2285464-2285483 | None:intergenic | 35.0% | |
| TTATGGGATCCTAGTTTAGA+TGG | - | chr1_1:2285465-2285484 | None:intergenic | 35.0% | |
| TGGGAAACCATAAAAACAAC+AGG | - | chr1_1:2285557-2285576 | None:intergenic | 35.0% | |
| ! | GTATTTGAAACTTGATACGG+AGG | + | chr1_1:2285741-2285760 | Msa0000890:intron | 35.0% |
| !!! | TTTTGCATGCAGGATTAGTT+CGG | + | chr1_1:2285940-2285959 | Msa0000890:intron | 35.0% |
| !!! | ATTTTTTTCCTCTGCTACTC+TGG | + | chr1_1:2286008-2286027 | Msa0000890:intron | 35.0% |
| TTACATATCGTCCATATGCA+AGG | + | chr1_1:2286135-2286154 | Msa0000890:CDS | 35.0% | |
| GTCCATATAAGTTAACAGTC+TGG | + | chr1_1:2286541-2286560 | Msa0000890:intron | 35.0% | |
| TCCCAGACTGTTAACTTATA+TGG | - | chr1_1:2286546-2286565 | None:intergenic | 35.0% | |
| !!! | AAATTTTTTTAGTCGGGGGT+GGG | - | chr1_1:2286683-2286702 | None:intergenic | 35.0% |
| !!! | AAAATTTTTTTAGTCGGGGG+TGG | - | chr1_1:2286684-2286703 | None:intergenic | 35.0% |
| ! | GATAGCCTTTTGTGCAATTA+CGG | + | chr1_1:2286779-2286798 | Msa0000890:CDS | 35.0% |
| TATGGAGTAAAAGGATGATG+TGG | + | chr1_1:2287439-2287458 | Msa0000890:intron | 35.0% | |
| TAAAAGGATGATGTGGCTAA+AGG | + | chr1_1:2287446-2287465 | Msa0000890:intron | 35.0% | |
| TGGCTAAAGGAGCAATAATT+TGG | + | chr1_1:2287459-2287478 | Msa0000890:intron | 35.0% | |
| GGCTAAAGGAGCAATAATTT+GGG | + | chr1_1:2287460-2287479 | Msa0000890:intron | 35.0% | |
| ! | TGTCTGACAAATTTTCTTCG+TGG | + | chr1_1:2287584-2287603 | Msa0000890:intron | 35.0% |
| ! | ATTTTCTTCGTGGTTCTTGA+TGG | + | chr1_1:2287594-2287613 | Msa0000890:intron | 35.0% |
| ! | TACATCTGGATTTTACTAGC+TGG | + | chr1_1:2287638-2287657 | Msa0000890:intron | 35.0% |
| !!! | GAACCTTCTTTTTTGCTTCT+TGG | + | chr1_1:2287736-2287755 | Msa0000890:intron | 35.0% |
| ATTTCCTGGTTAAGTTTGTC+AGG | + | chr1_1:2287812-2287831 | Msa0000890:intron | 35.0% | |
| AATTCCTGACAAACTTAACC+AGG | - | chr1_1:2287819-2287838 | None:intergenic | 35.0% | |
| GGTTAAGTTTGTCAGGAATT+TGG | + | chr1_1:2287819-2287838 | Msa0000890:intron | 35.0% | |
| ! | AGAAGCATAATTTCACTGCA+TGG | + | chr1_1:2287849-2287868 | Msa0000890:intron | 35.0% |
| !!! | GGGTTTTAAAGTACAATTGC+AGG | + | chr1_1:2288255-2288274 | Msa0000890:intron | 35.0% |
| AAATCAGTGTAAGGAAGCTT+TGG | - | chr1_1:2288464-2288483 | None:intergenic | 35.0% | |
| GATGAAATGGTAATAGCCAT+TGG | + | chr1_1:2288706-2288725 | Msa0000890:intron | 35.0% | |
| GCAAAAATGCCGAAATTTCT+AGG | - | chr1_1:2288788-2288807 | None:intergenic | 35.0% | |
| TTACGATCTCTGTCACATTA+AGG | + | chr1_1:2288968-2288987 | Msa0000890:intron | 35.0% | |
| GTTGCAAGATCGTAAAACAT+AGG | - | chr1_1:2288995-2289014 | None:intergenic | 35.0% | |
| ! | GCTTTATTGCTCTTGTACTA+TGG | - | chr1_1:2289295-2289314 | None:intergenic | 35.0% |
| ATCACAAAACTCGAATCCTA+AGG | + | chr1_1:2289325-2289344 | Msa0000890:intron | 35.0% | |
| GTGGAAAATTTGAGGGAAAA+TGG | + | chr1_1:2289394-2289413 | Msa0000890:intron | 35.0% | |
| ! | ATTGTATTGGAGAAGGGTTT+TGG | - | chr1_1:2289551-2289570 | None:intergenic | 35.0% |
| ! | TTTTATAGTTCCCCCAAATG+AGG | + | chr1_1:2289570-2289589 | Msa0000890:intron | 35.0% |
| ATACAAAACCCTCCTCATTT+GGG | - | chr1_1:2289585-2289604 | None:intergenic | 35.0% | |
| AATACAAAACCCTCCTCATT+TGG | - | chr1_1:2289586-2289605 | None:intergenic | 35.0% | |
| AGAAATAGAGGAAAATGGGA+GGG | - | chr1_1:2289639-2289658 | None:intergenic | 35.0% | |
| AAGAAATAGAGGAAAATGGG+AGG | - | chr1_1:2289640-2289659 | None:intergenic | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | - | chr1_1:2289644-2289663 | None:intergenic | 35.0% | |
| ! | TTTTCTACGATTTGAGGATG+AGG | + | chr1_1:2289769-2289788 | Msa0000890:intron | 35.0% |
| TGTCTTGATTCTCCAAGAAT+TGG | + | chr1_1:2289993-2290012 | Msa0000890:intron | 35.0% | |
| TATTGGAGTGGTTATTTGGA+GGG | - | chr1_1:2290031-2290050 | None:intergenic | 35.0% | |
| TTATTGGAGTGGTTATTTGG+AGG | - | chr1_1:2290032-2290051 | None:intergenic | 35.0% | |
| ATTGGCTATTGGGAAGTTAT+TGG | - | chr1_1:2290048-2290067 | None:intergenic | 35.0% | |
| AGTAATCAATTGACCAGACA+GGG | - | chr1_1:2290076-2290095 | None:intergenic | 35.0% | |
| AAGTAATCAATTGACCAGAC+AGG | - | chr1_1:2290077-2290096 | None:intergenic | 35.0% | |
| TCACAATATTAAAGCAGACC+AGG | - | chr1_1:2290132-2290151 | None:intergenic | 35.0% | |
| !!! | AATTTTTTGTCGGTCTTGTC+TGG | + | chr1_1:2290214-2290233 | Msa0000890:intron | 35.0% |
| !! | ATCGATTTTCAGAAGGTATG+TGG | + | chr1_1:2290585-2290604 | Msa0000890:intron | 35.0% |
| TTCTGCATATTGTGTCAATC+AGG | - | chr1_1:2290902-2290921 | None:intergenic | 35.0% | |
| ! | TAAGGCCTTATAGATGAAAG+AGG | - | chr1_1:2291139-2291158 | None:intergenic | 35.0% |
| ! | CATCTATAAGGCCTTATGAA+TGG | + | chr1_1:2291143-2291162 | Msa0000890:intron | 35.0% |
| ! | AAGGTTTGGAACCATTCATA+AGG | - | chr1_1:2291157-2291176 | None:intergenic | 35.0% |
| AGAATCTATGCTTCTAGACA+TGG | - | chr1_1:2291222-2291241 | None:intergenic | 35.0% | |
| AGCTCAAGAACTTCCAAAAA+CGG | - | chr1_1:2291326-2291345 | None:intergenic | 35.0% | |
| !! | TTTTGGAAGTTCTTGAGCTA+AGG | + | chr1_1:2291327-2291346 | Msa0000890:intron | 35.0% |
| TTTGGAAGTTCTTGAGCTAA+GGG | + | chr1_1:2291328-2291347 | Msa0000890:intron | 35.0% | |
| GGCTCATGAAATTCCAAAAA+TGG | - | chr1_1:2291394-2291413 | None:intergenic | 35.0% | |
| !!! | TTTTGGAATTTCATGAGCCA+AGG | + | chr1_1:2291395-2291414 | Msa0000890:intron | 35.0% |
| ! | TTTGGAATTTCATGAGCCAA+GGG | + | chr1_1:2291396-2291415 | Msa0000890:intron | 35.0% |
| TGGATGTTTCATTAAAGGAG+GGG | + | chr1_1:2291451-2291470 | Msa0000890:intron | 35.0% | |
| ! | GAACTCTCTTTTACCTTGTT+TGG | + | chr1_1:2291473-2291492 | Msa0000890:intron | 35.0% |
| TCCTTTCTCCTTGAATTTCA+GGG | - | chr1_1:2291571-2291590 | None:intergenic | 35.0% | |
| ATCCTTTCTCCTTGAATTTC+AGG | - | chr1_1:2291572-2291591 | None:intergenic | 35.0% | |
| TGAAATTCAAGGAGAAAGGA+TGG | + | chr1_1:2291571-2291590 | Msa0000890:intron | 35.0% | |
| !!! | GAAGTTTTTTGCAGAGGAAA+GGG | - | chr1_1:2291637-2291656 | None:intergenic | 35.0% |
| !!! | TGATTGGAAGTTTTTTGCAG+AGG | - | chr1_1:2291643-2291662 | None:intergenic | 35.0% |
| GCTATCTTTATTAGGAGTAG+GGG | - | chr1_1:2291700-2291719 | None:intergenic | 35.0% | |
| TGTTGTTCACACATTGCATA+AGG | + | chr1_1:2291736-2291755 | Msa0000890:intron | 35.0% | |
| ! | AAATTACGTTTTTGCCCCTT+CGG | + | chr1_1:2291774-2291793 | Msa0000890:intron | 35.0% |
| ACTGCCGAATTATGAAACTT+CGG | + | chr1_1:2291803-2291822 | Msa0000890:intron | 35.0% | |
| ACTGCCGAAGTTTCATAATT+CGG | - | chr1_1:2291810-2291829 | None:intergenic | 35.0% | |
| TTAACTACCGAGGAAAACTT+CGG | + | chr1_1:2291829-2291848 | Msa0000890:intron | 35.0% | |
| ! | CCGAAGTTTTCAATTTTCCT+CGG | - | chr1_1:2292679-2292698 | None:intergenic | 35.0% |
| CCGAGGAAAATTGAAAACTT+CGG | + | chr1_1:2291862-2291881 | Msa0000890:intron | 35.0% | |
| AAAAAAAAAACGGGGGTTTG+AGG | - | chr1_1:2291907-2291926 | None:intergenic | 35.0% | |
| TATCTGCAATCGGTAGTTAA+TGG | + | chr1_1:2292098-2292117 | Msa0000890:intron | 35.0% | |
| CCGAGGAAAATTGAAAACTT+CGG | - | chr1_1:2291862-2291881 | None:intergenic | 35.0% | |
| ! | CCGAAGTTTTCAATTTTCCT+CGG | + | chr1_1:2292679-2292698 | Msa0000890:intron | 35.0% |
| TTAACTACCGAGGAAAACTT+CGG | - | chr1_1:2291829-2291848 | None:intergenic | 35.0% | |
| TAACTGCCGAATTATGAAAC+CGG | - | chr1_1:2291801-2291820 | None:intergenic | 35.0% | |
| AATGGTTGAATGCCAATAAC+AGG | + | chr1_1:2292956-2292975 | Msa0000890:intron | 35.0% | |
| TGAAAGCAGAATAGTTACAC+TGG | + | chr1_1:2293231-2293250 | Msa0000890:intron | 35.0% | |
| !! | CTGCTTTTGCTATCTGTTAT+TGG | + | chr1_1:2293441-2293460 | Msa0000890:intron | 35.0% |
| TTCAGATCTGTGCTCAAATT+AGG | - | chr1_1:2293703-2293722 | None:intergenic | 35.0% | |
| ATCTGAAGACAATGAGTAAG+AGG | + | chr1_1:2293716-2293735 | Msa0000890:CDS | 35.0% | |
| TCTGAAGACAATGAGTAAGA+GGG | + | chr1_1:2293717-2293736 | Msa0000890:CDS | 35.0% | |
| ! | CACATTTGAGATGTTTGTTG+AGG | + | chr1_1:2293762-2293781 | Msa0000890:intron | 35.0% |
| TACATGGCTGATTGATCATT+GGG | - | chr1_1:2294080-2294099 | None:intergenic | 35.0% | |
| TTACATGGCTGATTGATCAT+TGG | - | chr1_1:2294081-2294100 | None:intergenic | 35.0% | |
| AGTCGATACTACTACTTACA+TGG | - | chr1_1:2294096-2294115 | None:intergenic | 35.0% | |
| TTCACTTCAATTGCTTCCGA+CGG | - | chr1_1:2283084-2283103 | None:intergenic | 40.0% | |
| AACCCTAAGATGGAATCACA+CGG | + | chr1_1:2283113-2283132 | Msa0000890:exon | 40.0% | |
| GACGAGTACGATAATGACAA+CGG | + | chr1_1:2283392-2283411 | Msa0000890:CDS | 40.0% | |
| ! | CTTTTGATCTTCGTATTGCG+AGG | - | chr1_1:2283470-2283489 | None:intergenic | 40.0% |
| AGATTCATTGCGAGACTGTT+TGG | + | chr1_1:2283905-2283924 | Msa0000890:intron | 40.0% | |
| GATTCATTGCGAGACTGTTT+GGG | + | chr1_1:2283906-2283925 | Msa0000890:intron | 40.0% | |
| !! | AGTTTGAGCTTTGAGGTGAT+AGG | + | chr1_1:2284170-2284189 | Msa0000890:intron | 40.0% |
| GAAGATCAGTAGTGTAAGCA+GGG | - | chr1_1:2284310-2284329 | None:intergenic | 40.0% | |
| AGAAGATCAGTAGTGTAAGC+AGG | - | chr1_1:2284311-2284330 | None:intergenic | 40.0% | |
| CCACTGAATTGATCTCTCAA+TGG | - | chr1_1:2284544-2284563 | None:intergenic | 40.0% | |
| CCATTGAGAGATCAATTCAG+TGG | + | chr1_1:2284541-2284560 | Msa0000890:intron | 40.0% | |
| !! | ATGGTCTCCATTGACTTGTA+GGG | + | chr1_1:2284583-2284602 | Msa0000890:intron | 40.0% |
| AAACAGACCCTACAAGTCAA+TGG | - | chr1_1:2284593-2284612 | None:intergenic | 40.0% | |
| GACTAAAATGGATGCAATGG+GGG | - | chr1_1:2284966-2284985 | None:intergenic | 40.0% | |
| GCAGACTAAAATGGATGCAA+TGG | - | chr1_1:2284969-2284988 | None:intergenic | 40.0% | |
| ATGTACTCCTTGGGCATATT+GGG | - | chr1_1:2285133-2285152 | None:intergenic | 40.0% | |
| AATGTACTCCTTGGGCATAT+TGG | - | chr1_1:2285134-2285153 | None:intergenic | 40.0% | |
| ACACGGTGCTTAAATTAGTC+TGG | + | chr1_1:2285219-2285238 | Msa0000890:intron | 40.0% | |
| ! | CACGGTGCTTAAATTAGTCT+GGG | + | chr1_1:2285220-2285239 | Msa0000890:intron | 40.0% |
| !!! | GGAGTTGTTTTTGCCTTGAA+TGG | - | chr1_1:2285277-2285296 | None:intergenic | 40.0% |
| GGTATGGCTGCAAAATCTTT+GGG | - | chr1_1:2285576-2285595 | None:intergenic | 40.0% | |
| TGGTATGGCTGCAAAATCTT+TGG | - | chr1_1:2285577-2285596 | None:intergenic | 40.0% | |
| !! | AATGAAGAGTACTCCTGGTA+TGG | - | chr1_1:2285790-2285809 | None:intergenic | 40.0% |
| GAAAAATTCCAGAGTAGCAG+AGG | - | chr1_1:2286019-2286038 | None:intergenic | 40.0% | |
| TAGGAGCCATAAGTCTGTAA+TGG | + | chr1_1:2286082-2286101 | Msa0000890:intron | 40.0% | |
| ATAAGGCGTAATCACGTTGT+TGG | + | chr1_1:2286107-2286126 | Msa0000890:CDS | 40.0% | |
| CATGACAACTAGAACCTGAA+AGG | - | chr1_1:2286189-2286208 | None:intergenic | 40.0% | |
| CTAGTTGTCATGTGACTGAA+AGG | + | chr1_1:2286197-2286216 | Msa0000890:intron | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | + | chr1_1:2286240-2286259 | Msa0000890:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | + | chr1_1:2286241-2286260 | Msa0000890:intron | 40.0% | |
| ! | CTTACCCTGTTTTACACAAG+AGG | - | chr1_1:2286248-2286267 | None:intergenic | 40.0% |
| CTCTTGTGTAAAACAGGGTA+AGG | + | chr1_1:2286246-2286265 | Msa0000890:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr1_1:2286272-2286291 | Msa0000890:intron | 40.0% | |
| AGGCAGGAGACGAAATTAAT+GGG | - | chr1_1:2286634-2286653 | None:intergenic | 40.0% | |
| TAGGCAGGAGACGAAATTAA+TGG | - | chr1_1:2286635-2286654 | None:intergenic | 40.0% | |
| !!! | AATTTTTTTAGTCGGGGGTG+GGG | - | chr1_1:2286682-2286701 | None:intergenic | 40.0% |
| TACTTGTAAGGATTGTGCCA+TGG | + | chr1_1:2286703-2286722 | Msa0000890:intron | 40.0% | |
| ATCAGCCGTAATTGCACAAA+AGG | - | chr1_1:2286787-2286806 | None:intergenic | 40.0% | |
| GATGAGCAAGTAAAAGGGTA+TGG | + | chr1_1:2286804-2286823 | Msa0000890:CDS | 40.0% | |
| AGTATGCTCGTGATGTAGAT+GGG | + | chr1_1:2286853-2286872 | Msa0000890:CDS | 40.0% | |
| TATGCCGACAATAATGCTGT+TGG | + | chr1_1:2286894-2286913 | Msa0000890:CDS | 40.0% | |
| CTTGCTAACAAGTGTCCTAA+AGG | + | chr1_1:2287115-2287134 | Msa0000890:intron | 40.0% | |
| GCTCATTAACATGAGCCTTT+AGG | - | chr1_1:2287133-2287152 | None:intergenic | 40.0% | |
| CATATGCTAACAAGTGCCAA+GGG | - | chr1_1:2287271-2287290 | None:intergenic | 40.0% | |
| ! | TTTTCCAGAATTAGGGCAGA+AGG | - | chr1_1:2287694-2287713 | None:intergenic | 40.0% |
| CCACCAAGAAGCAAAAAAGA+AGG | - | chr1_1:2287742-2287761 | None:intergenic | 40.0% | |
| !!! | CCTTCTTTTTTGCTTCTTGG+TGG | + | chr1_1:2287739-2287758 | Msa0000890:intron | 40.0% |
| !!! | TCTTTTTTGCTTCTTGGTGG+AGG | + | chr1_1:2287742-2287761 | Msa0000890:intron | 40.0% |
| ACAACGACCAGTATATTTCC+TGG | + | chr1_1:2287798-2287817 | Msa0000890:intron | 40.0% | |
| GCAGTGAAATTATGCTTCTG+TGG | - | chr1_1:2287848-2287867 | None:intergenic | 40.0% | |
| TTCACTTGGAGAAAGATCGA+TGG | + | chr1_1:2288063-2288082 | Msa0000890:CDS | 40.0% | |
| TCATTTAGTTGTTGAGGGTG+TGG | + | chr1_1:2288233-2288252 | Msa0000890:intron | 40.0% | |
| ! | CATTTAGTTGTTGAGGGTGT+GGG | + | chr1_1:2288234-2288253 | Msa0000890:intron | 40.0% |
| ! | ATTTAGTTGTTGAGGGTGTG+GGG | + | chr1_1:2288235-2288254 | Msa0000890:intron | 40.0% |
| ! | TTATGATGGGGGAATTCTCA+TGG | + | chr1_1:2288424-2288443 | Msa0000890:CDS | 40.0% |
| ATCTTACCTGTCTTTGACGA+CGG | - | chr1_1:2288499-2288518 | None:intergenic | 40.0% | |
| TTGTGTGTGTGAGTTTCCAA+TGG | - | chr1_1:2288725-2288744 | None:intergenic | 40.0% | |
| ! | AAATGCCGAAATTTCTAGGC+CGG | - | chr1_1:2288784-2288803 | None:intergenic | 40.0% |
| GATCTCGATCTTGACAACAT+TGG | + | chr1_1:2289036-2289055 | Msa0000890:intron | 40.0% | |
| AAAATGTTTCACCCTATCCC+TGG | + | chr1_1:2289215-2289234 | Msa0000890:intron | 40.0% | |
| TGCTCTTGTACTATGGAACT+GGG | - | chr1_1:2289288-2289307 | None:intergenic | 40.0% | |
| TTGCTCTTGTACTATGGAAC+TGG | - | chr1_1:2289289-2289308 | None:intergenic | 40.0% | |
| CAAGAGCAATAAAGCAGTAC+CGG | + | chr1_1:2289300-2289319 | Msa0000890:intron | 40.0% | |
| !! | GATTCGAGTTTTGTGATGTC+CGG | - | chr1_1:2289322-2289341 | None:intergenic | 40.0% |
| !! | TCGAATCCTAAGGCTTTGTT+TGG | + | chr1_1:2289335-2289354 | Msa0000890:intron | 40.0% |
| !! | CGAATCCTAAGGCTTTGTTT+GGG | + | chr1_1:2289336-2289355 | Msa0000890:intron | 40.0% |
| AAACTCCCAAACAAAGCCTT+AGG | - | chr1_1:2289344-2289363 | None:intergenic | 40.0% | |
| !! | GCTTTGTTTGGGAGTTTAGA+GGG | + | chr1_1:2289347-2289366 | Msa0000890:intron | 40.0% |
| ! | CTTTGTTTGGGAGTTTAGAG+GGG | + | chr1_1:2289348-2289367 | Msa0000890:intron | 40.0% |
| TTTGAGGGGTGGAAAATTTG+AGG | + | chr1_1:2289386-2289405 | Msa0000890:intron | 40.0% | |
| TTGAGGGGTGGAAAATTTGA+GGG | + | chr1_1:2289387-2289406 | Msa0000890:intron | 40.0% | |
| !!! | TATTGGAGAAGGGTTTTGGA+GGG | - | chr1_1:2289547-2289566 | None:intergenic | 40.0% |
| TACAAAACCCTCCTCATTTG+GGG | - | chr1_1:2289584-2289603 | None:intergenic | 40.0% | |
| GAAATAGAGGAAAATGGGAG+GGG | - | chr1_1:2289638-2289657 | None:intergenic | 40.0% | |
| TGAGCAAGTGGAAGAAATAG+AGG | - | chr1_1:2289651-2289670 | None:intergenic | 40.0% | |
| GGAAAAAAGGAATGAGCAAG+TGG | - | chr1_1:2289663-2289682 | None:intergenic | 40.0% | |
| !! | TTAGGCTTTGTTTGCGAGTT+TGG | - | chr1_1:2289709-2289728 | None:intergenic | 40.0% |
| AACTCGCAAACAAAGCCTAA+AGG | + | chr1_1:2289709-2289728 | Msa0000890:intron | 40.0% | |
| ACTCGCAAACAAAGCCTAAA+GGG | + | chr1_1:2289710-2289729 | Msa0000890:intron | 40.0% | |
| ! | CTGTGAATGTGAGCTCTTTT+AGG | + | chr1_1:2289852-2289871 | Msa0000890:intron | 40.0% |
| ! | TGAATGTGAGCTCTTTTAGG+TGG | + | chr1_1:2289855-2289874 | Msa0000890:intron | 40.0% |
| CTATTGGGAAGTTATTGGAG+TGG | - | chr1_1:2290043-2290062 | None:intergenic | 40.0% | |
| TAATCAATTGACCAGACAGG+GGG | - | chr1_1:2290074-2290093 | None:intergenic | 40.0% | |
| GTAATCAATTGACCAGACAG+GGG | - | chr1_1:2290075-2290094 | None:intergenic | 40.0% | |
| CTTTCTCTATGATGTGTAGC+TGG | + | chr1_1:2290106-2290125 | Msa0000890:intron | 40.0% | |
| !! | TCCTGGAATCGATTTTCAGA+AGG | + | chr1_1:2290578-2290597 | Msa0000890:CDS | 40.0% |
| ! | ACCTTCTGAAAATCGATTCC+AGG | - | chr1_1:2290582-2290601 | None:intergenic | 40.0% |
| GTTAAGGAAGTTAGCATGCT+TGG | - | chr1_1:2290760-2290779 | None:intergenic | 40.0% | |
| ATATTGTGTCAATCAGGAGG+GGG | - | chr1_1:2290896-2290915 | None:intergenic | 40.0% | |
| CATATTGTGTCAATCAGGAG+GGG | - | chr1_1:2290897-2290916 | None:intergenic | 40.0% | |
| GCATATTGTGTCAATCAGGA+GGG | - | chr1_1:2290898-2290917 | None:intergenic | 40.0% | |
| TGCATATTGTGTCAATCAGG+AGG | - | chr1_1:2290899-2290918 | None:intergenic | 40.0% | |
| CACAATATGCAGAAAGAAGC+TGG | + | chr1_1:2290908-2290927 | Msa0000890:intron | 40.0% | |
| GTCGACCTCTTTCATCTATA+AGG | + | chr1_1:2291131-2291150 | Msa0000890:intron | 40.0% | |
| TCCTTGAATTTCAGGGTTGA+GGG | - | chr1_1:2291564-2291583 | None:intergenic | 40.0% | |
| ACCCTGAAATTCAAGGAGAA+AGG | + | chr1_1:2291567-2291586 | Msa0000890:intron | 40.0% | |
| ! | TTTTTGCAGAGGAAAGGGAA+TGG | - | chr1_1:2291632-2291651 | None:intergenic | 40.0% |
| !!! | GGAAGTTTTTTGCAGAGGAA+AGG | - | chr1_1:2291638-2291657 | None:intergenic | 40.0% |
| ! | GAGGTGACAAAGCTTTTGAT+TGG | - | chr1_1:2291659-2291678 | None:intergenic | 40.0% |
| ! | TTAACTGCCGAAGTTTTCCT+CGG | - | chr1_1:2292705-2292724 | None:intergenic | 40.0% |
| GAAAAAAAAAGGGGGGTTTG+AGG | + | chr1_1:2292637-2292656 | Msa0000890:intron | 40.0% | |
| ! | TTAACTGCCGAAGTTTTCCT+CGG | + | chr1_1:2292705-2292724 | Msa0000890:intron | 40.0% |
| ! | AAAATACGTTTTTGCCCCCT+CGG | - | chr1_1:2292771-2292790 | None:intergenic | 40.0% |
| TGCTGTTGACACATTGCATA+AGG | - | chr1_1:2292809-2292828 | None:intergenic | 40.0% | |
| TTGAATGCCAATAACAGGAG+AGG | + | chr1_1:2292961-2292980 | Msa0000890:intron | 40.0% | |
| GGAGGGATTATCCATGAATA+TGG | - | chr1_1:2293199-2293218 | None:intergenic | 40.0% | |
| CAAAGATCCAATGGGTAAGA+AGG | + | chr1_1:2293371-2293390 | Msa0000890:intron | 40.0% | |
| TAAGGATCCTTCTTACCCAT+TGG | - | chr1_1:2293381-2293400 | None:intergenic | 40.0% | |
| TACAAATGTGCTACAAGGCA+TGG | + | chr1_1:2293841-2293860 | Msa0000890:intron | 40.0% | |
| TTTGCGTTTGTGGATGGATG+AGG | - | chr1_1:2283207-2283226 | None:intergenic | 45.0% | |
| GATAAGGAAGAAGGAGGGAA+CGG | - | chr1_1:2283254-2283273 | None:intergenic | 45.0% | |
| TCTGATGGAGCTAAAGATGC+TGG | + | chr1_1:2283518-2283537 | Msa0000890:CDS | 45.0% | |
| ATCCTCCTTAACCACAATGC+CGG | - | chr1_1:2283585-2283604 | None:intergenic | 45.0% | |
| TAGTGGTGCTTATAGTGCCA+GGG | + | chr1_1:2283637-2283656 | Msa0000890:CDS | 45.0% | |
| TTTCTTGAGACTCTCTTCCC+TGG | - | chr1_1:2283657-2283676 | None:intergenic | 45.0% | |
| GGAAGAGAGTCTCAAGAAAG+AGG | + | chr1_1:2283658-2283677 | Msa0000890:CDS | 45.0% | |
| TGATGGAGTTGACCAGCATA+TGG | + | chr1_1:2284263-2284282 | Msa0000890:CDS | 45.0% | |
| GAGTTGACCAGCATATGGTT+TGG | + | chr1_1:2284268-2284287 | Msa0000890:CDS | 45.0% | |
| TGATTGCTAGTAAGCGGGAA+TGG | + | chr1_1:2284360-2284379 | Msa0000890:intron | 45.0% | |
| GTCAATGGAGACCATCACAT+TGG | - | chr1_1:2284578-2284597 | None:intergenic | 45.0% | |
| !! | GATGGTCTCCATTGACTTGT+AGG | + | chr1_1:2284582-2284601 | Msa0000890:intron | 45.0% |
| !! | GCTTTGCTCCATAGGTTGAT+AGG | + | chr1_1:2285079-2285098 | Msa0000890:intron | 45.0% |
| ACAACTTCCCAATATGCCCA+AGG | + | chr1_1:2285123-2285142 | Msa0000890:CDS | 45.0% | |
| !! | GTACATTGTCCGGCTTGTTA+TGG | + | chr1_1:2285147-2285166 | Msa0000890:CDS | 45.0% |
| !! | TTGTCCGGCTTGTTATGGAT+AGG | + | chr1_1:2285152-2285171 | Msa0000890:CDS | 45.0% |
| TTAGATGGGTAGAGAAAGGG+AGG | - | chr1_1:2285450-2285469 | None:intergenic | 45.0% | |
| ! | ATGGCACGTTGGTAAACCTA+TGG | - | chr1_1:2285771-2285790 | None:intergenic | 45.0% |
| GTACTCTTCATTCTGCCAAG+AGG | + | chr1_1:2285798-2285817 | Msa0000890:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | + | chr1_1:2286203-2286222 | Msa0000890:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | + | chr1_1:2286204-2286223 | Msa0000890:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr1_1:2286237-2286256 | None:intergenic | 45.0% |
| GCTGCGTACAATACACCAAA+TGG | + | chr1_1:2286268-2286287 | Msa0000890:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr1_1:2286271-2286290 | Msa0000890:intron | 45.0% | |
| GCAGGAGACGAAATTAATGG+GGG | - | chr1_1:2286632-2286651 | None:intergenic | 45.0% | |
| GGCAGGAGACGAAATTAATG+GGG | - | chr1_1:2286633-2286652 | None:intergenic | 45.0% | |
| !! | ATGGTTGATAGCCAGAGGTT+TGG | + | chr1_1:2286753-2286772 | Msa0000890:intron | 45.0% |
| ACGGCTGATGAGCAAGTAAA+AGG | + | chr1_1:2286798-2286817 | Msa0000890:CDS | 45.0% | |
| CGGCTGATGAGCAAGTAAAA+GGG | + | chr1_1:2286799-2286818 | Msa0000890:CDS | 45.0% | |
| CAGTATGCTCGTGATGTAGA+TGG | + | chr1_1:2286852-2286871 | Msa0000890:CDS | 45.0% | |
| ATGAGTTGCAGCAGTTCACA+TGG | + | chr1_1:2287067-2287086 | Msa0000890:intron | 45.0% | |
| GACTCCTTAATATGTGCCCT+TGG | + | chr1_1:2287252-2287271 | Msa0000890:intron | 45.0% | |
| ! | AGTGCCAAGGGCACATATTA+AGG | - | chr1_1:2287259-2287278 | None:intergenic | 45.0% |
| GCATATGCTAACAAGTGCCA+AGG | - | chr1_1:2287272-2287291 | None:intergenic | 45.0% | |
| TTTAGCACAACCCAACTAGG+AGG | - | chr1_1:2287376-2287395 | None:intergenic | 45.0% | |
| GCATTTAGCACAACCCAACT+AGG | - | chr1_1:2287379-2287398 | None:intergenic | 45.0% | |
| CTGCATGGTAGCAGTCATAT+AGG | + | chr1_1:2287864-2287883 | Msa0000890:intron | 45.0% | |
| TTGGAGAAAGATCGATGGCA+TGG | + | chr1_1:2288068-2288087 | Msa0000890:CDS | 45.0% | |
| TGGAGAAAGATCGATGGCAT+GGG | + | chr1_1:2288069-2288088 | Msa0000890:CDS | 45.0% | |
| TATGATCCGTCGTCAAAGAC+AGG | + | chr1_1:2288490-2288509 | Msa0000890:CDS | 45.0% | |
| TGGAAACTCACACACACAAG+TGG | + | chr1_1:2288726-2288745 | Msa0000890:intron | 45.0% | |
| AAACTCACACACACAAGTGG+AGG | + | chr1_1:2288729-2288748 | Msa0000890:intron | 45.0% | |
| ! | AAGCCTTATCCTGCTAAGTG+GGG | - | chr1_1:2288882-2288901 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCTGCTAAGT+GGG | - | chr1_1:2288883-2288902 | None:intergenic | 45.0% |
| AACAACCAAGTCCATGACCA+GGG | - | chr1_1:2289235-2289254 | None:intergenic | 45.0% | |
| TAACAACCAAGTCCATGACC+AGG | - | chr1_1:2289236-2289255 | None:intergenic | 45.0% | |
| !! | GGCTTTGTTTGGGAGTTTAG+AGG | + | chr1_1:2289346-2289365 | Msa0000890:intron | 45.0% |
| !! | GTATTGGAGAAGGGTTTTGG+AGG | - | chr1_1:2289548-2289567 | None:intergenic | 45.0% |
| TATAGTTCCCCCAAATGAGG+AGG | + | chr1_1:2289573-2289592 | Msa0000890:intron | 45.0% | |
| ATAGTTCCCCCAAATGAGGA+GGG | + | chr1_1:2289574-2289593 | Msa0000890:intron | 45.0% | |
| ACAAAACCCTCCTCATTTGG+GGG | - | chr1_1:2289583-2289602 | None:intergenic | 45.0% | |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr1_1:2289704-2289723 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr1_1:2289705-2289724 | None:intergenic | 45.0% |
| TATCAGCTAGGAAGCCCTTT+AGG | - | chr1_1:2289727-2289746 | None:intergenic | 45.0% | |
| TAAAGGGCTTCCTAGCTGAT+AGG | + | chr1_1:2289726-2289745 | Msa0000890:intron | 45.0% | |
| TCAAGGACATCCTATCAGCT+AGG | - | chr1_1:2289739-2289758 | None:intergenic | 45.0% | |
| CTACGATTTGAGGATGAGGA+TGG | + | chr1_1:2289773-2289792 | Msa0000890:intron | 45.0% | |
| !!! | GATGAGGATGGTGCTTTTTC+TGG | + | chr1_1:2289785-2289804 | Msa0000890:intron | 45.0% |
| !! | GAGCTCTTTTAGGTGGTGTT+AGG | + | chr1_1:2289862-2289881 | Msa0000890:intron | 45.0% |
| TTCTGCTGGAACAATTGTGC+AGG | - | chr1_1:2289932-2289951 | None:intergenic | 45.0% | |
| TCTCCAAGAATTGGAGAGCT+TGG | + | chr1_1:2290002-2290021 | Msa0000890:intron | 45.0% | |
| CAGGGGGAAAATTGGCTATT+GGG | - | chr1_1:2290058-2290077 | None:intergenic | 45.0% | |
| ACAGGGGGAAAATTGGCTAT+TGG | - | chr1_1:2290059-2290078 | None:intergenic | 45.0% | |
| ACACGCTGTATTGTGAAGAC+AGG | - | chr1_1:2291052-2291071 | None:intergenic | 45.0% | |
| AGTTCTTGAGCTAAGGGAAG+TGG | + | chr1_1:2291334-2291353 | Msa0000890:intron | 45.0% | |
| GTTCTTGAGCTAAGGGAAGT+GGG | + | chr1_1:2291335-2291354 | Msa0000890:intron | 45.0% | |
| GAATTTCATGAGCCAAGGGA+TGG | + | chr1_1:2291400-2291419 | Msa0000890:intron | 45.0% | |
| CCTTGAATTTCAGGGTTGAG+GGG | - | chr1_1:2291563-2291582 | None:intergenic | 45.0% | |
| CTCCTTGAATTTCAGGGTTG+AGG | - | chr1_1:2291565-2291584 | None:intergenic | 45.0% | |
| TTATTAGGAGTAGGGGAGCA+CGG | - | chr1_1:2291693-2291712 | None:intergenic | 45.0% | |
| ! | CTGCAGCCGGTTTCATAATT+CGG | + | chr1_1:2292735-2292754 | Msa0000890:intron | 45.0% |
| CATTCACGGTTCAGAACCTT+AGG | + | chr1_1:2293010-2293029 | Msa0000890:CDS | 45.0% | |
| AGGAACATCTCGTGCATCAA+CGG | - | chr1_1:2293334-2293353 | None:intergenic | 45.0% | |
| CGTGAGAGAATCCAAATCCA+TGG | - | chr1_1:2293485-2293504 | None:intergenic | 45.0% | |
| CACGTGTGAATCTCACATGA+AGG | + | chr1_1:2293501-2293520 | Msa0000890:intron | 45.0% | |
| GAAGACAATGAGTAAGAGGG+TGG | + | chr1_1:2293720-2293739 | Msa0000890:CDS | 45.0% | |
| TCCGGCAACAAAGTTCAGTA+GGG | + | chr1_1:2293997-2294016 | Msa0000890:CDS | 45.0% | |
| TCCCTACTGAACTTTGTTGC+CGG | - | chr1_1:2294001-2294020 | None:intergenic | 45.0% | |
| !! | AATAATTTATATAAAACTAT+GGG | - | chr1_1:2284143-2284162 | None:intergenic | 5.0% |
| !! | TAATAATTTATATAAAACTA+TGG | - | chr1_1:2284144-2284163 | None:intergenic | 5.0% |
| !! | TTTAATCTTTAATAAAATAA+TGG | - | chr1_1:2285861-2285880 | None:intergenic | 5.0% |
| !!! | TAGAAATTATTTTTTAAATT+TGG | + | chr1_1:2287931-2287950 | Msa0000890:intron | 5.0% |
| !!! | TTTTGTAAAAAAAAAAAAAA+CGG | - | chr1_1:2291917-2291936 | None:intergenic | 5.0% |
| !! | TAAAGAATTAAATTTAATTA+AGG | - | chr1_1:2292571-2292590 | None:intergenic | 5.0% |
| !! | TAAAGAATTAAATTTAATTA+AGG | + | chr1_1:2292571-2292590 | Msa0000890:intron | 5.0% |
| CACAAAATAGCACGCACCGT+CGG | + | chr1_1:2283065-2283084 | Msa0000890:five_prime_UTR | 50.0% | |
| CGCCGTGTGATTCCATCTTA+GGG | - | chr1_1:2283118-2283137 | None:intergenic | 50.0% | |
| CCTAAGATGGAATCACACGG+CGG | + | chr1_1:2283116-2283135 | Msa0000890:exon | 50.0% | |
| TTTGTGGATGGATGAGGTGG+CGG | - | chr1_1:2283201-2283220 | None:intergenic | 50.0% | |
| GACGAGTTTGCGTTTGTGGA+TGG | - | chr1_1:2283213-2283232 | None:intergenic | 50.0% | |
| GAGGTCGTCATTGGAGGTTA+AGG | - | chr1_1:2283297-2283316 | None:intergenic | 50.0% | |
| ATCAGAGTCGTTTCCACGAG+CGG | - | chr1_1:2283330-2283349 | None:intergenic | 50.0% | |
| GTCGTCGACAACTGCATCTT+CGG | - | chr1_1:2283366-2283385 | None:intergenic | 50.0% | |
| ATGACAACGGTTCCTCCATG+CGG | + | chr1_1:2283405-2283424 | Msa0000890:CDS | 50.0% | |
| AGCAGTGAAATTCCGCATGG+AGG | - | chr1_1:2283420-2283439 | None:intergenic | 50.0% | |
| AGCAGCAGTGAAATTCCGCA+TGG | - | chr1_1:2283423-2283442 | None:intergenic | 50.0% | |
| TGCGGAATTTCACTGCTGCT+AGG | + | chr1_1:2283423-2283442 | Msa0000890:CDS | 50.0% | |
| GATCTTCGTATTGCGAGGAG+CGG | - | chr1_1:2283465-2283484 | None:intergenic | 50.0% | |
| TGTTCCCGGCATTGTGGTTA+AGG | + | chr1_1:2283577-2283596 | Msa0000890:CDS | 50.0% | |
| TCCTCCTTAACCACAATGCC+GGG | - | chr1_1:2283584-2283603 | None:intergenic | 50.0% | |
| CTAGTGGTGCTTATAGTGCC+AGG | + | chr1_1:2283636-2283655 | Msa0000890:CDS | 50.0% | |
| ! | TGCCCAAGGAGTACATTGTC+CGG | + | chr1_1:2285137-2285156 | Msa0000890:CDS | 50.0% |
| AGCCGGACAATGTACTCCTT+GGG | - | chr1_1:2285142-2285161 | None:intergenic | 50.0% | |
| AAGCCGGACAATGTACTCCT+TGG | - | chr1_1:2285143-2285162 | None:intergenic | 50.0% | |
| ! | TTTTGTGGGGCAGAGCAACT+GGG | - | chr1_1:2285298-2285317 | None:intergenic | 50.0% |
| !! | TTGATACGGAGGAGCACCAT+AGG | + | chr1_1:2285752-2285771 | Msa0000890:intron | 50.0% |
| GTTTACCAACGTGCCATACC+AGG | + | chr1_1:2285774-2285793 | Msa0000890:intron | 50.0% | |
| !! | GGCAGAATGAAGAGTACTCC+TGG | - | chr1_1:2285795-2285814 | None:intergenic | 50.0% |
| AGAAGCAACAGTGGTCCTCT+TGG | - | chr1_1:2285816-2285835 | None:intergenic | 50.0% | |
| ! | AGAGGACCACTGTTGCTTCT+CGG | + | chr1_1:2285816-2285835 | Msa0000890:intron | 50.0% |
| GTAAGACCGAGAAGCAACAG+TGG | - | chr1_1:2285825-2285844 | None:intergenic | 50.0% | |
| AGGCGTAATCACGTTGTTGG+AGG | + | chr1_1:2286110-2286129 | Msa0000890:CDS | 50.0% | |
| !! | GCACTATGGTTGATAGCCAG+AGG | + | chr1_1:2286748-2286767 | Msa0000890:intron | 50.0% |
| AGGCTATCTCACCAAACCTC+TGG | - | chr1_1:2286767-2286786 | None:intergenic | 50.0% | |
| ! | TGGAGCATCACCTCCTAGTT+GGG | + | chr1_1:2287363-2287382 | Msa0000890:intron | 50.0% |
| ! | CTTCGTGGTTCTTGATGGCT+TGG | + | chr1_1:2287599-2287618 | Msa0000890:intron | 50.0% |
| GGTTCCTTCTGCCCTAATTC+TGG | + | chr1_1:2287687-2287706 | Msa0000890:intron | 50.0% | |
| AGCGTCCGGCCTAGAAATTT+CGG | + | chr1_1:2288776-2288795 | Msa0000890:intron | 50.0% | |
| CTTATCCTGCTAAGTGGGGT+CGG | - | chr1_1:2288878-2288897 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCTGCTAAG+TGG | - | chr1_1:2288884-2288903 | None:intergenic | 50.0% |
| CCACTTAGCAGGATAAGGCT+TGG | + | chr1_1:2288881-2288900 | Msa0000890:intron | 50.0% | |
| TTTCACCCTATCCCTGGTCA+TGG | + | chr1_1:2289221-2289240 | Msa0000890:intron | 50.0% | |
| CAAGTCCATGACCAGGGATA+GGG | - | chr1_1:2289229-2289248 | None:intergenic | 50.0% | |
| TGTTTGGGAGTTTAGAGGGG+AGG | + | chr1_1:2289351-2289370 | Msa0000890:intron | 50.0% | |
| GTTTGGGAGTTTAGAGGGGA+GGG | + | chr1_1:2289352-2289371 | Msa0000890:intron | 50.0% | |
| TTTGGGAGTTTAGAGGGGAG+GGG | + | chr1_1:2289353-2289372 | Msa0000890:intron | 50.0% | |
| TAGAGGAAAATGGGAGGGGA+GGG | - | chr1_1:2289634-2289653 | None:intergenic | 50.0% | |
| ATAGAGGAAAATGGGAGGGG+AGG | - | chr1_1:2289635-2289654 | None:intergenic | 50.0% | |
| AGGGGAAGGCTTGGGAAAAA+AGG | - | chr1_1:2289676-2289695 | None:intergenic | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | - | chr1_1:2289699-2289718 | None:intergenic | 50.0% | |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr1_1:2289706-2289725 | None:intergenic | 50.0% |
| AGCCTCCCTTCTGACATTCT+CGG | - | chr1_1:2289834-2289853 | None:intergenic | 50.0% | |
| AGGCCAAGCTCTCCAATTCT+TGG | - | chr1_1:2290008-2290027 | None:intergenic | 50.0% | |
| TGGAGTGGTTATTTGGAGGG+AGG | - | chr1_1:2290028-2290047 | None:intergenic | 50.0% | |
| ! | TAGCCAATTTTCCCCCTGTC+TGG | + | chr1_1:2290060-2290079 | Msa0000890:intron | 50.0% |
| TGACCAGACAGGGGGAAAAT+TGG | - | chr1_1:2290066-2290085 | None:intergenic | 50.0% | |
| TCTATGATGTGTAGCTGGCC+TGG | + | chr1_1:2290111-2290130 | Msa0000890:intron | 50.0% | |
| TTTCATGAGCCAAGGGATGG+AGG | + | chr1_1:2291403-2291422 | Msa0000890:intron | 50.0% | |
| TTCATGAGCCAAGGGATGGA+GGG | + | chr1_1:2291404-2291423 | Msa0000890:intron | 50.0% | |
| CCCCTCAACCCTGAAATTCA+AGG | + | chr1_1:2291560-2291579 | Msa0000890:intron | 50.0% | |
| GTGAACACGTTCACCTCCTT+TGG | + | chr1_1:2291595-2291614 | Msa0000890:intron | 50.0% | |
| AATGGAAGGGGAAGGACCAA+AGG | - | chr1_1:2291614-2291633 | None:intergenic | 50.0% | |
| CAGAGGAAAGGGAATGGAAG+GGG | - | chr1_1:2291626-2291645 | None:intergenic | 50.0% | |
| GCAGAGGAAAGGGAATGGAA+GGG | - | chr1_1:2291627-2291646 | None:intergenic | 50.0% | |
| TGCAGAGGAAAGGGAATGGA+AGG | - | chr1_1:2291628-2291647 | None:intergenic | 50.0% | |
| TTCGGCAGTTAACTGCCGAA+GGG | - | chr1_1:2291792-2291811 | None:intergenic | 50.0% | |
| ATTCGGCAGTTAACTGCCGA+AGG | - | chr1_1:2292752-2292771 | None:intergenic | 50.0% | |
| ACTTCGGCAGTTAACTACCG+AGG | + | chr1_1:2291819-2291838 | Msa0000890:intron | 50.0% | |
| ACTTCGGCAGTTAACTACCG+AGG | + | chr1_1:2291819-2291838 | Msa0000890:intron | 50.0% | |
| ACTTCGGCAGTTAACTACCG+AGG | - | chr1_1:2291819-2291838 | None:intergenic | 50.0% | |
| AATTCGGCAGTTAACTGCCG+AGG | + | chr1_1:2292751-2292770 | Msa0000890:intron | 50.0% | |
| ATTCGGCAGTTAACTGCCGA+GGG | + | chr1_1:2292752-2292771 | Msa0000890:intron | 50.0% | |
| ATGCCAATAACAGGAGAGGC+TGG | + | chr1_1:2292965-2292984 | Msa0000890:intron | 50.0% | |
| CATCCAGCCTCTCCTGTTAT+TGG | - | chr1_1:2292971-2292990 | None:intergenic | 50.0% | |
| CAATAACAGGAGAGGCTGGA+TGG | + | chr1_1:2292969-2292988 | Msa0000890:intron | 50.0% | |
| ! | TGGATGGACTCCTGATCAGT+GGG | + | chr1_1:2292985-2293004 | Msa0000890:CDS | 50.0% |
| CTGATCAGTGGGGTCATTCA+CGG | + | chr1_1:2292996-2293015 | Msa0000890:CDS | 50.0% | |
| TCACGGTTCAGAACCTTAGG+CGG | + | chr1_1:2293013-2293032 | Msa0000890:CDS | 50.0% | |
| AATGTCGGTAGAACCGCCTA+AGG | - | chr1_1:2293029-2293048 | None:intergenic | 50.0% | |
| TGCATGATCACGCTGATGCT+TGG | + | chr1_1:2293295-2293314 | Msa0000890:CDS | 50.0% | |
| ! | GCATCAACGGGTTCCTTGAA+TGG | - | chr1_1:2293321-2293340 | None:intergenic | 50.0% |
| GGAACATCTCGTGCATCAAC+GGG | - | chr1_1:2293333-2293352 | None:intergenic | 50.0% | |
| GCGAGCATGCTTCTAGACAT+AGG | - | chr1_1:2293422-2293441 | None:intergenic | 50.0% | |
| GTGCATTCGATTCTCCAGTC+CGG | + | chr1_1:2293979-2293998 | Msa0000890:CDS | 50.0% | |
| ACTGAACTTTGTTGCCGGAC+TGG | - | chr1_1:2293996-2294015 | None:intergenic | 50.0% | |
| GTCCGGCAACAAAGTTCAGT+AGG | + | chr1_1:2293996-2294015 | Msa0000890:CDS | 50.0% | |
| CCGCCGTGTGATTCCATCTT+AGG | - | chr1_1:2283119-2283138 | None:intergenic | 55.0% | |
| AAGATGGAATCACACGGCGG+AGG | + | chr1_1:2283119-2283138 | Msa0000890:exon | 55.0% | |
| !! | AGAAGCGGATTGGGAACTCC+GGG | - | chr1_1:2283156-2283175 | None:intergenic | 55.0% |
| !! | GAGAAGCGGATTGGGAACTC+CGG | - | chr1_1:2283157-2283176 | None:intergenic | 55.0% |
| ! | GTGGGATGGAGAAGCGGATT+GGG | - | chr1_1:2283165-2283184 | None:intergenic | 55.0% |
| AGTGGGATGGAGAAGCGGAT+TGG | - | chr1_1:2283166-2283185 | None:intergenic | 55.0% | |
| GCGTTTGTGGATGGATGAGG+TGG | - | chr1_1:2283204-2283223 | None:intergenic | 55.0% | |
| CGGAGACGAGTTTGCGTTTG+TGG | - | chr1_1:2283217-2283236 | None:intergenic | 55.0% | |
| AAGGAAGAAGGAGGGAACGG+TGG | - | chr1_1:2283251-2283270 | None:intergenic | 55.0% | |
| CGGCGGATAAGGAAGAAGGA+GGG | - | chr1_1:2283259-2283278 | None:intergenic | 55.0% | |
| TCGGCGGATAAGGAAGAAGG+AGG | - | chr1_1:2283260-2283279 | None:intergenic | 55.0% | |
| ! | GTGTCGGCGGATAAGGAAGA+AGG | - | chr1_1:2283263-2283282 | None:intergenic | 55.0% |
| GATGCTCTCGAGGTCGTCAT+TGG | - | chr1_1:2283306-2283325 | None:intergenic | 55.0% | |
| TTCGTATTGCGAGGAGCGGA+AGG | - | chr1_1:2283461-2283480 | None:intergenic | 55.0% | |
| AACAGAACCACCACCAGCAC+CGG | - | chr1_1:2283561-2283580 | None:intergenic | 55.0% | |
| ! | TGGTTCTGTTCCCGGCATTG+TGG | + | chr1_1:2283571-2283590 | Msa0000890:CDS | 55.0% |
| TCCCGGCATTGTGGTTAAGG+AGG | + | chr1_1:2283580-2283599 | Msa0000890:CDS | 55.0% | |
| ! | GTTTTGTGGGGCAGAGCAAC+TGG | - | chr1_1:2285299-2285318 | None:intergenic | 55.0% |
| GTACTCCTGGTATGGCACGT+TGG | - | chr1_1:2285782-2285801 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr1_1:2286216-2286235 | Msa0000890:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr1_1:2286311-2286330 | None:intergenic | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr1_1:2286312-2286331 | None:intergenic | 55.0% | |
| !!! | TTTTTTAGTCGGGGGTGGGG+AGG | - | chr1_1:2286679-2286698 | None:intergenic | 55.0% |
| GTTGCAGCAGTTCACATGGC+AGG | + | chr1_1:2287071-2287090 | Msa0000890:intron | 55.0% | |
| ATGCTCCAGAGCGTGGTTAG+CGG | - | chr1_1:2287351-2287370 | None:intergenic | 55.0% | |
| ! | CTGGAGCATCACCTCCTAGT+TGG | + | chr1_1:2287362-2287381 | Msa0000890:intron | 55.0% |
| ACACACACAAGTGGAGGAGC+CGG | + | chr1_1:2288735-2288754 | Msa0000890:intron | 55.0% | |
| TGTGGCAAGGGTTTGAACCC+CGG | - | chr1_1:2288757-2288776 | None:intergenic | 55.0% | |
| ! | AATTTCTAGGCCGGACGCTG+TGG | - | chr1_1:2288775-2288794 | None:intergenic | 55.0% |
| ATTAGCCGACCCCACTTAGC+AGG | + | chr1_1:2288870-2288889 | Msa0000890:intron | 55.0% | |
| CGACCCCACTTAGCAGGATA+AGG | + | chr1_1:2288876-2288895 | Msa0000890:intron | 55.0% | |
| ACGATCTTGCAACCTCCTCC+TGG | + | chr1_1:2289002-2289021 | Msa0000890:intron | 55.0% | |
| ! | GCAACCTCCTCCTGGTCTTT+AGG | + | chr1_1:2289010-2289029 | Msa0000890:intron | 55.0% |
| GATCCTGCCTAAAGACCAGG+AGG | - | chr1_1:2289020-2289039 | None:intergenic | 55.0% | |
| CGAGATCCTGCCTAAAGACC+AGG | - | chr1_1:2289023-2289042 | None:intergenic | 55.0% | |
| CCAAGTCCATGACCAGGGAT+AGG | - | chr1_1:2289230-2289249 | None:intergenic | 55.0% | |
| CCTATCCCTGGTCATGGACT+TGG | + | chr1_1:2289227-2289246 | Msa0000890:intron | 55.0% | |
| GAGTTTAGAGGGGAGGGGAA+GGG | + | chr1_1:2289358-2289377 | Msa0000890:intron | 55.0% | |
| ! | AGGGGAAGGGAAGGCTTTGA+GGG | + | chr1_1:2289371-2289390 | Msa0000890:intron | 55.0% |
| AAATGGGAGGGGAGGGCTTT+GGG | - | chr1_1:2289627-2289646 | None:intergenic | 55.0% | |
| AAAATGGGAGGGGAGGGCTT+TGG | - | chr1_1:2289628-2289647 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | - | chr1_1:2289700-2289719 | None:intergenic | 55.0% | |
| ATTCTCGGTCCCCTATCACG+AGG | - | chr1_1:2289819-2289838 | None:intergenic | 55.0% | |
| AGGGGACCGAGAATGTCAGA+AGG | + | chr1_1:2289825-2289844 | Msa0000890:intron | 55.0% | |
| GGGGACCGAGAATGTCAGAA+GGG | + | chr1_1:2289826-2289845 | Msa0000890:intron | 55.0% | |
| GACCGAGAATGTCAGAAGGG+AGG | + | chr1_1:2289829-2289848 | Msa0000890:intron | 55.0% | |
| CTTGAGCTAAGGGAAGTGGG+AGG | + | chr1_1:2291338-2291357 | Msa0000890:intron | 55.0% | |
| GGAAAGGGAATGGAAGGGGA+AGG | - | chr1_1:2291622-2291641 | None:intergenic | 55.0% | |
| TCGGCAGTTAACTGCCGAAG+GGG | - | chr1_1:2292665-2292684 | None:intergenic | 55.0% | |
| ACTTCGGCAGTTAACTGCCG+AGG | + | chr1_1:2291878-2291897 | Msa0000890:intron | 55.0% | |
| ACGGGGGTTTGAGGATTCCT+CGG | - | chr1_1:2291898-2291917 | None:intergenic | 55.0% | |
| AGGGGGGTTTGAGGATTCCT+CGG | + | chr1_1:2292646-2292665 | Msa0000890:intron | 55.0% | |
| ACTTCGGCAGTTAACTGCCG+AGG | - | chr1_1:2291878-2291897 | None:intergenic | 55.0% | |
| CCTCGGTAGTTAACTGCAGC+CGG | + | chr1_1:2292722-2292741 | Msa0000890:intron | 55.0% | |
| TTCGGCAGTTAACTGCCGAG+GGG | + | chr1_1:2291880-2291899 | Msa0000890:intron | 55.0% | |
| ! | CTGGATGGACTCCTGATCAG+TGG | + | chr1_1:2292984-2293003 | Msa0000890:CDS | 55.0% |
| ! | GGATGGACTCCTGATCAGTG+GGG | + | chr1_1:2292986-2293005 | Msa0000890:CDS | 55.0% |
| CGTGAATGACCCCACTGATC+AGG | - | chr1_1:2292998-2293017 | None:intergenic | 55.0% | |
| CGCTGATGCTTGGCCATTCA+AGG | + | chr1_1:2293305-2293324 | Msa0000890:CDS | 55.0% | |
| GAGTAAGAGGGTGGAGTCAG+AGG | + | chr1_1:2293729-2293748 | Msa0000890:CDS | 55.0% | |
| ! | CGGATTGGGAACTCCGGGAA+CGG | - | chr1_1:2283151-2283170 | None:intergenic | 60.0% |
| !! | GATGGATGAGGTGGCGGAAG+CGG | - | chr1_1:2283195-2283214 | None:intergenic | 60.0% |
| GAACGGTGGCGCGTGATCTT+CGG | - | chr1_1:2283237-2283256 | None:intergenic | 60.0% | |
| TTATCCGCCGACACACGCGA+CGG | + | chr1_1:2283269-2283288 | Msa0000890:CDS | 60.0% | |
| GCTCTCGAGGTCGTCATTGG+AGG | - | chr1_1:2283303-2283322 | None:intergenic | 60.0% | |
| GATGCTGGACCTCCTGTCAC+CGG | + | chr1_1:2283533-2283552 | Msa0000890:CDS | 60.0% | |
| !! | GCTGGTGGTGGTTCTGTTCC+CGG | + | chr1_1:2283563-2283582 | Msa0000890:CDS | 60.0% |
| TGGATGCAATGGGGGTGAGC+AGG | - | chr1_1:2284958-2284977 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr1_1:2286284-2286303 | Msa0000890:intron | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr1_1:2286299-2286318 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr1_1:2286300-2286319 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr1_1:2286299-2286318 | Msa0000890:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr1_1:2286300-2286319 | Msa0000890:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr1_1:2286316-2286335 | Msa0000890:intron | 60.0% |
| CACACACAAGTGGAGGAGCC+GGG | + | chr1_1:2288736-2288755 | Msa0000890:intron | 60.0% | |
| ACACACAAGTGGAGGAGCCG+GGG | + | chr1_1:2288737-2288756 | Msa0000890:intron | 60.0% | |
| CAAACCCTTGCCACAGCGTC+CGG | + | chr1_1:2288762-2288781 | Msa0000890:intron | 60.0% | |
| CCTGCCTAAAGACCAGGAGG+AGG | - | chr1_1:2289017-2289036 | None:intergenic | 60.0% | |
| ! | CCTCCTCCTGGTCTTTAGGC+AGG | + | chr1_1:2289014-2289033 | Msa0000890:intron | 60.0% |
| GGAGTTTAGAGGGGAGGGGA+AGG | + | chr1_1:2289357-2289376 | Msa0000890:intron | 60.0% | |
| TTAGAGGGGAGGGGAAGGGA+AGG | + | chr1_1:2289362-2289381 | Msa0000890:intron | 60.0% | |
| GAGGGGAAGGGAAGGCTTTG+AGG | + | chr1_1:2289370-2289389 | Msa0000890:intron | 60.0% | |
| !! | GGGGAAGGGAAGGCTTTGAG+GGG | + | chr1_1:2289372-2289391 | Msa0000890:intron | 60.0% |
| !! | GAAGGGAAGGCTTTGAGGGG+TGG | + | chr1_1:2289375-2289394 | Msa0000890:intron | 60.0% |
| AATGGGAGGGGAGGGCTTTG+GGG | - | chr1_1:2289626-2289645 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | - | chr1_1:2289694-2289713 | None:intergenic | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+GGG | - | chr1_1:2289695-2289714 | None:intergenic | 60.0% | |
| TGGCGCGACTTCCTCGTGAT+AGG | + | chr1_1:2289805-2289824 | Msa0000890:intron | 60.0% | |
| GGCGCGACTTCCTCGTGATA+GGG | + | chr1_1:2289806-2289825 | Msa0000890:intron | 60.0% | |
| GCGCGACTTCCTCGTGATAG+GGG | + | chr1_1:2289807-2289826 | Msa0000890:intron | 60.0% | |
| GAGCTAAGGGAAGTGGGAGG+CGG | + | chr1_1:2291341-2291360 | Msa0000890:intron | 60.0% | |
| ATGAGCCAAGGGATGGAGGG+AGG | + | chr1_1:2291407-2291426 | Msa0000890:intron | 60.0% | |
| GGAAGGGGAAGGACCAAAGG+AGG | - | chr1_1:2291611-2291630 | None:intergenic | 60.0% | |
| CCGGCTGCAGTTAACTACCG+AGG | - | chr1_1:2292725-2292744 | None:intergenic | 60.0% | |
| TCGGCAGTTAACTGCCGAGG+GGG | + | chr1_1:2291881-2291900 | Msa0000890:intron | 60.0% | |
| TGGGAACTCCGGGAACGGAG+TGG | - | chr1_1:2283146-2283165 | None:intergenic | 65.0% | |
| GGCGGAGTGGGATGGAGAAG+CGG | - | chr1_1:2283171-2283190 | None:intergenic | 65.0% | |
| ! | GTCGCGTGTGTCGGCGGATA+AGG | - | chr1_1:2283270-2283289 | None:intergenic | 65.0% |
| !! | TAAGGCGCCGTCGCGTGTGT+CGG | - | chr1_1:2283279-2283298 | None:intergenic | 65.0% |
| CACGAGCGGAGATGCTCTCG+AGG | - | chr1_1:2283316-2283335 | None:intergenic | 65.0% | |
| !! | CTCGAGAGCATCTCCGCTCG+TGG | + | chr1_1:2283314-2283333 | Msa0000890:CDS | 65.0% |
| ATGGGGGTGAGCAGGTGCCT+TGG | - | chr1_1:2284950-2284969 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr1_1:2286286-2286305 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr1_1:2286301-2286320 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr1_1:2286305-2286324 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr1_1:2286306-2286325 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr1_1:2286317-2286336 | Msa0000890:intron | 65.0% |
| CCAGAGCGTGGTTAGCGGCT+TGG | - | chr1_1:2287346-2287365 | None:intergenic | 65.0% | |
| CCAAGCCGCTAACCACGCTC+TGG | + | chr1_1:2287343-2287362 | Msa0000890:intron | 65.0% | |
| GGAGGTGATGCTCCAGAGCG+TGG | - | chr1_1:2287358-2287377 | None:intergenic | 65.0% | |
| TAGGCCGGACGCTGTGGCAA+GGG | - | chr1_1:2288769-2288788 | None:intergenic | 65.0% | |
| ! | ATGGGAGGGGAGGGCTTTGG+GGG | - | chr1_1:2289625-2289644 | None:intergenic | 65.0% |
| GGGAAGGGAGGGGAAGGCTT+GGG | - | chr1_1:2289684-2289703 | None:intergenic | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+AGG | - | chr1_1:2289690-2289709 | None:intergenic | 65.0% | |
| GCGAGTTTGGAGGGGAAGGG+AGG | - | chr1_1:2289696-2289715 | None:intergenic | 65.0% | |
| AGCCAAGGGATGGAGGGAGG+TGG | + | chr1_1:2291410-2291429 | Msa0000890:intron | 65.0% | |
| CACCACCTCCCTCCATCCCT+TGG | - | chr1_1:2291415-2291434 | None:intergenic | 65.0% | |
| GAGCACGGAGAGGAGAGGAG+AGG | - | chr1_1:2291678-2291697 | None:intergenic | 65.0% | |
| ! | TAGGGGAGCACGGAGAGGAG+AGG | - | chr1_1:2291683-2291702 | None:intergenic | 65.0% |
| ! | AGGAGTAGGGGAGCACGGAG+AGG | - | chr1_1:2291688-2291707 | None:intergenic | 65.0% |
| GCGGAGGACCACTCCGTTCC+CGG | + | chr1_1:2283135-2283154 | Msa0000890:CDS | 70.0% | |
| GAAGCGGAGGCGGAGTGGGA+TGG | - | chr1_1:2283179-2283198 | None:intergenic | 70.0% | |
| !! | TGAGGTGGCGGAAGCGGAGG+CGG | - | chr1_1:2283189-2283208 | None:intergenic | 70.0% |
| !! | GGATGAGGTGGCGGAAGCGG+AGG | - | chr1_1:2283192-2283211 | None:intergenic | 70.0% |
| GGACCTCCTGTCACCGGTGC+CGG | + | chr1_1:2283539-2283558 | Msa0000890:CDS | 70.0% | |
| !! | ACCACCACCAGCACCGGCAC+CGG | - | chr1_1:2283555-2283574 | None:intergenic | 70.0% |
| CTAGGCCGGACGCTGTGGCA+AGG | - | chr1_1:2288770-2288789 | None:intergenic | 70.0% | |
| !! | TGGGAGGGGAGGGCTTTGGG+GGG | - | chr1_1:2289624-2289643 | None:intergenic | 70.0% |
| GGGGAAGGGAGGGGAAGGCT+TGG | - | chr1_1:2289685-2289704 | None:intergenic | 70.0% | |
| GGCGGAAGCGGAGGCGGAGT+GGG | - | chr1_1:2283183-2283202 | None:intergenic | 75.0% | |
| TGGCGGAAGCGGAGGCGGAG+TGG | - | chr1_1:2283184-2283203 | None:intergenic | 75.0% | |
| !! | GCACCGGCACCGGTGACAGG+AGG | - | chr1_1:2283545-2283564 | None:intergenic | 75.0% |
| !! | CCAGCACCGGCACCGGTGAC+AGG | - | chr1_1:2283548-2283567 | None:intergenic | 75.0% |
| !! | CCTGTCACCGGTGCCGGTGC+TGG | + | chr1_1:2283545-2283564 | Msa0000890:CDS | 75.0% |
| !! | GTCACCGGTGCCGGTGCTGG+TGG | + | chr1_1:2283548-2283567 | Msa0000890:CDS | 75.0% |
| !! | ACCGGTGCCGGTGCTGGTGG+TGG | + | chr1_1:2283551-2283570 | Msa0000890:CDS | 75.0% |
| ! | GGCGCCGTCGCGTGTGTCGG+CGG | - | chr1_1:2283276-2283295 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 2283061 | 2294214 | 2283061 | ID=Msa0000890;Name=Msa0000890 |
| chr1_1 | mRNA | 2283061 | 2294214 | 2283061 | ID=Msa0000890-mRNA-1;Parent=Msa0000890;Name=Msa0000890-mRNA-1;_AED=0.09;_eAED=0.09;_QI=61|0.83|0.84|1|1|1|13|114|553 |
| chr1_1 | exon | 2283061 | 2283679 | 2283061 | ID=Msa0000890-mRNA-1:exon:481;Parent=Msa0000890-mRNA-1 |
| chr1_1 | exon | 2284225 | 2284289 | 2284225 | ID=Msa0000890-mRNA-1:exon:482;Parent=Msa0000890-mRNA-1 |
| chr1_1 | exon | 2285093 | 2285173 | 2285093 | ID=Msa0000890-mRNA-1:exon:483;Parent=Msa0000890-mRNA-1 |
| chr1_1 | exon | 2286085 | 2286156 | 2286085 | ID=Msa0000890-mRNA-1:exon:484;Parent=Msa0000890-mRNA-1 |
| chr1_1 | exon | 2286764 | 2286932 | 2286764 | ID=Msa0000890-mRNA-1:exon:485;Parent=Msa0000890-mRNA-1 |
| chr1_1 | exon | 2288047 | 2288090 | 2288047 | ID=Msa0000890-mRNA-1:exon:486;Parent=Msa0000890-mRNA-1 |
| chr1_1 | exon | 2288412 | 2288511 | 2288412 | ID=Msa0000890-mRNA-1:exon:487;Parent=Msa0000890-mRNA-1 |
| chr1_1 | exon | 2290531 | 2290599 | 2290531 | ID=Msa0000890-mRNA-1:exon:488;Parent=Msa0000890-mRNA-1 |
| chr1_1 | exon | 2290920 | 2290968 | 2290920 | ID=Msa0000890-mRNA-1:exon:489;Parent=Msa0000890-mRNA-1 |
| chr1_1 | exon | 2292978 | 2293156 | 2292978 | ID=Msa0000890-mRNA-1:exon:490;Parent=Msa0000890-mRNA-1 |
| chr1_1 | exon | 2293291 | 2293384 | 2293291 | ID=Msa0000890-mRNA-1:exon:491;Parent=Msa0000890-mRNA-1 |
| chr1_1 | exon | 2293716 | 2293750 | 2293716 | ID=Msa0000890-mRNA-1:exon:492;Parent=Msa0000890-mRNA-1 |
| chr1_1 | exon | 2293954 | 2294214 | 2293954 | ID=Msa0000890-mRNA-1:exon:493;Parent=Msa0000890-mRNA-1 |
| chr1_1 | five_prime_UTR | 2283061 | 2283121 | 2283061 | ID=Msa0000890-mRNA-1:five_prime_utr;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2283122 | 2283679 | 2283122 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2284225 | 2284289 | 2284225 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2285093 | 2285173 | 2285093 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2286085 | 2286156 | 2286085 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2286764 | 2286932 | 2286764 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2288047 | 2288090 | 2288047 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2288412 | 2288511 | 2288412 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2290531 | 2290599 | 2290531 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2290920 | 2290968 | 2290920 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2292978 | 2293156 | 2292978 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2293291 | 2293384 | 2293291 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2293716 | 2293750 | 2293716 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | CDS | 2293954 | 2294100 | 2293954 | ID=Msa0000890-mRNA-1:cds;Parent=Msa0000890-mRNA-1 |
| chr1_1 | three_prime_UTR | 2294101 | 2294214 | 2294101 | ID=Msa0000890-mRNA-1:three_prime_utr;Parent=Msa0000890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
