AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0436100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0436100 MtrunA17_Chr3g0144221 95.103 633 14 2 1 632 1 617 0.0 1225
Msa0436100 MtrunA17_Chr1g0199651 52.083 480 211 3 4 482 8 469 4.42e-167 485
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0436100 AT1G76400.1 66.612 608 186 2 25 632 24 614 0.0 832
Msa0436100 AT1G76400.2 66.300 546 167 2 25 570 24 552 0.0 743
Msa0436100 AT2G01720.1 51.055 474 206 5 14 481 10 463 1.38e-160 469

Find 158 sgRNAs with CRISPR-Local

Find 493 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGACTTCTGCATCTTATT+TGG 0.144569 3_2:-89436121 Msa0436100:CDS
CATCGTTGCGTGATCTTTCT+AGG 0.176304 3_2:-89435925 Msa0436100:CDS
GAGCCGTTGATGTTGATTTC+TGG 0.180181 3_2:-89436201 Msa0436100:CDS
CTGGAAATGGTTGCAATATA+TGG 0.199405 3_2:+89440317 None:intergenic
ACTGTCTAGAAGTATGTTTC+TGG 0.210627 3_2:+89435195 None:intergenic
CGCTTCCTTAATATCTCTTT+TGG 0.225268 3_2:-89439516 Msa0436100:CDS
CAAGTAAAACAAGGTCAAAA+TGG 0.248950 3_2:+89435436 None:intergenic
GTCAATCACCAAATCATTAA+TGG 0.250801 3_2:+89439488 None:intergenic
CCACTTCAGGACTTCTTGTT+TGG 0.252717 3_2:-89439552 Msa0436100:CDS
ACAAGAGATTTATGATCTTA+TGG 0.256694 3_2:-89435514 Msa0436100:CDS
TCGCCCTTCCCAAGGCCTTT+AGG 0.289486 3_2:+89440373 None:intergenic
TACTCTTGCGCCTGTATTGC+AGG 0.289724 3_2:-89436259 Msa0436100:CDS
TGCAAATCTGCTGCAATTAC+AGG 0.293179 3_2:-89441510 Msa0436100:five_prime_UTR
AAGGAAGAGGGAATATCTTT+AGG 0.294373 3_2:+89440418 None:intergenic
TGTCTTTCTTTCACAGGAAA+TGG 0.294905 3_2:+89439088 None:intergenic
CTGCTGCAGACTTGACTATC+AGG 0.298525 3_2:-89439869 Msa0436100:intron
AAGTGCTTTACATGGTTATC+AGG 0.308889 3_2:+89440526 None:intergenic
TGGATATGGGTTGCCACTTC+AGG 0.311465 3_2:-89439565 Msa0436100:CDS
GCTGGAAAATACAAAACTTC+AGG 0.319386 3_2:-89440164 Msa0436100:CDS
GGGAACCAAAAGAGATATTA+AGG 0.322733 3_2:+89439511 None:intergenic
TGCTAAGGAGAGAGATTTGC+AGG 0.327633 3_2:-89435649 Msa0436100:CDS
TCAATCACCAAATCATTAAT+GGG 0.328904 3_2:+89439489 None:intergenic
TTTAGGGCGGACAACTTCAT+AGG 0.340630 3_2:+89440435 None:intergenic
AGGGCTGATTATTCTCAAAA+TGG 0.345796 3_2:+89440077 None:intergenic
CATATATATACACTAGAATA+AGG 0.350488 3_2:-89435298 Msa0436100:three_prime_UTR
TATTTCCACTTCTAGTTTGT+GGG 0.353054 3_2:-89439749 Msa0436100:CDS
GATTGTTATGAGAAGAAGTT+AGG 0.359037 3_2:-89435594 Msa0436100:CDS
ATATTTCCACTTCTAGTTTG+TGG 0.370550 3_2:-89439750 Msa0436100:CDS
GAGCATTATAATCTTGTTCA+TGG 0.371780 3_2:-89439989 Msa0436100:CDS
TTCTCAAAATGGATAACAAT+TGG 0.382836 3_2:+89440088 None:intergenic
GTAACTTTACCTAAAGGCCT+TGG 0.391130 3_2:-89440382 Msa0436100:CDS
CAGGGATCTGAATTGAAATA+TGG 0.392730 3_2:-89440145 Msa0436100:CDS
CTGGTTCAGTGAGAGCGTTT+TGG 0.397574 3_2:-89441482 Msa0436100:five_prime_UTR
TAAGAGGTGCATCTGCCTTT+AGG 0.408931 3_2:-89439834 Msa0436100:CDS
AGGAAGAGGGAATATCTTTA+GGG 0.416520 3_2:+89440419 None:intergenic
ATATAGTATTTGACTTTAGT+AGG 0.416708 3_2:-89436291 Msa0436100:intron
GGAAAGGCGAAATCATCTTC+TGG 0.418481 3_2:-89440469 Msa0436100:CDS
GAGCTCATTCTGTTTACTAC+AGG 0.418845 3_2:-89439786 Msa0436100:CDS
GATTGGACCTTCACGGGATA+AGG 0.432111 3_2:+89440232 None:intergenic
GAGGAAGGGAAATTGAAAAT+CGG 0.432426 3_2:-89435572 Msa0436100:CDS
ATGAGAAGAAGTTAGGAGGA+AGG 0.433364 3_2:-89435587 Msa0436100:CDS
GGATGAGATCGGAGAGGACC+TGG 0.435073 3_2:+89441356 None:intergenic
CCGCACCACTACCACTCTTA+AGG 0.447901 3_2:-89441142 Msa0436100:intron
GTAATTTAACATTGAGCGAT+TGG 0.448219 3_2:+89440215 None:intergenic
ACCTCATGTCTTTCTTTCAC+AGG 0.448961 3_2:+89439082 None:intergenic
GACTTCTTGTTTGGAGTCGA+TGG 0.451851 3_2:-89439543 Msa0436100:CDS
TAACTTTACCTAAAGGCCTT+GGG 0.455605 3_2:-89440381 Msa0436100:CDS
TTATAATAGACCTGCAATAC+AGG 0.458777 3_2:+89436249 None:intergenic
GGTTCAAGCAACTATTCATC+AGG 0.459505 3_2:-89435996 Msa0436100:CDS
GTTTACTACAGGGATGAAAT+CGG 0.459929 3_2:-89439775 Msa0436100:CDS
TATTCTGTAACTTTACCTAA+AGG 0.460646 3_2:-89440388 Msa0436100:CDS
TTCTTCTCTAGCACGACAAC+AGG 0.460738 3_2:+89438931 None:intergenic
TCAACCGTCTTTCTATGCTC+AGG 0.463333 3_2:-89436224 Msa0436100:CDS
GGAGATTGAGATATCCCATT+GGG 0.465275 3_2:-89440029 Msa0436100:CDS
AGCAACGACTAATGATACTA+TGG 0.470319 3_2:+89435972 None:intergenic
TAAAGATATTCCCTCTTCCT+TGG 0.470995 3_2:-89440416 Msa0436100:CDS
TCTAGGACAGGTGATATTCA+AGG 0.471596 3_2:-89435908 Msa0436100:CDS
TGGAAATGGTTGCAATATAT+GGG 0.474469 3_2:+89440318 None:intergenic
TGAGAAGAAGTTAGGAGGAA+GGG 0.475108 3_2:-89435586 Msa0436100:CDS
CTGGAAAATACAAAACTTCA+GGG 0.476503 3_2:-89440163 Msa0436100:CDS
AAGTAAAACAAGGTCAAAAT+GGG 0.479563 3_2:+89435437 None:intergenic
AATGGAGGAAGATTCTCATA+TGG 0.481992 3_2:+89440121 None:intergenic
GCGAAATCATCTTCTGGTGT+TGG 0.483362 3_2:-89440463 Msa0436100:CDS
GCAGATGCACCTCTTACATA+TGG 0.485700 3_2:+89439841 None:intergenic
GGTAATATTTGAGCGGCTTG+TGG 0.494892 3_2:+89435797 None:intergenic
GCTGCAATTACAGGGATCTC+TGG 0.496760 3_2:-89441501 Msa0436100:five_prime_UTR
ACTTACACGACGGTCAACTT+TGG 0.499801 3_2:+89441330 None:intergenic
CTTATTTGGCAAAGATCCAA+TGG 0.502030 3_2:-89436107 Msa0436100:CDS
CTTGGCAGTAAGACGCCTAA+AGG 0.502523 3_2:+89439819 None:intergenic
TTGCGTGATCTTTCTAGGAC+AGG 0.503122 3_2:-89435920 Msa0436100:CDS
CAAATAAGATGCAGAAGTCT+TGG 0.505500 3_2:+89436122 None:intergenic
GAGCACCTTAAGAGTGGTAG+TGG 0.506326 3_2:+89441137 None:intergenic
ATTGAGCGATTGGACCTTCA+CGG 0.508824 3_2:+89440225 None:intergenic
AGTTGATTACCTCTTCCCAT+TGG 0.512116 3_2:+89436091 None:intergenic
AATAGAGTCCTACACAAAGC+TGG 0.512238 3_2:-89440182 Msa0436100:CDS
AGAATAAGTTGCCAAGGAAG+AGG 0.516063 3_2:+89440405 None:intergenic
TGCACCTCTTACATATGGCC+TGG 0.517740 3_2:+89439846 None:intergenic
TTGAGCGATTGGACCTTCAC+GGG 0.522891 3_2:+89440226 None:intergenic
TAGGACTCTATTCTTGCCTC+AGG 0.522970 3_2:+89440193 None:intergenic
GAGGACCTGGGAGGATAGAA+TGG 0.523253 3_2:+89441369 None:intergenic
CAAAATGGATAACAATTGGC+AGG 0.524969 3_2:+89440092 None:intergenic
ATGAGCTCTTGGTGGCAGCT+TGG 0.525565 3_2:+89439801 None:intergenic
GAATAAGTTGCCAAGGAAGA+GGG 0.531898 3_2:+89440406 None:intergenic
TTCACAGGAAATGGAACAGA+TGG 0.535738 3_2:+89439097 None:intergenic
TAGTAAACAGAATGAGCTCT+TGG 0.535990 3_2:+89439790 None:intergenic
CTTTCAGGTTGTCTTGCCAG+AGG 0.536714 3_2:-89439137 Msa0436100:intron
ACAATTGGCAGGTATGAGAA+TGG 0.537574 3_2:+89440103 None:intergenic
TTTCAGGTTGTCTTGCCAGA+GGG 0.540711 3_2:-89439136 Msa0436100:intron
AACTCTTTAGCAACGGCGAA+GGG 0.542494 3_2:+89440058 None:intergenic
TGATCTGTACATTGCCCCAA+TGG 0.542650 3_2:+89440014 None:intergenic
TGAAAATGCTCATTATGCTC+AGG 0.547728 3_2:+89438898 None:intergenic
TGTTATGAGAAGAAGTTAGG+AGG 0.549117 3_2:-89435591 Msa0436100:CDS
CAGGCCAGGCCATATGTAAG+AGG 0.549205 3_2:-89439850 Msa0436100:CDS
CACGACGGTCAACTTTGGTA+AGG 0.549384 3_2:+89441335 None:intergenic
CTAGGACAGGTGATATTCAA+GGG 0.554420 3_2:-89435907 Msa0436100:CDS
CTTCGCCGTTGCTAAAGAGT+TGG 0.554612 3_2:-89440056 Msa0436100:CDS
CAACCGTCTTTCTATGCTCA+GGG 0.556453 3_2:-89436223 Msa0436100:CDS
TTACCTAAAGGCCTTGGGAA+GGG 0.556651 3_2:-89440376 Msa0436100:CDS
TCAAACTTTCGCCCTTCCCA+AGG 0.557699 3_2:+89440365 None:intergenic
GTCACCCCACAAACTAGAAG+TGG 0.557838 3_2:+89439744 None:intergenic
TTATTTGGCAAAGATCCAAT+GGG 0.565258 3_2:-89436106 Msa0436100:CDS
CTTTACATGGTTATCAGGAA+AGG 0.566975 3_2:+89440531 None:intergenic
AGCAACACTTAACGAAGGAA+AGG 0.568080 3_2:-89440491 Msa0436100:CDS
TGTATGCTAAGTGCTTTACA+TGG 0.568391 3_2:+89440518 None:intergenic
ATTTCCACTTCTAGTTTGTG+GGG 0.568670 3_2:-89439748 Msa0436100:CDS
GGCAAAGATCCAATGGGAAG+AGG 0.571287 3_2:-89436100 Msa0436100:intron
TGCAAAATGGTAAATGAGCA+TGG 0.575856 3_2:-89441577 None:intergenic
TTAGGGCGGACAACTTCATA+GGG 0.576553 3_2:+89440436 None:intergenic
GCAGACTTGACTATCAGGCC+AGG 0.579305 3_2:-89439864 Msa0436100:intron
GCAACACTTAACGAAGGAAA+GGG 0.580045 3_2:-89440490 Msa0436100:CDS
GAAGGGCGAAAGTTTGACGT+TGG 0.580960 3_2:-89440359 Msa0436100:CDS
GTGTCGCAGGTAGAGAATGC+AGG 0.581081 3_2:-89440583 Msa0436100:intron
TCTTTCTCCTTATCCCGTGA+AGG 0.581200 3_2:-89440239 Msa0436100:CDS
TTTACCTAAAGGCCTTGGGA+AGG 0.581516 3_2:-89440377 Msa0436100:CDS
CAATCACCAAATCATTAATG+GGG 0.584647 3_2:+89439490 None:intergenic
GACCTTGGGTAATATTTGAG+CGG 0.585756 3_2:+89435790 None:intergenic
AGTTACAGAATAAGTTGCCA+AGG 0.586321 3_2:+89440399 None:intergenic
TAAACAGAATGAGCTCTTGG+TGG 0.587661 3_2:+89439793 None:intergenic
CCAAACAAGAAGTCCTGAAG+TGG 0.588215 3_2:+89439552 None:intergenic
ATTTACCATTCTATCCTCCC+AGG 0.591306 3_2:-89441374 Msa0436100:CDS
AACTTTGAGCACCTTAAGAG+TGG 0.594308 3_2:+89441131 None:intergenic
CCGTTGCTAAAGAGTTGGTG+AGG 0.595956 3_2:-89440051 Msa0436100:CDS
AGATTTGCAGGAGAAGCGTA+TGG 0.596478 3_2:-89435637 Msa0436100:CDS
CAACTCTTTAGCAACGGCGA+AGG 0.602379 3_2:+89440057 None:intergenic
AACTTTGGTAAGGATGAGAT+CGG 0.602673 3_2:+89441345 None:intergenic
CATGGCGGTGCTCAGAGCAA+AGG 0.603405 3_2:-89439971 Msa0436100:CDS
GATGAGATCGGAGAGGACCT+GGG 0.604322 3_2:+89441357 None:intergenic
GCAAATCTGCTGCAATTACA+GGG 0.604639 3_2:-89441509 Msa0436100:five_prime_UTR
AGCTCATTCTGTTTACTACA+GGG 0.610364 3_2:-89439785 Msa0436100:CDS
GTCTGCATGCATGTAGACAA+TGG 0.610818 3_2:+89436155 None:intergenic
AACATTCGAACAAGAAACAA+AGG 0.611122 3_2:-89441553 Msa0436100:five_prime_UTR
GATTGACACTCTTGTTGTGA+AGG 0.615337 3_2:-89439472 Msa0436100:intron
GGTGGAGGAAGTAATTGCTA+AGG 0.617368 3_2:-89435664 Msa0436100:CDS
GATCTGTACATTGCCCCAAT+GGG 0.625357 3_2:+89440015 None:intergenic
ATTTCATGATGACGATGATG+AGG 0.626481 3_2:-89441426 Msa0436100:exon
AAGTGGCAACCCATATCCAA+TGG 0.630677 3_2:+89439569 None:intergenic
AAGCCAGAAATCAACATCAA+CGG 0.631560 3_2:+89436198 None:intergenic
GGGAGATTGAGATATCCCAT+TGG 0.633387 3_2:-89440030 Msa0436100:CDS
AGCCGCTCAAATATTACCCA+AGG 0.639940 3_2:-89435792 Msa0436100:intron
CGTTGCTAAAGAGTTGGTGA+GGG 0.643300 3_2:-89440050 Msa0436100:CDS
ACTTAACGAAGGAAAGGGAA+AGG 0.652066 3_2:-89440485 Msa0436100:CDS
TCCTGTGAAAGAAAGACATG+AGG 0.667785 3_2:-89439083 Msa0436100:intron
GCTCCCTGAGCATAGAAAGA+CGG 0.670119 3_2:+89436220 None:intergenic
GCTCAATGTTAAATTACCTG+AGG 0.670175 3_2:-89440209 Msa0436100:CDS
AATCACCAAATCATTAATGG+GGG 0.672170 3_2:+89439491 None:intergenic
CCTCACCAACTCTTTAGCAA+CGG 0.676013 3_2:+89440051 None:intergenic
CCTTAAGAGTGGTAGTGGTG+CGG 0.677361 3_2:+89441142 None:intergenic
GAACTAAATCAAGTAAAACA+AGG 0.678884 3_2:+89435427 None:intergenic
ATTGGCAGGTATGAGAATGG+AGG 0.680768 3_2:+89440106 None:intergenic
AAGAGGGAATATCTTTAGGG+CGG 0.682262 3_2:+89440422 None:intergenic
ATGTCAGCAACACTTAACGA+AGG 0.697211 3_2:-89440496 Msa0436100:CDS
CTCGTTGAAAGAGCTCACAA+AGG 0.716021 3_2:-89435855 Msa0436100:CDS
CATTATAATCTTGTTCATGG+CGG 0.724346 3_2:-89439986 Msa0436100:CDS
CAGAACTTGAGATCGAACCT+CGG 0.724721 3_2:-89439626 Msa0436100:CDS
GAGATTGAGATATCCCATTG+GGG 0.726808 3_2:-89440028 Msa0436100:CDS
TGGTAAGGATGAGATCGGAG+AGG 0.732813 3_2:+89441350 None:intergenic
GAGATCGGAGAGGACCTGGG+AGG 0.742940 3_2:+89441360 None:intergenic
TGCATGCATGTAGACAATGG+AGG 0.747749 3_2:+89436158 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTTTGTG+TGG - chr3_2:89435645-89435664 Msa0436100:CDS 10.0%
!!! TTTTTTTTTTTTTTTTGTGT+GGG - chr3_2:89435646-89435665 Msa0436100:CDS 10.0%
!!! AAAAATTCATTTTATATTGT+TGG + chr3_2:89437923-89437942 None:intergenic 10.0%
!!! AAATTATTTTCCATTTTTTA+TGG + chr3_2:89439101-89439120 None:intergenic 10.0%
!!! TTATTTTATTTTTGTTTTTC+AGG - chr3_2:89441052-89441071 Msa0436100:intron 10.0%
!!! AAAGTTAAATTACAAAGTTT+TGG + chr3_2:89435696-89435715 None:intergenic 15.0%
!! AAGAATAATAAATGTTGTAT+TGG - chr3_2:89438162-89438181 Msa0436100:intron 15.0%
!!! AAATAATTTGAAATTTTTGC+TGG - chr3_2:89439112-89439131 Msa0436100:CDS 15.0%
!!! ATATGATATTTGAAGTATTT+TGG + chr3_2:89438716-89438735 None:intergenic 15.0%
!!! TTCAAGATACTTTTTTTTTT+TGG - chr3_2:89439426-89439445 Msa0436100:intron 15.0%
!!! ACAATTAGGTTATTTTATAT+CGG + chr3_2:89440253-89440272 None:intergenic 15.0%
!!! TTTTTTTTGTACAAACAATT+AGG + chr3_2:89440267-89440286 None:intergenic 15.0%
!! AGAATTGAAAAATCTTAGAT+CGG + chr3_2:89435475-89435494 None:intergenic 20.0%
!!! TGAACTTTAGTTTAAAAACT+TGG - chr3_2:89435950-89435969 Msa0436100:CDS 20.0%
!! AAGAAAGTAAAATTATGTGT+TGG + chr3_2:89437313-89437332 None:intergenic 20.0%
!!! AATTCATTTTATATTGTTGG+TGG + chr3_2:89437920-89437939 None:intergenic 20.0%
!! TCTTAAAAATAAGATGTTTG+TGG + chr3_2:89437959-89437978 None:intergenic 20.0%
!! CCACTAACTATAATTAATAA+GGG + chr3_2:89438095-89438114 None:intergenic 20.0%
!! TCCACTAACTATAATTAATA+AGG + chr3_2:89438096-89438115 None:intergenic 20.0%
!! TGATTGAAATGCAATAAATA+AGG - chr3_2:89438125-89438144 Msa0436100:intron 20.0%
!! GATTGAAATGCAATAAATAA+GGG - chr3_2:89438126-89438145 Msa0436100:intron 20.0%
!!! AATAAATAAGGGTATGTTAA+TGG - chr3_2:89438137-89438156 Msa0436100:intron 20.0%
!!! TACTGGTTTTATTATTGAAT+TGG - chr3_2:89438311-89438330 Msa0436100:intron 20.0%
!!! ACTGGTTTTATTATTGAATT+GGG - chr3_2:89438312-89438331 Msa0436100:intron 20.0%
!! AGCTTGAAAATAGTTTATAA+TGG - chr3_2:89438413-89438432 Msa0436100:intron 20.0%
!!! GTTTGATTTTGATTGAATTA+AGG + chr3_2:89438798-89438817 None:intergenic 20.0%
!! CAAAACTATTGAATACAAAA+TGG - chr3_2:89438968-89438987 Msa0436100:intron 20.0%
!!! GTTTGATTTTGATTGAATTA+AGG + chr3_2:89438798-89438817 None:intergenic 20.0%
!! TTGTAACATTCCAATTAAAT+TGG + chr3_2:89439819-89439838 None:intergenic 20.0%
!!! AAAAACCCTTTTTTTTACAT+GGG + chr3_2:89439921-89439940 None:intergenic 20.0%
!!! AAAAAACCCTTTTTTTTACA+TGG + chr3_2:89439922-89439941 None:intergenic 20.0%
!!! CAATTAGGTTATTTTATATC+GGG + chr3_2:89440252-89440271 None:intergenic 20.0%
!!! CTTTTAAAATGTGAACAATT+AGG + chr3_2:89440293-89440312 None:intergenic 20.0%
!!! ATTTGATTACTTTTTGTACA+GGG - chr3_2:89440403-89440422 Msa0436100:CDS 20.0%
!!! ATATAGTATTTGACTTTAGT+AGG - chr3_2:89440446-89440465 Msa0436100:CDS 20.0%
!!! TTTTATTTTTGTTTTTCAGG+TGG - chr3_2:89441055-89441074 Msa0436100:intron 20.0%
!!! TTTAGTTCAGAAATTTTTAG+CGG - chr3_2:89441325-89441344 Msa0436100:intron 20.0%
!! CATATATATACACTAGAATA+AGG - chr3_2:89441439-89441458 Msa0436100:exon 20.0%
!! AAGTCTTCATTTCATCTTTT+AGG - chr3_2:89435426-89435445 Msa0436100:three_prime_UTR 25.0%
!! AGTCTTCATTTCATCTTTTA+GGG - chr3_2:89435427-89435446 Msa0436100:three_prime_UTR 25.0%
! TAATTAGTATTTATCGATGC+TGG - chr3_2:89435494-89435513 Msa0436100:CDS 25.0%
!!! TTTTTTTTTTTTTGTGTGGG+TGG - chr3_2:89435649-89435668 Msa0436100:CDS 25.0%
!!! TTTTTTTTTTTTGTGTGGGT+GGG - chr3_2:89435650-89435669 Msa0436100:CDS 25.0%
!! TGTCATTGTATTTTATCATG+TGG + chr3_2:89435886-89435905 None:intergenic 25.0%
! ACATGATAAAATACAATGAC+AGG - chr3_2:89435885-89435904 Msa0436100:CDS 25.0%
! CATGATAAAATACAATGACA+GGG - chr3_2:89435886-89435905 Msa0436100:CDS 25.0%
! TATTCTGTAACTTTACCTAA+AGG - chr3_2:89436349-89436368 Msa0436100:intron 25.0%
! TTCTCAAAATGGATAACAAT+TGG + chr3_2:89436652-89436671 None:intergenic 25.0%
! TCAATCACCAAATCATTAAT+GGG + chr3_2:89437251-89437270 None:intergenic 25.0%
!!! TCATTATTTTGTTGCAAACT+TGG - chr3_2:89437341-89437360 Msa0436100:intron 25.0%
!!! TTTACCTGTATATTTTTCAG+AGG - chr3_2:89437412-89437431 Msa0436100:intron 25.0%
! ACATAGATATCTATCATCTA+TGG + chr3_2:89437707-89437726 None:intergenic 25.0%
!!! TATTACTGTTGCATCTTTTT+TGG - chr3_2:89437864-89437883 Msa0436100:intron 25.0%
! CCCTTATTAATTATAGTTAG+TGG - chr3_2:89438092-89438111 Msa0436100:intron 25.0%
!! TGTTGTATTGGTATTGTAAA+AGG - chr3_2:89438174-89438193 Msa0436100:intron 25.0%
!! GTTGTATTGGTATTGTAAAA+GGG - chr3_2:89438175-89438194 Msa0436100:intron 25.0%
!! TTTGCAGTTTTCTTTTCTAT+TGG - chr3_2:89438357-89438376 Msa0436100:intron 25.0%
!! CTCTTTTCATTATGAAACTT+AGG + chr3_2:89438389-89438408 None:intergenic 25.0%
!!! CCAGATTAGATTTTTTACAT+TGG + chr3_2:89438482-89438501 None:intergenic 25.0%
! CCAATGTAAAAAATCTAATC+TGG - chr3_2:89438479-89438498 Msa0436100:intron 25.0%
! TTGTAACCTACCATTTAATT+TGG + chr3_2:89438946-89438965 None:intergenic 25.0%
! TTGTAGGATACTAGATTTAT+TGG - chr3_2:89439185-89439204 Msa0436100:intron 25.0%
! TGTAGGATACTAGATTTATT+GGG - chr3_2:89439186-89439205 Msa0436100:intron 25.0%
! ACATTGCATTATTATATGCA+GGG + chr3_2:89439523-89439542 None:intergenic 25.0%
! AAACATAACTCCAAATTCTA+AGG - chr3_2:89439649-89439668 Msa0436100:intron 25.0%
! AACATAACTCCAAATTCTAA+GGG - chr3_2:89439650-89439669 Msa0436100:intron 25.0%
! GTAAGATACTAGATTGAATT+GGG - chr3_2:89440001-89440020 Msa0436100:CDS 25.0%
!! GCTCTTTATAAACTATTTTC+AGG + chr3_2:89440184-89440203 None:intergenic 25.0%
!!! GATTTGATTACTTTTTGTAC+AGG - chr3_2:89440402-89440421 Msa0436100:CDS 25.0%
! TCTTTACTTGCAAATGATTA+TGG - chr3_2:89440685-89440704 Msa0436100:intron 25.0%
! TATGGAACTATAAATCAAGA+GGG + chr3_2:89441031-89441050 None:intergenic 25.0%
! TTATGGAACTATAAATCAAG+AGG + chr3_2:89441032-89441051 None:intergenic 25.0%
! ACAAGAGATTTATGATCTTA+TGG - chr3_2:89441223-89441242 Msa0436100:intron 25.0%
! AAGTAAAACAAGGTCAAAAT+GGG + chr3_2:89441303-89441322 None:intergenic 25.0%
! GAACTAAATCAAGTAAAACA+AGG + chr3_2:89441313-89441332 None:intergenic 25.0%
!!! CAAAGTTTTTAAGAAATGAG+GGG + chr3_2:89441515-89441534 None:intergenic 25.0%
!!! GCAAAGTTTTTAAGAAATGA+GGG + chr3_2:89441516-89441535 None:intergenic 25.0%
!!! AGCAAAGTTTTTAAGAAATG+AGG + chr3_2:89441517-89441536 None:intergenic 25.0%
AACATTCGAACAAGAAACAA+AGG - chr3_2:89435184-89435203 Msa0436100:three_prime_UTR 30.0%
AGATCAATCTGCAAACAATA+GGG + chr3_2:89435560-89435579 None:intergenic 30.0%
GCATCAAAGGAAATAAGATA+AGG + chr3_2:89436098-89436117 None:intergenic 30.0%
TGGAAATGGTTGCAATATAT+GGG + chr3_2:89436422-89436441 None:intergenic 30.0%
GTAATTTAACATTGAGCGAT+TGG + chr3_2:89436525-89436544 None:intergenic 30.0%
CTGGAAAATACAAAACTTCA+GGG - chr3_2:89436574-89436593 Msa0436100:intron 30.0%
GAGCATTATAATCTTGTTCA+TGG - chr3_2:89436748-89436767 Msa0436100:intron 30.0%
CATTATAATCTTGTTCATGG+CGG - chr3_2:89436751-89436770 Msa0436100:intron 30.0%
AATTCAGAATCACAGAAACA+AGG + chr3_2:89436808-89436827 None:intergenic 30.0%
!! ATATTTCCACTTCTAGTTTG+TGG - chr3_2:89436987-89437006 Msa0436100:intron 30.0%
!! TATTTCCACTTCTAGTTTGT+GGG - chr3_2:89436988-89437007 Msa0436100:intron 30.0%
AATCACCAAATCATTAATGG+GGG + chr3_2:89437249-89437268 None:intergenic 30.0%
CAATCACCAAATCATTAATG+GGG + chr3_2:89437250-89437269 None:intergenic 30.0%
GTCAATCACCAAATCATTAA+TGG + chr3_2:89437252-89437271 None:intergenic 30.0%
! AGTTCCTCTGAAAAATATAC+AGG + chr3_2:89437419-89437438 None:intergenic 30.0%
!!! TTTTTCCTGCTTTTTGTCAT+TGG - chr3_2:89437515-89437534 Msa0436100:intron 30.0%
GTCATTGTAGTATATTGTGT+AGG - chr3_2:89437543-89437562 Msa0436100:intron 30.0%
AGATATCTATCATCTATGGT+TGG + chr3_2:89437703-89437722 None:intergenic 30.0%
ATCTATGTCATTCCATTGTT+TGG - chr3_2:89437719-89437738 Msa0436100:intron 30.0%
TCTATGTCATTCCATTGTTT+GGG - chr3_2:89437720-89437739 Msa0436100:intron 30.0%
CTTTGTCTGCAACAATTATA+TGG + chr3_2:89437759-89437778 None:intergenic 30.0%
ATATCCTGAATTTCATGTAC+TGG - chr3_2:89438294-89438313 Msa0436100:intron 30.0%
AAAACCAGTACATGAAATTC+AGG + chr3_2:89438301-89438320 None:intergenic 30.0%
TGAAAGTTGAAAATAAGCCT+AGG + chr3_2:89438576-89438595 None:intergenic 30.0%
TTGTAACCAACCAGTTAATT+TGG + chr3_2:89438911-89438930 None:intergenic 30.0%
CAAAACAGCTCCAAATTAAA+TGG - chr3_2:89438933-89438952 Msa0436100:CDS 30.0%
TTCAAATGTCACAGTATTGT+AGG - chr3_2:89439169-89439188 Msa0436100:intron 30.0%
TGATACACGATTCAAAAAAG+TGG + chr3_2:89439326-89439345 None:intergenic 30.0%
ACCTTATAAGGTGAATAAGT+GGG - chr3_2:89439474-89439493 Msa0436100:CDS 30.0%
CATTGCATTATTATATGCAG+GGG + chr3_2:89439522-89439541 None:intergenic 30.0%
GACATTGCATTATTATATGC+AGG + chr3_2:89439524-89439543 None:intergenic 30.0%
GGGAATAGTTCCAATTTAAT+TGG - chr3_2:89439806-89439825 Msa0436100:CDS 30.0%
GTTGACCCTATAATATTTGA+CGG - chr3_2:89439863-89439882 Msa0436100:CDS 30.0%
TTGACCCTATAATATTTGAC+GGG - chr3_2:89439864-89439883 Msa0436100:intron 30.0%
!!! AAAAAAAGGGTTTTTTCTGC+CGG - chr3_2:89439926-89439945 Msa0436100:intron 30.0%
CGTAAGATACTAGATTGAAT+TGG - chr3_2:89440000-89440019 Msa0436100:CDS 30.0%
TAGATTGAATTGGGATACAT+GGG - chr3_2:89440010-89440029 Msa0436100:CDS 30.0%
TCTAACCTTCATACTTAGAT+GGG + chr3_2:89440344-89440363 None:intergenic 30.0%
ATCTAACCTTCATACTTAGA+TGG + chr3_2:89440345-89440364 None:intergenic 30.0%
TTATAATAGACCTGCAATAC+AGG + chr3_2:89440491-89440510 None:intergenic 30.0%
TTATTTGGCAAAGATCCAAT+GGG - chr3_2:89440631-89440650 Msa0436100:intron 30.0%
!! ACACTTTTGTTTCATCATTC+AGG - chr3_2:89440720-89440739 Msa0436100:intron 30.0%
! AATATTACCCAAGGTCATTT+TGG - chr3_2:89440954-89440973 Msa0436100:intron 30.0%
! ATCAAGAGGGAAATTTTATG+TGG + chr3_2:89441018-89441037 None:intergenic 30.0%
!!! TATTTTTGTTTTTCAGGTGG+AGG - chr3_2:89441058-89441077 Msa0436100:intron 30.0%
GATTGTTATGAGAAGAAGTT+AGG - chr3_2:89441143-89441162 Msa0436100:CDS 30.0%
CAAGTAAAACAAGGTCAAAA+TGG + chr3_2:89441304-89441323 None:intergenic 30.0%
! ATTTCATGATGACGATGATG+AGG - chr3_2:89435311-89435330 Msa0436100:three_prime_UTR 35.0%
AACTTTGGTAAGGATGAGAT+CGG + chr3_2:89435395-89435414 None:intergenic 35.0%
TGAAATGAAGACTTACACGA+CGG + chr3_2:89435420-89435439 None:intergenic 35.0%
TGCAAACAATAGGGAAACAA+TGG + chr3_2:89435551-89435570 None:intergenic 35.0%
CAGATCAATCTGCAAACAAT+AGG + chr3_2:89435561-89435580 None:intergenic 35.0%
AAGTTCTGTAGACAACAACA+TGG + chr3_2:89435842-89435861 None:intergenic 35.0%
TTCATACTTGTGCAAATGAG+AGG - chr3_2:89436006-89436025 Msa0436100:intron 35.0%
GAGCAATTACATTTAGCAAG+TGG + chr3_2:89436067-89436086 None:intergenic 35.0%
AAAGTAAATCGCAGCATCAA+AGG + chr3_2:89436111-89436130 None:intergenic 35.0%
CTTTACATGGTTATCAGGAA+AGG + chr3_2:89436209-89436228 None:intergenic 35.0%
AAGTGCTTTACATGGTTATC+AGG + chr3_2:89436214-89436233 None:intergenic 35.0%
TGTATGCTAAGTGCTTTACA+TGG + chr3_2:89436222-89436241 None:intergenic 35.0%
AGGAAGAGGGAATATCTTTA+GGG + chr3_2:89436321-89436340 None:intergenic 35.0%
AAGGAAGAGGGAATATCTTT+AGG + chr3_2:89436322-89436341 None:intergenic 35.0%
TAAAGATATTCCCTCTTCCT+TGG - chr3_2:89436321-89436340 Msa0436100:intron 35.0%
AGTTACAGAATAAGTTGCCA+AGG + chr3_2:89436341-89436360 None:intergenic 35.0%
TAACTTTACCTAAAGGCCTT+GGG - chr3_2:89436356-89436375 Msa0436100:intron 35.0%
CTGGAAATGGTTGCAATATA+TGG + chr3_2:89436423-89436442 None:intergenic 35.0%
!! TGCGTAATTTTCTCTGGAAA+TGG + chr3_2:89436436-89436455 None:intergenic 35.0%
GCTCAATGTTAAATTACCTG+AGG - chr3_2:89436528-89436547 Msa0436100:intron 35.0%
!! TGTATTTTCCAGCTTTGTGT+AGG + chr3_2:89436566-89436585 None:intergenic 35.0%
GCTGGAAAATACAAAACTTC+AGG - chr3_2:89436573-89436592 Msa0436100:intron 35.0%
CAGGGATCTGAATTGAAATA+TGG - chr3_2:89436592-89436611 Msa0436100:intron 35.0%
AATGGAGGAAGATTCTCATA+TGG + chr3_2:89436619-89436638 None:intergenic 35.0%
CAAAATGGATAACAATTGGC+AGG + chr3_2:89436648-89436667 None:intergenic 35.0%
AGGGCTGATTATTCTCAAAA+TGG + chr3_2:89436663-89436682 None:intergenic 35.0%
TAGTAAACAGAATGAGCTCT+TGG + chr3_2:89436950-89436969 None:intergenic 35.0%
AGCTCATTCTGTTTACTACA+GGG - chr3_2:89436952-89436971 Msa0436100:intron 35.0%
GTTTACTACAGGGATGAAAT+CGG - chr3_2:89436962-89436981 Msa0436100:intron 35.0%
!! ATTTCCACTTCTAGTTTGTG+GGG - chr3_2:89436989-89437008 Msa0436100:intron 35.0%
!! TGGAAAACTGCTTTTACCAT+TGG - chr3_2:89437152-89437171 Msa0436100:intron 35.0%
!! ACTGCTTTTACCATTGGATA+TGG - chr3_2:89437158-89437177 Msa0436100:intron 35.0%
!! CTGCTTTTACCATTGGATAT+GGG - chr3_2:89437159-89437178 Msa0436100:intron 35.0%
! CGCTTCCTTAATATCTCTTT+TGG - chr3_2:89437221-89437240 Msa0436100:intron 35.0%
GGGAACCAAAAGAGATATTA+AGG + chr3_2:89437229-89437248 None:intergenic 35.0%
CAAACTTGGAATGCAATCTT+TGG - chr3_2:89437355-89437374 Msa0436100:intron 35.0%
! AGGAACTAGAAGTATAGTAC+AGG - chr3_2:89437432-89437451 Msa0436100:intron 35.0%
AACAACCAATGACAAAAAGC+AGG + chr3_2:89437523-89437542 None:intergenic 35.0%
TGACTTACTAATACATCTGC+CGG - chr3_2:89437568-89437587 Msa0436100:intron 35.0%
! GAAATATCTTTTGAACCCTC+TGG + chr3_2:89437619-89437638 None:intergenic 35.0%
TGTCTTTCTTTCACAGGAAA+TGG + chr3_2:89437652-89437671 None:intergenic 35.0%
GGACTATAAAACCCAAACAA+TGG + chr3_2:89437734-89437753 None:intergenic 35.0%
GTCTGCAACAATTATATGGA+TGG + chr3_2:89437755-89437774 None:intergenic 35.0%
! TTTTCACACTTGGATATTGC+TGG - chr3_2:89437779-89437798 Msa0436100:intron 35.0%
TGAAAATGCTCATTATGCTC+AGG + chr3_2:89437842-89437861 None:intergenic 35.0%
! TGAGCATAATGAGCATTTTC+AGG - chr3_2:89437841-89437860 Msa0436100:intron 35.0%
!!! TACTGTTGCATCTTTTTTGG+AGG - chr3_2:89437867-89437886 Msa0436100:intron 35.0%
!!! CATTTTATATTGTTGGTGGC+TGG + chr3_2:89437916-89437935 None:intergenic 35.0%
!!! TGTCCCTTTTGAGTTTTACA+CGG - chr3_2:89438006-89438025 Msa0436100:intron 35.0%
TACCCGTGTAAAACTCAAAA+GGG + chr3_2:89438012-89438031 None:intergenic 35.0%
ATACCCGTGTAAAACTCAAA+AGG + chr3_2:89438013-89438032 None:intergenic 35.0%
GTTAGTGTCCTGAATTTGTA+AGG - chr3_2:89438260-89438279 Msa0436100:intron 35.0%
ATTTCCCTCCTTACAAATTC+AGG + chr3_2:89438271-89438290 None:intergenic 35.0%
TGTGATCATGGTAGTCAAAT+TGG - chr3_2:89438624-89438643 Msa0436100:intron 35.0%
GTGATCATGGTAGTCAAATT+GGG - chr3_2:89438625-89438644 Msa0436100:intron 35.0%
ACTCACCTTCTATTCCTTTA+CGG + chr3_2:89438871-89438890 None:intergenic 35.0%
ATAGCTCCAAATTAACTGGT+TGG - chr3_2:89438902-89438921 Msa0436100:CDS 35.0%
ACAGCTCCAAATTAAATGGT+AGG - chr3_2:89438937-89438956 Msa0436100:CDS 35.0%
!!! CATTTTTTATGGAACAGTCC+TGG + chr3_2:89439090-89439109 None:intergenic 35.0%
CAGGACTGTTCCATAAAAAA+TGG - chr3_2:89439088-89439107 Msa0436100:CDS 35.0%
ATTTATTGGGATATGCATCG+TGG - chr3_2:89439199-89439218 Msa0436100:intron 35.0%
TTTATTGGGATATGCATCGT+GGG - chr3_2:89439200-89439219 Msa0436100:intron 35.0%
AAAAAGTGGTTGAACGATAC+AGG + chr3_2:89439312-89439331 None:intergenic 35.0%
TGGCTAGAATTCACCTTATA+AGG - chr3_2:89439462-89439481 Msa0436100:intron 35.0%
CACCTTATAAGGTGAATAAG+TGG - chr3_2:89439473-89439492 Msa0436100:CDS 35.0%
CCTTATAAGGTGAATAAGTG+GGG - chr3_2:89439475-89439494 Msa0436100:CDS 35.0%
! ACTTCCTCTTTTTCTCTCTA+CGG + chr3_2:89439748-89439767 None:intergenic 35.0%
GTGACCCGTCAAATATTATA+GGG + chr3_2:89439871-89439890 None:intergenic 35.0%
TGTGACCCGTCAAATATTAT+AGG + chr3_2:89439872-89439891 None:intergenic 35.0%
TACCGACCCATGTAAAAAAA+AGG - chr3_2:89439912-89439931 Msa0436100:intron 35.0%
ACCGACCCATGTAAAAAAAA+GGG - chr3_2:89439913-89439932 Msa0436100:intron 35.0%
!!! ACCCTTTTTTTTACATGGGT+CGG + chr3_2:89439917-89439936 None:intergenic 35.0%
CTAGATTGAATTGGGATACA+TGG - chr3_2:89440009-89440028 Msa0436100:CDS 35.0%
TACGATATGAAAACAGCCAT+GGG + chr3_2:89440087-89440106 None:intergenic 35.0%
ATACGATATGAAAACAGCCA+TGG + chr3_2:89440088-89440107 None:intergenic 35.0%
!! TGGCTGTTTTCATATCGTAT+CGG - chr3_2:89440088-89440107 Msa0436100:CDS 35.0%
!!! TGATTACTTTTTGTACAGGG+TGG - chr3_2:89440406-89440425 Msa0436100:CDS 35.0%
AAGCCAGAAATCAACATCAA+CGG + chr3_2:89440542-89440561 None:intergenic 35.0%
CAAATAAGATGCAGAAGTCT+TGG + chr3_2:89440618-89440637 None:intergenic 35.0%
CAAGACTTCTGCATCTTATT+TGG - chr3_2:89440616-89440635 Msa0436100:intron 35.0%
CTTATTTGGCAAAGATCCAA+TGG - chr3_2:89440630-89440649 Msa0436100:intron 35.0%
AGCAACGACTAATGATACTA+TGG + chr3_2:89440768-89440787 None:intergenic 35.0%
TGTTATGAGAAGAAGTTAGG+AGG - chr3_2:89441146-89441165 Msa0436100:CDS 35.0%
GAGGAAGGGAAATTGAAAAT+CGG - chr3_2:89441165-89441184 Msa0436100:CDS 35.0%
! ACTGTCTAGAAGTATGTTTC+TGG + chr3_2:89441545-89441564 None:intergenic 35.0%
TGCAAATCTGCTGCAATTAC+AGG - chr3_2:89435227-89435246 Msa0436100:three_prime_UTR 40.0%
GCAAATCTGCTGCAATTACA+GGG - chr3_2:89435228-89435247 Msa0436100:three_prime_UTR 40.0%
ATTTACCATTCTATCCTCCC+AGG - chr3_2:89435363-89435382 Msa0436100:three_prime_UTR 40.0%
GGGAAACAATGGTCAGAAAA+AGG + chr3_2:89435540-89435559 None:intergenic 40.0%
AACTTTGAGCACCTTAAGAG+TGG + chr3_2:89435609-89435628 None:intergenic 40.0%
ATTTGAACAAAGGCTTACGG+AGG + chr3_2:89435729-89435748 None:intergenic 40.0%
TCCGTAAGCCTTTGTTCAAA+TGG - chr3_2:89435728-89435747 Msa0436100:intron 40.0%
GCCATTTGAACAAAGGCTTA+CGG + chr3_2:89435732-89435751 None:intergenic 40.0%
! CACAGTTGTCTGTGAGTTTT+AGG - chr3_2:89435807-89435826 Msa0436100:CDS 40.0%
GGTTAAGTAGTTGCGAACAT+AGG - chr3_2:89435907-89435926 Msa0436100:CDS 40.0%
TATTATCTTCCTTGTGTCGC+AGG - chr3_2:89436141-89436160 Msa0436100:CDS 40.0%
ATGTCAGCAACACTTAACGA+AGG - chr3_2:89436241-89436260 Msa0436100:CDS 40.0%
AGCAACACTTAACGAAGGAA+AGG - chr3_2:89436246-89436265 Msa0436100:CDS 40.0%
GCAACACTTAACGAAGGAAA+GGG - chr3_2:89436247-89436266 Msa0436100:CDS 40.0%
ACTTAACGAAGGAAAGGGAA+AGG - chr3_2:89436252-89436271 Msa0436100:CDS 40.0%
! AAGAGGGAATATCTTTAGGG+CGG + chr3_2:89436318-89436337 None:intergenic 40.0%
GAATAAGTTGCCAAGGAAGA+GGG + chr3_2:89436334-89436353 None:intergenic 40.0%
AGAATAAGTTGCCAAGGAAG+AGG + chr3_2:89436335-89436354 None:intergenic 40.0%
GTAACTTTACCTAAAGGCCT+TGG - chr3_2:89436355-89436374 Msa0436100:intron 40.0%
! TCAGCTTGCGTAATTTTCTC+TGG + chr3_2:89436442-89436461 None:intergenic 40.0%
AATAGAGTCCTACACAAAGC+TGG - chr3_2:89436555-89436574 Msa0436100:intron 40.0%
ACAATTGGCAGGTATGAGAA+TGG + chr3_2:89436637-89436656 None:intergenic 40.0%
GGAGATTGAGATATCCCATT+GGG - chr3_2:89436708-89436727 Msa0436100:intron 40.0%
GAGATTGAGATATCCCATTG+GGG - chr3_2:89436709-89436728 Msa0436100:intron 40.0%
! AGAGCAAAGGAGAATTTTCC+AGG - chr3_2:89436779-89436798 Msa0436100:intron 40.0%
ATCACAGAAACAAGGTAACC+TGG + chr3_2:89436800-89436819 None:intergenic 40.0%
TAAACAGAATGAGCTCTTGG+TGG + chr3_2:89436947-89436966 None:intergenic 40.0%
GAGCTCATTCTGTTTACTAC+AGG - chr3_2:89436951-89436970 Msa0436100:intron 40.0%
TTTGTGGGGTGACTCAAAAA+AGG - chr3_2:89437003-89437022 Msa0436100:intron 40.0%
! TTTTCCAGCCACCAAAAAGT+GGG + chr3_2:89437139-89437158 None:intergenic 40.0%
TGGTTCCCCCATTAATGATT+TGG - chr3_2:89437241-89437260 Msa0436100:intron 40.0%
! GATTGACACTCTTGTTGTGA+AGG - chr3_2:89437265-89437284 Msa0436100:intron 40.0%
TTCACAGGAAATGGAACAGA+TGG + chr3_2:89437643-89437662 None:intergenic 40.0%
TCCTGTGAAAGAAAGACATG+AGG - chr3_2:89437654-89437673 Msa0436100:intron 40.0%
ACCTCATGTCTTTCTTTCAC+AGG + chr3_2:89437658-89437677 None:intergenic 40.0%
! GCAGACAAAGTTTTCACACT+TGG - chr3_2:89437769-89437788 Msa0436100:intron 40.0%
TACTCCCTCCATCTCATATT+AGG - chr3_2:89437983-89438002 Msa0436100:intron 40.0%
GACACCTAATATGAGATGGA+GGG + chr3_2:89437990-89438009 None:intergenic 40.0%
AAGGGACACCTAATATGAGA+TGG + chr3_2:89437994-89438013 None:intergenic 40.0%
!!! GTCCCTTTTGAGTTTTACAC+GGG - chr3_2:89438007-89438026 Msa0436100:intron 40.0%
!!! GACGACACCTATTTTTGAGA+CGG - chr3_2:89438230-89438249 Msa0436100:intron 40.0%
!!! ACACCTATTTTTGAGACGGA+GGG - chr3_2:89438234-89438253 Msa0436100:intron 40.0%
AGTGTCCTGAATTTGTAAGG+AGG - chr3_2:89438263-89438282 Msa0436100:intron 40.0%
GTGTCCTGAATTTGTAAGGA+GGG - chr3_2:89438264-89438283 Msa0436100:intron 40.0%
ACTAGCTGGATTTGTAAGGA+TGG - chr3_2:89438449-89438468 Msa0436100:intron 40.0%
TGGATTTGTAAGGATGGTGT+AGG - chr3_2:89438455-89438474 Msa0436100:intron 40.0%
AGACCTACTAGTTGTGATCA+TGG - chr3_2:89438612-89438631 Msa0436100:intron 40.0%
CTACCATGATCACAACTAGT+AGG + chr3_2:89438618-89438637 None:intergenic 40.0%
GAAACAGATCGTGTATGTGT+TGG - chr3_2:89438842-89438861 Msa0436100:intron 40.0%
GTAAAGGAATAGAAGGTGAG+TGG - chr3_2:89438870-89438889 Msa0436100:intron 40.0%
! AATAGAAGGTGAGTGGCTTT+TGG - chr3_2:89438877-89438896 Msa0436100:intron 40.0%
! ATAGAAGGTGAGTGGCTTTT+GGG - chr3_2:89438878-89438897 Msa0436100:intron 40.0%
GGGAATAGCTCCAAATTAAC+TGG - chr3_2:89438898-89438917 Msa0436100:CDS 40.0%
TATACTGGGTGTGATACTGA+TGG - chr3_2:89439240-89439259 Msa0436100:intron 40.0%
ATACTGGGTGTGATACTGAT+GGG - chr3_2:89439241-89439260 Msa0436100:intron 40.0%
GCATTGAGAAAACTCAAGCA+TGG - chr3_2:89439265-89439284 Msa0436100:intron 40.0%
CTCAAGCATGGTAGTCAAAT+CGG - chr3_2:89439277-89439296 Msa0436100:intron 40.0%
TCAAGCATGGTAGTCAAATC+GGG - chr3_2:89439278-89439297 Msa0436100:intron 40.0%
!! TTTTTGGTCAAGTAGCCTAG+TGG - chr3_2:89439442-89439461 Msa0436100:intron 40.0%
TAAGGTGAATTCTAGCCACT+AGG + chr3_2:89439460-89439479 None:intergenic 40.0%
CCCCACTTATTCACCTTATA+AGG + chr3_2:89439478-89439497 None:intergenic 40.0%
TCTCTGCTCATTCACTAATG+GGG + chr3_2:89439681-89439700 None:intergenic 40.0%
CTCTCTGCTCATTCACTAAT+GGG + chr3_2:89439682-89439701 None:intergenic 40.0%
TCTCTCTGCTCATTCACTAA+TGG + chr3_2:89439683-89439702 None:intergenic 40.0%
TAGACCGTAGAGAGAAAAAG+AGG - chr3_2:89439741-89439760 Msa0436100:CDS 40.0%
AGAGAGAAAAAGAGGAAGTG+TGG - chr3_2:89439749-89439768 Msa0436100:CDS 40.0%
! GAGAGAAAAAGAGGAAGTGT+GGG - chr3_2:89439750-89439769 Msa0436100:CDS 40.0%
CAAAACCCTAGAACAGAAAG+CGG - chr3_2:89439841-89439860 Msa0436100:CDS 40.0%
GTGTTTCACTTGCAGAAACT+GGG + chr3_2:89439966-89439985 None:intergenic 40.0%
CCTGCTATACATGGTCATTT+GGG - chr3_2:89440038-89440057 Msa0436100:CDS 40.0%
!! GGCTGTTTTCATATCGTATC+GGG - chr3_2:89440089-89440108 Msa0436100:CDS 40.0%
ATACGTATCGTGGGATACAT+GGG - chr3_2:89440112-89440131 Msa0436100:CDS 40.0%
AAAATCGACGTGTAAGGTGA+GGG + chr3_2:89440213-89440232 None:intergenic 40.0%
CCTTACAAAATCGACGTGTA+AGG + chr3_2:89440219-89440238 None:intergenic 40.0%
!!! CCTTACACGTCGATTTTGTA+AGG - chr3_2:89440216-89440235 Msa0436100:CDS 40.0%
!! TCATACTTAGATGGGCTGAT+GGG + chr3_2:89440336-89440355 None:intergenic 40.0%
!! TTCATACTTAGATGGGCTGA+TGG + chr3_2:89440337-89440356 None:intergenic 40.0%
ATCAGCCCATCTAAGTATGA+AGG - chr3_2:89440336-89440355 Msa0436100:CDS 40.0%
AGACACGACAACTAGAGAAA+AGG - chr3_2:89440371-89440390 Msa0436100:CDS 40.0%
GACACGACAACTAGAGAAAA+GGG - chr3_2:89440372-89440391 Msa0436100:CDS 40.0%
AGTTGATTACCTCTTCCCAT+TGG + chr3_2:89440649-89440668 None:intergenic 40.0%
GGTTCAAGCAACTATTCATC+AGG - chr3_2:89440741-89440760 Msa0436100:intron 40.0%
! TCTAGGACAGGTGATATTCA+AGG - chr3_2:89440829-89440848 Msa0436100:intron 40.0%
CTAGGACAGGTGATATTCAA+GGG - chr3_2:89440830-89440849 Msa0436100:intron 40.0%
!! CGAGCTATCAACTGATTTTC+TGG + chr3_2:89440866-89440885 None:intergenic 40.0%
GAAGACTGCAAAAATGTCAC+AGG + chr3_2:89440919-89440938 None:intergenic 40.0%
GACCTTGGGTAATATTTGAG+CGG + chr3_2:89440950-89440969 None:intergenic 40.0%
!! TACCCAAGGTCATTTTGGAA+TGG - chr3_2:89440959-89440978 Msa0436100:intron 40.0%
AGCCATTCCAAAATGACCTT+GGG + chr3_2:89440964-89440983 None:intergenic 40.0%
AAGCCATTCCAAAATGACCT+TGG + chr3_2:89440965-89440984 None:intergenic 40.0%
ATGAGAAGAAGTTAGGAGGA+AGG - chr3_2:89441150-89441169 Msa0436100:CDS 40.0%
TGAGAAGAAGTTAGGAGGAA+GGG - chr3_2:89441151-89441170 Msa0436100:CDS 40.0%
!!! TTAGCGATACTTGTTTTGCG+TGG - chr3_2:89441367-89441386 Msa0436100:CDS 40.0%
!!! TAGCGATACTTGTTTTGCGT+GGG - chr3_2:89441368-89441387 Msa0436100:CDS 40.0%
!!! TCAGTGAGAGCGTTTTGGTT+TGG - chr3_2:89435260-89435279 Msa0436100:three_prime_UTR 45.0%
ACTTACACGACGGTCAACTT+TGG + chr3_2:89435410-89435429 None:intergenic 45.0%
! GGGCATTGCCATTTGAACAA+AGG + chr3_2:89435739-89435758 None:intergenic 45.0%
TGTGTCCAGCCTAGCAATAT+GGG + chr3_2:89435761-89435780 None:intergenic 45.0%
ATGTGTCCAGCCTAGCAATA+TGG + chr3_2:89435762-89435781 None:intergenic 45.0%
TGAAGTTCCAGGTTTGAACC+CGG + chr3_2:89435789-89435808 None:intergenic 45.0%
ACAGACAACTGTGAAGTTCC+AGG + chr3_2:89435800-89435819 None:intergenic 45.0%
AGTTGCGAACATAGGCTTAG+AGG - chr3_2:89435915-89435934 Msa0436100:CDS 45.0%
GGAAAGGCGAAATCATCTTC+TGG - chr3_2:89436268-89436287 Msa0436100:CDS 45.0%
GCGAAATCATCTTCTGGTGT+TGG - chr3_2:89436274-89436293 Msa0436100:CDS 45.0%
TTAGGGCGGACAACTTCATA+GGG + chr3_2:89436304-89436323 None:intergenic 45.0%
! TTTAGGGCGGACAACTTCAT+AGG + chr3_2:89436305-89436324 None:intergenic 45.0%
TTTACCTAAAGGCCTTGGGA+AGG - chr3_2:89436360-89436379 Msa0436100:intron 45.0%
TTACCTAAAGGCCTTGGGAA+GGG - chr3_2:89436361-89436380 Msa0436100:intron 45.0%
TCTTTCTCCTTATCCCGTGA+AGG - chr3_2:89436498-89436517 Msa0436100:intron 45.0%
ATTGAGCGATTGGACCTTCA+CGG + chr3_2:89436515-89436534 None:intergenic 45.0%
TAGGACTCTATTCTTGCCTC+AGG + chr3_2:89436547-89436566 None:intergenic 45.0%
ATTGGCAGGTATGAGAATGG+AGG + chr3_2:89436634-89436653 None:intergenic 45.0%
AACTCTTTAGCAACGGCGAA+GGG + chr3_2:89436682-89436701 None:intergenic 45.0%
CCTCACCAACTCTTTAGCAA+CGG + chr3_2:89436689-89436708 None:intergenic 45.0%
!! CGTTGCTAAAGAGTTGGTGA+GGG - chr3_2:89436687-89436706 Msa0436100:intron 45.0%
GGGAGATTGAGATATCCCAT+TGG - chr3_2:89436707-89436726 Msa0436100:intron 45.0%
GATCTGTACATTGCCCCAAT+GGG + chr3_2:89436725-89436744 None:intergenic 45.0%
TGATCTGTACATTGCCCCAA+TGG + chr3_2:89436726-89436745 None:intergenic 45.0%
GCAGATGCACCTCTTACATA+TGG + chr3_2:89436899-89436918 None:intergenic 45.0%
! TAAGAGGTGCATCTGCCTTT+AGG - chr3_2:89436903-89436922 Msa0436100:intron 45.0%
CAGAACTTGAGATCGAACCT+CGG - chr3_2:89437111-89437130 Msa0436100:intron 45.0%
! GTTTTCCAGCCACCAAAAAG+TGG + chr3_2:89437140-89437159 None:intergenic 45.0%
AAGTGGCAACCCATATCCAA+TGG + chr3_2:89437171-89437190 None:intergenic 45.0%
CCAAACAAGAAGTCCTGAAG+TGG + chr3_2:89437188-89437207 None:intergenic 45.0%
CCACTTCAGGACTTCTTGTT+TGG - chr3_2:89437185-89437204 Msa0436100:intron 45.0%
! GACTTCTTGTTTGGAGTCGA+TGG - chr3_2:89437194-89437213 Msa0436100:intron 45.0%
AACCTGAAAGTTGCAAGCAC+CGG + chr3_2:89437590-89437609 None:intergenic 45.0%
!! TTTCAGGTTGTCTTGCCAGA+GGG - chr3_2:89437601-89437620 Msa0436100:intron 45.0%
TTCTTCTCTAGCACGACAAC+AGG + chr3_2:89437809-89437828 None:intergenic 45.0%
GGACACCTAATATGAGATGG+AGG + chr3_2:89437991-89438010 None:intergenic 45.0%
!!! GACACCTATTTTTGAGACGG+AGG - chr3_2:89438233-89438252 Msa0436100:intron 45.0%
ACTCCCTCCGTCTCAAAAAT+AGG + chr3_2:89438240-89438259 None:intergenic 45.0%
AAATCCAGCTAGTGCGTTGA+GGG + chr3_2:89438442-89438461 None:intergenic 45.0%
ACGCACTAGCTGGATTTGTA+AGG - chr3_2:89438445-89438464 Msa0436100:intron 45.0%
TAGGCTAGTACTACTGGGTT+GGG + chr3_2:89438557-89438576 None:intergenic 45.0%
AAGCCTAGGCTAGTACTACT+GGG + chr3_2:89438562-89438581 None:intergenic 45.0%
TAAGCCTAGGCTAGTACTAC+TGG + chr3_2:89438563-89438582 None:intergenic 45.0%
GTATGTGTTGGAAGCCGTAA+AGG - chr3_2:89438854-89438873 Msa0436100:intron 45.0%
GGAAGCCGTAAAGGAATAGA+AGG - chr3_2:89438863-89438882 Msa0436100:intron 45.0%
TGTAACCCATCAGCTATTGC+AGG + chr3_2:89438998-89439017 None:intergenic 45.0%
! CAAACACCCACGGTTTTCTT+GGG + chr3_2:89439030-89439049 None:intergenic 45.0%
CAAGAAAACCGTGGGTGTTT+GGG - chr3_2:89439029-89439048 Msa0436100:intron 45.0%
AAGAAAACCGTGGGTGTTTG+GGG - chr3_2:89439030-89439049 Msa0436100:intron 45.0%
TTATGGAACAGTCCTGGAAC+CGG + chr3_2:89439084-89439103 None:intergenic 45.0%
TTCAGTTGCAGAAACCAGGT+CGG + chr3_2:89439148-89439167 None:intergenic 45.0%
AGGGGGGATACTAACTATAC+TGG - chr3_2:89439225-89439244 Msa0436100:intron 45.0%
GGGGGGATACTAACTATACT+GGG - chr3_2:89439226-89439245 Msa0436100:intron 45.0%
ATTATTATATGCAGGGGCCG+GGG + chr3_2:89439516-89439535 None:intergenic 45.0%
CATTATTATATGCAGGGGCC+GGG + chr3_2:89439517-89439536 None:intergenic 45.0%
GCATTATTATATGCAGGGGC+CGG + chr3_2:89439518-89439537 None:intergenic 45.0%
! ACAAGAACGTGTGCAGCTTT+TGG - chr3_2:89439785-89439804 Msa0436100:CDS 45.0%
! CAAGAACGTGTGCAGCTTTT+GGG - chr3_2:89439786-89439805 Msa0436100:CDS 45.0%
GTCAACCGCTTTCTGTTCTA+GGG + chr3_2:89439849-89439868 None:intergenic 45.0%
ACATGGGTCGGTACTAGAAA+CGG + chr3_2:89439905-89439924 None:intergenic 45.0%
CGTGTTTCACTTGCAGAAAC+TGG + chr3_2:89439967-89439986 None:intergenic 45.0%
GCCTGCTATACATGGTCATT+TGG - chr3_2:89440037-89440056 Msa0436100:CDS 45.0%
CCCAAATGACCATGTATAGC+AGG + chr3_2:89440041-89440060 None:intergenic 45.0%
CCATGGGCAAATACGTATCA+GGG + chr3_2:89440071-89440090 None:intergenic 45.0%
GATACGTATCGTGGGATACA+TGG - chr3_2:89440111-89440130 Msa0436100:CDS 45.0%
TACGTATCGTGGGATACATG+GGG - chr3_2:89440113-89440132 Msa0436100:CDS 45.0%
AAATCGACGTGTAAGGTGAG+GGG + chr3_2:89440212-89440231 None:intergenic 45.0%
CAAAATCGACGTGTAAGGTG+AGG + chr3_2:89440214-89440233 None:intergenic 45.0%
!! CATACTTAGATGGGCTGATG+GGG + chr3_2:89440335-89440354 None:intergenic 45.0%
TCAACCGTCTTTCTATGCTC+AGG - chr3_2:89440513-89440532 Msa0436100:CDS 45.0%
CAACCGTCTTTCTATGCTCA+GGG - chr3_2:89440514-89440533 Msa0436100:CDS 45.0%
!! GAGCCGTTGATGTTGATTTC+TGG - chr3_2:89440536-89440555 Msa0436100:CDS 45.0%
TGCATGCATGTAGACAATGG+AGG + chr3_2:89440582-89440601 None:intergenic 45.0%
GTCTGCATGCATGTAGACAA+TGG + chr3_2:89440585-89440604 None:intergenic 45.0%
CATCGTTGCGTGATCTTTCT+AGG - chr3_2:89440812-89440831 Msa0436100:intron 45.0%
!! TTGCGTGATCTTTCTAGGAC+AGG - chr3_2:89440817-89440836 Msa0436100:intron 45.0%
CTCGTTGAAAGAGCTCACAA+AGG - chr3_2:89440882-89440901 Msa0436100:intron 45.0%
GGTAATATTTGAGCGGCTTG+TGG + chr3_2:89440943-89440962 None:intergenic 45.0%
AGCCGCTCAAATATTACCCA+AGG - chr3_2:89440945-89440964 Msa0436100:intron 45.0%
GGTGGAGGAAGTAATTGCTA+AGG - chr3_2:89441073-89441092 Msa0436100:intron 45.0%
TGCTAAGGAGAGAGATTTGC+AGG - chr3_2:89441088-89441107 Msa0436100:intron 45.0%
! AGATTTGCAGGAGAAGCGTA+TGG - chr3_2:89441100-89441119 Msa0436100:intron 45.0%
!! AAACAAAAATAAAATAATTA+TGG + chr3_2:89441049-89441068 None:intergenic 5.0%
GCTGCAATTACAGGGATCTC+TGG - chr3_2:89435236-89435255 Msa0436100:three_prime_UTR 50.0%
!!! CTGGTTCAGTGAGAGCGTTT+TGG - chr3_2:89435255-89435274 Msa0436100:three_prime_UTR 50.0%
TGGTAAGGATGAGATCGGAG+AGG + chr3_2:89435390-89435409 None:intergenic 50.0%
CACGACGGTCAACTTTGGTA+AGG + chr3_2:89435405-89435424 None:intergenic 50.0%
!! CCTTAAGAGTGGTAGTGGTG+CGG + chr3_2:89435598-89435617 None:intergenic 50.0%
GAGCACCTTAAGAGTGGTAG+TGG + chr3_2:89435603-89435622 None:intergenic 50.0%
TGTCCAGCCTAGCAATATGG+GGG + chr3_2:89435759-89435778 None:intergenic 50.0%
GTGTCCAGCCTAGCAATATG+GGG + chr3_2:89435760-89435779 None:intergenic 50.0%
CTAGGCTGGACACATTCATC+CGG - chr3_2:89435767-89435786 Msa0436100:intron 50.0%
TAGGCTGGACACATTCATCC+GGG - chr3_2:89435768-89435787 Msa0436100:intron 50.0%
CATTCATCCGGGTTCAAACC+TGG - chr3_2:89435779-89435798 Msa0436100:intron 50.0%
CATTCTCTACCTGCGACACA+AGG + chr3_2:89436153-89436172 None:intergenic 50.0%
TCAAACTTTCGCCCTTCCCA+AGG + chr3_2:89436375-89436394 None:intergenic 50.0%
GAAGGGCGAAAGTTTGACGT+TGG - chr3_2:89436378-89436397 Msa0436100:intron 50.0%
GATTGGACCTTCACGGGATA+AGG + chr3_2:89436508-89436527 None:intergenic 50.0%
TTGAGCGATTGGACCTTCAC+GGG + chr3_2:89436514-89436533 None:intergenic 50.0%
CAACTCTTTAGCAACGGCGA+AGG + chr3_2:89436683-89436702 None:intergenic 50.0%
CTTCGCCGTTGCTAAAGAGT+TGG - chr3_2:89436681-89436700 Msa0436100:intron 50.0%
!! CCGTTGCTAAAGAGTTGGTG+AGG - chr3_2:89436686-89436705 Msa0436100:intron 50.0%
CTGCTGCAGACTTGACTATC+AGG - chr3_2:89436868-89436887 Msa0436100:intron 50.0%
TGCACCTCTTACATATGGCC+TGG + chr3_2:89436894-89436913 None:intergenic 50.0%
CTTGGCAGTAAGACGCCTAA+AGG + chr3_2:89436921-89436940 None:intergenic 50.0%
GTCACCCCACAAACTAGAAG+TGG + chr3_2:89436996-89437015 None:intergenic 50.0%
GTGGGGTGACTCAAAAAAGG+TGG - chr3_2:89437006-89437025 Msa0436100:intron 50.0%
!! GAACCTCGGTACCCACTTTT+TGG - chr3_2:89437125-89437144 Msa0436100:intron 50.0%
! TGGATATGGGTTGCCACTTC+AGG - chr3_2:89437172-89437191 Msa0436100:intron 50.0%
!! CTTTCAGGTTGTCTTGCCAG+AGG - chr3_2:89437600-89437619 Msa0436100:intron 50.0%
CAAATCCAGCTAGTGCGTTG+AGG + chr3_2:89438443-89438462 None:intergenic 50.0%
!! CTTTTGGTGGGTGACTCGAA+TGG + chr3_2:89438525-89438544 None:intergenic 50.0%
CATTCGAGTCACCCACCAAA+AGG - chr3_2:89438523-89438542 Msa0436100:intron 50.0%
CTAGGCTAGTACTACTGGGT+TGG + chr3_2:89438558-89438577 None:intergenic 50.0%
! CAACCCAGTAGTACTAGCCT+AGG - chr3_2:89438556-89438575 Msa0436100:intron 50.0%
GTTCGCCTGCAATAGCTGAT+GGG - chr3_2:89438990-89439009 Msa0436100:intron 50.0%
AACCTGACCCAAGAAAACCG+TGG - chr3_2:89439020-89439039 Msa0436100:intron 50.0%
ACCTGACCCAAGAAAACCGT+GGG - chr3_2:89439021-89439040 Msa0436100:intron 50.0%
! CCAAACACCCACGGTTTTCT+TGG + chr3_2:89439031-89439050 None:intergenic 50.0%
CCAAGAAAACCGTGGGTGTT+TGG - chr3_2:89439028-89439047 Msa0436100:intron 50.0%
CAGAAAACCCCAAACACCCA+CGG + chr3_2:89439040-89439059 None:intergenic 50.0%
!! GGTGTTTGGGGTTTTCTGGA+GGG - chr3_2:89439042-89439061 Msa0436100:intron 50.0%
TATGGAACAGTCCTGGAACC+GGG + chr3_2:89439083-89439102 None:intergenic 50.0%
TCAGTTGCAGAAACCAGGTC+GGG + chr3_2:89439147-89439166 None:intergenic 50.0%
TGGGATATGCATCGTGGGAT+AGG - chr3_2:89439205-89439224 Msa0436100:intron 50.0%
GGGATATGCATCGTGGGATA+GGG - chr3_2:89439206-89439225 Msa0436100:intron 50.0%
GGATATGCATCGTGGGATAG+GGG - chr3_2:89439207-89439226 Msa0436100:intron 50.0%
GATATGCATCGTGGGATAGG+GGG - chr3_2:89439208-89439227 Msa0436100:intron 50.0%
ATATGCATCGTGGGATAGGG+GGG - chr3_2:89439209-89439228 Msa0436100:intron 50.0%
! AGGTGAATAAGTGGGGTGTC+CGG - chr3_2:89439482-89439501 Msa0436100:CDS 50.0%
TGAGCATAGCTCAGTTGGCA+GGG + chr3_2:89439546-89439565 None:intergenic 50.0%
GGGGCAGAACCCTTAGAATT+TGG + chr3_2:89439662-89439681 None:intergenic 50.0%
GAGCAGAGAGAAACAGAGCA+TGG - chr3_2:89439692-89439711 Msa0436100:intron 50.0%
GGTCAACCGCTTTCTGTTCT+AGG + chr3_2:89439850-89439869 None:intergenic 50.0%
! TTTGACGGGTCACACAATCC+CGG - chr3_2:89439878-89439897 Msa0436100:intron 50.0%
CATGGGTCGGTACTAGAAAC+GGG + chr3_2:89439904-89439923 None:intergenic 50.0%
TCACTTGCAGAAACTGGGTC+AGG + chr3_2:89439961-89439980 None:intergenic 50.0%
TGGGATACGCCTGCTATACA+TGG - chr3_2:89440029-89440048 Msa0436100:CDS 50.0%
CCCTGATACGTATTTGCCCA+TGG - chr3_2:89440068-89440087 Msa0436100:CDS 50.0%
GCCATGGGCAAATACGTATC+AGG + chr3_2:89440072-89440091 None:intergenic 50.0%
TCGTATCGGGATACGTATCG+TGG - chr3_2:89440102-89440121 Msa0436100:CDS 50.0%
CGTATCGGGATACGTATCGT+GGG - chr3_2:89440103-89440122 Msa0436100:CDS 50.0%
TACTCTTGCGCCTGTATTGC+AGG - chr3_2:89440478-89440497 Msa0436100:CDS 50.0%
GCTCCCTGAGCATAGAAAGA+CGG + chr3_2:89440520-89440539 None:intergenic 50.0%
GGCAAAGATCCAATGGGAAG+AGG - chr3_2:89440637-89440656 Msa0436100:intron 50.0%
GAGGACCTGGGAGGATAGAA+TGG + chr3_2:89435371-89435390 None:intergenic 55.0%
GATGAGATCGGAGAGGACCT+GGG + chr3_2:89435383-89435402 None:intergenic 55.0%
CCGCACCACTACCACTCTTA+AGG - chr3_2:89435595-89435614 Msa0436100:CDS 55.0%
GGCAATGCCCCCATATTGCT+AGG - chr3_2:89435749-89435768 Msa0436100:intron 55.0%
ATGCCCCCATATTGCTAGGC+TGG - chr3_2:89435753-89435772 Msa0436100:intron 55.0%
GTGTCGCAGGTAGAGAATGC+AGG - chr3_2:89436154-89436173 Msa0436100:CDS 55.0%
GCAGACTTGACTATCAGGCC+AGG - chr3_2:89436873-89436892 Msa0436100:intron 55.0%
CAGGCCAGGCCATATGTAAG+AGG - chr3_2:89436887-89436906 Msa0436100:intron 55.0%
! ATGAGCTCTTGGTGGCAGCT+TGG + chr3_2:89436939-89436958 None:intergenic 55.0%
! CCACCAAAAAGTGGGTACCG+AGG + chr3_2:89437131-89437150 None:intergenic 55.0%
!!! CCTCGGTACCCACTTTTTGG+TGG - chr3_2:89437128-89437147 Msa0436100:intron 55.0%
!!! GGTACCCACTTTTTGGTGGC+TGG - chr3_2:89437132-89437151 Msa0436100:intron 55.0%
TGCCGGTGCTTGCAACTTTC+AGG - chr3_2:89437585-89437604 Msa0436100:intron 55.0%
! GGGTGCATGGACCTTTTGGT+GGG + chr3_2:89438537-89438556 None:intergenic 55.0%
! TGGGTGCATGGACCTTTTGG+TGG + chr3_2:89438538-89438557 None:intergenic 55.0%
! GGTTGGGTGCATGGACCTTT+TGG + chr3_2:89438541-89438560 None:intergenic 55.0%
! GTACTACTGGGTTGGGTGCA+TGG + chr3_2:89438550-89438569 None:intergenic 55.0%
GGTTCGCCTGCAATAGCTGA+TGG - chr3_2:89438989-89439008 Msa0436100:intron 55.0%
! ACCCACGGTTTTCTTGGGTC+AGG + chr3_2:89439025-89439044 None:intergenic 55.0%
!! CGTGGGTGTTTGGGGTTTTC+TGG - chr3_2:89439038-89439057 Msa0436100:intron 55.0%
!! GGGTGTTTGGGGTTTTCTGG+AGG - chr3_2:89439041-89439060 Msa0436100:intron 55.0%
! GGTGAATAAGTGGGGTGTCC+GGG - chr3_2:89439483-89439502 Msa0436100:CDS 55.0%
! GTGAATAAGTGGGGTGTCCG+GGG - chr3_2:89439484-89439503 Msa0436100:CDS 55.0%
GTGAGCATAGCTCAGTTGGC+AGG + chr3_2:89439547-89439566 None:intergenic 55.0%
CCTCGTGAGCATAGCTCAGT+TGG + chr3_2:89439551-89439570 None:intergenic 55.0%
CCAACTGAGCTATGCTCACG+AGG - chr3_2:89439548-89439567 Msa0436100:CDS 55.0%
! AGAAACTGGGTCAGGTTGCG+CGG + chr3_2:89439953-89439972 None:intergenic 55.0%
!! CTTAGATGGGCTGATGGGGT+TGG + chr3_2:89440331-89440350 None:intergenic 55.0%
GGATGAGATCGGAGAGGACC+TGG + chr3_2:89435384-89435403 None:intergenic 60.0%
TCGCCCTTCCCAAGGCCTTT+AGG + chr3_2:89436367-89436386 None:intergenic 60.0%
CATGGCGGTGCTCAGAGCAA+AGG - chr3_2:89436766-89436785 Msa0436100:intron 60.0%
GCATCCCTCAACGCACTAGC+TGG - chr3_2:89438435-89438454 Msa0436100:intron 60.0%
GGTGGGTGACTCGAATGGAC+AGG + chr3_2:89438520-89438539 None:intergenic 60.0%
GGGTCATGCAAAACCCGACC+CGG - chr3_2:89439062-89439081 Msa0436100:intron 60.0%
AACAGTCCTGGAACCGGGTC+GGG + chr3_2:89439078-89439097 None:intergenic 60.0%
GAACAGTCCTGGAACCGGGT+CGG + chr3_2:89439079-89439098 None:intergenic 60.0%
GTCGGTACTAGAAACGGGCC+GGG + chr3_2:89439899-89439918 None:intergenic 60.0%
GGTCGGTACTAGAAACGGGC+CGG + chr3_2:89439900-89439919 None:intergenic 60.0%
GAGATCGGAGAGGACCTGGG+AGG + chr3_2:89435380-89435399 None:intergenic 65.0%
GCAAAACCCGACCCGGTTCC+AGG - chr3_2:89439069-89439088 Msa0436100:intron 65.0%
! CTGGTTCGCACATCCCGACC+TGG - chr3_2:89439131-89439150 Msa0436100:CDS 65.0%
GGTGTCCGGGGTTCGAACCC+CGG - chr3_2:89439496-89439515 Msa0436100:CDS 70.0%
! CTGGGTCAGGTTGCGCGGTC+CGG + chr3_2:89439948-89439967 None:intergenic 70.0%
AGGGGCCGGGGTTCGAACCC+CGG + chr3_2:89439504-89439523 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 89435169 89441590 89435169 ID=Msa0436100;Name=Msa0436100
chr3_2 mRNA 89435169 89441590 89435169 ID=Msa0436100-mRNA-1;Parent=Msa0436100;Name=Msa0436100-mRNA-1;_AED=0.14;_eAED=0.14;_QI=147|0.88|0.9|1|0.88|1|10|325|632
chr3_2 exon 89435169 89435685 89435169 ID=Msa0436100-mRNA-1:exon:26575;Parent=Msa0436100-mRNA-1
chr3_2 exon 89435793 89436017 89435793 ID=Msa0436100-mRNA-1:exon:26574;Parent=Msa0436100-mRNA-1
chr3_2 exon 89436101 89436307 89436101 ID=Msa0436100-mRNA-1:exon:26573;Parent=Msa0436100-mRNA-1
chr3_2 exon 89438897 89438986 89438897 ID=Msa0436100-mRNA-1:exon:26572;Parent=Msa0436100-mRNA-1
chr3_2 exon 89439084 89439152 89439084 ID=Msa0436100-mRNA-1:exon:26571;Parent=Msa0436100-mRNA-1
chr3_2 exon 89439473 89439649 89439473 ID=Msa0436100-mRNA-1:exon:26570;Parent=Msa0436100-mRNA-1
chr3_2 exon 89439735 89439882 89439735 ID=Msa0436100-mRNA-1:exon:26569;Parent=Msa0436100-mRNA-1
chr3_2 exon 89439959 89440596 89439959 ID=Msa0436100-mRNA-1:exon:26568;Parent=Msa0436100-mRNA-1
chr3_2 exon 89441143 89441187 89441143 ID=Msa0436100-mRNA-1:exon:26567;Parent=Msa0436100-mRNA-1
chr3_2 exon 89441336 89441590 89441336 ID=Msa0436100-mRNA-1:exon:26566;Parent=Msa0436100-mRNA-1
chr3_2 five_prime_UTR 89441444 89441590 89441444 ID=Msa0436100-mRNA-1:five_prime_utr;Parent=Msa0436100-mRNA-1
chr3_2 CDS 89441336 89441443 89441336 ID=Msa0436100-mRNA-1:cds;Parent=Msa0436100-mRNA-1
chr3_2 CDS 89441143 89441187 89441143 ID=Msa0436100-mRNA-1:cds;Parent=Msa0436100-mRNA-1
chr3_2 CDS 89439959 89440596 89439959 ID=Msa0436100-mRNA-1:cds;Parent=Msa0436100-mRNA-1
chr3_2 CDS 89439735 89439882 89439735 ID=Msa0436100-mRNA-1:cds;Parent=Msa0436100-mRNA-1
chr3_2 CDS 89439473 89439649 89439473 ID=Msa0436100-mRNA-1:cds;Parent=Msa0436100-mRNA-1
chr3_2 CDS 89439084 89439152 89439084 ID=Msa0436100-mRNA-1:cds;Parent=Msa0436100-mRNA-1
chr3_2 CDS 89438897 89438986 89438897 ID=Msa0436100-mRNA-1:cds;Parent=Msa0436100-mRNA-1
chr3_2 CDS 89436101 89436307 89436101 ID=Msa0436100-mRNA-1:cds;Parent=Msa0436100-mRNA-1
chr3_2 CDS 89435793 89436017 89435793 ID=Msa0436100-mRNA-1:cds;Parent=Msa0436100-mRNA-1
chr3_2 CDS 89435494 89435685 89435494 ID=Msa0436100-mRNA-1:cds;Parent=Msa0436100-mRNA-1
chr3_2 three_prime_UTR 89435169 89435493 89435169 ID=Msa0436100-mRNA-1:three_prime_utr;Parent=Msa0436100-mRNA-1
Gene Sequence

>Msa0436100

ATGATGACGATGATGAGGTTGAATCTGCTTCTTTCGTTTGTATTCACATTTACCATTCTATCCTCCCAGGTCCTCTCCGATCTCATCCTTACCAAAGTTGACCGTCGTATTGATCTGTCATCACAAATTGTCCGCACCACTACCACTCTTAAGGTAGAGAATGCAGGATCTGATGTTGTTTCAGAAATCTTGTTGACCTTTCCTGATAACCATGTAAAGCACTTAGCATACATGTCAGCAACACTTAACGAAGGAAAGGGAAAGGCGAAATCATCTTCTGGTGTTGGTTTACCCTATGAAGTTGTCCGCCCTAAAGATATTCCCTCTTCCTTGGCAACTTATTCTGTAACTTTACCTAAAGGCCTTGGGAAGGGCGAAAGTTTGACGTTGGACATCTTGACAGTTTTTACCCATATATTGCAACCATTTCCAGAGAAAATTACGCAAGCTGACATTCAACTTCTGCTGTTTCAAGAGAGTGCACAATATCTTTCTCCTTATCCCGTGAAGGTCCAATCGCTCAATGTTAAATTACCTGAGGCAAGAATAGAGTCCTACACAAAGCTGGAAAATACAAAACTTCAGGGATCTGAATTGAAATATGGTCCATATGAGAATCTTCCTCCATTCTCATACCTGCCAATTGTTATCCATTTTGAGAATAATCAGCCCTTCGCCGTTGCTAAAGAGTTGGTGAGGGAGATTGAGATATCCCATTGGGGCAATGTACAGATCACAGAGCATTATAATCTTGTTCATGGCGGTGCTCAGAGCAAAGGAGAATTTTCCAGACTTGACTATCAGGCCAGGCCATATGTAAGAGGTGCATCTGCCTTTAGGCGTCTTACTGCCAAGCTGCCACCAAGAGCTCATTCTGTTTACTACAGGGATGAAATCGGCAATATTTCCACTTCTAGTTTGTGGGGTGACTCAAAAAAGACAGAACTTGAGATCGAACCTCGGTACCCACTTTTTGGTGGCTGGAAAACTGCTTTTACCATTGGATATGGGTTGCCACTTCAGGACTTCTTGTTTGGAGTCGATGGAAAGCGCTTCCTTAATATCTCTTTTGGTTCCCCCATTAATGATTTGGTGATTGACACTCTTGTTGTGAAGGTTGTCTTGCCAGAGGGTTCAAAAGATATTTCACCATCTGTTCCATTTCCTGTGAAAGAAAGACATGAGACAAAGTTTTCACACTTGGATATTGCTGGTAGACCTGTTGTCGTGCTAGAGAAGAACAACGCTGTGCCTGAGCATAATGAGCATTTTCAGTATTTGACTTTAGTAGGTCTACTGATTACTCTTGCGCCTGTATTGCAGGTCTATTATAAGTTCAACCGTCTTTCTATGCTCAGGGAGCCGTTGATGTTGATTTCTGGCTTTTTCTTTCTATTTCTTGCCTCCATTGTCTACATGCATGCAGACTTATCGATCTCCAAGACTTCTGCATCTTATTTGGCAAAGATCCAATGGGAAGAGGTTCAAGCAACTATTCATCAGGTCCATAGTATCATTAGTCGTTGCTTAACAACACACGACAAGCTAGAAGCATCGTTGCGTGATCTTTCTAGGACAGGTGATATTCAAGGGTGTAAAGCAACCAGAAAATCAGTTGATAGCTCGTTGAAAGAGCTCACAAAGGAGTTGAAATCACCTGTGACATTTTTGCAGTCTTCTCCACAAGCCGCTCAAATATTACCCAAGGTGGAGGAAGTAATTGCTAAGGAGAGAGATTTGCAGGAGAAGCGTATGGCAAAACACACTACTGTTGTTGATTGTTATGAGAAGAAGTTAGGAGGAAGGGAAATTGAAAATCGGATTGCTTCACATCAGCAGAAAATTACATCTCTGAAACAAGAGATTTATGATCTTATGGACTTGATCGATGAGATATGA
Protein sequence

>Msa0436100

MMTMMRLNLLLSFVFTFTILSSQVLSDLILTKVDRRIDLSSQIVRTTTTLKVENAGSDVVSEILLTFPDNHVKHLAYMSATLNEGKGKAKSSSGVGLPYEVVRPKDIPSSLATYSVTLPKGLGKGESLTLDILTVFTHILQPFPEKITQADIQLLLFQESAQYLSPYPVKVQSLNVKLPEARIESYTKLENTKLQGSELKYGPYENLPPFSYLPIVIHFENNQPFAVAKELVREIEISHWGNVQITEHYNLVHGGAQSKGEFSRLDYQARPYVRGASAFRRLTAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPLFGGWKTAFTIGYGLPLQDFLFGVDGKRFLNISFGSPINDLVIDTLVVKVVLPEGSKDISPSVPFPVKERHETKFSHLDIAGRPVVVLEKNNAVPEHNEHFQYLTLVGLLITLAPVLQVYYKFNRLSMLREPLMLISGFFFLFLASIVYMHADLSISKTSASYLAKIQWEEVQATIHQVHSIISRCLTTHDKLEASLRDLSRTGDIQGCKATRKSVDSSLKELTKELKSPVTFLQSSPQAAQILPKVEEVIAKERDLQEKRMAKHTTVVDCYEKKLGGREIENRIASHQQKITSLKQEIYDLMDLIDEI*